
CmaCh02G017300 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAATAATAGCAGGTTTTTTGAACCTGTGTTGCTTCCTTGCACTCACCTGTTTTGCAAGTATGCTTCCCATTTCGTTGTTTTTCATTCATCTTTCTTATTTTTGCGATTTGCAAGTTCTAAATACGTTCTTGACTTTGTTGTAGGGGTTGCATGCCATTTGCTTCCCAGATTGGATCAGTGTGCCCTCTCTGAAAATCAGGATTTGTCGATCGAAGTAGATTTTCCACTAGTCTTAGGCTTCTTGTAATCTTTCGTAAGATTTCTGGTATTTGTTGTTTTTTCTTTTTTGAGCAGCGAGGTCTTGAATTATCCCTGATTCTTCATCCTTTATGATTACCCTGTTTCATCTCGACTTTTCTTCTGAATATCTGATTTATTTACAAACAGGGTCATATTCAATACTTGAACATCGCCTTTCTTGATTGATTAGATTACGGGTGATTGTTCGATTTTGTATATGTATATATATATCTCGAGGGATGTTCGTGATGCATTTGTCGTATGCTATATTATGCAGACATGAGGCCTGCTCCTTTCATGGACAAGATGGTGTCAATATGCAGGAGCCTTGATGCCACATTCTCTACATATATGTCTAAACTAGTCTCACCTGTCAACAATTCTAAAGAAAAGGAATGCTGGGAACAATTCTAAAGAAAAGGAAGATAACAAGTGCGAAAAATATCATAATTGTCACATAGTACATTAATATCACAATTTACATGTTTTAAAATTTGCTTCCTATTTGTAGTATGCTGGGAACAATTTACTTACCGAGAATAAAGAAAGACCAGTTGCAATTTTAAGTAAATTTTCAACACGTAGTCTTAGTTCTTACCTCATTTATGTCTTCTGCATCTCATGGTCTGAAGATCATCCATCTTTTAAACTGCCCTAAGTGTCTAATTAACTCCAGTAGACGCTGGGGCAGCTGTGGACGAATCATGTTTTGGTCAGTCTATGCGTTACTCTTCCAGCAACTGCAAGGGGTTTGAGGGGTGCAGCATGCCTCTTGATTGTGAATGTGAGAATCTTGACATTGAGGGTAAAAAGGGTAGTGGGAGGCATGAAGATTGTAGAATGCCACCTGTGAGTCAGGCAAACCAGTTATCAGCCGGAAGCCCACCACACTTTGGTTCTGGCAAGGTATCAGATGACAGTAGTGAAGAGTACCGTGGTCGTGCAAGATTTGATATTCTCCCTATTTCCTCCTCCTCCCCTGTCTTTTTTCTGGTCATTTTCCCAGCTTTTGTTGCAAATGTAGGAAGTGCATGCTGGCTTCTAGCATCATTATAAGCTTCTAAACTATCTGTAGCTCTGAAGTGCCATCTTATTGTCGTATAGTGATAATTGCCTCTATATCATGTAGGTGCACAGAATTCTGTGTTGTACATATATTTCTGAATTTAGCAATTGGTAGTCTAGCCGAGAGGTGGTGTGATTGCCATACAATATCTTAGCGAAGGGTCTTTTCATCCATTTTCTGATAACTTGAAATTTGGAGTGTTTAGGGGTAAAAGCTTGCATGAAAGAAAGGCGTCCTTTGAACGAGGAAGCTTATGAAATTTCTCTTGACCACTATGGGTGCATTGATGGTCCCAAATCTGGCAGGCTGAGGGTTTTAAGCAATGTAAGTTGACTCATTGGATGCATGAAGAGTAATGGTATTAAAATCCTTACTGTCATTGTTACATTAGTAGAGTACAATTTTGTTGGTGGAGCGTGAGAGCATATATTTAAGGTTTCATTATGATTTCATTTATTGGTTAGGGTACTGTGGTCAATTGCATCTTCTGTTCCGTACTCGTCTGTGGTTCAATTGGTGATTTATGACCCGATTATTTCCCATTCCATTTCTACAGGCACCCAAGCTCTTCATTGGCTTGAGTTTCTATTTTACTGGTGATTTTCCATCGGCTTATGAGGAGGATCTTCAAGATTTGGTCAAAGCTGCGGGAGGTACCATATTAGAGAAGGACGAATTCCCAGCACCTAGTTGTAATGACCAGACTGCACCAAAGGTGCTGGTTGTATACAATCTCGATTCTCCTGGAGGATGCAAAGTGGGGGTGGAGGTTTTAATTCTCTGGCAAAGATTAAATGAGGCAGAGGGAATAGCTGCAAAGGTTGGAGCCCAAGTCATTGGTCATACATGGCTTGTGGAATCCATTGCAGCGGGTAACTTGCAACATTTTGTCAGCTGCTAA ATGCTAATAATAGCAGGTTTTTTGAACCTGTGTTGCTTCCTTGCACTCACCTGTTTTGCAAGGGTTGCATGCCATTTGCTTCCCAGATTGGATCAGTGTGCCCTCTCTGAAAATCAGGATTTGTCGATCGAATATGCTGGGAACAATTTACTTACCGAGAATAAAGAAAGACCAGTTGCAATTTTAATAGACGCTGGGGCAGCTGTGGACGAATCATGTTTTGGTCAGTCTATGCGTTACTCTTCCAGCAACTGCAAGGGGTTTGAGGGGTGCAGCATGCCTCTTGATTGTGAATGTGAGAATCTTGACATTGAGGGTAAAAAGGGTAGTGGGAGGCATGAAGATTGTAGAATGCCACCTGTGAGTCAGGCAAACCAGTTATCAGCCGGAAGCCCACCACACTTTGGTTCTGGCAAGGTATCAGATGACAGTAGTGAAGAGTACCGTGGTCGTGCAAGATTTGATATTCTCCCTATTTCCTCCTCCTCCCCTGTCTTTTTTCTGGTCATTTTCCCAGCTTTTGTTGCAAATGTAGGAAGGGTAAAAGCTTGCATGAAAGAAAGGCGTCCTTTGAACGAGGAAGCTTATGAAATTTCTCTTGACCACTATGGGTGCATTGATGGTCCCAAATCTGGCAGGCTGAGGGTTTTAAGCAATGCACCCAAGCTCTTCATTGGCTTGAGTTTCTATTTTACTGGTGATTTTCCATCGGCTTATGAGGAGGATCTTCAAGATTTGGTCAAAGCTGCGGGAGGTACCATATTAGAGAAGGACGAATTCCCAGCACCTAGTTGTAATGACCAGACTGCACCAAAGGTGCTGGTTGTATACAATCTCGATTCTCCTGGAGGATGCAAAGTGGGGGTGGAGGTTTTAATTCTCTGGCAAAGATTAAATGAGGCAGAGGGAATAGCTGCAAAGGTTGGAGCCCAAGTCATTGGTCATACATGGCTTGTGGAATCCATTGCAGCGGGTAACTTGCAACATTTTGTCAGCTGCTAA ATGCTAATAATAGCAGGTTTTTTGAACCTGTGTTGCTTCCTTGCACTCACCTGTTTTGCAAGGGTTGCATGCCATTTGCTTCCCAGATTGGATCAGTGTGCCCTCTCTGAAAATCAGGATTTGTCGATCGAATATGCTGGGAACAATTTACTTACCGAGAATAAAGAAAGACCAGTTGCAATTTTAATAGACGCTGGGGCAGCTGTGGACGAATCATGTTTTGGTCAGTCTATGCGTTACTCTTCCAGCAACTGCAAGGGGTTTGAGGGGTGCAGCATGCCTCTTGATTGTGAATGTGAGAATCTTGACATTGAGGGTAAAAAGGGTAGTGGGAGGCATGAAGATTGTAGAATGCCACCTGTGAGTCAGGCAAACCAGTTATCAGCCGGAAGCCCACCACACTTTGGTTCTGGCAAGGTATCAGATGACAGTAGTGAAGAGTACCGTGGTCGTGCAAGATTTGATATTCTCCCTATTTCCTCCTCCTCCCCTGTCTTTTTTCTGGTCATTTTCCCAGCTTTTGTTGCAAATGTAGGAAGGGTAAAAGCTTGCATGAAAGAAAGGCGTCCTTTGAACGAGGAAGCTTATGAAATTTCTCTTGACCACTATGGGTGCATTGATGGTCCCAAATCTGGCAGGCTGAGGGTTTTAAGCAATGCACCCAAGCTCTTCATTGGCTTGAGTTTCTATTTTACTGGTGATTTTCCATCGGCTTATGAGGAGGATCTTCAAGATTTGGTCAAAGCTGCGGGAGGTACCATATTAGAGAAGGACGAATTCCCAGCACCTAGTTGTAATGACCAGACTGCACCAAAGGTGCTGGTTGTATACAATCTCGATTCTCCTGGAGGATGCAAAGTGGGGGTGGAGGTTTTAATTCTCTGGCAAAGATTAAATGAGGCAGAGGGAATAGCTGCAAAGGTTGGAGCCCAAGTCATTGGTCATACATGGCTTGTGGAATCCATTGCAGCGGGTAACTTGCAACATTTTGTCAGCTGCTAA MLIIAGFLNLCCFLALTCFARVACHLLPRLDQCALSENQDLSIEYAGNNLLTENKERPVAILIDAGAAVDESCFGQSMRYSSSNCKGFEGCSMPLDCECENLDIEGKKGSGRHEDCRMPPVSQANQLSAGSPPHFGSGKVSDDSSEEYRGRARFDILPISSSSPVFFLVIFPAFVANVGRVKACMKERRPLNEEAYEISLDHYGCIDGPKSGRLRVLSNAPKLFIGLSFYFTGDFPSAYEEDLQDLVKAAGGTILEKDEFPAPSCNDQTAPKVLVVYNLDSPGGCKVGVEVLILWQRLNEAEGIAAKVGAQVIGHTWLVESIAAGNLQHFVSC Homology
