CmaCh03G001360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G001360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Adenylate kinase
Location	Cma_Chr03: 1639443 .. 1644125 (+)
RNA-Seq Expression	CmaCh03G001360
Synteny	CmaCh03G001360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAGAGATCATCAGACCAAACAGACTAATTTCTAAATTTAGGCAGCACTCTCCGCTGCCGCAGTCTCCGGCTTCCGATGAAATCGCCGCCCCCCTTTCCCCTCTCCGAGCAATCACAGTGGTTCCAGCCCCTAACCCGCGTCGTTGACGAGATTGCGCCGCCGCCGCTCATTTTTCAGATTCTCGAGGTTTTATTTTTTGTTTTGTTGGGTTATGTTGGTTTATTTTCTTCCACGGAGAAAATTGTGAACAATTTTTTTCTTGTTTTTTTGTTGATTTCTTCTTCATTCAATGTTCAACTAGTCTAAATGAAAACATAAAACTAAGAATGTATACATCACAAATTAGTACCAAGAAAAAAAAAACAAAAAACAGATTGAATCGATCAATAAAAAGGAACAGTAATACATGGATTCAATAATAAAGAGGAAATTTCGTTTAAGAAAATTTGTTAGGAACCATGACACTCCATGAAATTGTTCACTTTGAGGATGAATTTCTTACTTATAAATGTAGGATCATTCTCTTACTTAGTCAACGTGGGACTTCTTTCCCAATAATCCTCCCCTCGAACAAAATACACCATAGAGCCACCCCTTAGGCCTATGAAGCCTTCGAACAACCTTTCCTTAATCGAGACTTAACTCCTTCTCTGGAGCTTCGAACAAAGTACACCCTTTGTTCAACACTTGAGTCACTTTTGACTACACCTTCGAGACTCAACTTTTTTGTTCAATATTTGAGGATTCTATTGACATAGCTAAGTTAAGGATATGGGTTTGATACCATGTTAGGAACCATGGCCCTCCACAATTGTATGATATTGTCCATTTTGAGCATAGTCTCTCATGGTTTTGCCTTTGGTTTTCCCCAAAGGCCTCATACCAATGGAGATGTATTCCATACTTATAAACCCATGATCATCCCCTTAATTAGCCAATGTCAGACTCCTTCTCGACAATCCTCAACATGCTACCCTTTCGACTATATATGTAGATGAATTGCTGCAGGGAGTCATTTAATTTTCATATGAACTGCTGTAGAGTTGTTAAATGTTCGATTAAATTCCTCTTAGAATGTTGCATTGTATCATTATTTTGTGAAATGGTGTTGGCATTAACAAGAGTGATGAAATGCAATTTAGAATGTCAATTTGCATTGCATCATTATTTTACTGTTTATTGTTTGAAATTATTCATGGCCTGTTCTTTGTCTTCTCTTTTCATAATTCCTGGATTCATGTATAAGAATCAGATTCAGCACTTGTTAGAGTTTTGATTGAAAGCTATGCCGCACCGAACACGACCTATGACTGCGCTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCTAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGGTATTTTCCATTATCACTTGCAAGTTATTTGATTGTTTTTTTGCTCATGTATACAAGCTTGTTATACTTATGATAAATATGCATTGTTCTGTGTTTGGTGGCTATTTTCATTGCCATAGTTACTCTGTTTATCTTTAAAAGTTGTACTGGAGAGGGATTGTTTAGTTTCTAGTTGAGAGATCTGGTGGAGGCTATCACTTGTTAGAGAATGTTATAGTTGTGGGATCGGATTTTCAATCGGAATATGTACGGTTGAGCACTCGGAGAGGGGGGGGGGTTGGATATTTTGAGGAAACTTGAAGAACAATTATGTCCCATAATCCCACATTGGTTGGGGAGGAGAACGAAACACCCTTTGTAAAGGTGTGGAAACCTTCCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGTCCGACACTGGGCCATGTGCCAGTGATATGGTTGTTCCCCGAAACAGGGTAGACACGAGGCGGTGTGCCAGTAAGGATGCTAGGCCTCGAAGAGGGGTGGATTGTGAGATCCCACAATCCCACATTAGTTAGGGAGGAGAACGGAACACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAAATCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATGTGCTAGCGGTGAGCCTGGACCGTTACACATATTGCGAGATCCTACATCAGTTGGGGAGAAGAACGATTGTGAGATCTCATATCGGTTGCGAGGGAAAACGAAGCATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAACAGACGTGTTTTAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGAGGACATCTGCTAGCGGTGAGCTTGAGCCGTTACACATATGAAAGGTTGATGTTCTTTAAAGCTCGACTATGTATTCTATTTTTTGCTCTATCCACTAGATAATCAATTACTATCAGAGCAACAATTACTTGATGGGGCCATTGTGTTGCATGTTTTGTAAAAGAACAACGAAGGATCTTGATCATACTCTTTTAGTTTAGTGGGTAGGTCATGTATTACCTTTCCAGAGGTTGAAGATTTGGTCTCCTACTTCATTTGTTGAACTCAAAAACAAAAAATAAGATTTATCAAGGAACATTAAGGGTATTAAATTAAAGATGTAGGATGCTTGAATTAAAGAGACAGATTAAGATTATAGGCTTTAATGGACAGACTACTGTTAATACCCAATAGTAGGAGTTGGACCAACAAAATCTTTTTAAGAGGAATAAGAGGAAGATGGAGGGCGAACGTGAATCAGTATCGAAGAAAGGAACATTTTTCTTTATGGTTAATATCGAACCATAGGAAGGAGGGATAACATTGAAGTTATTAATTATAACAGCCCACACCCATCGCTAGCAGATATTGTTCTCTTTGGGATTTCCCTTCTGGGCTTAGGTTTTAAAATGCATCTACTAGGGAGAGGTTTTCACACACTTATAAGGAAGGCTTCGTTCCCTTCTCCAACCATTGTGGGATCTCACAATCCACCCCCTTTTGGGGCCCAGTGTCCTCGTTGGCACACCGCCCGGTGTCTGGCTCTGTCCTCTTTGGACTTTCCCTTATGGGCTTCTCTCAAGGTTTTAAAATGCATCTGCTAGGGAGAGGTTTCCACACCCTATAAAGAATGTTTCATTCCCATCTCCAACTAATTCGAGATCTCACATTAATTTACAAATTTTTTATTTGAAAACGAATTTTGTTTAAAAAACATTGTCATTTGTGAGAATGATAGACCCCTGGTCCTTAAGATGCATACGCGTGCAAGAAGAAAGGGAAGGGGCCTACTGCAGAGTGGTGAATGTTGTGTTATTGTGTCTTGGAATTCCATAGTTAGTTGTTTGGCATCGTTATGGTTAAGGGAGGGAGTATATGAGTTGGGCTGCTGACCGCATTATGTATATTTTGACACTTTTGGCTGATTGAGTATTGAGAGATTTTGTAACAGCTCAAATAGCTAACAAATATTATCCTTTTTGGAAAGTGATATTGTCCTCTTTGGGCTTTCCCTTCCATGCTTCCCCCCAAAGTTTTAAAATGCATCTACTAGGGAGAGGTTTTCACACCTTTAAAAGGAATGTTTCATTCCCCTCTCCAATTGATGTGGGATCTCACAATCCACCCGCTTGAGTGTCCAGCATTCTCGCTGCCACTCCACCTGGTGCCTGGCTTTGATACCATTTGTAACAGCCCAAACCCACCGCTACCAGATATTGTCCTCTTTGGGCTTTCCCTTCTGGGCTTTCTCTCAAGGTTTTAAAACACGTCCATAGGGATAGATTTTCACACCCTTATAAGGAATGTTTCTTTTCCCTCTCCAATCGATGTGAGATCTCACAATCCATCTCCTTGGGGGTCTAGTGTTCTTGCTGGCACACCGCTCGATGTCTAGCTCAGATACCATTTGTAACAACTCAAGCCCACCGCTAAAAGATATTGTCCTGTTTGGACTTTCCCTTCCGGGCTTCCCCTTAAGGTTTTAAAACGCGTCAACTAAGGAGAGATTTCCACACTCTTATAAGGAATACTTCATTCCCCTCTCCAACCGATATGGGATCTCACAGATCTTCTTCTGCTTGTTCTTATTTTTCGTGAAAATGAACTAGGACTCGTCAAGAACATACTAAAAGGAAAACAAGAAAGAGTGGCAATGCAATCATGCTTTTATATAACTTATTGCTATAAAACAACGTAAAACTGTCCTGAAAACAGTTTTCTTCCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAGTAAGCTGGCTTTGCTGCTCTTTTGTATTACACTTACCTAGCCATCTGCTTAGACAGCAAGTTCATGAGTTTTTTGCTTGACATCCACAAACATGTTTATGACAAGAACATTTATTATTATCAGATCAAAACTTCAAAAAAAGACATCTCTGTTATTTTGTGATAGATGTTCTTATATTCTGGCTGCAGAGAGAACTGTGTCATCAGCAACACGAAGCTGCGATCGGGAAGAGCGTTTAGAATACAGACGAGCATCTAAATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGGTGAGATTTTCTCTTATCCTTTCAATCATTCAAGAAATGAAGATAAGAATGGGATAAGAAAGCCCTTTGGTTGCCAACTGCAGGATTTATTGTCCACTGATTGCAGAATTGGACCATTAGATTCACAAGCTGTCATGGTTGATATGTCATAA

mRNA sequence

GGAGAGAGATCATCAGACCAAACAGACTAATTTCTAAATTTAGGCAGCACTCTCCGCTGCCGCAGTCTCCGGCTTCCGATGAAATCGCCGCCCCCCTTTCCCCTCTCCGAGCAATCACAGTGGTTCCAGCCCCTAACCCGCGTCGTTGACGAGATTGCGCCGCCGCCGCTCATTTTTCAGATTCTCGAGATTCAGCACTTGTTAGAGTTTTGATTGAAAGCTATGCCGCACCGAACACGACCTATGACTGCGCTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCTAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGTTTTCTTCCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAAGAGAACTGTGTCATCAGCAACACGAAGCTGCGATCGGGAAGAGCGTTTAGAATACAGACGAGCATCTAAATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGAATTGGACCATTAGATTCACAAGCTGTCATGGTTGATATGTCATAA

Coding sequence (CDS)

ATGCCGCACCGAACACGACCTATGACTGCGCTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCTAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGTTTTCTTCCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAAGAGAACTGTGTCATCAGCAACACGAAGCTGCGATCGGGAAGAGCGTTTAGAATACAGACGAGCATCTAAATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGAATTGGACCATTAGATTCACAAGCTGTCATGGTTGATATGTCATAA

Protein sequence

MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERRFSSWISLCSNHPVSSNIPEYVKRTVSSATRSCDREERLEYRRASKLHLSSPYCDLCRIGPLDSQAVMVDMS

Homology

[Close]

BLAST of CmaCh03G001360 vs. ExPASy TrEMBL
Match: A0A6J1HS71 (uncharacterized protein LOC111466268 OS=Cucurbita maxima OX=3661 GN=LOC111466268 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTIT VYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. ExPASy TrEMBL
Match: A0A6J1EUP9 (uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC111438118 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTIT VYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. ExPASy TrEMBL
Match: A0A6J1DM83 (uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021335 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTIT VYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. ExPASy TrEMBL
Match: A0A6P3YS46 (uncharacterized protein LOC107403960 OS=Ziziphus jujuba OX=326968 GN=LOC107403960 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNV+LVSTIT VYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVILVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. ExPASy TrEMBL
Match: A0A1S3C1N0 (uncharacterized protein LOC103495817 OS=Cucumis melo OX=3656 GN=LOC103495817 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.9e-13
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPM ALLVFTGLNVVLVSTIT VYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMAALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. NCBI nr
Match: KAG7027425.1 (hypothetical protein SDJN02_11438 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-13
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERRFSSWISL 49
          MPHRTRPMTALLVFTGLNVVLVSTIT VYDF+CFHPYWERR    +SL
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRDICKVSL 48

[Close]

BLAST of CmaCh03G001360 vs. NCBI nr
Match: KAG7033591.1 (hypothetical protein SDJN02_03315 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTIT VYDFICFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. NCBI nr
Match: XP_031740521.1 (uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharacterized protein LOC101220293 [Cucumis sativus] >KAE8649679.1 hypothetical protein Csa_012121 [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTIT VYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. NCBI nr
Match: XP_038882345.1 (uncharacterized protein LOC120073600 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTIT VYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. NCBI nr
Match: XP_022153946.1 (uncharacterized protein LOC111021335 [Momordica charantia])

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTIT VYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of CmaCh03G001360 vs. TAIR 10
Match: AT5G09225.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 7.6e-13
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERR 42
          MPHRTRP+  LL+FTG+N VLV TIT VYDF+CF PYWERR
Sbjct: 1  MPHRTRPLKGLLLFTGINFVLVQTITPVYDFVCFLPYWERR 41

The following BLAST results are available for this feature:

BLAST of CmaCh03G001360 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G001360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HS71	1.5e-13	95.12	uncharacterized protein LOC111466268 OS=Cucurbita maxima OX=3661 GN=LOC111466268...	[more]
A0A6J1EUP9	1.5e-13	95.12	uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC1114381...	[more]
A0A6J1DM83	1.5e-13	95.12	uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6P3YS46	2.0e-13	92.68	uncharacterized protein LOC107403960 OS=Ziziphus jujuba OX=326968 GN=LOC10740396...	[more]
A0A1S3C1N0	5.9e-13	92.68	uncharacterized protein LOC103495817 OS=Cucumis melo OX=3656 GN=LOC103495817 PE=...	[more]

BLAST of CmaCh03G001360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027425.1	1.9e-13	85.42	hypothetical protein SDJN02_11438 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG7033591.1	2.4e-13	97.56	hypothetical protein SDJN02_03315 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_031740521.1	3.2e-13	95.12	uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharact...	[more]
XP_038882345.1	3.2e-13	95.12	uncharacterized protein LOC120073600 [Benincasa hispida]	[more]
XP_022153946.1	3.2e-13	95.12	uncharacterized protein LOC111021335 [Momordica charantia]	[more]

BLAST of CmaCh03G001360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09225.1	7.6e-13	75.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36392	TRANSMEMBRANE PROTEIN	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G001360.1	CmaCh03G001360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane