CmaCh03G003210 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G003210
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	PRA1 family protein
Location	Cma_Chr03: 4036030 .. 4036647 (+)
RNA-Seq Expression	CmaCh03G003210
Synteny	CmaCh03G003210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCCTCTTCTCCGGCCATCCTCCCCGTTTCCAATTCCGAATCACAACCTCAAATCCCTCTTTCCTCATTCGCCAGCCACCTTTTCCTCTCCCTCCGTCACGCCTTCTCCCGCCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCAGAGTCCCTCTCCGAAGCCACACTCCGCATCCGCAAGAACTACACCTATTTCCGCGTTAATTATTTCGCGATTATAGCCCTAATTCTTGCGTTTTCATTTTTCTCAAATCCTTCGTCTCTGTTCCTCTTGATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCTTCCGATCAGCCGCTTGTTCTGTTCGGCCGGTTATTCAGAGACAGCGAGATCTTGATTGGCCTTGTTGTTTTCACCGCCTGTATTATCTTCCTCACCAGCGTCGGATCCGTTCTTGTTTCGTCCCTCACCGCCGGTGCCGCTGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTGTTCCTTGATGAACAGGAAGTGAACTCCACTGGATTTCTCGGTTTATTCGCCGGCGCCCCCTCTGCTGCCGCTGCCACCGCTCCTTCCGGCGCGTAA

mRNA sequence

ATGCCGTCCTCTTCTCCGGCCATCCTCCCCGTTTCCAATTCCGAATCACAACCTCAAATCCCTCTTTCCTCATTCGCCAGCCACCTTTTCCTCTCCCTCCGTCACGCCTTCTCCCGCCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCAGAGTCCCTCTCCGAAGCCACACTCCGCATCCGCAAGAACTACACCTATTTCCGCGTTAATTATTTCGCGATTATAGCCCTAATTCTTGCGTTTTCATTTTTCTCAAATCCTTCGTCTCTGTTCCTCTTGATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCTTCCGATCAGCCGCTTGTTCTGTTCGGCCGGTTATTCAGAGACAGCGAGATCTTGATTGGCCTTGTTGTTTTCACCGCCTGTATTATCTTCCTCACCAGCGTCGGATCCGTTCTTGTTTCGTCCCTCACCGCCGGTGCCGCTGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTGTTCCTTGATGAACAGGAAGTGAACTCCACTGGATTTCTCGGTTTATTCGCCGGCGCCCCCTCTGCTGCCGCTGCCACCGCTCCTTCCGGCGCGTAA

Coding sequence (CDS)

ATGCCGTCCTCTTCTCCGGCCATCCTCCCCGTTTCCAATTCCGAATCACAACCTCAAATCCCTCTTTCCTCATTCGCCAGCCACCTTTTCCTCTCCCTCCGTCACGCCTTCTCCCGCCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCAGAGTCCCTCTCCGAAGCCACACTCCGCATCCGCAAGAACTACACCTATTTCCGCGTTAATTATTTCGCGATTATAGCCCTAATTCTTGCGTTTTCATTTTTCTCAAATCCTTCGTCTCTGTTCCTCTTGATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCTTCCGATCAGCCGCTTGTTCTGTTCGGCCGGTTATTCAGAGACAGCGAGATCTTGATTGGCCTTGTTGTTTTCACCGCCTGTATTATCTTCCTCACCAGCGTCGGATCCGTTCTTGTTTCGTCCCTCACCGCCGGTGCCGCTGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTGTTCCTTGATGAACAGGAAGTGAACTCCACTGGATTTCTCGGTTTATTCGCCGGCGCCCCCTCTGCTGCCGCTGCCACCGCTCCTTCCGGCGCGTAA

Protein sequence

MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQEVNSTGFLGLFAGAPSAAAATAPSGA

Homology

[Close]

BLAST of CmaCh03G003210 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-53
Identity = 116/206 (56.31%), Postives = 153/206 (74.27%), Query Frame = 0


Query: 3   SSSPAILPVSNSE--SQPQIPLSSFASHLFL-----SLRHAFSRRRPWPELLDRSAFSKP 62
           SSSPAILPV+N +  +Q Q P++S A   FL     SLR + S+RRPW EL+DRS+F++P
Sbjct: 2   SSSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARP 61

Query: 63  ESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSD 122
           +SL+++  RIRKN  YF+VNY AI++L+LAFS  S+P SL +L++LL SW+FLYLFR SD
Sbjct: 62  DSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSD 121

Query: 123 QPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLF 182
           QPLVLFGR F D E L+GLV+ T  ++F+TSVGS+L S+LT G A+VC HGA R PDDLF
Sbjct: 122 QPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLF 181

Query: 183 LDEQEVNSTGFLGLFAGAPSAAAATA 202
           LDEQE  + G L     + + +AA +
Sbjct: 182 LDEQEPANAGLLSFIGNSAATSAAAS 207

[Close]

BLAST of CmaCh03G003210 vs. ExPASy Swiss-Prot
Match: O80915 (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-52
Identity = 112/212 (52.83%), Postives = 149/212 (70.28%), Query Frame = 0


Query: 1   MPSSSPAILPVSNS-----------ESQPQI---PLSSFASHLFLSLRHAFSRRRPWPEL 60
           M SS+P +LP+SN            ESQP I      +F + +  ++++  S+RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWI 120
            DRSA SKPES+S+A +RIRKNY+YF+VNY  +   I+ FS  ++P SL  L+ LL+SW+
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHG 180
           FLYLFRP+DQP+VLFGR F D E L  L++F+  +IFLT VGSVLVS++  G A++CAHG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 ALRSPDDLFLDEQEVNSTGFLGLFAGAPSAAA 199
           A R+P+DLFLDEQE  +TGFL    GA S+AA
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAA 212

[Close]

BLAST of CmaCh03G003210 vs. ExPASy Swiss-Prot
Match: Q9LYN0 (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.3e-51
Identity = 111/202 (54.95%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 4   SSPAILPVSNS---ESQPQI---PLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPES 63
           ++P  LPV+N    +SQP I      +F S L  S+R   S+RRPW EL+DRS+ ++PES
Sbjct: 2   ATPPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPES 61

Query: 64  LSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQP 123
           L++A  RIRKN  YF+VNY AI++L+LAFS FS+P SL +LI LL  W+FLYLFRPSDQP
Sbjct: 62  LTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQP 121

Query: 124 LVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLD 183
           LV+FGR F D E L+ LV+ T  ++F+TSVGS+L S+L  G A+VC HGA   PDDLFLD
Sbjct: 122 LVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLD 181

Query: 184 EQEVNSTGFLGLFAGAPSAAAA 200
           EQE  + G L    G+ ++AAA
Sbjct: 182 EQEPANAGLLSFLGGSATSAAA 203

[Close]

BLAST of CmaCh03G003210 vs. ExPASy Swiss-Prot
Match: Q9M012 (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.8e-49
Identity = 113/223 (50.67%), Postives = 151/223 (67.71%), Query Frame = 0


Query: 1   MPSSSPAILPVSNS---------------ESQPQIPLSSFASHLFLSLRHAFSRRRPWPE 60
           M S++P +LP+S +               ESQP + + +F + +  ++    SR RPW E
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPV-VRAFVNGVTETVCGGLSRSRPWSE 60

Query: 61  LLDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSW 120
           LLDRSAF+KP+SLSEA  R RKN +YFRVNY  I+ALIL FS  ++P SL LL+ L +SW
Sbjct: 61  LLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASW 120

Query: 121 IFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAH 180
           +FLYLFRPSD+PL+LFGR F + E L GL++ T  +IF TSVGSVL+S+L  G A +C H
Sbjct: 121 LFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVH 180

Query: 181 GALRSPDDLFLDEQEVNSTGFLGLF------AGAPSAAAATAP 203
           GA R+PDDLFLDEQ+  ++GFL         + APSA++A +P
Sbjct: 181 GAFRAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASP 222

[Close]

BLAST of CmaCh03G003210 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.8e-48
Identity = 109/208 (52.40%), Postives = 144/208 (69.23%), Query Frame = 0


Query: 4   SSPAILPVSNSE---SQPQIPLS-----SFASHLFLSLRHAFSRRRPWPELLDRSAFSKP 63
           ++P  LP+S+     SQ Q P+S     +F S L  S+R + S+RRPW EL+DRSA S+P
Sbjct: 3   ANPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRP 62

Query: 64  ESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSD 123
           ESL++A  RIR+N  YF+VNY  I++L+LA S  S+P SL +L+ L  +WIFLYLFRPSD
Sbjct: 63  ESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSD 122

Query: 124 QPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLF 183
           QPLV+ GR F D E L  LV+ T  ++FLTSVGS+L S+L  G  +VC HGA R P+DLF
Sbjct: 123 QPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLF 182

Query: 184 LDEQEVNSTGFLGLFAGAPSAAAATAPS 204
           LD+QE  +TG L   +GA ++AA  A S
Sbjct: 183 LDDQEPANTGLLSFLSGAATSAAVAAAS 210

[Close]

BLAST of CmaCh03G003210 vs. ExPASy TrEMBL
Match: A0A6J1IPN2 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAATAPSGA 206
           VNSTGFLGLFAGAPSAAAATAPSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAAATAPSGA 205

[Close]

BLAST of CmaCh03G003210 vs. ExPASy TrEMBL
Match: A0A6J1GD57 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTAC+IFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAATAPSGA 206
           VNSTGFLGLFAGAPSAAA+ APSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAASAAPSGA 205

[Close]

BLAST of CmaCh03G003210 vs. ExPASy TrEMBL
Match: A0A5D3CIC6 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00310 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.1e-89
Identity = 177/203 (87.19%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           M S SPAILP+SN +SQP IPLSSF+SHL LSLRHAFSRRRPWPELLDRSAFSKPESL+E
Sbjct: 1   MQSPSPAILPISNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLTE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGL+VFTAC++F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAATAPS 204
           VNSTGFLG+FAG PS+++A APS
Sbjct: 181 VNSTGFLGIFAGPPSSSSAAAPS 203

[Close]

BLAST of CmaCh03G003210 vs. ExPASy TrEMBL
Match: A0A1S3CMI9 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.1e-89
Identity = 177/203 (87.19%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           M S SPAILP+SN +SQP IPLSSF+SHL LSLRHAFSRRRPWPELLDRSAFSKPESL+E
Sbjct: 1   MQSPSPAILPISNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLTE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGL+VFTAC++F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAATAPS 204
           VNSTGFLG+FAG PS+++A APS
Sbjct: 181 VNSTGFLGIFAGPPSSSSAAAPS 203

[Close]

BLAST of CmaCh03G003210 vs. ExPASy TrEMBL
Match: A0A0A0KXP8 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.7e-87
Identity = 174/201 (86.57%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 3   SSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSEAT 62
           S+SP ILP+SN +SQPQIPLSSF+SHL LSLRHAFSRRRPWPELLDRSAFSKPESLSEAT
Sbjct: 4   SASPVILPISNPQSQPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLSEAT 63

Query: 63  LRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVLFG 122
           LRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVLFG
Sbjct: 64  LRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVLFG 123

Query: 123 RLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQEVN 182
           R FRDSEILIGLVVFTAC++FLTSVGSVLVS+ TAG AVVCAHGALRSPDDLFLDEQEVN
Sbjct: 124 RHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDLFLDEQEVN 183

Query: 183 STGFLGLFAGAPSAAAATAPS 204
           +TGFLG+FAGAPS++++++ S
Sbjct: 184 TTGFLGIFAGAPSSSSSSSSS 204

[Close]

BLAST of CmaCh03G003210 vs. NCBI nr
Match: XP_022978285.1 (PRA1 family protein B2-like [Cucurbita maxima])

HSP 1 Score: 379.0 bits (972), Expect = 2.5e-101
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAATAPSGA 206
           VNSTGFLGLFAGAPSAAAATAPSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAAATAPSGA 205

[Close]

BLAST of CmaCh03G003210 vs. NCBI nr
Match: XP_022949813.1 (PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033749.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.6 bits (963), Expect = 2.8e-100
Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTAC+IFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAATAPSGA 206
           VNSTGFLGLFAGAPSAAA+ APSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAASAAPSGA 205

[Close]

BLAST of CmaCh03G003210 vs. NCBI nr
Match: XP_023544736.1 (PRA1 family protein B2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.7 bits (953), Expect = 4.1e-99
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASH+FLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTAC+IFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAAT-APSGA 206
           VNSTGFLGLFAGAPSAAAA+ APSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAAASAAPSGA 206

[Close]

BLAST of CmaCh03G003210 vs. NCBI nr
Match: XP_008464234.1 (PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family protein B2 [Cucumis melo var. makuwa] >TYK10948.1 PRA1 family protein B2 [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 8.5e-89
Identity = 177/203 (87.19%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           M S SPAILP+SN +SQP IPLSSF+SHL LSLRHAFSRRRPWPELLDRSAFSKPESL+E
Sbjct: 1   MQSPSPAILPISNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLTE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGL+VFTAC++F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAATAPS 204
           VNSTGFLG+FAG PS+++A APS
Sbjct: 181 VNSTGFLGIFAGPPSSSSAAAPS 203

[Close]

BLAST of CmaCh03G003210 vs. NCBI nr
Match: KAE8649576.1 (hypothetical protein Csa_021551 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 3.6e-87
Identity = 174/201 (86.57%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 3   SSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSEAT 62
           S+SP ILP+SN +SQPQIPLSSF+SHL LSLRHAFSRRRPWPELLDRSAFSKPESLSEAT
Sbjct: 105 SASPVILPISNPQSQPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLSEAT 164

Query: 63  LRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVLFG 122
           LRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVLFG
Sbjct: 165 LRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVLFG 224

Query: 123 RLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQEVN 182
           R FRDSEILIGLVVFTAC++FLTSVGSVLVS+ TAG AVVCAHGALRSPDDLFLDEQEVN
Sbjct: 225 RHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDLFLDEQEVN 284

Query: 183 STGFLGLFAGAPSAAAATAPS 204
           +TGFLG+FAGAPS++++++ S
Sbjct: 285 TTGFLGIFAGAPSSSSSSSSS 305

[Close]

BLAST of CmaCh03G003210 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 210.3 bits (534), Expect = 1.5e-54
Identity = 116/206 (56.31%), Postives = 153/206 (74.27%), Query Frame = 0


Query: 3   SSSPAILPVSNSE--SQPQIPLSSFASHLFL-----SLRHAFSRRRPWPELLDRSAFSKP 62
           SSSPAILPV+N +  +Q Q P++S A   FL     SLR + S+RRPW EL+DRS+F++P
Sbjct: 2   SSSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARP 61

Query: 63  ESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSD 122
           +SL+++  RIRKN  YF+VNY AI++L+LAFS  S+P SL +L++LL SW+FLYLFR SD
Sbjct: 62  DSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSD 121

Query: 123 QPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLF 182
           QPLVLFGR F D E L+GLV+ T  ++F+TSVGS+L S+LT G A+VC HGA R PDDLF
Sbjct: 122 QPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLF 181

Query: 183 LDEQEVNSTGFLGLFAGAPSAAAATA 202
           LDEQE  + G L     + + +AA +
Sbjct: 182 LDEQEPANAGLLSFIGNSAATSAAAS 207

[Close]

BLAST of CmaCh03G003210 vs. TAIR 10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4 )

HSP 1 Score: 205.7 bits (522), Expect = 3.6e-53
Identity = 112/212 (52.83%), Postives = 149/212 (70.28%), Query Frame = 0


Query: 1   MPSSSPAILPVSNS-----------ESQPQI---PLSSFASHLFLSLRHAFSRRRPWPEL 60
           M SS+P +LP+SN            ESQP I      +F + +  ++++  S+RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWI 120
            DRSA SKPES+S+A +RIRKNY+YF+VNY  +   I+ FS  ++P SL  L+ LL+SW+
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHG 180
           FLYLFRP+DQP+VLFGR F D E L  L++F+  +IFLT VGSVLVS++  G A++CAHG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 ALRSPDDLFLDEQEVNSTGFLGLFAGAPSAAA 199
           A R+P+DLFLDEQE  +TGFL    GA S+AA
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAA 212

[Close]

BLAST of CmaCh03G003210 vs. TAIR 10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-52
Identity = 111/202 (54.95%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 4   SSPAILPVSNS---ESQPQI---PLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPES 63
           ++P  LPV+N    +SQP I      +F S L  S+R   S+RRPW EL+DRS+ ++PES
Sbjct: 2   ATPPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPES 61

Query: 64  LSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQP 123
           L++A  RIRKN  YF+VNY AI++L+LAFS FS+P SL +LI LL  W+FLYLFRPSDQP
Sbjct: 62  LTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQP 121

Query: 124 LVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLD 183
           LV+FGR F D E L+ LV+ T  ++F+TSVGS+L S+L  G A+VC HGA   PDDLFLD
Sbjct: 122 LVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLD 181

Query: 184 EQEVNSTGFLGLFAGAPSAAAA 200
           EQE  + G L    G+ ++AAA
Sbjct: 182 EQEPANAGLLSFLGGSATSAAA 203

[Close]

BLAST of CmaCh03G003210 vs. TAIR 10
Match: AT3G56110.2 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-52
Identity = 111/202 (54.95%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 4   SSPAILPVSNS---ESQPQI---PLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPES 63
           ++P  LPV+N    +SQP I      +F S L  S+R   S+RRPW EL+DRS+ ++PES
Sbjct: 2   ATPPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPES 61

Query: 64  LSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQP 123
           L++A  RIRKN  YF+VNY AI++L+LAFS FS+P SL +LI LL  W+FLYLFRPSDQP
Sbjct: 62  LTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQP 121

Query: 124 LVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLD 183
           LV+FGR F D E L+ LV+ T  ++F+TSVGS+L S+L  G A+VC HGA   PDDLFLD
Sbjct: 122 LVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLD 181

Query: 184 EQEVNSTGFLGLFAGAPSAAAA 200
           EQE  + G L    G+ ++AAA
Sbjct: 182 EQEPANAGLLSFLGGSATSAAA 203

[Close]

BLAST of CmaCh03G003210 vs. TAIR 10
Match: AT5G01640.1 (prenylated RAB acceptor 1.B5 )

HSP 1 Score: 195.3 bits (495), Expect = 4.9e-50
Identity = 113/223 (50.67%), Postives = 151/223 (67.71%), Query Frame = 0


Query: 1   MPSSSPAILPVSNS---------------ESQPQIPLSSFASHLFLSLRHAFSRRRPWPE 60
           M S++P +LP+S +               ESQP + + +F + +  ++    SR RPW E
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPV-VRAFVNGVTETVCGGLSRSRPWSE 60

Query: 61  LLDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSW 120
           LLDRSAF+KP+SLSEA  R RKN +YFRVNY  I+ALIL FS  ++P SL LL+ L +SW
Sbjct: 61  LLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASW 120

Query: 121 IFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAH 180
           +FLYLFRPSD+PL+LFGR F + E L GL++ T  +IF TSVGSVL+S+L  G A +C H
Sbjct: 121 LFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVH 180

Query: 181 GALRSPDDLFLDEQEVNSTGFLGLF------AGAPSAAAATAP 203
           GA R+PDDLFLDEQ+  ++GFL         + APSA++A +P
Sbjct: 181 GAFRAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASP 222

The following BLAST results are available for this feature:

BLAST of CmaCh03G003210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIY7	2.1e-53	56.31	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
O80915	5.1e-52	52.83	PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1	[more]
Q9LYN0	4.3e-51	54.95	PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1	[more]
Q9M012	6.8e-49	50.67	PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1	[more]
Q9FLB6	5.8e-48	52.40	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]

BLAST of CmaCh03G003210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPN2	1.2e-101	100.00	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1	[more]
A0A6J1GD57	1.4e-100	98.54	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1	[more]
A0A5D3CIC6	4.1e-89	87.19	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G...	[more]
A0A1S3CMI9	4.1e-89	87.19	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1	[more]
A0A0A0KXP8	1.7e-87	86.57	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1	[more]

BLAST of CmaCh03G003210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978285.1	2.5e-101	100.00	PRA1 family protein B2-like [Cucurbita maxima]	[more]
XP_022949813.1	2.8e-100	98.54	PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family prote...	[more]
XP_023544736.1	4.1e-99	98.06	PRA1 family protein B2-like [Cucurbita pepo subsp. pepo]	[more]
XP_008464234.1	8.5e-89	87.19	PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family prote...	[more]
KAE8649576.1	3.6e-87	86.57	hypothetical protein Csa_021551 [Cucumis sativus]	[more]

BLAST of CmaCh03G003210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40380.1	1.5e-54	56.31	prenylated RAB acceptor 1.B2	[more]
AT2G38360.1	3.6e-53	52.83	prenylated RAB acceptor 1.B4	[more]
AT3G56110.1	3.0e-52	54.95	prenylated RAB acceptor 1.B1	[more]
AT3G56110.2	3.0e-52	54.95	prenylated RAB acceptor 1.B1	[more]
AT5G01640.1	4.9e-50	50.67	prenylated RAB acceptor 1.B5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 36..179 e-value: 2.5E-46 score: 156.9
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..201
None	No IPR available	PANTHER	PTHR19317:SF34	PRA1 FAMILY PROTEIN-RELATED	coord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G003210.1	CmaCh03G003210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane