CmaCh03G004140 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G004140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	C2H2-type domain-containing protein
Location	Cma_Chr03: 4469547 .. 4470014 (+)
RNA-Seq Expression	CmaCh03G004140
Synteny	CmaCh03G004140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGAACTCCAAACTATGCTGGAAGATGTGGGAAAACAATAACAAAAAGAAGAGGAATTTGAGCACTACAATCAACGAAGCTTCATGGGAAGAACAAGCCTTTGCTGAGGATGCTGCTGCTGGTCATCTCGGCGGCTGCGTTTGGCCCCCTAGATCCTACTCTTGCAGCTTCTGCAAAAGGGAATTCCGGTCGGCTCAAGCTCTGGGTGGCCACATGAATGTCCACCGCCGTGATCGGGCTAGATTAAAGCATCAATCTTTCAAACCCCAAATCGATCTTCAACAACACCCTAAAACAAGCCATGATTTCCTCAAGGATCAGGCCGATGTTTGTTGTAAGAGAAAGAGACCCGATCATGTGCCCTCCACGCTGGCTTTCCTTTTCCGATCAGAGGTAATTGGACTTACCCATGCCTCCGTTGAGGATTTGGATCTTGAGCTCCGCCTTGGCGGTGCCAGATAA

mRNA sequence

ATGGAAATGAACTCCAAACTATGCTGGAAGATGTGGGAAAACAATAACAAAAAGAAGAGGAATTTGAGCACTACAATCAACGAAGCTTCATGGGAAGAACAAGCCTTTGCTGAGGATGCTGCTGCTGGTCATCTCGGCGGCTGCGTTTGGCCCCCTAGATCCTACTCTTGCAGCTTCTGCAAAAGGGAATTCCGGTCGGCTCAAGCTCTGGGTGGCCACATGAATGTCCACCGCCGTGATCGGGCTAGATTAAAGCATCAATCTTTCAAACCCCAAATCGATCTTCAACAACACCCTAAAACAAGCCATGATTTCCTCAAGGATCAGGCCGATGTTTGTTGTAAGAGAAAGAGACCCGATCATGTGCCCTCCACGCTGGCTTTCCTTTTCCGATCAGAGGTAATTGGACTTACCCATGCCTCCGTTGAGGATTTGGATCTTGAGCTCCGCCTTGGCGGTGCCAGATAA

Coding sequence (CDS)

ATGGAAATGAACTCCAAACTATGCTGGAAGATGTGGGAAAACAATAACAAAAAGAAGAGGAATTTGAGCACTACAATCAACGAAGCTTCATGGGAAGAACAAGCCTTTGCTGAGGATGCTGCTGCTGGTCATCTCGGCGGCTGCGTTTGGCCCCCTAGATCCTACTCTTGCAGCTTCTGCAAAAGGGAATTCCGGTCGGCTCAAGCTCTGGGTGGCCACATGAATGTCCACCGCCGTGATCGGGCTAGATTAAAGCATCAATCTTTCAAACCCCAAATCGATCTTCAACAACACCCTAAAACAAGCCATGATTTCCTCAAGGATCAGGCCGATGTTTGTTGTAAGAGAAAGAGACCCGATCATGTGCCCTCCACGCTGGCTTTCCTTTTCCGATCAGAGGTAATTGGACTTACCCATGCCTCCGTTGAGGATTTGGATCTTGAGCTCCGCCTTGGCGGTGCCAGATAA

Protein sequence

MEMNSKLCWKMWENNNKKKRNLSTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQADVCCKRKRPDHVPSTLAFLFRSEVIGLTHASVEDLDLELRLGGAR

Homology

[Close]

BLAST of CmaCh03G004140 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-20
Identity = 48/68 (70.59%), Postives = 51/68 (75.00%), Query Frame = 0


Query: 32  EEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKP 91
           EE+AFA     G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK QS  P
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 92  QIDLQQHP 100
               Q  P
Sbjct: 92  SSTDQATP 99

[Close]

BLAST of CmaCh03G004140 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.0e-20
Identity = 47/58 (81.03%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 28 EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK 86
          E+SWEE AFAED AAG L    WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRARLK
Sbjct: 16 ESSWEELAFAEDDAAGSL----WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLK 69

[Close]

BLAST of CmaCh03G004140 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-15
Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 44  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTS 103
           +L G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+         LQQ P +S
Sbjct: 36  YLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR---------LQQSPSSS 85

[Close]

BLAST of CmaCh03G004140 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.8e-13
Identity = 30/36 (83.33%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 50 WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK 86
          WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+
Sbjct: 44 WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR 79

