CmaCh02G017320 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G017320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein NPGR2-like
Location	Cma_Chr02: 9733140 .. 9737837 (-)
RNA-Seq Expression	CmaCh02G017320
Synteny	CmaCh02G017320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGCCACGTGGCAAAAGGTAAGCCTCAGACAACGTGGTAACTTGCGAGTCTGGGACCCGAATTTCCCTTTGCCTTCATAAAAAGAAATATTAATAAAACCCCCCCAAGGCTTAAGATCGTCTTCTCTAGGATTACTGTTTTCCTCGATTTTCCATTTTTTCTCTTCTTTTCTTTTGGTTCCTTGTTTTCATCCGAAACCAAACCTCAGAGTTTGGTGAAAGTAGCAAAACAAAAGAAGGCCAAACAATAAAGTTGAAAATTGTTTAAGCTTTCGTCTGCTTTTTGGACGCTTTTAATTTCAAAATGATTCAAAAGAGGTCTTGATCGATTGTTCAAGAGAATTCAAGTCATGGGTATTGCTGTTTCTGGATTTTGCCTTCCCTCGCTCTTCTTTTACCTTTGGGAGAATGAAAGGTGTTTATTCTTGCTCTCTATACTCCTCTGCTTAGATTTTTTTTAGTCGCTTCGATTGTTCCTGTGAATGATTCTGGGTTCTTGTGAATTTTCAAATTTCGTTCTGAACTATTCTGATTTCTTTTGGCTTTTCGTTGATGGAATTTGCTTGGAGGAGGCTGAAGCTGAATGTAATGGTTTGATTTTTAAGGTGGGGTTTTAAAATGAAGGGGGCTTTAGGGGTTTTTCAATTCTTCTGAAGCTTTTCTTGGAGTTCAAGGATACCATGTTTAGGGTTTTGAAAATTGAAGACATGTTTTCCTTGTTGCTTGAGTTTGGGTCTACTGTATAATCTGAGGAAAATTTGTGGCTCGGAAATTGGGCTGATGATCGAAATAGAAGTTACAGAAGTGTTGTTATGATTGATTTTGTTTATGAATTTATATTTGATGGTGAGTTTCTTTTGTGGTTGAAGATCTTTGGCTGCTGTCAAACAATATGAAGAGTGATGTTAAGATAAAATGGCGGCGGAGAGCTGGAAAAGGGGAGAACATTAGGAAGATAATGAAGTGTTTATGTTCTGGAGAGAAAAGAGCTGGTGATGATATGATTCCTGCATCAGAATTGCAGTCAACATTGGAGAATTCAGCAAGCGAACACTCCTCACGAATCGGCGGGATTGTCATGAAGCCAGAAATTGGCAATATAGAAGAAGCCGAGTCTTCGCTTCGTGAGAGCGGTTGCTTGAATTATGAGGTTAGAGTCCTTAAGCTTCCTAGATTGCAAGTTAACTTTCTTGATTCATTGTTTCATTTTCAGAGGATCCCATGGAACAAAGAAGGAACAAGTTCTTGTTTTTTTATCACATGTTTGTCACAATCCAGAGGAAGCAAGTTAGTATAGTGAAAAAAAACACATAAACATGCTTCTTTCTGGTGCTTTATGATCAAAATCTTTTGAAAATTGAATGTAAATTGATCTCTGCTTGTATGAGTTTTCAGTCAGTATATTGTTTTACATAAACAAAGTTTAGTGACAGAACTTTATAGTAGTTTATATGGGAATCATGAAAATAAATTGGAGCTAAACATCTCTATATTGATATGTTGTTTGAAGGAAGCAAGAGCATTGCTGGGAAGATATGAATATCAAAAAGGAAACATCGAAGCTGCTCTTCATGTATTTGAAGGAATAGATATCACTGCAGTAACTAGTAAGATAATGATCTCCATTGCTAGAACAGGACACCGTGCAAGGAGACGATCGCAACGTTTTAGTGACCCACCAATGTCTATGCATGCTGTTAGTTTACTGTTGGAAGCCATCTTTTTAAAAGCAAAATCATTGCAAGGCCTTGGGAGGTTTGGAGGTACTGTTTGTTAGTTGAGCCTCTCGAATCTATTTCTTTTGGTCAAATGTCTTTCAACTCTGGTGTTGAATTTTGGTTGGAATATGAGGATTCGGTCTAGTTTTCTTTTTTGGGGGTTGTTCGAACAAAAGGGGAAAGACGATTTGAGCTGATTATAAGAGTAAAAGCATTAATTTGTAGCTGATCTATGTTTTCCCCTATTATTGCAGAAGCTGCTCAATCTTGCAAAGTTATTCTGGACATACTTGAATCTTCATTTCCCGAAGGGTTGCCTGAAAACTTTGGTGCTGATTGTAAATTGCAGGACACAGTAACGAAAGCCGTTGAGTTGATACCAGAACTATGGAAACAAGGCGATTCTTCTCAAGAAGCGATCCTTTCATATCGGCGGGCACTCCTTCATCAATGGAACCTCGATGCGGGAACCACCGCTCGAATTCAGAAAGAGTTTGCTATTTTTCTTCTGTACAGTGGAAATGAAGCATACCCTCCAAATCTCCGGTCTCAAATGGACAGCTCATTTGTACCAAAAAACAATAATGAAGAAGCTATACTCATATTTATGATACTACTTAGAAAAGTTGTTCTGAAGAGGATTGATTGGGATCCATCAATCTTGGATCACCTCTCCTTTGCACTAACAATATCAGGGGATACAAGCGCTTTGGCAGGTCAAGTAGAGGAATTGCCTCCTGGGATTCTGCATAGAAACGATAGGTACCATACTCTAGCTCTTTGTTACTATGGAGCTGGAGAAGACTTGGCTGCTTTGAATCTTTTGAGGAAATTGTTGGGCAGTCATGAGGATTCTAAATCTCTTCCTGCTTTATTAATGGCGTCAAAGATTTGTGGAGAGCACGGTGATCATGCTGAAGAAGGAACACGTTATGCTCGTCGAGCTCTTCAAAAGTTGGATGCTGGATGTGATCAATTGATAGGTGTTGCCAACTGTTTGTTGGGTGTCTCTCTGTCTGTATATTCTAAATCAGCAGTTGCAGATTCTGAGCGGTCCTCCAGACAATCTGAGGCGATAGAGGCCCTGGAAGCTGCACGGAAGAAGACTCGAATGACCAATGCTAATGTTCTCTACCATTTGAGTGTTGAATATGCTGATGAGAGGAAGTTGGATTCAGCACTTCATTTTGCAAAGAAGTGTCTCAAACTGGAAGGTGGATCTAATATTAGAACTTGGTTACTGGTGGCTAGGATTCTCTCTGCCCTGAAACGATTCGTGGATGGCGAAAATATTATAAATGCAGCTCTGGAGCAGACTGGGAAATGGGATCAAGGCGAATTGCTTCGAACAAAAGCAAAGCTTTTGATTGCACAAGATGAGCTGAAAGGTGCTATTGGGACTTATACTCAGTTACTCGCTGTTTTTCAAGTTCAGAGTAAAAGTTTTGGCTTGGGAGATAAGAAGCTACATAAGGTTTATTTCTGTATTTGGGGTTTCTATCAATTCATTCTGATAGTTTGAACATGAATTTTCATTTGTAGTTATTTCAGGATTGATTTACATGCGAATAAATTACACAAGTCTCCTAAGAGATTCCACGTCGGTTGGAGAGGAGAACGAAACATTCTTTGTAAGGGTGTGGAAATCTCTCCCTAACAGGCACGTTTTAAAAACCTTGAGGAAAAGCTCGAAAAGGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGCCTTGGACTGTTACAAATGGTATTACAAATGGTATTACAAAAGGTATCAGAGCTAGACACTGGACGTTGTGCCAGCGAGGAGGTTTAGCCCCGAAAGGCGGGTGGACACGAGACACTATGCCATCAAGGACGTTGGGCCCCAAATGCGGGTGGATTGGGGGGTCCCACATTGATTGAGAAAGAGAACAAAGCATTGTTTATAAGAGTGGAAACTTCTCCCTAGCAGACGGTGTTTTAAAAACTTTGAGGGAGAAGCTCAAAGAGGACAATATCTGCTAGCGGTTGGATTGGGCTGTTACATTAAGCCTTGCAATTTGAATATATTTTTGTAATTCGTGATATGTTTCCATTTTCGCTCATGGATCGTTATATCTTAATCTTGTTTTGGATGTATCATTCACCATTGCTGACGTTTAATCGTTGTCGGTACCTCCCTTTGACAGAGCAGCAGAAATTGTATCAGAAGTTTGCAATTGGAAGTGTGGCATGATTTAGCTCTAGTCTATATAAGGCTTTCACAATGGCACAATGCCGAGGCTTGCCTTTCCAAGTCAAAGGCCATCCATTCTCATTCGGCATCTAGATGTCATCTCACAGGTAACTCCTTAACATCATATGAATTATCTTATCATTACTTCATTTTTAGCTTCTCTTCTCCTTAATACACGAATCTGAAGATGATATCTTGTGATTTGAACATCACAACAAGATTTTTCATCCAAGTTTTTAGTTCAATCATCTGAGGTTGATGTTTGGAGCTTGCTCATTGATTACAGGTATGCTTTATGAAGCAAAAGGATTGTATAAGGAAGCTTTGAAAGCTTTTATGGCTGCTCTGGACATCGATCCCGTTCATGTCCCGAGCTTGGTTTCGTCTTCCGTAGTTATCAGACGTCTTGGCCACCAATCGCACCCCGTTGTTCGCAGCTTTTTGATGGATGCTGTACGTCTCAACCAGACAAACCACGCTGCGTGGTACAATCTCGGGCTATTCTACAGAGCTGAAGGAACCAAATCTTCATTGGCAGAAGCTGTTGAATGTTTTGAGGCTGCAACATTTCTTGAAGAGACTGCTCCTGTCGAACCCTTCAGATAAAACATCTCTGCTCATGTAATTTTTTGAAACAAAGTATTTTCCTTGTATCTTCTGCTTCATAATCTATTTTACACCCTCATTGTACAACAGAAAATTAATAAATGAAAAGTTTCTCTCTGTTTCTGGATGGTTTCAGTTCCATCTATCAAA

mRNA sequence

ATGTGTGCCACGTGGCAAAAGGTAAGCCTCAGACAACGTGATCTTTGGCTGCTGTCAAACAATATGAAGAGTGATGTTAAGATAAAATGGCGGCGGAGAGCTGGAAAAGGGGAGAACATTAGGAAGATAATGAAGTGTTTATGTTCTGGAGAGAAAAGAGCTGGTGATGATATGATTCCTGCATCAGAATTGCAGTCAACATTGGAGAATTCAGCAAGCGAACACTCCTCACGAATCGGCGGGATTGTCATGAAGCCAGAAATTGGCAATATAGAAGAAGCCGAGTCTTCGCTTCGTGAGAGCGGTTGCTTGAATTATGAGGAAGCAAGAGCATTGCTGGGAAGATATGAATATCAAAAAGGAAACATCGAAGCTGCTCTTCATGTATTTGAAGGAATAGATATCACTGCAGTAACTAGTAAGATAATGATCTCCATTGCTAGAACAGGACACCGTGCAAGGAGACGATCGCAACGTTTTAGTGACCCACCAATGTCTATGCATGCTGTTAGTTTACTGTTGGAAGCCATCTTTTTAAAAGCAAAATCATTGCAAGGCCTTGGGAGGTTTGGAGAAGCTGCTCAATCTTGCAAAGTTATTCTGGACATACTTGAATCTTCATTTCCCGAAGGGTTGCCTGAAAACTTTGGTGCTGATTGTAAATTGCAGGACACAGTAACGAAAGCCGTTGAGTTGATACCAGAACTATGGAAACAAGGCGATTCTTCTCAAGAAGCGATCCTTTCATATCGGCGGGCACTCCTTCATCAATGGAACCTCGATGCGGGAACCACCGCTCGAATTCAGAAAGAGTTTGCTATTTTTCTTCTGTACAGTGGAAATGAAGCATACCCTCCAAATCTCCGGTCTCAAATGGACAGCTCATTTGTACCAAAAAACAATAATGAAGAAGCTATACTCATATTTATGATACTACTTAGAAAAGTTGTTCTGAAGAGGATTGATTGGGATCCATCAATCTTGGATCACCTCTCCTTTGCACTAACAATATCAGGGGATACAAGCGCTTTGGCAGGTCAAGTAGAGGAATTGCCTCCTGGGATTCTGCATAGAAACGATAGGTACCATACTCTAGCTCTTTGTTACTATGGAGCTGGAGAAGACTTGGCTGCTTTGAATCTTTTGAGGAAATTGTTGGGCAGTCATGAGGATTCTAAATCTCTTCCTGCTTTATTAATGGCGTCAAAGATTTGTGGAGAGCACGGTGATCATGCTGAAGAAGGAACACGTTATGCTCGTCGAGCTCTTCAAAAGTTGGATGCTGGATGTGATCAATTGATAGGTGTTGCCAACTGTTTGTTGGGTGTCTCTCTGTCTGTATATTCTAAATCAGCAGTTGCAGATTCTGAGCGGTCCTCCAGACAATCTGAGGCGATAGAGGCCCTGGAAGCTGCACGGAAGAAGACTCGAATGACCAATGCTAATGTTCTCTACCATTTGAGTGTTGAATATGCTGATGAGAGGAAGTTGGATTCAGCACTTCATTTTGCAAAGAAGTGTCTCAAACTGGAAGGTGGATCTAATATTAGAACTTGGTTACTGGTGGCTAGGATTCTCTCTGCCCTGAAACGATTCGTGGATGGCGAAAATATTATAAATGCAGCTCTGGAGCAGACTGGGAAATGGGATCAAGGCGAATTGCTTCGAACAAAAGCAAAGCTTTTGATTGCACAAGATGAGCTGAAAGGTGCTATTGGGACTTATACTCAGTTACTCGCTGTTTTTCAAGTTCAGAGTAAAAGTTTTGGCTTGGGAGATAAGAAGCTACATAAGAGCAGCAGAAATTGTATCAGAAGTTTGCAATTGGAAGTGTGGCATGATTTAGCTCTAGTCTATATAAGGCTTTCACAATGGCACAATGCCGAGGCTTGCCTTTCCAAGTCAAAGGCCATCCATTCTCATTCGGCATCTAGATGTCATCTCACAGGTATGCTTTATGAAGCAAAAGGATTGTATAAGGAAGCTTTGAAAGCTTTTATGGCTGCTCTGGACATCGATCCCGTTCATGTCCCGAGCTTGGTTTCGTCTTCCGTAGTTATCAGACGTCTTGGCCACCAATCGCACCCCGTTGTTCGCAGCTTTTTGATGGATGCTGTACGTCTCAACCAGACAAACCACGCTGCGTGGTACAATCTCGGGCTATTCTACAGAGCTGAAGGAACCAAATCTTCATTGGCAGAAGCTGTTGAATGTTTTGAGGCTGCAACATTTCTTGAAGAGACTGCTCCTGTCGAACCCTTCAGATAAAACATCTCTGCTCATGTAATTTTTTGAAACAAAGTATTTTCCTTGTATCTTCTGCTTCATAATCTATTTTACACCCTCATTGTACAACAGAAAATTAATAAATGAAAAGTTTCTCTCTGTTTCTGGATGGTTTCAGTTCCATCTATCAAA

Coding sequence (CDS)

ATGTGTGCCACGTGGCAAAAGGTAAGCCTCAGACAACGTGATCTTTGGCTGCTGTCAAACAATATGAAGAGTGATGTTAAGATAAAATGGCGGCGGAGAGCTGGAAAAGGGGAGAACATTAGGAAGATAATGAAGTGTTTATGTTCTGGAGAGAAAAGAGCTGGTGATGATATGATTCCTGCATCAGAATTGCAGTCAACATTGGAGAATTCAGCAAGCGAACACTCCTCACGAATCGGCGGGATTGTCATGAAGCCAGAAATTGGCAATATAGAAGAAGCCGAGTCTTCGCTTCGTGAGAGCGGTTGCTTGAATTATGAGGAAGCAAGAGCATTGCTGGGAAGATATGAATATCAAAAAGGAAACATCGAAGCTGCTCTTCATGTATTTGAAGGAATAGATATCACTGCAGTAACTAGTAAGATAATGATCTCCATTGCTAGAACAGGACACCGTGCAAGGAGACGATCGCAACGTTTTAGTGACCCACCAATGTCTATGCATGCTGTTAGTTTACTGTTGGAAGCCATCTTTTTAAAAGCAAAATCATTGCAAGGCCTTGGGAGGTTTGGAGAAGCTGCTCAATCTTGCAAAGTTATTCTGGACATACTTGAATCTTCATTTCCCGAAGGGTTGCCTGAAAACTTTGGTGCTGATTGTAAATTGCAGGACACAGTAACGAAAGCCGTTGAGTTGATACCAGAACTATGGAAACAAGGCGATTCTTCTCAAGAAGCGATCCTTTCATATCGGCGGGCACTCCTTCATCAATGGAACCTCGATGCGGGAACCACCGCTCGAATTCAGAAAGAGTTTGCTATTTTTCTTCTGTACAGTGGAAATGAAGCATACCCTCCAAATCTCCGGTCTCAAATGGACAGCTCATTTGTACCAAAAAACAATAATGAAGAAGCTATACTCATATTTATGATACTACTTAGAAAAGTTGTTCTGAAGAGGATTGATTGGGATCCATCAATCTTGGATCACCTCTCCTTTGCACTAACAATATCAGGGGATACAAGCGCTTTGGCAGGTCAAGTAGAGGAATTGCCTCCTGGGATTCTGCATAGAAACGATAGGTACCATACTCTAGCTCTTTGTTACTATGGAGCTGGAGAAGACTTGGCTGCTTTGAATCTTTTGAGGAAATTGTTGGGCAGTCATGAGGATTCTAAATCTCTTCCTGCTTTATTAATGGCGTCAAAGATTTGTGGAGAGCACGGTGATCATGCTGAAGAAGGAACACGTTATGCTCGTCGAGCTCTTCAAAAGTTGGATGCTGGATGTGATCAATTGATAGGTGTTGCCAACTGTTTGTTGGGTGTCTCTCTGTCTGTATATTCTAAATCAGCAGTTGCAGATTCTGAGCGGTCCTCCAGACAATCTGAGGCGATAGAGGCCCTGGAAGCTGCACGGAAGAAGACTCGAATGACCAATGCTAATGTTCTCTACCATTTGAGTGTTGAATATGCTGATGAGAGGAAGTTGGATTCAGCACTTCATTTTGCAAAGAAGTGTCTCAAACTGGAAGGTGGATCTAATATTAGAACTTGGTTACTGGTGGCTAGGATTCTCTCTGCCCTGAAACGATTCGTGGATGGCGAAAATATTATAAATGCAGCTCTGGAGCAGACTGGGAAATGGGATCAAGGCGAATTGCTTCGAACAAAAGCAAAGCTTTTGATTGCACAAGATGAGCTGAAAGGTGCTATTGGGACTTATACTCAGTTACTCGCTGTTTTTCAAGTTCAGAGTAAAAGTTTTGGCTTGGGAGATAAGAAGCTACATAAGAGCAGCAGAAATTGTATCAGAAGTTTGCAATTGGAAGTGTGGCATGATTTAGCTCTAGTCTATATAAGGCTTTCACAATGGCACAATGCCGAGGCTTGCCTTTCCAAGTCAAAGGCCATCCATTCTCATTCGGCATCTAGATGTCATCTCACAGGTATGCTTTATGAAGCAAAAGGATTGTATAAGGAAGCTTTGAAAGCTTTTATGGCTGCTCTGGACATCGATCCCGTTCATGTCCCGAGCTTGGTTTCGTCTTCCGTAGTTATCAGACGTCTTGGCCACCAATCGCACCCCGTTGTTCGCAGCTTTTTGATGGATGCTGTACGTCTCAACCAGACAAACCACGCTGCGTGGTACAATCTCGGGCTATTCTACAGAGCTGAAGGAACCAAATCTTCATTGGCAGAAGCTGTTGAATGTTTTGAGGCTGCAACATTTCTTGAAGAGACTGCTCCTGTCGAACCCTTCAGATAA

Protein sequence

MCATWQKVSLRQRDLWLLSNNMKSDVKIKWRRRAGKGENIRKIMKCLCSGEKRAGDDMIPASELQSTLENSASEHSSRIGGIVMKPEIGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMISIARTGHRARRRSQRFSDPPMSMHAVSLLLEAIFLKAKSLQGLGRFGEAAQSCKVILDILESSFPEGLPENFGADCKLQDTVTKAVELIPELWKQGDSSQEAILSYRRALLHQWNLDAGTTARIQKEFAIFLLYSGNEAYPPNLRSQMDSSFVPKNNNEEAILIFMILLRKVVLKRIDWDPSILDHLSFALTISGDTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRKLLGSHEDSKSLPALLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVSLSVYSKSAVADSERSSRQSEAIEALEAARKKTRMTNANVLYHLSVEYADERKLDSALHFAKKCLKLEGGSNIRTWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIAQDELKGAIGTYTQLLAVFQVQSKSFGLGDKKLHKSSRNCIRSLQLEVWHDLALVYIRLSQWHNAEACLSKSKAIHSHSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSSVVIRRLGHQSHPVVRSFLMDAVRLNQTNHAAWYNLGLFYRAEGTKSSLAEAVECFEAATFLEETAPVEPFR

Homology

[Close]

BLAST of CmaCh02G017320 vs. ExPASy Swiss-Prot
Match: Q66GN3 (Protein NPGR2 OS=Arabidopsis thaliana OX=3702 GN=NPGR2 PE=1 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 3.1e-224
Identity = 427/727 (58.73%), Postives = 536/727 (73.73%), Query Frame = 0


Query: 38  ENIRKI-MKCLCSGEK-RAGDDMIPASELQSTLE-NSASEHSSRIGGIVMKPEIGNIEEA 97
           +++RKI MKCLCSGE+ R  ++    SE+    + N +S  S+       K + GNIEEA
Sbjct: 18  KSLRKIRMKCLCSGEQMRHREEEDKKSEVGVGRDYNGSSALSTAESENAKKLDNGNIEEA 77

Query: 98  ESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMISI-ARTGHRA 157
           E SLRE+  LNYEEARALLGR EYQKGNIEAAL VFEGIDI  +T K+  ++  R   + 
Sbjct: 78  ELSLRETSSLNYEEARALLGRIEYQKGNIEAALRVFEGIDINGITVKMKTALTVREDRKH 137

Query: 158 RRRSQ-RFS---DPPMSMHAVSLLLEAIFLKAKSLQGLGRFGEAAQSCKVILDILESSFP 217
           RRRS+  FS    P MS HAVSLL EAIFLKAKSLQ LGRF EAA+SC+VILDI+E+S  
Sbjct: 138 RRRSKGGFSTAPSPAMSKHAVSLLFEAIFLKAKSLQRLGRFQEAAESCRVILDIVETSLA 197

Query: 218 EGLPENFGADCKLQDTVTKAVELIPELWKQGDSSQEAILSYRRALLHQWNLDAGTTARIQ 277
           EG  +N   D KLQ+T+TKAVEL+PELWK  DS ++AILSYRRALL+ W LD  TTARIQ
Sbjct: 198 EGASDNVTGDIKLQETLTKAVELLPELWKLADSPRDAILSYRRALLNHWKLDPETTARIQ 257

Query: 278 KEFAIFLLYSGNEAYPPNLRSQMDSSFVPKNNNEEAILIFMILLRKVVLKRIDWDPSILD 337
           KE+A+FLLYSG EA PPNLRSQ + SF+P+NN EEAIL+ M+LLRKV LKRI WD +ILD
Sbjct: 258 KEYAVFLLYSGEEAVPPNLRSQTEGSFIPRNNVEEAILLLMLLLRKVNLKRISWDAAILD 317

Query: 338 HLSFALTISGDTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRKLLGSH 397
           HLSFALTI+GD +ALA Q EEL P +L + + YHTL+LCY GAGE L AL LLRKL    
Sbjct: 318 HLSFALTIAGDLTALAKQFEELSPELLDQRELYHTLSLCYQGAGEGLVALGLLRKLFSER 377

Query: 398 EDSKSLPALLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVSLSVYS 457
           ED      LLMASKICGE    AEEG  YAR+A+  L   C QL G A  +LG++L+  S
Sbjct: 378 EDPNRTSGLLMASKICGERSGLAEEGLDYARKAIGNLGKECSQLDGAARFVLGITLTESS 437

Query: 458 KSAVADSERSSRQSEAIEALEAARKKTRMTNANVLYHLSVEYADERKLDSALHFAKKCLK 517
           + AV ++ER +RQSE I+ALE+A     MTN  V++ L++E A++RKLDSAL +AK+ LK
Sbjct: 438 RMAVTETERIARQSEGIQALESA----DMTNPRVVHRLALENAEQRKLDSALAYAKEALK 497

Query: 518 LEGGSNIRTWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIAQDELK 577
           L   S++  WLL+AR+LSA KRF D E I++AAL +TGKW+QG+LLR KAKL +A+ E+K
Sbjct: 498 LGAESDLEVWLLLARVLSAQKRFSDAETIVDAALNETGKWEQGKLLRLKAKLRLAKGEVK 557

Query: 578 GAIGTYTQLLAVFQVQSKSFGLGDKKLHKSSRNCIRSLQLEVWHDLALVYIRLSQWHNAE 637
            AI TYTQLLA+ QVQSKSF    KKL K     + SL+L  WHDLA +YI LSQW +AE
Sbjct: 558 DAIKTYTQLLALLQVQSKSFN-SAKKLPKGYVKELMSLELGTWHDLAHIYINLSQWRDAE 617

Query: 638 ACLSKSKAIHSHSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSSVVIRR 697
           +CLS+S+ I  +S+ R H+ G+LY  +G  +EA++AF  ALDIDP+HVPSL S + ++  
Sbjct: 618 SCLSRSRLIAPYSSVRYHIEGVLYNRRGQLEEAMEAFTTALDIDPMHVPSLTSKAEILLE 677

Query: 698 LGHQSH-PVVRSFLMDAVRLNQTNHAAWYNLGLFYRAEGTKSSLAEAVECFEAATFLEET 756
           +G++S   VVRSFLM+A+R+++ NH+AWYNLG  ++AEG+ SS+ EAVECF+AA  LEET
Sbjct: 678 VGNRSGIAVVRSFLMEALRIDRLNHSAWYNLGKMFKAEGSVSSMQEAVECFQAAVTLEET 737

[Close]

BLAST of CmaCh02G017320 vs. ExPASy Swiss-Prot
Match: Q8GZN1 (Protein NPG1 OS=Arabidopsis thaliana OX=3702 GN=NPG1 PE=1 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.0e-162
Identity = 314/673 (46.66%), Postives = 441/673 (65.53%), Query Frame = 0


Query: 85  KPEIGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMI 144
           K + GNI+EAESSLRE   LN+EEARALLGR EYQ+GN+E AL VFEGID+ A   ++ +
Sbjct: 36  KLDEGNIQEAESSLREGLSLNFEEARALLGRLEYQRGNLEGALRVFEGIDLQAAIQRLQV 95

Query: 145 SIARTGHRARRRSQRFSDPPMSMHAVSLLLEAIFLKAKSLQGLGRFGEAAQSCKVILDIL 204
           S+       ++   R     +S HA +L+LEAI+LKAKSLQ LGR  EAA  CK +LD +
Sbjct: 96  SVPLEKPATKKNRPREPQQSVSQHAANLVLEAIYLKAKSLQKLGRITEAAHECKSVLDSV 155

Query: 205 ESSFPEGLPENFGADCKLQDTVTKAVELIPELWKQGDSSQEAILSYRRALLHQWNLDAGT 264
           E  F +G+P+    D KLQ+TV+ AVEL+P LWK+    QEAI +YRRALL QWNLD   
Sbjct: 156 EKIFQQGIPD-AQVDNKLQETVSHAVELLPALWKESGDYQEAISAYRRALLSQWNLDNDC 215

Query: 265 TARIQKEFAIFLLYSGNEAYPPNLRSQMDSSFVPKNNNEEAILIFMILLRKVVLKRIDWD 324
            ARIQK+FA+FLL+SG EA PP+L SQ++ S++P+NN EEAIL+ MILL+K  L +  WD
Sbjct: 216 CARIQKDFAVFLLHSGVEASPPSLGSQIEGSYIPRNNIEEAILLLMILLKKFNLGKAKWD 275

Query: 325 PSILDHLSFALTISGDTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRK 384
           PS+ +HL+FAL++   T+ LA Q+EE+ PG+  R +R++TLAL Y  AG++ AA+NLLRK
Sbjct: 276 PSVFEHLTFALSLCSQTAVLAKQLEEVMPGVFSRIERWNTLALSYSAAGQNSAAVNLLRK 335

Query: 385 LLGSHEDSKSLPALLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVS 444
            L  HE    L ALL+A+K+C E    A EGT YA+RA+       + L GV   +LG+ 
Sbjct: 336 SLHKHEQPDDLVALLLAAKLCSEEPSLAAEGTGYAQRAINNAQGMDEHLKGVGLRMLGLC 395

Query: 445 LSVYSKSAVADSERSSRQSEAIEALEAARKKTRMTNANVLYHLSVEYADERKLDSALHFA 504
           L   +K   +D ERS  QSE+++AL+ A       N ++++ L V+YA++R L +A  +A
Sbjct: 396 LGKQAKVPTSDFERSRLQSESLKALDGA-IAFEHNNPDLIFELGVQYAEQRNLKAASRYA 455

Query: 505 KKCLKLEGGSNIRTWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIA 564
           K+ +   GGS ++ W  +A +LSA +RF + E + +AAL++T KWDQG LLR KAKL I+
Sbjct: 456 KEFIDATGGSVLKGWRFLALVLSAQQRFSEAEVVTDAALDETAKWDQGPLLRLKAKLKIS 515

Query: 565 QDELKGAIGTYTQLLAVFQVQSKSFGLGDKKLHKSSRNCIRSLQLEVWHDLALVYIRLSQ 624
           Q     A+ TY  LLA+ Q Q KSFG   + L +   + +   + EVWH LA +Y  LS 
Sbjct: 516 QSNPTEAVETYRYLLALVQAQRKSFG-PLRTLSQMEEDKVN--EFEVWHGLAYLYSSLSH 575

Query: 625 WHNAEACLSKSKAIHSHSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSS 684
           W++ E CL K+  +  +SAS  H  G ++E +  +K AL AF+  L +D   VP  V+  
Sbjct: 576 WNDVEVCLKKAGELKQYSASMLHTEGRMWEGRKEFKPALAAFLDGLLLDGSSVPCKVAVG 635

Query: 685 VVIRRLG--HQ-SHPVVRSFLMDAVRLNQTNHAAWYNLGLFYRAEGTKSSLAEAVECFEA 744
            ++   G  HQ + PV RS L DA+R++ TN  AWY LG+ ++++G    +A+A +CF+A
Sbjct: 636 ALLSERGKDHQPTLPVARSLLSDALRIDPTNRKAWYYLGMVHKSDG---RIADATDCFQA 695

Query: 745 ATFLEETAPVEPF 755
           A+ LEE+ P+E F
Sbjct: 696 ASMLEESDPIESF 700

[Close]

BLAST of CmaCh02G017320 vs. ExPASy Swiss-Prot
Match: Q9CB03 (Protein NPGR1 OS=Arabidopsis thaliana OX=3702 GN=NPGR1 PE=1 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 3.7e-140
Identity = 294/718 (40.95%), Postives = 438/718 (61.00%), Query Frame = 0


Query: 44  MKCLCSGEKRAGDDMIPASELQSTLENSASEHSSRIGG--IVMKPEIGNIEEAESSLRES 103
           M C CSGE+   +D   + E  +T + SAS  SSR GG     K E   ++EAES+L+E+
Sbjct: 1   MLCACSGEQFRFEDQPGSPESLATRDFSASGLSSRNGGGDWDSKLEDIQVDEAESTLKEA 60

Query: 104 GCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMISIARTGHRARRRSQRFS 163
             LNYEEARALLGR EYQ+GN +AAL VF+GIDI  +T +I+ +I       + RS+   
Sbjct: 61  LSLNYEEARALLGRLEYQRGNFDAALQVFKGIDIKVLTPRIIKAIVEKTLPCKPRSKAVI 120

Query: 164 DPP--MSMHAVSLLLEAIFLKAKSLQGLGRFGEAAQSCKVILDILESSFPEGLPENFGAD 223
            PP  MSMH+VSLLLEAI LKA+SL+ LG + EAA+ CK+ILD++E++ P G+P+     
Sbjct: 121 VPPTTMSMHSVSLLLEAILLKARSLEELGSYKEAAEECKIILDVVENALPSGMPDGISGF 180

Query: 224 CKLQDTVTKAVELIPELWKQGDSSQEAILSYRRALLHQWNLDAGTTARIQKEFAIFLLYS 283
            KLQD   KA+EL+P LWK+  +  E I SYRRAL   WNLD    A  QK  A+ LLY 
Sbjct: 181 AKLQDIFQKALELLPLLWKKAGNHHETIASYRRALSRPWNLDPQRLAVTQKSLALVLLYG 240

Query: 284 GNEAYPPNLRSQMDSSFVPKNNNEEAILIFMILLRKVVLKRIDWDPSILDHLSFALTISG 343
             EA              PK+N EEAI++ M+L++K+V+  I WDP ++DHL++AL+++G
Sbjct: 241 SVEA-------------CPKDNIEEAIVLLMLLVKKMVVGDIQWDPELMDHLTYALSMTG 300

Query: 344 DTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRKLLGSHEDSK--SLPA 403
               LA  +E+  PG+  R +R++ L+LCY  AG D AA+NLL+  LG  E  +   +P 
Sbjct: 301 QFEVLANYLEQTLPGVYTRGERWYLLSLCYSAAGIDKAAINLLKMALGPSESRQIPHIPL 360

Query: 404 LLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVSLSVYSKSAVADSE 463
           LL  +K+C +   H+ +G  +A R L   ++  + L+  A+  LGV     ++S+  DSE
Sbjct: 361 LLFGAKLCSKDPKHSRDGINFAHRLLDLGNSQSEHLLSQAHKFLGVCYGNAARSSKLDSE 420

Query: 464 RSSRQSEAIEAL-EAARKKTRMTNANVLYHLSVEYADERKLDSALHFAKKCLKLEGGSNI 523
           R   Q +++ +L EAA++       +V+++LSVE A +R + +AL  A +   + GG + 
Sbjct: 421 RVFLQKKSLFSLNEAAKRGKADPELDVIFNLSVENAVQRNVQAALDGAVEYSSMVGGVST 480

Query: 524 RTWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIAQDELKGAIGTYT 583
           + W  +A +LSA KR  D E+I++  +E+ G  ++ ELLR KA L +AQ++ K A+ T +
Sbjct: 481 KGWKHLAIVLSAEKRLKDAESILDFTMEEAGDIEKIELLRLKAVLQMAQEQPKKAMKTCS 540

Query: 584 QLLAVFQVQSKSFGLGDKKLHKSSRNCIRSLQLEVWHDLALVYIRLSQWHNAEACLSKSK 643
            LL + + Q KS         + S + ++  + E W DLA VY +L  W +AE CL K++
Sbjct: 541 SLLGLIRAQEKS---------EQSESLLQKFETEAWQDLASVYGKLGSWSDAETCLEKAR 600

Query: 644 AIHSHSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSSVVIRRLGHQSHP 703
           ++  +S    + TG+  EAK L++EAL +F  +L I+P HVPS+VS + V+ + G +S P
Sbjct: 601 SMCYYSPRGWNETGLCLEAKSLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLP 660

Query: 704 VVRSFLMDAVRLNQTNHAAWYNLGLFYRAEGTKSSLAEAVECFEAATFLEETAPVEPF 755
             +SFLM+A+RL+  NH AW  LG   + +G      +A E ++AA  LE +APV+ F
Sbjct: 661 TAKSFLMNALRLDPRNHDAWMKLGHVAKKQGLSQ---QAAEFYQAAYELELSAPVQSF 693

[Close]

BLAST of CmaCh02G017320 vs. ExPASy Swiss-Prot
Match: E9Q6P5 (Tetratricopeptide repeat protein 7B OS=Mus musculus OX=10090 GN=Ttc7b PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 7.4e-24
Identity = 126/533 (23.64%), Postives = 223/533 (41.84%), Query Frame = 0


Query: 293 DSSFVPKNNNEEAILIFMI----LLRKVVLKRIDWDPS-----------ILDHLSFALTI 352
           ++ F P+ N EEA+L+ +I      R  VL RI    S           + D L+ AL  
Sbjct: 316 ENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGR 375

Query: 353 SGDTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRKLLGSHEDSKSLPA 412
            G    L+  +E            ++  AL    AG+   A+ +L++ +    D  ++P 
Sbjct: 376 RGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIP- 435

Query: 413 LLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVSLSVYSKSAVADSE 472
            L+A+K+C       EE  ++A+  +  +     +        LG++ S+ +  A     
Sbjct: 436 -LLAAKLCVGSLHWLEEAEKFAKTVVD-VGEKTSEFKAKGYLALGLTYSLQATDASLRGM 495

Query: 473 RSSRQSEAIEALEAARKKTRMTNANVLYHLSVEYADERKLDSALHFAKKCLKLEGGSNIR 532
           +   Q +A+ A + A   +  T+    ++L+++ A  R++  AL + ++ L+L+ G +  
Sbjct: 496 QEGLQRKALLAFQRAHSLS-PTDHQAAFYLALQLAISRQIPEALGYVRQALQLQ-GDDAN 555

Query: 533 TWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIAQDELKGAIGTYTQ 592
           +  L+A +LSA K + D  NII+ AL +    +   LL +K KL         A+ T   
Sbjct: 556 SLHLLALLLSAQKHYHDALNIIDMALSEYP--ENFILLFSKVKLESLCRGPDEALLTCKH 615

Query: 593 LLAVFQ-----VQSKSFGLGDKKLHK--SSRNCIRSLQL--------------------- 652
           +L +++           G G   L +  + R  + ++ L                     
Sbjct: 616 MLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSVHATSVAASRV 675

Query: 653 ----------------------------EVWHDLALVYIRLSQWHNAEACLSKSKAIHSH 712
                                       ++W   A VYI + +   A AC  ++  +   
Sbjct: 676 EQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPM 735

Query: 713 SASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSSVVIRRLGHQSHPVVRSF 755
           S +  ++ G + E +G + EA + +  AL I P HV S+   ++V+ +LG  S  +    
Sbjct: 736 SHNVLYMRGQVAELRGHFDEARRWYEEALSISPTHVKSMQRLALVLHQLGRYS--LAEKI 795

[Close]

BLAST of CmaCh02G017320 vs. ExPASy Swiss-Prot
Match: Q9ULT0 (Tetratricopeptide repeat protein 7A OS=Homo sapiens OX=9606 GN=TTC7A PE=1 SV=3)

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-23
Identity = 133/534 (24.91%), Postives = 233/534 (43.63%), Query Frame = 0


Query: 293 DSSFVPKNNNEEAILIFMI----LLRKVVLKRIDWD-----------PSILDHLSFALTI 352
           D+ + PK+N EEA+L+ +I      R VVL R+               +I D LS  L  
Sbjct: 333 DNLYCPKDNIEEALLLLLISESMATRDVVLSRVPEQEEDRTVSLQNAAAIYDLLSITLGR 392

Query: 353 SGDTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRKLLGSHEDSKSLPA 412
            G    L+  +E            ++ +AL     G+   A++LLR+ +       ++P 
Sbjct: 393 RGQYVMLSECLERAMKFAFGEFHLWYQVALSMVACGKSAYAVSLLRECVKLRPSDPTVP- 452

Query: 413 LLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVSLSVYSKSAVADSE 472
            LMA+K+C       EE   +A   +  L     + +      LG++ S+ +  A   S+
Sbjct: 453 -LMAAKVCIGSLRWLEEAEHFAMMVI-SLGEEAGEFLPKGYLALGLTYSLQATDATLKSK 512

Query: 473 RSSRQSEAIEALEAARKKTRMTNANVLYHLSVEYADERKLDSALHFAKKCLKLEGGSNIR 532
           +     +A++ LE A ++   ++  V+ ++S++ A  R++ SA+   ++ LK+    +  
Sbjct: 513 QDELHRKALQTLERA-QQLAPSDPQVILYVSLQLALVRQISSAMEQLQEALKVR-KDDAH 572

Query: 533 TWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIAQDELKG---AIGT 592
              L+A + SA K      +++N A+  T   +   L+ TK KL   +  LKG   A+ T
Sbjct: 573 ALHLLALLFSAQKHHQHALDVVNMAI--TEHPENFNLMFTKVKL---EQVLKGPEEALVT 632

Query: 593 YTQLLAVFQV-----------QSKSFGLG-------------------DKKLHKSSRNCI 652
             Q+L ++Q            +  SFG G                   D    ++S    
Sbjct: 633 CRQVLRLWQTLYSFSQLGGLEKDGSFGEGLTMKKQSGMHLTLPDAHDADSGSRRASSIAA 692

Query: 653 RSLQ-----------------LEVWHDLALVYIR-----LSQWHNAEA--CLSKSKAIHS 712
             L+                 +++W  L  ++++     + Q H  EA  C+ ++  +  
Sbjct: 693 SRLEEAMSELTMPSSVLKQGPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCIQEAAGLFP 752

Query: 713 HSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSSVVIRRLGHQSHPVVRS 755
            S S  ++ G L E KG  +EA + +  AL ++P  V  + S  +++ RLGH+S  + + 
Sbjct: 753 TSHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRLGHKS--LAQK 812

[Close]

BLAST of CmaCh02G017320 vs. TAIR 10
Match: AT4G28600.1 (no pollen germination related 2 )

HSP 1 Score: 779.6 bits (2012), Expect = 2.2e-225
Identity = 427/727 (58.73%), Postives = 536/727 (73.73%), Query Frame = 0


Query: 38  ENIRKI-MKCLCSGEK-RAGDDMIPASELQSTLE-NSASEHSSRIGGIVMKPEIGNIEEA 97
           +++RKI MKCLCSGE+ R  ++    SE+    + N +S  S+       K + GNIEEA
Sbjct: 18  KSLRKIRMKCLCSGEQMRHREEEDKKSEVGVGRDYNGSSALSTAESENAKKLDNGNIEEA 77

Query: 98  ESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMISI-ARTGHRA 157
           E SLRE+  LNYEEARALLGR EYQKGNIEAAL VFEGIDI  +T K+  ++  R   + 
Sbjct: 78  ELSLRETSSLNYEEARALLGRIEYQKGNIEAALRVFEGIDINGITVKMKTALTVREDRKH 137

Query: 158 RRRSQ-RFS---DPPMSMHAVSLLLEAIFLKAKSLQGLGRFGEAAQSCKVILDILESSFP 217
           RRRS+  FS    P MS HAVSLL EAIFLKAKSLQ LGRF EAA+SC+VILDI+E+S  
Sbjct: 138 RRRSKGGFSTAPSPAMSKHAVSLLFEAIFLKAKSLQRLGRFQEAAESCRVILDIVETSLA 197

Query: 218 EGLPENFGADCKLQDTVTKAVELIPELWKQGDSSQEAILSYRRALLHQWNLDAGTTARIQ 277
           EG  +N   D KLQ+T+TKAVEL+PELWK  DS ++AILSYRRALL+ W LD  TTARIQ
Sbjct: 198 EGASDNVTGDIKLQETLTKAVELLPELWKLADSPRDAILSYRRALLNHWKLDPETTARIQ 257

Query: 278 KEFAIFLLYSGNEAYPPNLRSQMDSSFVPKNNNEEAILIFMILLRKVVLKRIDWDPSILD 337
           KE+A+FLLYSG EA PPNLRSQ + SF+P+NN EEAIL+ M+LLRKV LKRI WD +ILD
Sbjct: 258 KEYAVFLLYSGEEAVPPNLRSQTEGSFIPRNNVEEAILLLMLLLRKVNLKRISWDAAILD 317

Query: 338 HLSFALTISGDTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRKLLGSH 397
           HLSFALTI+GD +ALA Q EEL P +L + + YHTL+LCY GAGE L AL LLRKL    
Sbjct: 318 HLSFALTIAGDLTALAKQFEELSPELLDQRELYHTLSLCYQGAGEGLVALGLLRKLFSER 377

Query: 398 EDSKSLPALLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVSLSVYS 457
           ED      LLMASKICGE    AEEG  YAR+A+  L   C QL G A  +LG++L+  S
Sbjct: 378 EDPNRTSGLLMASKICGERSGLAEEGLDYARKAIGNLGKECSQLDGAARFVLGITLTESS 437

Query: 458 KSAVADSERSSRQSEAIEALEAARKKTRMTNANVLYHLSVEYADERKLDSALHFAKKCLK 517
           + AV ++ER +RQSE I+ALE+A     MTN  V++ L++E A++RKLDSAL +AK+ LK
Sbjct: 438 RMAVTETERIARQSEGIQALESA----DMTNPRVVHRLALENAEQRKLDSALAYAKEALK 497

Query: 518 LEGGSNIRTWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIAQDELK 577
           L   S++  WLL+AR+LSA KRF D E I++AAL +TGKW+QG+LLR KAKL +A+ E+K
Sbjct: 498 LGAESDLEVWLLLARVLSAQKRFSDAETIVDAALNETGKWEQGKLLRLKAKLRLAKGEVK 557

Query: 578 GAIGTYTQLLAVFQVQSKSFGLGDKKLHKSSRNCIRSLQLEVWHDLALVYIRLSQWHNAE 637
            AI TYTQLLA+ QVQSKSF    KKL K     + SL+L  WHDLA +YI LSQW +AE
Sbjct: 558 DAIKTYTQLLALLQVQSKSFN-SAKKLPKGYVKELMSLELGTWHDLAHIYINLSQWRDAE 617

Query: 638 ACLSKSKAIHSHSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSSVVIRR 697
           +CLS+S+ I  +S+ R H+ G+LY  +G  +EA++AF  ALDIDP+HVPSL S + ++  
Sbjct: 618 SCLSRSRLIAPYSSVRYHIEGVLYNRRGQLEEAMEAFTTALDIDPMHVPSLTSKAEILLE 677

Query: 698 LGHQSH-PVVRSFLMDAVRLNQTNHAAWYNLGLFYRAEGTKSSLAEAVECFEAATFLEET 756
           +G++S   VVRSFLM+A+R+++ NH+AWYNLG  ++AEG+ SS+ EAVECF+AA  LEET
Sbjct: 678 VGNRSGIAVVRSFLMEALRIDRLNHSAWYNLGKMFKAEGSVSSMQEAVECFQAAVTLEET 737

[Close]

BLAST of CmaCh02G017320 vs. TAIR 10
Match: AT2G43040.1 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 574.3 bits (1479), Expect = 1.4e-163
Identity = 314/673 (46.66%), Postives = 441/673 (65.53%), Query Frame = 0


Query: 85  KPEIGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMI 144
           K + GNI+EAESSLRE   LN+EEARALLGR EYQ+GN+E AL VFEGID+ A   ++ +
Sbjct: 36  KLDEGNIQEAESSLREGLSLNFEEARALLGRLEYQRGNLEGALRVFEGIDLQAAIQRLQV 95

Query: 145 SIARTGHRARRRSQRFSDPPMSMHAVSLLLEAIFLKAKSLQGLGRFGEAAQSCKVILDIL 204
           S+       ++   R     +S HA +L+LEAI+LKAKSLQ LGR  EAA  CK +LD +
Sbjct: 96  SVPLEKPATKKNRPREPQQSVSQHAANLVLEAIYLKAKSLQKLGRITEAAHECKSVLDSV 155

Query: 205 ESSFPEGLPENFGADCKLQDTVTKAVELIPELWKQGDSSQEAILSYRRALLHQWNLDAGT 264
           E  F +G+P+    D KLQ+TV+ AVEL+P LWK+    QEAI +YRRALL QWNLD   
Sbjct: 156 EKIFQQGIPD-AQVDNKLQETVSHAVELLPALWKESGDYQEAISAYRRALLSQWNLDNDC 215

Query: 265 TARIQKEFAIFLLYSGNEAYPPNLRSQMDSSFVPKNNNEEAILIFMILLRKVVLKRIDWD 324
            ARIQK+FA+FLL+SG EA PP+L SQ++ S++P+NN EEAIL+ MILL+K  L +  WD
Sbjct: 216 CARIQKDFAVFLLHSGVEASPPSLGSQIEGSYIPRNNIEEAILLLMILLKKFNLGKAKWD 275

Query: 325 PSILDHLSFALTISGDTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRK 384
           PS+ +HL+FAL++   T+ LA Q+EE+ PG+  R +R++TLAL Y  AG++ AA+NLLRK
Sbjct: 276 PSVFEHLTFALSLCSQTAVLAKQLEEVMPGVFSRIERWNTLALSYSAAGQNSAAVNLLRK 335

Query: 385 LLGSHEDSKSLPALLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVS 444
            L  HE    L ALL+A+K+C E    A EGT YA+RA+       + L GV   +LG+ 
Sbjct: 336 SLHKHEQPDDLVALLLAAKLCSEEPSLAAEGTGYAQRAINNAQGMDEHLKGVGLRMLGLC 395

Query: 445 LSVYSKSAVADSERSSRQSEAIEALEAARKKTRMTNANVLYHLSVEYADERKLDSALHFA 504
           L   +K   +D ERS  QSE+++AL+ A       N ++++ L V+YA++R L +A  +A
Sbjct: 396 LGKQAKVPTSDFERSRLQSESLKALDGA-IAFEHNNPDLIFELGVQYAEQRNLKAASRYA 455

Query: 505 KKCLKLEGGSNIRTWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIA 564
           K+ +   GGS ++ W  +A +LSA +RF + E + +AAL++T KWDQG LLR KAKL I+
Sbjct: 456 KEFIDATGGSVLKGWRFLALVLSAQQRFSEAEVVTDAALDETAKWDQGPLLRLKAKLKIS 515

Query: 565 QDELKGAIGTYTQLLAVFQVQSKSFGLGDKKLHKSSRNCIRSLQLEVWHDLALVYIRLSQ 624
           Q     A+ TY  LLA+ Q Q KSFG   + L +   + +   + EVWH LA +Y  LS 
Sbjct: 516 QSNPTEAVETYRYLLALVQAQRKSFG-PLRTLSQMEEDKVN--EFEVWHGLAYLYSSLSH 575

Query: 625 WHNAEACLSKSKAIHSHSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSS 684
           W++ E CL K+  +  +SAS  H  G ++E +  +K AL AF+  L +D   VP  V+  
Sbjct: 576 WNDVEVCLKKAGELKQYSASMLHTEGRMWEGRKEFKPALAAFLDGLLLDGSSVPCKVAVG 635

Query: 685 VVIRRLG--HQ-SHPVVRSFLMDAVRLNQTNHAAWYNLGLFYRAEGTKSSLAEAVECFEA 744
            ++   G  HQ + PV RS L DA+R++ TN  AWY LG+ ++++G    +A+A +CF+A
Sbjct: 636 ALLSERGKDHQPTLPVARSLLSDALRIDPTNRKAWYYLGMVHKSDG---RIADATDCFQA 695

Query: 745 ATFLEETAPVEPF 755
           A+ LEE+ P+E F
Sbjct: 696 ASMLEESDPIESF 700

[Close]

BLAST of CmaCh02G017320 vs. TAIR 10
Match: AT1G27460.1 (no pollen germination related 1 )

HSP 1 Score: 500.4 bits (1287), Expect = 2.6e-141
Identity = 294/718 (40.95%), Postives = 438/718 (61.00%), Query Frame = 0


Query: 44  MKCLCSGEKRAGDDMIPASELQSTLENSASEHSSRIGG--IVMKPEIGNIEEAESSLRES 103
           M C CSGE+   +D   + E  +T + SAS  SSR GG     K E   ++EAES+L+E+
Sbjct: 1   MLCACSGEQFRFEDQPGSPESLATRDFSASGLSSRNGGGDWDSKLEDIQVDEAESTLKEA 60

Query: 104 GCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMISIARTGHRARRRSQRFS 163
             LNYEEARALLGR EYQ+GN +AAL VF+GIDI  +T +I+ +I       + RS+   
Sbjct: 61  LSLNYEEARALLGRLEYQRGNFDAALQVFKGIDIKVLTPRIIKAIVEKTLPCKPRSKAVI 120

Query: 164 DPP--MSMHAVSLLLEAIFLKAKSLQGLGRFGEAAQSCKVILDILESSFPEGLPENFGAD 223
            PP  MSMH+VSLLLEAI LKA+SL+ LG + EAA+ CK+ILD++E++ P G+P+     
Sbjct: 121 VPPTTMSMHSVSLLLEAILLKARSLEELGSYKEAAEECKIILDVVENALPSGMPDGISGF 180

Query: 224 CKLQDTVTKAVELIPELWKQGDSSQEAILSYRRALLHQWNLDAGTTARIQKEFAIFLLYS 283
            KLQD   KA+EL+P LWK+  +  E I SYRRAL   WNLD    A  QK  A+ LLY 
Sbjct: 181 AKLQDIFQKALELLPLLWKKAGNHHETIASYRRALSRPWNLDPQRLAVTQKSLALVLLYG 240

Query: 284 GNEAYPPNLRSQMDSSFVPKNNNEEAILIFMILLRKVVLKRIDWDPSILDHLSFALTISG 343
             EA              PK+N EEAI++ M+L++K+V+  I WDP ++DHL++AL+++G
Sbjct: 241 SVEA-------------CPKDNIEEAIVLLMLLVKKMVVGDIQWDPELMDHLTYALSMTG 300

Query: 344 DTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRKLLGSHEDSK--SLPA 403
               LA  +E+  PG+  R +R++ L+LCY  AG D AA+NLL+  LG  E  +   +P 
Sbjct: 301 QFEVLANYLEQTLPGVYTRGERWYLLSLCYSAAGIDKAAINLLKMALGPSESRQIPHIPL 360

Query: 404 LLMASKICGEHGDHAEEGTRYARRALQKLDAGCDQLIGVANCLLGVSLSVYSKSAVADSE 463
           LL  +K+C +   H+ +G  +A R L   ++  + L+  A+  LGV     ++S+  DSE
Sbjct: 361 LLFGAKLCSKDPKHSRDGINFAHRLLDLGNSQSEHLLSQAHKFLGVCYGNAARSSKLDSE 420

Query: 464 RSSRQSEAIEAL-EAARKKTRMTNANVLYHLSVEYADERKLDSALHFAKKCLKLEGGSNI 523
           R   Q +++ +L EAA++       +V+++LSVE A +R + +AL  A +   + GG + 
Sbjct: 421 RVFLQKKSLFSLNEAAKRGKADPELDVIFNLSVENAVQRNVQAALDGAVEYSSMVGGVST 480

Query: 524 RTWLLVARILSALKRFVDGENIINAALEQTGKWDQGELLRTKAKLLIAQDELKGAIGTYT 583
           + W  +A +LSA KR  D E+I++  +E+ G  ++ ELLR KA L +AQ++ K A+ T +
Sbjct: 481 KGWKHLAIVLSAEKRLKDAESILDFTMEEAGDIEKIELLRLKAVLQMAQEQPKKAMKTCS 540

Query: 584 QLLAVFQVQSKSFGLGDKKLHKSSRNCIRSLQLEVWHDLALVYIRLSQWHNAEACLSKSK 643
            LL + + Q KS         + S + ++  + E W DLA VY +L  W +AE CL K++
Sbjct: 541 SLLGLIRAQEKS---------EQSESLLQKFETEAWQDLASVYGKLGSWSDAETCLEKAR 600

Query: 644 AIHSHSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSSVVIRRLGHQSHP 703
           ++  +S    + TG+  EAK L++EAL +F  +L I+P HVPS+VS + V+ + G +S P
Sbjct: 601 SMCYYSPRGWNETGLCLEAKSLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLP 660

Query: 704 VVRSFLMDAVRLNQTNHAAWYNLGLFYRAEGTKSSLAEAVECFEAATFLEETAPVEPF 755
             +SFLM+A+RL+  NH AW  LG   + +G      +A E ++AA  LE +APV+ F
Sbjct: 661 TAKSFLMNALRLDPRNHDAWMKLGHVAKKQGLSQ---QAAEFYQAAYELELSAPVQSF 693

The following BLAST results are available for this feature:

BLAST of CmaCh02G017320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66GN3	3.1e-224	58.73	Protein NPGR2 OS=Arabidopsis thaliana OX=3702 GN=NPGR2 PE=1 SV=1	[more]
Q8GZN1	2.0e-162	46.66	Protein NPG1 OS=Arabidopsis thaliana OX=3702 GN=NPG1 PE=1 SV=1	[more]
Q9CB03	3.7e-140	40.95	Protein NPGR1 OS=Arabidopsis thaliana OX=3702 GN=NPGR1 PE=1 SV=1	[more]
E9Q6P5	7.4e-24	23.64	Tetratricopeptide repeat protein 7B OS=Mus musculus OX=10090 GN=Ttc7b PE=1 SV=1	[more]
Q9ULT0	1.3e-23	24.91	Tetratricopeptide repeat protein 7A OS=Homo sapiens OX=9606 GN=TTC7A PE=1 SV=3	[more]

BLAST of CmaCh02G017320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28600.1	2.2e-225	58.73	no pollen germination related 2	[more]
AT2G43040.1	1.4e-163	46.66	tetratricopeptide repeat (TPR)-containing protein	[more]
AT1G27460.1	2.6e-141	40.95	no pollen germination related 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 643..676 e-value: 0.14 score: 21.3 coord: 481..514 e-value: 19.0 score: 12.5 coord: 516..549 e-value: 240.0 score: 2.8 coord: 713..749 e-value: 36.0 score: 10.1 coord: 174..207 e-value: 150.0 score: 4.7 coord: 552..585 e-value: 310.0 score: 1.9 coord: 609..642 e-value: 15.0 score: 13.5
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 645..675 e-value: 4.8E-4 score: 20.1
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 643..676 score: 9.4994
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 82..596 e-value: 2.3E-16 score: 61.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 597..749 e-value: 1.9E-15 score: 59.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 360..583
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 553..727
IPR043376	Protein NPG1-like	PANTHER	PTHR44102	PROTEIN NPG1	coord: 34..755
None	No IPR available	PANTHER	PTHR44102:SF12	PROTEIN NPGR2	coord: 34..755

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G017320.1	CmaCh02G017320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding