CmaCh03G002660 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G002660
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionLEA_2 domain-containing protein
LocationCma_Chr03: 3677324 .. 3677980 (+)
RNA-Seq ExpressionCmaCh03G002660
SyntenyCmaCh03G002660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGCCTCCTCCTCCACATCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGCCACCGCAAGCTCCCGGAGTCGCCGCAACCTTTGCATCGGAGTCTCCGTCGTCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGCCCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGTTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGATTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATAGATGCAGGTCAGACCACGCAGATGAACATTAGGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAAAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGAAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTGA

mRNA sequence

ATGGAAGTTGCCTCCTCCTCCACATCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGCCACCGCAAGCTCCCGGAGTCGCCGCAACCTTTGCATCGGAGTCTCCGTCGTCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGCCCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGTTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGATTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATAGATGCAGGTCAGACCACGCAGATGAACATTAGGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAAAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGAAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTGA

Coding sequence (CDS)

ATGGAAGTTGCCTCCTCCTCCACATCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGCCACCGCAAGCTCCCGGAGTCGCCGCAACCTTTGCATCGGAGTCTCCGTCGTCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGCCCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGTTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGATTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATAGATGCAGGTCAGACCACGCAGATGAACATTAGGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAAAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGAAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTGA

Protein sequence

MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Homology
BLAST of CmaCh03G002660 vs. ExPASy TrEMBL
Match: A0A6J1IR72 (uncharacterized protein LOC111477726 OS=Cucurbita maxima OX=3661 GN=LOC111477726 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmaCh03G002660 vs. ExPASy TrEMBL
Match: A0A6J1GFM4 (uncharacterized protein LOC111453494 OS=Cucurbita moschata OX=3662 GN=LOC111453494 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101
Identity = 208/218 (95.41%), Postives = 211/218 (96.79%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           MEVASSSTST IKDSKSTKSVVD TA SRSRRNLCIGVSV VAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITL+ADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELV EVPILAA+IDAGQTTQMNI LRILADRFVKTSTVFFDVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmaCh03G002660 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.6e-73
Identity = 150/218 (68.81%), Postives = 183/218 (83.94%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           ME+ASSS S+LIKD KST+S   A   SR RRN CIG+S  +A++LL+++II+ILAFTVF
Sbjct: 1   MEIASSS-SSLIKDPKSTQSTAAAATRSRKRRNTCIGIS--IAILLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TLIAD+AITNPNKVGFSY NSTAF NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELVGE PI+A +IDAG+  +MNI L I+ADR +KT+TVF D VAGSMPLN Y ++SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIH+VS+TSCDF+++ISER I DQQCNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of CmaCh03G002660 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.4e-73
Identity = 151/219 (68.95%), Postives = 187/219 (85.39%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATAS-SRSRRNLCIGVSVVVAVVLLVVVIIVILAFTV 60
           ME+ASSS+S+ IKD KST+S   A A+ SR RRN CIG+S  +A++LL++++I+ILAFTV
Sbjct: 1   MEIASSSSSS-IKDPKSTQSAAAAAAARSRKRRNTCIGIS--IAILLLLIILIIILAFTV 60

Query: 61  FKPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNY 120
           FK KRPITT+NSV++ D D+SL++ R SVD N+TLIA +AITNPNKVGFSY NSTAF NY
Sbjct: 61  FKAKRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNY 120

Query: 121 RGELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGK 180
           RGELVGE PI+A +IDAG+  +MNI L I+ADR +KT+TVF DVVAGSMPLN YA++SGK
Sbjct: 121 RGELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGK 180

Query: 181 VMILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           V ILGIFNIH+VSTTSCDF+++ISER + DQQCNYHTKI
Sbjct: 181 VKILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of CmaCh03G002660 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 7.0e-63
Identity = 139/218 (63.76%), Postives = 173/218 (79.36%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           ME+ASS+T    KD KS +        SR RRN CIGVS  +A VLL++V+IVILAFTVF
Sbjct: 1   MEIASSTT----KDPKSIR--------SRRRRNTCIGVS--IATVLLLIVLIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITTINSV++ D D+SL++ R++V  NITLI DV+ITNPNKVGFSYSNSTA  NYR
Sbjct: 61  KAKRPITTINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GEL+GE PI + +I+A Q+ +MNI + I+ADR +++STV  DVVAGSMPLN Y ++SGKV
Sbjct: 121 GELIGEAPIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIF I +VS+TSCDF+I+IS+R I DQQC+YHTKI
Sbjct: 181 RILGIFKIRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of CmaCh03G002660 vs. NCBI nr
Match: XP_022977374.1 (uncharacterized protein LOC111477726 [Cucurbita maxima])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmaCh03G002660 vs. NCBI nr
Match: XP_022950379.1 (uncharacterized protein LOC111453494 [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101
Identity = 208/218 (95.41%), Postives = 211/218 (96.79%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           MEVASSSTST IKDSKSTKSVVD TA SRSRRNLCIGVSV VAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITL+ADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELV EVPILAA+IDAGQTTQMNI LRILADRFVKTSTVFFDVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmaCh03G002660 vs. NCBI nr
Match: KAG6603510.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033691.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374.4 bits (960), Expect = 6.7e-100
Identity = 204/218 (93.58%), Postives = 210/218 (96.33%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTLIKDSKSTKSVVD TA SRSRR LCIGVSV VAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSV RTSVDFNITL+ADVAITNPNKVGFSYSNST FFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELV EVPILAA+IDAGQTTQMNI LRILADRFVKTSTVF+DVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           MILGIFNIHMVSTTSCDFSIN+SERNIKDQ+CNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218

BLAST of CmaCh03G002660 vs. NCBI nr
Match: XP_023544036.1 (uncharacterized protein LOC111803737 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.0 bits (959), Expect = 8.7e-100
Identity = 205/218 (94.04%), Postives = 209/218 (95.87%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTLIKD KSTKSVVD TA SRS  NLCIGVSV VAVVL +VVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFD+SLSVVRTSVDFNITL+ADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELVGEVPILAAQIDAGQTTQMNI LRILADRFVKTSTVFFDVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmaCh03G002660 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 5.3e-73
Identity = 150/218 (68.81%), Postives = 183/218 (83.94%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           ME+ASSS S+LIKD KST+S   A   SR RRN CIG+S  +A++LL+++II+ILAFTVF
Sbjct: 1   MEIASSS-SSLIKDPKSTQSTAAAATRSRKRRNTCIGIS--IAILLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TLIAD+AITNPNKVGFSY NSTAF NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELVGE PI+A +IDAG+  +MNI L I+ADR +KT+TVF D VAGSMPLN Y ++SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIH+VS+TSCDF+++ISER I DQQCNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of CmaCh03G002660 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 92/205 (44.88%), Postives = 141/205 (68.78%), Query Frame = 0

Query: 15  SKSTKSVVDATASS-RSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVS 74
           S  T+S    TA   R +RN  I +   + ++LL+ ++IVILAFT+FKPKRP TTI+SV+
Sbjct: 31  SMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVT 90

Query: 75  IDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQ 134
           +D    S++ +   V  N+TL  D+++ NPN++GFSY +S+A  NYRG+++GE P+ A +
Sbjct: 91  VDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANR 150

Query: 135 IDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVST 194
           I A +T  +NI L ++ADR +  + +  DV+AG +PLN + KV+GKV +L IF I + S+
Sbjct: 151 IAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSS 210

Query: 195 TSCDFSINISERNIKDQQCNYHTKI 219
           +SCD SI++S+RN+  Q C Y TK+
Sbjct: 211 SSCDLSISVSDRNVTSQHCKYSTKL 235

BLAST of CmaCh03G002660 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 68/209 (32.54%), Postives = 114/209 (54.55%), Query Frame = 0

Query: 9   STLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITT 68
           +T++  S  + S +  T  SR+R    I    V A  L++  I++ L FTVF+ K PI  
Sbjct: 13  ATILPVSDESASNIKNTHRSRNRIKCSI---CVTATSLILTTIVLTLVFTVFRVKDPIIK 72

Query: 69  INSVSIDDFDMSLSVVRTS----VDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELV 128
           +N V ++  D   SV  T+    +  NI++I DV++ NPN   F YSN+T    Y+G LV
Sbjct: 73  MNGVMVNGLD---SVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLV 132

Query: 129 GEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVV-AGSMPLNAYAKVSGKVMIL 188
           GE   L  +    +T++MN+ + I+ DR +    +  ++  +G + + +Y +V GKV I+
Sbjct: 133 GEAHGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIM 192

Query: 189 GIFNIHMVSTTSCDFSINISERNIKDQQC 213
           GI   H+    +C  ++NI+ + I+D  C
Sbjct: 193 GIVKKHVTVKMNCTMAVNITGQAIQDVDC 215

BLAST of CmaCh03G002660 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 57/190 (30.00%), Postives = 98/190 (51.58%), Query Frame = 0

Query: 30  SRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTSVD 89
           S+R +C  VS ++ V+ ++ +  +ILA  VFKPK PI    S ++D    ++S +   V 
Sbjct: 2   SKRRICCIVSGIIFVLFVIFMTALILA-QVFKPKHPILQTVSSTVDGISTNIS-LPYEVQ 61

Query: 90  FNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNIRLRIL 149
            N TL  ++ + NPN   F Y        YR  LVG + + ++ + A  +  +   L + 
Sbjct: 62  LNFTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQ 121

Query: 150 ADRFV-KTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSINISERNIK 209
            D+FV     +  DV+ G + +   AK+ GK+ +LGIF I + S + C+  +      ++
Sbjct: 122 LDKFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVE 181

Query: 210 DQQCNYHTKI 219
           DQ C+  TK+
Sbjct: 182 DQVCDLKTKL 189

BLAST of CmaCh03G002660 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 52.4 bits (124), Expect = 5.4e-07
Identity = 38/115 (33.04%), Postives = 64/115 (55.65%), Query Frame = 0

Query: 28  SRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTS 87
           S  R NL    +V    +L+++V+++++ FTVFKPK P  ++N+V +  F +S +     
Sbjct: 10  SSGRTNLA-SCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVSNNTA--- 69

Query: 88  VDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQM 143
              N +    VA+ NPN+  FS+ +S+    Y G  VG + I A +ID+G+   M
Sbjct: 70  ---NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYM 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1IR721.0e-106100.00uncharacterized protein LOC111477726 OS=Cucurbita maxima OX=3661 GN=LOC111477726... [more]
A0A6J1GFM41.7e-10195.41uncharacterized protein LOC111453494 OS=Cucurbita moschata OX=3662 GN=LOC1114534... [more]
A0A0A0L0942.6e-7368.81LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ... [more]
A0A1S3CJB54.4e-7368.95uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=... [more]
A0A6J1HS807.0e-6363.76uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106... [more]
Match NameE-valueIdentityDescription
XP_022977374.12.1e-106100.00uncharacterized protein LOC111477726 [Cucurbita maxima][more]
XP_022950379.13.5e-10195.41uncharacterized protein LOC111453494 [Cucurbita moschata][more]
KAG6603510.16.7e-10093.58Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_023544036.18.7e-10094.04uncharacterized protein LOC111803737 [Cucurbita pepo subsp. pepo][more]
XP_004142665.15.3e-7368.81uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
AT3G54200.11.2e-4344.88Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.11.1e-1832.54Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.11.4e-1530.00Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.15.4e-0733.04Glycine-rich protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1820coord: 51..200
e-value: 9.8E-9
score: 37.2
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 27..217
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 27..217
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 46..189
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 98..184
e-value: 3.8E-8
score: 33.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G002660.1CmaCh03G002660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane