CmaCh02G016630 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G016630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionGRAM domain-containing protein
LocationCma_Chr02: 9404793 .. 9407918 (+)
RNA-Seq ExpressionCmaCh02G016630
SyntenyCmaCh02G016630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTTCGCGGCTTCACTTCACTGGAAGCAGTGTAGGATGAACAGTGCTGAAGATTCTCCATTATCTTCATCTTTATGCCCTTCTGATTCTTCCTTCTCAGTTTGTAATTCTTATCTTCATAAAATGCGATCCCAAACCTCATCAAACGAAGTCTGTGTCGGGTTAGACTACGATCCTGATCGCTTGCTGAAGCCCTTAGAAACGACGCAATCTCTCCACCATGAGCAACCGACCCGAACGTGGGAAGGATAATCCCTATGTTCAATTCTCTGCTGCCTCATCGTCATCTGCTCAACCTGGGAAGCGTTCGTCTTCTTTAACTCTAATCCCTTCCGTTCTCTCTGTGATGATTTAGGGTTTTGATTTGTTCTTTTGAAATTTTGGATTATGTTCAGGTGATACGATGTGGGATGCGTTAGGTCGCTGCGGTAGGATGTTGGAAGATTATGGAAAAATGGCAGGGGAGGCTGTGGGAAACGTCTGGCATCACAGTTAGTTTTTTTCCTCGATCAAATTTTATTTTCTATCAAACTTCTGTTTTCAGTAAGAAAATTTGTTCCTTCATGCTGAAAATCTTAATATATTGTTCAATAATTTCCTTTGTATTTGCGTAGTTTCTCTGTTCTTCATCAAATTTGTTCCTTCATGCCGAAAATCCTTATATAATGTTCAATAATTTCCTTTGTATTTGCATAGGATTTATTTTAGCTTCCGATGAACGGATTCTAATAGTGAAACAGTTCCTGCTCGATCAGGTTTCTTCTTGTGAACTTAGGTGATACCCAAGTCACGTTGATGAACTTACATGTATGTATCTAATAGGTCTATCGTTAAAAAGTATCTAATAACTTGTTAAACGTTTATGTTTGTGTGTAATAGATTCCCCAATTTCAAGAACTATGTACATGGTTTTTAAACTTTCAATTTCGTGTTTAATAAGTCTTAAAACTTGTAACTTTGTGTCTAACTTTTAAATTTTGGCTACATATTCACCCTTATTTAAATTTGACAAACCTATTATACATAAAATTAGATGTTTTTGTCTAATAAAACATTAAACTTTTGATTTTCTGTCCAATAGGGTTGTGAACTCCAAAAAAAAATGTTGAATAAGCTAAGAACTAATTAGACACAAAATTGAAGGCGTAAGGACTTCCTAGACGCTTTTTAAAGGAGTTTGACACAAATCGGTAATATCACCATTTGGGTGGCATCTAATAGAACTGAGAAAGAACATGTACGAATGAGCCAATTTTGTTTTGGTAGGGCCGCTAGTGTTCTTTCTATATTGCTTGCTTCCTTGCCTTGAGTGTTGAATCTTTCTTTTATTGCGCTTAGATGCATGCCAAGATTTATTAGCTCCTAATGCAAATATGTTTTGACAGTAAAAGTTAGTCCAAGCATTGCAGATGCTGCAAAGGCCCGGTTTGTCCAAGGGACAAAATTACTTGCCGAAGGAGGACCTGAAGGAGTATTCCAGAGTACGTTTGGTGTTCTTCCTGGAGAGAAATACTTGCACTCGTATGCTTGCTATCTGTATGCCCCCTCTGGCCCTGTGAATGGGACTCTTTACATATCCACAAAAAGACTGGCTTTCTGTAGTGAATCCCCTGTCGGTAACTCTCCATCTCCTGGCCGGCCACAGAGTGCCTACTACAAGGTATGGTTGACCCATTTATTGGGGACGCTTTAGTTGTGATATAACTAAAAATGAAGTATTTCTCAAATTTATATCAAAGTTTAGTTACTTCTTCGCATTTTCAGCATGGATTTGAGTGGATTACTATAAAGCTTCTTGCATAATAAGCATTAAAATGTGTTCTTGACTGTTCTCTTTTTTGACACGAGTACAATTGGGATATATGTCAAATTCTGGATAAAAACATGAAATCTACCGGCCTCAGATGTTAAGATGAATTTTAACCATATGAAATCTACTCGGACTACATGCGGGACAAATCCCATTAAAAATAGATGGTGTGAGTTTGTCAAATGTTCGACAAAGAGACTGCCATTTGGGGCCTATAGATTCCATATCCACTCGAGGACAGAATAGCATAACTTAGTGACTAGGAGTGTAGGGAGAGCCTGTTGTGCCTTGTTTTTGTTTGACCGGCCTATCCTCTTTCGAGAAGCAAGCTCCTTCTGGTTGTCCAGTCCTTGGACAGCTCTCGGTTTTTGAGCATGTTGGGAGATTAGGTGACAGTTTCAAGACTCGAAAGCTTGACGAACAAGCAAATCAAGCCCTAACTATTTCTTTGAGTAAAGGTTTTTTTCCTTTACTAGTCAAGTGGTAAGGTAGGACGTATCTTAGGCCATTTTCCCCTTACAATGATTCTCGGTTTTCTACTGAAGTCAATGGTATGCCTAAACTATGGGATCACGAGTCCTAGTTGGTTAGAAGCTTGCCTGATATTTTTGGCCAACCCCCAGTCCACCTCCACAATACCTGGCTAAAGGTAATACAATAATCATATATCATCCAAGTAAAAGAAGATAGTAAACTGCTTTGAAGGAGTCTAGACTCGAAATTGGATTATTTTTTAGAAACCCTGACTTCTTGAAGTTGGCTTCAAATAGTTCTACCAGAAATTTCTTCGTAGTTCTTACTGAGTTCATGGTTTAAAAGATAATTACTAAGAGCATGCAAAATCGAAAGAAACAAAACTTAGCTGATAAATTGAAATGAAAATTTACCATAAGAAAAGGCGTTCTGAGCCCTGGATCTTGTTTAGCTACTCCAATTATGTTGCACAGATTAGAACTTGATTTGCATCTATTCCTCTTAGATATCTGAACAATGTTGACTTGAATTAATTGGAATGTTGGCAGAATGAATCTTTAGCTTAGCTATGGGATTTTCTGAGCACTTAACTATTTAGGATCTTCTGCAAATTTTTAGTTGAGCCATCTCTCAAGCATATTTATCAATTTGTAGGTGGTGATAGATCTGAATCGCCTGGCAACAGCCCACCCTTCTCCAAATCTTCTCAACCCCTCAGAAAAAGACATTCACATAGTCACAAAGGATGGGTATGAGTTCTGGTTCGTAGGATTTTTATCGTTCAGCAGTGCTCTGAAGAGTTTAAACGAGGCACTAATAAAGCACTCCCATGCCTAG

mRNA sequence

ATGGCGGCTTCGCGGCTTCACTTCACTGGAAGCAGTAAACGACGCAATCTCTCCACCATGAGCAACCGACCCGAACGTGGGAAGGATAATCCCTATGTTCAATTCTCTGCTGCCTCATCGTCATCTGCTCAACCTGGGAAGCGTGATACGATGTGGGATGCGTTAGGTCGCTGCGGTAGGATGTTGGAAGATTATGGAAAAATGGCAGGGGAGGCTGTGGGAAACGTCTGGCATCACATAAAAGTTAGTCCAAGCATTGCAGATGCTGCAAAGGCCCGGTTTGTCCAAGGGACAAAATTACTTGCCGAAGGAGGACCTGAAGGAGTATTCCAGAGTACGTTTGGTGTTCTTCCTGGAGAGAAATACTTGCACTCGTATGCTTGCTATCTGTATGCCCCCTCTGGCCCTGTGAATGGGACTCTTTACATATCCACAAAAAGACTGGCTTTCTGTAGTGAATCCCCTGTCGGTAACTCTCCATCTCCTGGCCGGCCACAGAGTGCCTACTACAAGGTGGTGATAGATCTGAATCGCCTGGCAACAGCCCACCCTTCTCCAAATCTTCTCAACCCCTCAGAAAAAGACATTCACATAGTCACAAAGGATGGGTATGAGTTCTGGTTCGTAGGATTTTTATCGTTCAGCAGTGCTCTGAAGAGTTTAAACGAGGCACTAATAAAGCACTCCCATGCCTAG

Coding sequence (CDS)

ATGGCGGCTTCGCGGCTTCACTTCACTGGAAGCAGTAAACGACGCAATCTCTCCACCATGAGCAACCGACCCGAACGTGGGAAGGATAATCCCTATGTTCAATTCTCTGCTGCCTCATCGTCATCTGCTCAACCTGGGAAGCGTGATACGATGTGGGATGCGTTAGGTCGCTGCGGTAGGATGTTGGAAGATTATGGAAAAATGGCAGGGGAGGCTGTGGGAAACGTCTGGCATCACATAAAAGTTAGTCCAAGCATTGCAGATGCTGCAAAGGCCCGGTTTGTCCAAGGGACAAAATTACTTGCCGAAGGAGGACCTGAAGGAGTATTCCAGAGTACGTTTGGTGTTCTTCCTGGAGAGAAATACTTGCACTCGTATGCTTGCTATCTGTATGCCCCCTCTGGCCCTGTGAATGGGACTCTTTACATATCCACAAAAAGACTGGCTTTCTGTAGTGAATCCCCTGTCGGTAACTCTCCATCTCCTGGCCGGCCACAGAGTGCCTACTACAAGGTGGTGATAGATCTGAATCGCCTGGCAACAGCCCACCCTTCTCCAAATCTTCTCAACCCCTCAGAAAAAGACATTCACATAGTCACAAAGGATGGGTATGAGTTCTGGTTCGTAGGATTTTTATCGTTCAGCAGTGCTCTGAAGAGTTTAAACGAGGCACTAATAAAGCACTCCCATGCCTAG

Protein sequence

MAASRLHFTGSSKRRNLSTMSNRPERGKDNPYVQFSAASSSSAQPGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIADAAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRLAFCSESPVGNSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFWFVGFLSFSSALKSLNEALIKHSHA
Homology
BLAST of CmaCh02G016630 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48
Identity = 95/199 (47.74%), Postives = 136/199 (68.34%), Query Frame = 0

Query: 29  DNPYVQFSAASSSSAQPGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIAD 88
           DNPYV  ++ +S+S +  K D + + L RCG+ +ED  + A   VG +  H+K SPSI+D
Sbjct: 28  DNPYVHITSPTSASDKRSK-DKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISD 87

Query: 89  AAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRL 148
           AA AR  QGTK++ EGGPE VFQ  FGVL  EK L S+ CY+   SGPV G +YIS +R+
Sbjct: 88  AAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRI 147

Query: 149 AFCSESPVG-NSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFW 208
           AFCS+  +   S + G   +AYYKVV++  ++++   S N+L PSE+ +H+VT+DG+EFW
Sbjct: 148 AFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFW 207

Query: 209 FVGFLSFSSALKSLNEALI 227
           F+GF+S+  A   LN+AL+
Sbjct: 208 FMGFVSYIDAFNCLNKALL 225

BLAST of CmaCh02G016630 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.0e-45
Identity = 92/201 (45.77%), Postives = 129/201 (64.18%), Query Frame = 0

Query: 28  KDNPYVQFSAASSSSAQPGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIA 87
           + NPYV     S S A     D++ D LG+ G+M  D  K A +  GN W H+K  PS+A
Sbjct: 63  ESNPYV-----SPSPAPRNTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVA 122

Query: 88  DAAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKR 147
           DAA +R  QGTK+LAEGG E VF+ TF  LP EK L +YACYL   +GPV G +Y+ST +
Sbjct: 123 DAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHK 182

Query: 148 LAFCSESPVGNSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFW 207
           LAF S++P+       +   +YYKVV+  N+L   +PS + +N S+K I +++ D +EFW
Sbjct: 183 LAFSSDNPLSYKEGE-QTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFW 242

Query: 208 FVGFLSFSSALKSLNEALIKH 229
           F+GF+++ SA+KSL EA+  H
Sbjct: 243 FMGFVTYESAVKSLQEAVQSH 257

BLAST of CmaCh02G016630 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.4e-42
Identity = 83/197 (42.13%), Postives = 128/197 (64.97%), Query Frame = 0

Query: 30  NPYVQFSAASSSSAQ-PGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIAD 89
           NPY+  S A +S A      +T+   LGR G+ + +  K      GN W H++ +PS AD
Sbjct: 96  NPYIARSPAETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFAD 155

Query: 90  AAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRL 149
           AA  R  Q TK+ AEGG E +F+ TF   P E+ L+S+ACYL   +GPV G LYIS+ +L
Sbjct: 156 AAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKL 215

Query: 150 AFCSESPVGNSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFWF 209
           A+CS++P+ +  +  + + +YYKVVI L++L   +PS +++NP+EK I +++ D +EFWF
Sbjct: 216 AYCSDNPL-SYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWF 275

Query: 210 VGFLSFSSALKSLNEAL 226
           +GFL++  A+ SL ++L
Sbjct: 276 MGFLNYDGAVTSLQDSL 291

BLAST of CmaCh02G016630 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 7.3e-31
Identity = 74/199 (37.19%), Postives = 112/199 (56.28%), Query Frame = 0

Query: 28  KDNPYVQFSAASSSSAQ-PGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSI 87
           + NPYV  +   +S A      +++   LGR GR + +    A    GN W H       
Sbjct: 53  RSNPYVARAPTETSDASLKETMESVKGVLGRWGRRVGEAAMKAESLAGNTWQH------P 112

Query: 88  ADAAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTK 147
             AA  R  Q TK+LAEGG E +F+ TF  +P E+  +S+ACYL   +GPV G LY+ST 
Sbjct: 113 LRAAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTA 172

Query: 148 RLAFCSESPVGNSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEF 207
           +LA+CS++ +               VVI L++L + +PS + +NP+EK I +++ D +EF
Sbjct: 173 KLAYCSDTSL---------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEF 230

Query: 208 WFVGFLSFSSALKSLNEAL 226
           WF+GFL++  A+ SL + L
Sbjct: 233 WFMGFLNYEGAVTSLQDTL 230

BLAST of CmaCh02G016630 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-28
Identity = 64/191 (33.51%), Postives = 103/191 (53.93%), Query Frame = 0

Query: 31  PYVQFSAASSSSAQPGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIADAA 90
           PYV +S        P   + +   +G    M   + + A     N+WH++K  PS+++ A
Sbjct: 74  PYVIYSPVE----HPTTNNPLEPVIG----MFHTWSRKAETVARNLWHNLKTGPSMSETA 133

Query: 91  KARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRLAF 150
             +     K + +GG E +F+  FG  P E    ++ACYL   +GPV GT+Y+S  R+AF
Sbjct: 134 WGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAF 193

Query: 151 CSESPVGNSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFWFVG 210
           CS+ P+  +   G+   +YY+VV+ L  +AT +P      P EK I + T DG++FWF+G
Sbjct: 194 CSDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMG 253

Query: 211 FLSFSSALKSL 222
           F+++  A   L
Sbjct: 254 FVNYEKATHHL 256

BLAST of CmaCh02G016630 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein )

HSP 1 Score: 194.5 bits (493), Expect = 9.3e-50
Identity = 95/199 (47.74%), Postives = 136/199 (68.34%), Query Frame = 0

Query: 29  DNPYVQFSAASSSSAQPGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIAD 88
           DNPYV  ++ +S+S +  K D + + L RCG+ +ED  + A   VG +  H+K SPSI+D
Sbjct: 28  DNPYVHITSPTSASDKRSK-DKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISD 87

Query: 89  AAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRL 148
           AA AR  QGTK++ EGGPE VFQ  FGVL  EK L S+ CY+   SGPV G +YIS +R+
Sbjct: 88  AAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRI 147

Query: 149 AFCSESPVG-NSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFW 208
           AFCS+  +   S + G   +AYYKVV++  ++++   S N+L PSE+ +H+VT+DG+EFW
Sbjct: 148 AFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFW 207

Query: 209 FVGFLSFSSALKSLNEALI 227
           F+GF+S+  A   LN+AL+
Sbjct: 208 FMGFVSYIDAFNCLNKALL 225

BLAST of CmaCh02G016630 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein )

HSP 1 Score: 186.4 bits (472), Expect = 2.5e-47
Identity = 94/199 (47.24%), Postives = 134/199 (67.34%), Query Frame = 0

Query: 29  DNPYVQFSAASSSSAQPGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIAD 88
           DNPYV  ++ +S+S +  K D + + L RCG+ +ED  + A   VG     +K SPSI+D
Sbjct: 28  DNPYVHITSPTSASDKRSK-DKVLEVLNRCGKKVEDATRKAEALVG-----VKFSPSISD 87

Query: 89  AAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRL 148
           AA AR  QGTK++ EGGPE VFQ  FGVL  EK L S+ CY+   SGPV G +YIS +R+
Sbjct: 88  AAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRI 147

Query: 149 AFCSESPVG-NSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFW 208
           AFCS+  +   S + G   +AYYKVV++  ++++   S N+L PSE+ +H+VT+DG+EFW
Sbjct: 148 AFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFW 207

Query: 209 FVGFLSFSSALKSLNEALI 227
           F+GF+S+  A   LN+AL+
Sbjct: 208 FMGFVSYIDAFNCLNKALL 220

BLAST of CmaCh02G016630 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 )

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-46
Identity = 92/201 (45.77%), Postives = 129/201 (64.18%), Query Frame = 0

Query: 28  KDNPYVQFSAASSSSAQPGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIA 87
           + NPYV     S S A     D++ D LG+ G+M  D  K A +  GN W H+K  PS+A
Sbjct: 63  ESNPYV-----SPSPAPRNTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVA 122

Query: 88  DAAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKR 147
           DAA +R  QGTK+LAEGG E VF+ TF  LP EK L +YACYL   +GPV G +Y+ST +
Sbjct: 123 DAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHK 182

Query: 148 LAFCSESPVGNSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFW 207
           LAF S++P+       +   +YYKVV+  N+L   +PS + +N S+K I +++ D +EFW
Sbjct: 183 LAFSSDNPLSYKEGE-QTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFW 242

Query: 208 FVGFLSFSSALKSLNEALIKH 229
           F+GF+++ SA+KSL EA+  H
Sbjct: 243 FMGFVTYESAVKSLQEAVQSH 257

BLAST of CmaCh02G016630 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein )

HSP 1 Score: 172.6 bits (436), Expect = 3.8e-43
Identity = 83/197 (42.13%), Postives = 128/197 (64.97%), Query Frame = 0

Query: 30  NPYVQFSAASSSSAQ-PGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIAD 89
           NPY+  S A +S A      +T+   LGR G+ + +  K      GN W H++ +PS AD
Sbjct: 96  NPYIARSPAETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFAD 155

Query: 90  AAKARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRL 149
           AA  R  Q TK+ AEGG E +F+ TF   P E+ L+S+ACYL   +GPV G LYIS+ +L
Sbjct: 156 AAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKL 215

Query: 150 AFCSESPVGNSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFWF 209
           A+CS++P+ +  +  + + +YYKVVI L++L   +PS +++NP+EK I +++ D +EFWF
Sbjct: 216 AYCSDNPL-SYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWF 275

Query: 210 VGFLSFSSALKSLNEAL 226
           +GFL++  A+ SL ++L
Sbjct: 276 MGFLNYDGAVTSLQDSL 291

BLAST of CmaCh02G016630 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29
Identity = 64/191 (33.51%), Postives = 103/191 (53.93%), Query Frame = 0

Query: 31  PYVQFSAASSSSAQPGKRDTMWDALGRCGRMLEDYGKMAGEAVGNVWHHIKVSPSIADAA 90
           PYV +S        P   + +   +G    M   + + A     N+WH++K  PS+++ A
Sbjct: 74  PYVIYSPVE----HPTTNNPLEPVIG----MFHTWSRKAETVARNLWHNLKTGPSMSETA 133

Query: 91  KARFVQGTKLLAEGGPEGVFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRLAF 150
             +     K + +GG E +F+  FG  P E    ++ACYL   +GPV GT+Y+S  R+AF
Sbjct: 134 WGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAF 193

Query: 151 CSESPVGNSPSPGRPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFWFVG 210
           CS+ P+  +   G+   +YY+VV+ L  +AT +P      P EK I + T DG++FWF+G
Sbjct: 194 CSDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMG 253

Query: 211 FLSFSSALKSL 222
           F+++  A   L
Sbjct: 254 FVNYEKATHHL 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M1221.3e-4847.74GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1[more]
Q9SE964.0e-4545.77GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1[more]
Q8S8F85.4e-4242.13GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1[more]
Q9M0637.3e-3137.19Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV... [more]
Q9LYV62.0e-2833.51GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
AT4G01600.19.3e-5047.74GRAM domain family protein [more]
AT4G01600.22.5e-4747.24GRAM domain family protein [more]
AT1G28200.12.8e-4645.77FH interacting protein 1 [more]
AT2G22475.13.8e-4342.13GRAM domain family protein [more]
AT5G13200.11.4e-2933.51GRAM domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 108..186
e-value: 1.3E-11
score: 54.6
IPR004182GRAM domainPFAMPF02893GRAMcoord: 109..228
e-value: 3.0E-15
score: 56.1
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 107..227
e-value: 3.3E-17
score: 64.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR31969:SF9GEM-LIKE PROTEIN 2coord: 18..228
IPR037848GEM-like proteinPANTHERPTHR31969GEM-LIKE PROTEIN 2coord: 18..228

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G016630.1CmaCh02G016630.1mRNA