BLAST of CmaCh02G017300 vs. ExPASy Swiss-Prot
Match: F4I443 (BRCA1-associated RING domain protein 1 OS=Arabidopsis thaliana OX=3702 GN=BARD1 PE=1 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 6.5e-41 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of CmaCh02G017300 vs. ExPASy Swiss-Prot
Match: Q8RXD4 (Protein BREAST CANCER SUSCEPTIBILITY 1 homolog OS=Arabidopsis thaliana OX=3702 GN=BRCA1 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.8e-23 Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 0
BLAST of CmaCh02G017300 vs. ExPASy Swiss-Prot
Match: Q9QZH2 (BRCA1-associated RING domain protein 1 OS=Rattus norvegicus OX=10116 GN=Bard1 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 8.1e-07 Identity = 42/147 (28.57%), Postives = 61/147 (41.50%), Query Frame = 0
BLAST of CmaCh02G017300 vs. ExPASy Swiss-Prot
Match: O70445 (BRCA1-associated RING domain protein 1 OS=Mus musculus OX=10090 GN=Bard1 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.0e-06 Identity = 41/147 (27.89%), Postives = 60/147 (40.82%), Query Frame = 0
BLAST of CmaCh02G017300 vs. ExPASy Swiss-Prot
Match: Q99728 (BRCA1-associated RING domain protein 1 OS=Homo sapiens OX=9606 GN=BARD1 PE=1 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 6.8e-06 Identity = 31/81 (38.27%), Postives = 40/81 (49.38%), Query Frame = 0
BLAST of CmaCh02G017300 vs. TAIR 10
Match: AT1G04020.2 (breast cancer associated RING 1 ) HSP 1 Score: 169.5 bits (428), Expect = 4.6e-42 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of CmaCh02G017300 vs. TAIR 10
Match: AT1G04020.1 (breast cancer associated RING 1 ) HSP 1 Score: 169.5 bits (428), Expect = 4.6e-42 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of CmaCh02G017300 vs. TAIR 10
Match: AT4G21070.1 (breast cancer susceptibility1 ) HSP 1 Score: 110.9 bits (276), Expect = 2.0e-24 Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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