CmaCh03G003200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G003200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	macrophage migration inhibitory factor homolog
Location	Cma_Chr03: 4033310 .. 4033794 (+)
RNA-Seq Expression	CmaCh03G003200
Synteny	CmaCh03G003200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCTCTAAACTCCTCCTTCTCTCTCCTCTCCATAATAATCCCCATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCTGCCACAACCTCCGCCGTCTCCTCCATTATCGGCAAACCCGAGAATGTAAACCATACTTTGTCTTCCATTACAGTCGACGCCTCTATTATATTTATCTTTTATTATTATAGACAAATATTCTTAATTTATTTTGTTTTTTTGGACAGTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCATTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACCATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCTGCGAGATTCGTTCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

mRNA sequence

CCCTCTCTAAACTCCTCCTTCTCTCTCCTCTCCATAATAATCCCCATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCTGCCACAACCTCCGCCGTCTCCTCCATTATCGGCAAACCCGAGAATTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCATTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACCATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCTGCGAGATTCGTTCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

Coding sequence (CDS)

ATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCTGCCACAACCTCCGCCGTCTCCTCCATTATCGGCAAACCCGAGAATTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCATTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACCATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCTGCGAGATTCGTTCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

Protein sequence

MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAFAEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL

Homology

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BLAST of CmaCh03G003200 vs. ExPASy Swiss-Prot
Match: P81748 (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 7.1e-08
Identity = 34/102 (33.33%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP    STNV      S     +T+  ++ ++GKPE+YV V + G   I+FGG   PA F
Sbjct: 1   MPIFTFSTNVPSENI-SVDFLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHD 103
            +++S+GG+  E  R   A +   L + L +P  R  +   D
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVD 101

[Close]

BLAST of CmaCh03G003200 vs. ExPASy Swiss-Prot
Match: P81529 (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-06
Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 1  MPCLYISTNVDLAGADSAAIFAATTSA-VSSIIGKPENYVMVLLKGSVAISFGGNKEPAA 60
          MP   ++TN+     D  + F ++TSA V +I+ KP +YV V +     +SFGG+ +PAA
Sbjct: 1  MPIFTLNTNI--KATDVPSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAA 60

Query: 61 FAEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVL 99
          F  ++S+GGI     R   A +   L +KL +P  R  +
Sbjct: 61 FGTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYI 97

[Close]

BLAST of CmaCh03G003200 vs. ExPASy Swiss-Prot
Match: P91850 (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 51.2 bits (121), Expect = 8.7e-06
Identity = 30/105 (28.57%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP   I TN+    + S+A     ++ V+  +GKPE+YV + + G  A+ FGG+++P A 
Sbjct: 1   MPYFTIDTNIP-QNSISSAFLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTA 106
             + S+G +  +V       +  +L ++L +P  R  ++  D  A
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEA 104

[Close]

BLAST of CmaCh03G003200 vs. ExPASy Swiss-Prot
Match: P80177 (Macrophage migration inhibitory factor OS=Bos taurus OX=9913 GN=MIF PE=1 SV=6)

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-04
Identity = 29/105 (27.62%), Postives = 47/105 (44.76%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP   ++TNV  A      + +  T  ++   GKP  Y+ V +     ++FGG+ EP A 
Sbjct: 1   MPMFVVNTNVPRASVPD-GLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTA 106
             + S+G I     R     +  +L E+L + P R  +   D  A
Sbjct: 61  CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104

[Close]

BLAST of CmaCh03G003200 vs. ExPASy Swiss-Prot
Match: Q1ZZU7 (Macrophage migration inhibitory factor OS=Ovis aries OX=9940 GN=MIF PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-04
Identity = 29/105 (27.62%), Postives = 47/105 (44.76%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP   ++TNV  A      + +  T  ++   GKP  Y+ V +     ++FGG+ EP A 
Sbjct: 1   MPMFVVNTNVPRASVPD-GLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTA 106
             + S+G I     R     +  +L E+L + P R  +   D  A
Sbjct: 61  CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104

[Close]

BLAST of CmaCh03G003200 vs. ExPASy TrEMBL
Match: A0A6J1IKS8 (macrophage migration inhibitory factor homolog OS=Cucurbita maxima OX=3661 GN=LOC111478343 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 112

[Close]

BLAST of CmaCh03G003200 vs. ExPASy TrEMBL
Match: A0A6J1GDU8 (macrophage migration inhibitory factor homolog OS=Cucurbita moschata OX=3662 GN=LOC111453099 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.1e-51
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARF LKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 112

[Close]

BLAST of CmaCh03G003200 vs. ExPASy TrEMBL
Match: A0A6J1CQN7 (macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN=LOC111013868 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.4e-45
Identity = 98/112 (87.50%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGAD+AAIF+ATT+AVSSIIGKPEN+VMVLLKGSVAISFGGN EPAAF
Sbjct: 1   MPCLYISTNVDLAGADTAAIFSATTTAVSSIIGKPENFVMVLLKGSVAISFGGNGEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINS+VKR LI+TI +IL +KLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSQVKRNLISTIAAILNDKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of CmaCh03G003200 vs. ExPASy TrEMBL
Match: A0A1S3CL09 (macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103502168 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.4e-45
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSAAIF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PA F
Sbjct: 1   MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of CmaCh03G003200 vs. ExPASy TrEMBL
Match: A0A0A0L1F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314440 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.8e-45
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSA IF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PAAF
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of CmaCh03G003200 vs. NCBI nr
Match: XP_022978322.1 (macrophage migration inhibitory factor homolog [Cucurbita maxima])

HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 112

[Close]

BLAST of CmaCh03G003200 vs. NCBI nr
Match: XP_022949815.1 (macrophage migration inhibitory factor homolog [Cucurbita moschata] >XP_023543101.1 macrophage migration inhibitory factor homolog [Cucurbita pepo subsp. pepo] >KAG6603558.1 hypothetical protein SDJN03_04167, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033748.1 hypothetical protein SDJN02_03473, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARF LKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 112

[Close]

BLAST of CmaCh03G003200 vs. NCBI nr
Match: XP_038883562.1 (macrophage migration inhibitory factor homolog [Benincasa hispida])

HSP 1 Score: 194.9 bits (494), Expect = 3.7e-46
Identity = 101/112 (90.18%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAGADS AIF+ATT+AVSSIIGKPENYVMVLLKGSV ISFGGN EPAAF
Sbjct: 1   MPCLYISTNVNLAGADSTAIFSATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of CmaCh03G003200 vs. NCBI nr
Match: XP_022144090.1 (macrophage migration inhibitory factor homolog [Momordica charantia])

HSP 1 Score: 190.7 bits (483), Expect = 7.0e-45
Identity = 98/112 (87.50%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGAD+AAIF+ATT+AVSSIIGKPEN+VMVLLKGSVAISFGGN EPAAF
Sbjct: 1   MPCLYISTNVDLAGADTAAIFSATTTAVSSIIGKPENFVMVLLKGSVAISFGGNGEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINS+VKR LI+TI +IL +KLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSQVKRNLISTIAAILNDKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of CmaCh03G003200 vs. NCBI nr
Match: XP_008464238.1 (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 9.2e-45
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSAAIF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PA F
Sbjct: 1   MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of CmaCh03G003200 vs. TAIR 10
Match: AT3G51660.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 4.4e-29
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYI+TNV+  G ++   ++  T AV+SI+G+P+N VMV+LKGSV I FGGNKE AA+
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNLVMVVLKGSVEIVFGGNKEAAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AE+VSMGGI  +VKR LIAT+GSIL    S+ P RF+ KV D  +    SKL
Sbjct: 61  AEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKVFDINSLPLPSKL 112

[Close]

BLAST of CmaCh03G003200 vs. TAIR 10
Match: AT5G01650.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 1.7e-28
Identity = 58/103 (56.31%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCL +STNV+L G D+++I +  +S V+ IIGKPENYVM++LKGSV +SFGG ++PAA+
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDT 104
            E+VS+GG+N++V ++L A + +IL+ KLSVP +RF LK +DT
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDT 103

[Close]

BLAST of CmaCh03G003200 vs. TAIR 10
Match: AT5G01650.2 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 1.7e-28
Identity = 58/103 (56.31%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCL +STNV+L G D+++I +  +S V+ IIGKPENYVM++LKGSV +SFGG ++PAA+
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDT 104
            E+VS+GG+N++V ++L A + +IL+ KLSVP +RF LK +DT
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDT 103

[Close]

BLAST of CmaCh03G003200 vs. TAIR 10
Match: AT5G57170.2 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 4.6e-18
Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP L + TN+ +     + I    T AV+ IIGKPE+YVM+LL   V I+F G +EPAA+
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
            E++S+GG+   V  +L  TI  IL+ KLS+  +RF +K +D+    PVS L
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDS----PVSPL 108

[Close]

BLAST of CmaCh03G003200 vs. TAIR 10
Match: AT5G57170.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17
Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP L + TN+ +     + I    T AV+ IIGKPE+YVM+LL   V I+F G +EPAA+
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDT 104
            E++S+GG+   V  +L  TI  IL+ KLS+  +RF +K +D+
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDS 103

The following BLAST results are available for this feature:

BLAST of CmaCh03G003200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81748	7.1e-08	33.33	Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 P...	[more]
P81529	1.8e-06	35.35	Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 P...	[more]
P91850	8.7e-06	28.57	Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_2...	[more]
P80177	2.1e-04	27.62	Macrophage migration inhibitory factor OS=Bos taurus OX=9913 GN=MIF PE=1 SV=6	[more]
Q1ZZU7	2.1e-04	27.62	Macrophage migration inhibitory factor OS=Ovis aries OX=9940 GN=MIF PE=3 SV=1	[more]

BLAST of CmaCh03G003200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKS8	1.9e-51	100.00	macrophage migration inhibitory factor homolog OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GDU8	7.1e-51	99.11	macrophage migration inhibitory factor homolog OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1CQN7	3.4e-45	87.50	macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3CL09	4.4e-45	87.50	macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0L1F7	5.8e-45	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314440 PE=3 SV=1	[more]

BLAST of CmaCh03G003200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978322.1	3.8e-51	100.00	macrophage migration inhibitory factor homolog [Cucurbita maxima]	[more]
XP_022949815.1	1.5e-50	99.11	macrophage migration inhibitory factor homolog [Cucurbita moschata] >XP_02354310...	[more]
XP_038883562.1	3.7e-46	90.18	macrophage migration inhibitory factor homolog [Benincasa hispida]	[more]
XP_022144090.1	7.0e-45	87.50	macrophage migration inhibitory factor homolog [Momordica charantia]	[more]
XP_008464238.1	9.2e-45	87.50	PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo]	[more]

BLAST of CmaCh03G003200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51660.1	4.4e-29	57.14	Tautomerase/MIF superfamily protein	[more]
AT5G01650.1	1.7e-28	56.31	Tautomerase/MIF superfamily protein	[more]
AT5G01650.2	1.7e-28	56.31	Tautomerase/MIF superfamily protein	[more]
AT5G57170.2	4.6e-18	43.75	Tautomerase/MIF superfamily protein	[more]
AT5G57170.1	1.0e-17	43.69	Tautomerase/MIF superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001398	Macrophage migration inhibitory factor	PFAM	PF01187	MIF	coord: 2..105 e-value: 2.0E-13 score: 50.6
IPR001398	Macrophage migration inhibitory factor	PANTHER	PTHR11954	D-DOPACHROME DECARBOXYLASE	coord: 1..112
IPR014347	Tautomerase/MIF superfamily	GENE3D	3.30.429.10	Macrophage Migration Inhibitory Factor	coord: 1..107 e-value: 2.9E-32 score: 113.5
IPR014347	Tautomerase/MIF superfamily	SUPERFAMILY	55331	Tautomerase/MIF	coord: 1..104
None	No IPR available	PANTHER	PTHR11954:SF25	LS1-LIKE PROTEIN	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G003200.1	CmaCh03G003200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005615	extracellular space
molecular_function	GO:0050178	phenylpyruvate tautomerase activity