
CmaCh03G003070 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAAGATCCCAGGAAGAGAAACCAAACGCCTCTGGTGGCGCGTGGGCGGCGAGTGGAGGAGACACGGCGGGAAGTGAAGAGTGTACGGCGGAGGCGGCGGCGGTGGCTGGGAAATGGGTTCTCGAGAGAGAAAGAAAGCAGCAGCTTCGTCTCTGAATCATCACAAGTCTAAAGAATTTCGTGCCTCCACAAGCTCTAGTGCTGTACTTCCTTATAACCTTTCAAATTTCATGCTTTTCATTTGAAAATTTTCTAAATTTTGTTTATCGATCGAATTCCGAACAAACACCGAAATTTCTCGCGCAGTTTTGATTCAATTCGATTGATTATATATAAAGTCGACCAATTTCCTTTACACATATTCTACTCGGATTTGAACATGTGCAGGTGGTGAATGTGGAGGATTTAGAGAGGGGATTTCTAATAAACGTGTTTTCAGAAAGGAATTCACCGGGATTATTAGTTCGAATTCTAGAGGCCTTTGAAAAACTCGGACTTGAAGTTCTCGATGCAGACGTGTCTTGTTCTGATTGTTTCCAACTTCAAGCTGTTGGAGAAGAGGTCGGTTTAGTCTCTCTACTATAAATTTTTGAAACTAAAATTGTCGTTTATTAAAGTACGAAAATCGATCGGAAGATTTTTGTTGTGTTGGATGATGAAAGTCCCACATCGGTTAATTTAGGGAATGATCATGGGTTTATAATCTAAGAATACACTCTCCATTGGTATGAGGCCTTTTGGGAAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAAAATTATACCATTGTGGAGAGTCGTGTTCGTCTAACATGTTGTATAATATTTTGGATGGTTTTTGGCAGAATGAAGGCACCAAAATCATAAAGGCCCAAGTGGTGAAAAATGCAGTGAAGCAAGCAATCAAGGAATGGAGTGAAAGTAATGGGCAGGCATAAATTATATATATTACCATTTTTTATTTTCCTTTTTTTTTTCCAACATTATATATATAAAAAAAAAAAAAATCAATAAAAATCATTTAAATTACTCGACTCGAATCAATTAATAATTCTAAATGAATCCAGTTGGTCAATTCTTGTTTCCATAGATGACGAATACGTGGCATTTTTAAAAAAAAATTAAAGAATTATATATTTTAATATTGAAAAATAAGATTTTAATTATATATTTATTGGCTGACGAATAAAATGATGAATTAAACTCTTTAATTAATAAATTTGTATTTGTTAATTATAGGTCGCTTTACTTTTATATATGGTAGGATAAGTTGTGTTTATGGATATAACCGTTATAGATAAGTTTATTTTTGACGAGCGGTTCATAATTACAGTTGGATTAAAAACCCATTTTAAATACTACTAATTATGTGATTAACAATTTGTTTATGATTCAATGGGAAATAATAAATTTTGAAACTCTCTGTTTCGTTAAGTACCCAAAATGGTAAATATGTTGATTCAACGAAAATGACTGACAAATCAAATAACGTGTCTTTATAGGCACGGGTTTTATTACTCACTTGAGATTAACATATAACCTTCGTGTAAAATATTTATTTTCTTAAAACTACAAGATTTCATGTGCGTGTTTTTTTATTTGTGCTCTAGAATGGAGTCGCAGTGACTCAAAACAAAATTAGGTCTCGAGCACTGTCAGATTGCTCTAGGATACTACCATACTCGTCTGGTAATACATCCTATACTTTTAATCAATCTATTAGATATAAATTTAATTTTTTTTTTTTTAATGTCTAATAAATCTCCCATTTTTAATTTAATAAGGAAAAATATGAAAAGTAAAAAAGGGCAAAATAGGAATGCAATGAGAAAAAACACAATGGGCCTATAGAACCGGTCCAATAATCTATCTATTTGAGATGGCCCATATATTGATATCTGTACCCAATCCAAATGGGCCTGGTCCAACATCATAAATAGTTAATTGGGCTTTGTTCACACTTTGGGCCGTCTCACCAACTGACTTGTTTGAGTGCTCCCCCGGTTTTCTGATACAGGCGGAGGAAATCCAAGCATTTCCGTTGGCTGCCGGCGAACAAGAAACAGCGGTGGTTTTTTTCTTCTTCGTCAACAAAGAATCGAGGGAGAGGATCTGTCTCAGTTTTTTTTTATAA TTTTAAGATCCCAGGAAGAGAAACCAAACGCCTCTGGTGGCGCGTGGGCGGCGAGTGGAGGAGACACGGCGGGAAGTGAAGAGTGTACGGCGGAGGCGGCGGCGGTGGCTGGGAAATGGGTTCTCGAGAGAGAAAGAAAGCAGCAGCTTCGTCTCTGAATCATCACAAGTCTAAAGAATTTCGTGCCTCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGGATTTAGAGAGGGGATTTCTAATAAACGTGTTTTCAGAAAGGAATTCACCGGGATTATTAGTTCGAATTCTAGAGGCCTTTGAAAAACTCGGACTTGAAGTTCTCGATGCAGACGTGTCTTGTTCTGATTGTTTCCAACTTCAAGCTGTTGGAGAAGAGGCGGAGGAAATCCAAGCATTTCCGTTGGCTGCCGGCGAACAAGAAACAGCGGTGGTTTTTTTCTTCTTCGTCAACAAAGAATCGAGGGAGAGGATCTGTCTCAGTTTTTTTTTATAA ATGGGTTCTCGAGAGAGAAAGAAAGCAGCAGCTTCGTCTCTGAATCATCACAAGTCTAAAGAATTTCGTGCCTCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGGATTTAGAGAGGGGATTTCTAATAAACGTGTTTTCAGAAAGGAATTCACCGGGATTATTAGTTCGAATTCTAGAGGCCTTTGAAAAACTCGGACTTGAAGTTCTCGATGCAGACGTGTCTTGTTCTGATTGTTTCCAACTTCAAGCTGTTGGAGAAGAGGCGGAGGAAATCCAAGCATTTCCGTTGGCTGCCGGCGAACAAGAAACAGCGGTGGTTTTTTTCTTCTTCGTCAACAAAGAATCGAGGGAGAGGATCTGTCTCAGTTTTTTTTTATAA MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVEDLERGFLINVFSERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEAEEIQAFPLAAGEQETAVVFFFFVNKESRERICLSFFL Homology
BLAST of CmaCh03G003070 vs. ExPASy TrEMBL
Match: A0A6J1IM47 (uncharacterized protein LOC111477723 OS=Cucurbita maxima OX=3661 GN=LOC111477723 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of CmaCh03G003070 vs. ExPASy TrEMBL
Match: A0A6J1GFJ5 (uncharacterized protein LOC111453491 OS=Cucurbita moschata OX=3662 GN=LOC111453491 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.9e-37 Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of CmaCh03G003070 vs. ExPASy TrEMBL
Match: A0A1S3CLI8 (uncharacterized protein LOC103502184 OS=Cucumis melo OX=3656 GN=LOC103502184 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of CmaCh03G003070 vs. ExPASy TrEMBL
Match: A0A0A0L039 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329560 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 4.1e-31 Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of CmaCh03G003070 vs. ExPASy TrEMBL
Match: A0A6J1HSD7 (uncharacterized protein LOC111466169 OS=Cucurbita maxima OX=3661 GN=LOC111466169 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30 Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of CmaCh03G003070 vs. NCBI nr
Match: XP_022977370.1 (uncharacterized protein LOC111477723 [Cucurbita maxima]) HSP 1 Score: 167.9 bits (424), Expect = 5.5e-38 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of CmaCh03G003070 vs. NCBI nr
Match: XP_022950375.1 (uncharacterized protein LOC111453491 [Cucurbita moschata]) HSP 1 Score: 164.5 bits (415), Expect = 6.1e-37 Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of CmaCh03G003070 vs. NCBI nr
Match: XP_038882922.1 (uncharacterized protein LOC120074022 [Benincasa hispida]) HSP 1 Score: 151.4 bits (381), Expect = 5.3e-33 Identity = 83/90 (92.22%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of CmaCh03G003070 vs. NCBI nr
Match: XP_008464258.1 (PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo]) HSP 1 Score: 146.0 bits (367), Expect = 2.2e-31 Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of CmaCh03G003070 vs. NCBI nr
Match: XP_004149926.1 (uncharacterized protein LOC101209807 [Cucumis sativus] >KGN54434.1 hypothetical protein Csa_012709 [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 8.5e-31 Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of CmaCh03G003070 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 3.5e-14 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of CmaCh03G003070 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators ) HSP 1 Score: 70.1 bits (170), Expect = 1.5e-12 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of CmaCh03G003070 vs. TAIR 10
Match: AT1G29270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 3.2e-04 Identity = 23/54 (42.59%), Postives = 31/54 (57.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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