[Close]

BLAST of CmaCh03G004140 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 53 RSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQID 95
          RSY CSFC R F +AQALGGHMN+HRRDRA+L+ +  +   D
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDNKD 74

[Close]

BLAST of CmaCh03G004140 vs. ExPASy TrEMBL
Match: A0A6J1GFU1 (transcriptional regulator TAC1-like OS=Cucurbita moschata OX=3662 GN=LOC111453565 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.7e-80
Identity = 145/155 (93.55%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MEMNSKLCWKMWENNNKKKRNLSTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC 60
           MEM+SKLCWK+WEN NKKK+NL+TTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC
Sbjct: 1   MEMDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC 60

Query: 61  KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQADVCCKRKRPD 120
           KREFRSAQALGGHMNVHRRDRARLKHQSFKPQID QQHPKTSHDFLKDQA VC KRKRPD
Sbjct: 61  KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPD 120

Query: 121 HVPSTLAFLFRSEVIGLTHASVEDLDLELRLGGAR 156
           HVPST+AFLFRSEVIGLTH SVEDLDLELRLGGAR
Sbjct: 121 HVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 155

[Close]

BLAST of CmaCh03G004140 vs. ExPASy TrEMBL
Match: A0A6J1EUY7 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111438197 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.0e-44
Identity = 114/220 (51.82%), Postives = 125/220 (56.82%), Query Frame = 0


Query: 1   MEMNSKLCWKMWENNNK---KKRNLSTTIN----------EASWEEQAFAEDAAAGHLGG 60
           MEM  K CW MWEN N+   K  N  TT +          + SWEEQAFA+D AAG LGG
Sbjct: 1   MEMEPKPCWMMWENKNQNENKNENRLTTASDHLNNKASSFDDSWEEQAFADD-AAGRLGG 60

Query: 61  CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQ--------------- 120
           CVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKH+SFKPQ               
Sbjct: 61  CVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKNNPFT 120

Query: 121 --IDLQQHPKT-------------------------------------SHDFLKDQADVC 153
             IDL QHP +                                     + D  KD A VC
Sbjct: 121 SLIDLPQHPSSQFVCDENLAFNPNPKSSQNSVDESDHKWRQSLDLSIKTTDLFKDDA-VC 180

[Close]

BLAST of CmaCh03G004140 vs. ExPASy TrEMBL
Match: A0A6J1HNB1 (probable transcriptional regulator RABBIT EARS OS=Cucurbita maxima OX=3661 GN=LOC111466204 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.8e-44
Identity = 114/220 (51.82%), Postives = 126/220 (57.27%), Query Frame = 0


Query: 1   MEMNSKLCWKMWENNNKKK---RNLSTTIN----------EASWEEQAFAEDAAAGHLGG 60
           MEM  K CW MWEN N+ K   +N  TT +          + SWEEQAFA+D AAG LGG
Sbjct: 1   MEMEPKPCWMMWENKNQNKNQNQNRLTTASDNHNNKASSFDDSWEEQAFADD-AAGRLGG 60

Query: 61  CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQ--------------- 120
           CVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKH+SFKPQ               
Sbjct: 61  CVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKNNPFT 120

Query: 121 --IDLQQHPKT-------------------------------------SHDFLKDQADVC 153
             IDL QHP +                                     + D  KD A VC
Sbjct: 121 SLIDLPQHPSSQFDCDENLAFNPNPKSSQNSVEESDHKWRQSLDLSTKTTDLFKDDA-VC 180

[Close]

BLAST of CmaCh03G004140 vs. ExPASy TrEMBL
Match: A0A1S3BJY1 (probable transcriptional regulator RABBIT EARS OS=Cucumis melo OX=3656 GN=LOC103490450 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.8e-43
Identity = 117/239 (48.95%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 3   MNSKLCWKMWENNNKKKRNLSTTIN-------------------EASWEEQAFAEDAAAG 62
           M  K CW MWE   KKK+NL TT +                   + SWEEQAFA+D AAG
Sbjct: 1   MEPKRCWMMWE-KKKKKKNLITTSSDHHFLQATTTTIKSSSSSFDDSWEEQAFADD-AAG 60

Query: 63  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQI---------- 122
            LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKH+SFKPQI          
Sbjct: 61  RLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPPTL 120

Query: 123 -----------------------------------------------------DLQQHPK 156
                                                                DL Q   
Sbjct: 121 QQQVCDDNLVFNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTATLHKWHQSSDLSQKTS 180

[Close]

BLAST of CmaCh03G004140 vs. ExPASy TrEMBL
Match: A0A5A7STW0 (Putative transcriptional regulator RABBIT EARS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00660 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.8e-43
Identity = 117/239 (48.95%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 3   MNSKLCWKMWENNNKKKRNLSTTIN-------------------EASWEEQAFAEDAAAG 62
           M  K CW MWE   KKK+NL TT +                   + SWEEQAFA+D AAG
Sbjct: 1   MEPKRCWMMWE-KKKKKKNLITTSSDHHFLQATTTTIKSSSSSFDDSWEEQAFADD-AAG 60

Query: 63  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQI---------- 122
            LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKH+SFKPQI          
Sbjct: 61  RLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPPTL 120

Query: 123 -----------------------------------------------------DLQQHPK 156
                                                                DL Q   
Sbjct: 121 QQQVCDDNLVFNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTATLHKWHQSSDLSQKTS 180

[Close]

BLAST of CmaCh03G004140 vs. NCBI nr
Match: KAG6603640.1 (putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.9 bits (790), Expect = 2.4e-80
Identity = 146/155 (94.19%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MEMNSKLCWKMWENNNKKKRNLSTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC 60
           MEM+SKLCWK+WEN NKKK+NL+TTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC
Sbjct: 1   MEMDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC 60

Query: 61  KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQADVCCKRKRPD 120
           KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQA VC KRKRPD
Sbjct: 61  KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQAAVCTKRKRPD 120

Query: 121 HVPSTLAFLFRSEVIGLTHASVEDLDLELRLGGAR 156
           HVPST+AFLFRSEVIGLTH SVEDLDLELRLGGAR
Sbjct: 121 HVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 155

[Close]

BLAST of CmaCh03G004140 vs. NCBI nr
Match: XP_022950470.1 (transcriptional regulator TAC1-like [Cucurbita moschata])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 145/155 (93.55%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MEMNSKLCWKMWENNNKKKRNLSTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC 60
           MEM+SKLCWK+WEN NKKK+NL+TTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC
Sbjct: 1   MEMDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC 60

Query: 61  KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQADVCCKRKRPD 120
           KREFRSAQALGGHMNVHRRDRARLKHQSFKPQID QQHPKTSHDFLKDQA VC KRKRPD
Sbjct: 61  KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPD 120

Query: 121 HVPSTLAFLFRSEVIGLTHASVEDLDLELRLGGAR 156
           HVPST+AFLFRSEVIGLTH SVEDLDLELRLGGAR
Sbjct: 121 HVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 155

[Close]

BLAST of CmaCh03G004140 vs. NCBI nr
Match: XP_023544692.1 (transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 143/155 (92.26%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MEMNSKLCWKMWENNNKKKRNLSTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFC 60
           MEM+SK CW MWEN NKKKRNL+T+IN+ASWEE+AFAEDAAAGHLGGCVWPPRSYSCSFC
Sbjct: 1   MEMDSKPCWMMWENKNKKKRNLTTSINQASWEEEAFAEDAAAGHLGGCVWPPRSYSCSFC 60

Query: 61  KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQADVCCKRKRPD 120
           KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQA VC KRKRPD
Sbjct: 61  KREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQAAVCTKRKRPD 120

Query: 121 HVPSTLAFLFRSEVIGLTHASVEDLDLELRLGGAR 156
           HVP+TLAFLFRSEVIGLTH SVEDLDLELRLGGAR
Sbjct: 121 HVPATLAFLFRSEVIGLTHTSVEDLDLELRLGGAR 155

[Close]

BLAST of CmaCh03G004140 vs. NCBI nr
Match: KAG7033822.1 (putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 143/153 (93.46%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 3   MNSKLCWKMWENNNKKKRNLSTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 62
           M+SKLCWK+WEN NKKK+NL+TTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR
Sbjct: 1   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 60

Query: 63  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQADVCCKRKRPDHV 122
           EFRSAQALGGHMNVHRRDRARLKHQSFKPQID QQHPKTSHDFLKDQA VC KRKRPDHV
Sbjct: 61  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 120

Query: 123 PSTLAFLFRSEVIGLTHASVEDLDLELRLGGAR 156
           PST+AFLFRSEVIGLTH SVEDLDLELRLGGAR
Sbjct: 121 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 153

[Close]

BLAST of CmaCh03G004140 vs. NCBI nr
Match: XP_022931921.1 (transcriptional regulator SUPERMAN-like [Cucurbita moschata])

HSP 1 Score: 187.6 bits (475), Expect = 8.2e-44
Identity = 114/220 (51.82%), Postives = 125/220 (56.82%), Query Frame = 0


Query: 1   MEMNSKLCWKMWENNNK---KKRNLSTTIN----------EASWEEQAFAEDAAAGHLGG 60
           MEM  K CW MWEN N+   K  N  TT +          + SWEEQAFA+D AAG LGG
Sbjct: 1   MEMEPKPCWMMWENKNQNENKNENRLTTASDHLNNKASSFDDSWEEQAFADD-AAGRLGG 60

Query: 61  CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQ--------------- 120
           CVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKH+SFKPQ               
Sbjct: 61  CVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKNNPFT 120

Query: 121 --IDLQQHPKT-------------------------------------SHDFLKDQADVC 153
             IDL QHP +                                     + D  KD A VC
Sbjct: 121 SLIDLPQHPSSQFVCDENLAFNPNPKSSQNSVDESDHKWRQSLDLSIKTTDLFKDDA-VC 180

[Close]

BLAST of CmaCh03G004140 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 48/68 (70.59%), Postives = 51/68 (75.00%), Query Frame = 0


Query: 32  EEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKP 91
           EE+AFA     G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK QS  P
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 92  QIDLQQHP 100
               Q  P
Sbjct: 92  SSTDQATP 99

[Close]

BLAST of CmaCh03G004140 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 99.0 bits (245), Expect = 3.6e-21
Identity = 47/58 (81.03%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 28 EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK 86
          E+SWEE AFAED AAG L    WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRARLK
Sbjct: 16 ESSWEELAFAEDDAAGSL----WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLK 69

[Close]

BLAST of CmaCh03G004140 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-17
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 12 WENNNKKKRNLSTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALG 71
          W  N  K   L    ++ SWE +AF +D   G++ G  WPPRSY+C+FC+REFRSAQALG
Sbjct: 6  WMWNPNKIEELED--DDESWEVKAFEQD-TKGNISGTTWPPRSYTCNFCRREFRSAQALG 65

Query: 72 GHMNVHRRDRA 83
          GHMNVHRRDRA
Sbjct: 66 GHMNVHRRDRA 73

[Close]

BLAST of CmaCh03G004140 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 44  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTS 103
           +L G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+         LQQ P +S
Sbjct: 36  YLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR---------LQQSPSSS 85

[Close]

BLAST of CmaCh03G004140 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 75.1 bits (183), Expect = 5.5e-14
Identity = 30/36 (83.33%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 50 WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK 86
          WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+
Sbjct: 44 WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR 79

The following BLAST results are available for this feature:

BLAST of CmaCh03G004140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHS9	3.0e-20	70.59	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
O80942	5.0e-20	81.03	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q38895	2.9e-15	69.49	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9SLB8	7.8e-13	83.33	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q9SR34	9.9e-08	61.90	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of CmaCh03G004140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFU1	7.7e-80	93.55	transcriptional regulator TAC1-like OS=Cucurbita moschata OX=3662 GN=LOC11145356...	[more]
A0A6J1EUY7	4.0e-44	51.82	transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HNB1	6.8e-44	51.82	probable transcriptional regulator RABBIT EARS OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3BJY1	9.8e-43	48.95	probable transcriptional regulator RABBIT EARS OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7STW0	9.8e-43	48.95	Putative transcriptional regulator RABBIT EARS OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of CmaCh03G004140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603640.1	2.4e-80	94.19	putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma ...	[more]
XP_022950470.1	1.6e-79	93.55	transcriptional regulator TAC1-like [Cucurbita moschata]	[more]
XP_023544692.1	1.8e-78	92.26	transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo]	[more]
KAG7033822.1	2.3e-78	93.46	putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma ...	[more]
XP_022931921.1	8.2e-44	51.82	transcriptional regulator SUPERMAN-like [Cucurbita moschata]	[more]

BLAST of CmaCh03G004140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06070.1	2.1e-21	70.59	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	3.6e-21	81.03	zinc-finger protein 10	[more]
AT4G17810.1	3.1e-17	59.15	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	2.0e-16	69.49	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	5.5e-14	83.33	zinc finger protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 55..77 e-value: 0.006 score: 25.8
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 57..77
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 55..82 score: 11.239817
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 55..79 e-value: 5.7E-7 score: 29.4
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 51..117 e-value: 3.6E-6 score: 28.7
None	No IPR available	PANTHER	PTHR45801:SF68	CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEIN	coord: 1..120
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 1..120
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 52..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G004140.1	CmaCh03G004140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane