CmaCh03G002510 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGCCCGGAGAAACCACAAAGATCGGAAAAAATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCTGGATACCGTCCTCCGTACTGCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCACCTCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCTTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCTGACTACGGCTACTCTTCTGGACCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACCGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGACAAAGTTATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAAGTATGATCGATTTAACCCTTGATCATTTCCAGTTTTCGCCTTAATTTGTAATTAGATCATTCGATTTTTGAAATTCTTCTTTACTCTTTGATTTTAATGGCGTTGATCAATCGTGAATGTTTCAGCACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCATTCCATCGGAGATACTCATCCGGTAAGTTTTGCCTCTCATTCTATTGCCGCTGTTCGTCGTAATTTTTCTGGAAATTGAAATTCTCTGTGATGTTACTGAAAGATGGATGAATTTACAGAACCCAGAAAATCATATATCCTATGGTGTAAACTTACCGTGCTTTTTGAAATATTCTATGTATTAATTGATTAATTATTCCACTAGAAGTCAAGATCTTATATTTTAAGTTCTAAGAGATTTTGTCCTTAAATAAGAATTATTATTATATTTATCTCATAATGAAGTGAAACGTGTTCTTGATCAAAATAAAATAAATCTGGGTTGAAATTAATTAAAAAAGTGGATCATATATACCTGAGAGGATAAAAGGAAGTACTGTTATCTTTTCTAAAGTTGAATGTGAGATATGTTCAAAGTAATGATTATAATCAAAATTTCTCTAATTCATTAGCTTAAACTTTTTGGATGACCGGTGATTTAACTTAGTATCAAAAGCAAGTGGTCTTGTGTTTGAACCTTTGTAATATCATTTCCTTCCCAATAAATATTGGTTTCCACTTGTTGGGTTTTCTATAAGTATTCAGATGGGAATTGAGCATGGTGGTATTTTTTGTATCTGTCCTAGAAGAGTTTTTTTTTTTTTTTGTTTTTTTTCCTGAAGTTTTTGAGTCAAAACTACAATAAATGTGGCTATAAGTATTTGAATCATCTGACTTTATGAGAATAAGTACATGGCAATTACTACTTAGCTTATGCTTGTGTTGGTTCCAATTTTATCAACCCAAAGTCTACCCCTAGCAAATATCAAGGGTTTTAAAAACTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCGGCTAGCAGTGGGTTTTGGGTCGTTACAAATGGTATCAAAGCCAGTCACCGAAGGATGCGAGGCACTGGTCGGAGTAGGGGCTAGATTCTCTTCGTAGTAGACACATTTTAAAATCCTTGAGGGGAAGCCTAAAAGGGAAAGTCCAAAGAGGAATATTTGCTAGCGGTGGGCTTTGGGTCATTACAAATGGTATCAAAGCCCGTCACCGGAGGATGCGAGACACTAGTCGGAGTAGCGGGCTAGATTCTCTTTGTAGTAGATGCGGTTTAAAATCCTAGCCTGAAAGGGAGAGTCCAAAGAGGGCAATTTCTGCTCGAGTTGGTTGAGAGTACATTACTTTTGTAGGTGTATTGAGTCTTTGTTTTGGTTAGTTTGGCTGTAATTGCTATTTTTAATTTCTGCTTTTGTGGTGGTTGAGGGTTAAGATGTTTATGTTGCCTGGGTTCGGCATTTTTTGTGATCAAGTTTCATTGGTTGCATCTTGGGGATTTAAGATTTCTCGGTAAAGCTTTTGAATTTAGTTTCACGAAAGGTAACAAAATGGAATACCAAAATCCTAACACCCAACCAAACTGAGTGAAGCAAAGCAACTAAACTCGGTTGGATAGTGAGGATGACATTAGTTCTGATTGGAATGACGTTAGAAAGTCACTTCAAAACGGCCCCTACAATCGAAATGGACTAACGAAACGAACTGACATGGTAAATTCAATGCAGGTACAGCTGATACAATACAATCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCAAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGGGTTGAATGTTGATGCTTTTCATGGGGACAAATATTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTGTAAGTTCTTTTTCTTGCCCCTACTGCCCTTTTTTGCCAAATAAAACTGTGCTTGCATTGATTTGAAATCATTCTCTCGTTTTTCTTGCTGTTGAATTTCTGGATCTGAAGCCTAATCAAGAATTAGATTGCTCGTTCTACTTAGTTTAAATTACAAATAGAGTTGGTAAGTTCATAAATTCTTTTAGTCAGAATGATCTACTAGTGTCCCAAAATAAAAAATTCAAGGACCCGTTCAAAGACTAAACTTGTACTGAAATTCTTTTTTATTTCTTATCTAGGACGGATTTTGTATATTTATCTTATGATATAGAAGAAAAATATGAGATCATTCATGTTGGTAACCTTACATTAGAAAGATGGGAAAACTTACATGTTATTCTTCACATTGTTAATTGATTTTGAGATAAAACTCCAGATAGCATCTTAGTCCATGATGCCCAAACTAATATTTGGCCTCCAAAAAAATCGAGTCCGACTCGAGAATATGATGAAGCGAAAAAAAAAACACCATCTTGAGAGGCATGTCGAAGATCCCACATTGGAAAGATGGGAAGATCTTACAATTTTTATGAACTACATGAACAATATATCATACGTGTTTAAAGGAGGTTTAAACTAGCTTAGCTTAGTGAGTTGACTTCATTCTTGAGCTTTGATTTTATGAATTGAAGCTAGTAGTCTTTGATTAGTCCAGGGTTTTTAATAAGTAAATTTAGAAGATTTTTGTGACCAGCTATGAATTCTTTTGTAGCATTTTAAAAGTGAATTGGGTGTTTTGTGGCTAGGTTCCATTTGCATCTATGATTGATACAAAATTGAATTTTTGACTTTAGATATGGTAATCAGTGAGTTAGTCACCGAACTATGCTTGGATTGACGTTAAGAACAACCCGAACTTGATTGATATTTCGTTTAGATATTGAAAATTTGAAACTTTGACCGATTACTTTTATCTTTTTGGGGTACAAACAGGAGGGATGTGACAGATAAAAGGAGGGAGGGTATGCTATGCAGTGGAATGGGTAATGTGACCTTGAAAATAAAGGTATTCTCTTGGGTGTTGAGAAGCCATATTTTATGAATTTCAAGTGTGGAATATGAATATAATTTGGGCTTTGGCTTTAGCAATTAGTATGGATTTGGATGCCAGTTTGGTTTTGGCCATGTTCTTGTAAAACCCCACGTATCTTCTTCTTATGTTTCATTTGATGGAAATGATATCAATCTACGTCCATGTCCTATTTTTTCATCTTCTTATTCTGAATATAATGTTTTTAGCTAGTTGA AGCCCGGAGAAACCACAAAGATCGGAAAAAATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCTGGATACCGTCCTCCGTACTGCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCACCTCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCTTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCTGACTACGGCTACTCTTCTGGACCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACCGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGACAAAGTTATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAACACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCATTCCATCGGAGATACTCATCCGGTACAGCTGATACAATACAATCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCAAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGGGTTGAATGTTGATGCTTTTCATGGGGACAAATATTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTCTAGTTGA ATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCTGGATACCGTCCTCCGTACTGCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCACCTCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCTTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCTGACTACGGCTACTCTTCTGGACCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACCGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGACAAAGTTATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAACACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCATTCCATCGGAGATACTCATCCGGTACAGCTGATACAATACAATCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCAAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGGGTTGAATGTTGATGCTTTTCATGGGGACAAATATTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTCTAGTTGA MSFPFHHHHRRDDEEDDERRYPPPGYRPPYCDPPPPVVPSVYHTHYDGAPPPPMVSSVHHTHYDEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGPPPAVVHHHSHHSHFPSVIHHHSHNSNSSFSNKPTVKVFTKANPNFSLAIRDDKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFALVNKATGQAMKHSIGDTHPVQLIQYNPDVVDESVLWTQSKDFGEGFRSIRMVNNIGLNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPYSS Homology
BLAST of CmaCh03G002510 vs. ExPASy Swiss-Prot
Match: Q945P1 (Ricin B-like lectin EULS3 OS=Arabidopsis thaliana OX=3702 GN=EULS3 PE=1 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.9e-66 Identity = 154/317 (48.58%), Postives = 191/317 (60.25%), Query Frame = 0
BLAST of CmaCh03G002510 vs. ExPASy Swiss-Prot
Match: Q6Z4N4 (Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G3 PE=2 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 3.8e-58 Identity = 108/189 (57.14%), Postives = 137/189 (72.49%), Query Frame = 0
BLAST of CmaCh03G002510 vs. ExPASy Swiss-Prot
Match: Q10M12 (Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica OX=39947 GN=R40C1 PE=1 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.8e-53 Identity = 96/177 (54.24%), Postives = 127/177 (71.75%), Query Frame = 0
BLAST of CmaCh03G002510 vs. ExPASy Swiss-Prot
Match: Q6Z4N6 (Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G2 PE=2 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.8e-53 Identity = 93/165 (56.36%), Postives = 122/165 (73.94%), Query Frame = 0
BLAST of CmaCh03G002510 vs. ExPASy TrEMBL
Match: A0A6J1ITL7 (ricin B-like lectin R40G3 OS=Cucurbita maxima OX=3661 GN=LOC111478294 PE=4 SV=1) HSP 1 Score: 585.9 bits (1509), Expect = 9.1e-164 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmaCh03G002510 vs. ExPASy TrEMBL
Match: A0A6J1GEM1 (ricin B-like lectin R40G3 OS=Cucurbita moschata OX=3662 GN=LOC111453449 PE=4 SV=1) HSP 1 Score: 572.0 bits (1473), Expect = 1.4e-159 Identity = 273/279 (97.85%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of CmaCh03G002510 vs. ExPASy TrEMBL
Match: A0A1S3B4K8 (extensin OS=Cucumis melo OX=3656 GN=LOC103485969 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 1.2e-120 Identity = 215/282 (76.24%), Postives = 238/282 (84.40%), Query Frame = 0
BLAST of CmaCh03G002510 vs. ExPASy TrEMBL
Match: A0A0A0KYQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193240 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.3e-119 Identity = 211/279 (75.63%), Postives = 235/279 (84.23%), Query Frame = 0
BLAST of CmaCh03G002510 vs. ExPASy TrEMBL
Match: A0A6J1DST7 (ricin B-like lectin R40G3 OS=Momordica charantia OX=3673 GN=LOC111023166 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 4.4e-110 Identity = 197/279 (70.61%), Postives = 230/279 (82.44%), Query Frame = 0
BLAST of CmaCh03G002510 vs. NCBI nr
Match: XP_022978259.1 (ricin B-like lectin R40G3 [Cucurbita maxima]) HSP 1 Score: 585.9 bits (1509), Expect = 1.9e-163 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmaCh03G002510 vs. NCBI nr
Match: XP_022950338.1 (ricin B-like lectin R40G3 [Cucurbita moschata]) HSP 1 Score: 572.0 bits (1473), Expect = 2.8e-159 Identity = 273/279 (97.85%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of CmaCh03G002510 vs. NCBI nr
Match: KAG6603498.1 (Ricin B-like lectin EULS3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 569.7 bits (1467), Expect = 1.4e-158 Identity = 271/279 (97.13%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of CmaCh03G002510 vs. NCBI nr
Match: KAG7033678.1 (Ricin B-like lectin EULS3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 569.3 bits (1466), Expect = 1.8e-158 Identity = 270/279 (96.77%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of CmaCh03G002510 vs. NCBI nr
Match: XP_023544941.1 (ricin B-like lectin R40G3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 565.5 bits (1456), Expect = 2.6e-157 Identity = 271/279 (97.13%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of CmaCh03G002510 vs. TAIR 10
Match: AT2G39050.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 253.4 bits (646), Expect = 2.1e-67 Identity = 154/317 (48.58%), Postives = 191/317 (60.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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