CmaCh02G014400 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G014400
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionAAA domain-containing protein
LocationCma_Chr02: 8285787 .. 8288786 (-)
RNA-Seq ExpressionCmaCh02G014400
SyntenyCmaCh02G014400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGTTGGAGAAGAAAGCTCCCGGTTTGGGTCCTTGCCTGCTACAACTTCTAGAAATTTGTCGTCATCGTCTTCGACGTTCTTTTCAGCACTCCCTTCGCCGTTCTTTTCTCCACGGTCATCGACATGTCGAAGGTCAGAAGCAACAAAGGCTGACATGGGATGTGAAAGCATGGACTTCAGAGTTGATCCGCTAAACTCAAGTGTGGTGGTGCCAGATTCTGAATCTTTGTTGAAAGCTAAATTTGCAGTTTCGGATTTGATTCGAAATCCAGAAACTTGTACTCCAGGTGATTGTCGGAAGCTCGATCAGGCTTCGTCGTCAACTGGTGTATCTGGAAGTACTCCTTATAGTAGAAGCCTTCCTCATGGAAATAACTATTTGAGGCCTAGAGAAATGTACAAAAAGCTTAGTAGAAGTAACTTTACTTCTTACACAGCCGATCCGATTTCGATTTCCTCGACTAGACTAAGGAGTTATGATGTTTTCATAGGTTTGCACGGTTCCAAGCCTTCATTGCTGCGGTTTGCTAATTGGCTTCAAGCAGAGATGGAGGTTCATGGGATGAGTTGCTTTGTGTCTGATAGAGCAAAATGTAGGAATTCTCGCAAGCATCGAGTCATTGAGAGGGCGATGGATGCATCCTCGTTTGGAGTTGTGATTCTAACAAAGAAGTCGTTCCAGAATCCTTACACCATCGAGGAGCTGCGGTTTTTTTCTGGTAAGAAGAACTTGGTTCCAATATTTTTTGACTTGAGTCCAGGAGATTGTCTTGCCAGAGACATTGTGGAGAAAAGGGGAGATTTGTGGGAAAAACATGGTGGTGACTTGTGGATTCTGTATGGAGGATTGGAGAAGGAATGGAAAGAAGCCATCAAAGGGCTTTGTCGGGTCGACGAGTGGAAATTCGAAGCTCAGAATGGTAACTGGAGGGATTGCATACTGAAAGCCGTTATGCTACTTGCAATGAGGTTGGGAAGGCGAAGCATTGTCGAGCGCTTGACGAAATGGAGGGAGAAGGTAGAGAAAGAAGAGTTCCCTTTCCCCCGAAACGAGAATTTCGTAGGCAGGAAGAAAGAATTATCAGAGCTAGAGTTCATACTTTTTGGCAATGTAGCTGGTGATTCCGAAAGAGATTACTTCGAACTTATAGCTCGACCGAGACGAAAGAATCTGACCCTTGGCTGCAGTAAAAGCAGCTCACTTGAAGAGAAACAGCACCAACAAGCAGTAGAAACACGAAACAAGAAGGGTAAAGAACCTATTGTGTGGAAGGAGTCTGAAAAAGAGATCGAAATGCAAAGCATTGAATTTCCTCAGCGGCATCGACGACTGAAGACAAAAAGTGGCGAAAGGTATGCCAAGAGAAAGAAAACAGCCAAAATTTTGTACGGAAAAGGTATAGCTTGTGTTTCGGGGGACTCGGGAATCGGTAAGACCGAGCTTCTTTTAGAATTCGCGTATCGACATCACCAAAAGTACAAGATGGTTTTATGGATTGGAGGTGAAAGCAGATATATCAGGCAGAATTATCTGAACTTAGGTTCCTTCCTAGAAGTTGATGTAGGATTTGGAAGTTTTTCAGCTAAAAGCAAGATCAAGAATTTTGAGGAGCAGGAAGAGGCAGCCATTTCAAGAATTCGTACAGAGCTGATGAGAAACGTTCCATTTTTGCTGATAATCGATAATTTAGAGTGCGAAAAGGATTGGTGGGATCACAAACTTGTGATGGATCTTCTCCCTCGTTTTGGTGGCGAGACGCATATCATAATATCCACTCGACTTCCTCGTGTAATGAATTTGGAACCGTTGAAACTGTCTTACTTGTCGGGGGCTGAAGCAATGTGTTTAATGCAAGGAAGCGTTCGAGACTACTCGATTGCAGAGATCGATGTTTTGAGAATGATCGAAGAGAAAGTTGGAAGGTTAACGTTAGGCCTTGCGATAATTGGTGCGATCTTATCCGAGCTTCCCATAACACCAACTAGATTGTTGGATACAACCAATAGAATGCCTGTCAAAGATCAATCATGGAGTGGTAGAGAAGCTCATGTTTTCCGACGCAATACGTTCCTTATGCAGCTTTTCGAAGTGTGTTTCTCCATTTTCGACCATGCCGAGGGGCCACGGAGCTTGGCAACTAGAATGGCTCTAGCGAGTGGTTGGTTCGGTCCTGCTGCTATTCCCATTTCGCAATTAGCCCTTGCAGCTCACAAGATACCCGAAAAGCGACAGCGAACGAGGTTATGGAAGAAGTTGTTACGTTCCATGGCTTGTGGTATTACTTCATCTTACATGAAAAAGTCAGAAGCGGAAGCAACTTCCATGCTGTTAAGGTTCAATATGGCAAGAAGCAGTGCCAAACAGGGATGCCTACATTTCAATGATCTCGTAAAGCTATATGCGCGCAAGAGAGGCGTGGACGGAGTTGCACAAGCAATGGTTCAAGCTGTCATGACGCGCCCCTCGATCATTCATCACTCCGAACATTTGTGGGCAGCTTGTTTCTTGCTCTTCGGGTTCGGTCGGGACCCTGTAGTCGTCGAACTCAAAGTCTCGGAGCTATTGTACGTCATAAAAGAAGTGGTCTTGCCGCTTGCCGTGAGGACATTTCTCACATTCTCCCAATGCACCACCGCGTTGGAACTTCTCCGGCTATGCACAAACGCATTAGAAGCTGCCGATCAAGCCTTCGTCACACCGGTCGAGAAGTGGTTCGATAAGTCGCTTTGCTGGAGGCCAGTTCAAACAACTGCACAGCTGAATCCTTATCTTTGGCAGGAGCTAGCTCTGTGCAGAGCAACATTATTAGAAACCCGAGCAAGGCTAATGCTAAGAGGGGGACAATTCGACATCGGGGACGATCTAATCCGAAAGGCCATCTTCATCAGAACTTCGATATCAGGCGAGGATCATCCAGATACAAAATCTGCTCGAGAAACTCTCGGTAAACTCAATAGGCTTATTGCTAATTTCCATATTCATTCTCCTCCATAG

mRNA sequence

ATGGACGTTGGAGAAGAAAGCTCCCGGTTTGGGTCCTTGCCTGCTACAACTTCTAGAAATTTGTCGTCATCGTCTTCGACGTTCTTTTCAGCACTCCCTTCGCCGTTCTTTTCTCCACGGTCATCGACATGTCGAAGGTCAGAAGCAACAAAGGCTGACATGGGATGTGAAAGCATGGACTTCAGAGTTGATCCGCTAAACTCAAGTGTGGTGGTGCCAGATTCTGAATCTTTGTTGAAAGCTAAATTTGCAGTTTCGGATTTGATTCGAAATCCAGAAACTTGTACTCCAGGTGATTGTCGGAAGCTCGATCAGGCTTCGTCGTCAACTGGTGTATCTGGAAGTACTCCTTATAGTAGAAGCCTTCCTCATGGAAATAACTATTTGAGGCCTAGAGAAATGTACAAAAAGCTTAGTAGAAGTAACTTTACTTCTTACACAGCCGATCCGATTTCGATTTCCTCGACTAGACTAAGGAGTTATGATGTTTTCATAGGTTTGCACGGTTCCAAGCCTTCATTGCTGCGGTTTGCTAATTGGCTTCAAGCAGAGATGGAGGTTCATGGGATGAGTTGCTTTGTGTCTGATAGAGCAAAATGTAGGAATTCTCGCAAGCATCGAGTCATTGAGAGGGCGATGGATGCATCCTCGTTTGGAGTTGTGATTCTAACAAAGAAGTCGTTCCAGAATCCTTACACCATCGAGGAGCTGCGGTTTTTTTCTGGTAAGAAGAACTTGGTTCCAATATTTTTTGACTTGAGTCCAGGAGATTGTCTTGCCAGAGACATTGTGGAGAAAAGGGGAGATTTGTGGGAAAAACATGGTGGTGACTTGTGGATTCTGTATGGAGGATTGGAGAAGGAATGGAAAGAAGCCATCAAAGGGCTTTGTCGGGTCGACGAGTGGAAATTCGAAGCTCAGAATGGTAACTGGAGGGATTGCATACTGAAAGCCGTTATGCTACTTGCAATGAGGTTGGGAAGGCGAAGCATTGTCGAGCGCTTGACGAAATGGAGGGAGAAGGTAGAGAAAGAAGAGTTCCCTTTCCCCCGAAACGAGAATTTCGTAGGCAGGAAGAAAGAATTATCAGAGCTAGAGTTCATACTTTTTGGCAATGTAGCTGGTGATTCCGAAAGAGATTACTTCGAACTTATAGCTCGACCGAGACGAAAGAATCTGACCCTTGGCTGCAGTAAAAGCAGCTCACTTGAAGAGAAACAGCACCAACAAGCAGTAGAAACACGAAACAAGAAGGGTAAAGAACCTATTGTGTGGAAGGAGTCTGAAAAAGAGATCGAAATGCAAAGCATTGAATTTCCTCAGCGGCATCGACGACTGAAGACAAAAAGTGGCGAAAGGTATGCCAAGAGAAAGAAAACAGCCAAAATTTTGTACGGAAAAGGTATAGCTTGTGTTTCGGGGGACTCGGGAATCGGTAAGACCGAGCTTCTTTTAGAATTCGCGTATCGACATCACCAAAAGTACAAGATGGTTTTATGGATTGGAGGTGAAAGCAGATATATCAGGCAGAATTATCTGAACTTAGGTTCCTTCCTAGAAGTTGATGTAGGATTTGGAAGTTTTTCAGCTAAAAGCAAGATCAAGAATTTTGAGGAGCAGGAAGAGGCAGCCATTTCAAGAATTCGTACAGAGCTGATGAGAAACGTTCCATTTTTGCTGATAATCGATAATTTAGAGTGCGAAAAGGATTGGTGGGATCACAAACTTGTGATGGATCTTCTCCCTCGTTTTGGTGGCGAGACGCATATCATAATATCCACTCGACTTCCTCGTGTAATGAATTTGGAACCGTTGAAACTGTCTTACTTGTCGGGGGCTGAAGCAATGTGTTTAATGCAAGGAAGCGTTCGAGACTACTCGATTGCAGAGATCGATGTTTTGAGAATGATCGAAGAGAAAGTTGGAAGGTTAACGTTAGGCCTTGCGATAATTGGTGCGATCTTATCCGAGCTTCCCATAACACCAACTAGATTGTTGGATACAACCAATAGAATGCCTGTCAAAGATCAATCATGGAGTGGTAGAGAAGCTCATGTTTTCCGACGCAATACGTTCCTTATGCAGCTTTTCGAAGTGTGTTTCTCCATTTTCGACCATGCCGAGGGGCCACGGAGCTTGGCAACTAGAATGGCTCTAGCGAGTGGTTGGTTCGGTCCTGCTGCTATTCCCATTTCGCAATTAGCCCTTGCAGCTCACAAGATACCCGAAAAGCGACAGCGAACGAGGTTATGGAAGAAGTTGTTACGTTCCATGGCTTGTGGTATTACTTCATCTTACATGAAAAAGTCAGAAGCGGAAGCAACTTCCATGCTGTTAAGGTTCAATATGGCAAGAAGCAGTGCCAAACAGGGATGCCTACATTTCAATGATCTCGTAAAGCTATATGCGCGCAAGAGAGGCGTGGACGGAGTTGCACAAGCAATGGTTCAAGCTGTCATGACGCGCCCCTCGATCATTCATCACTCCGAACATTTGTGGGCAGCTTGTTTCTTGCTCTTCGGGTTCGGTCGGGACCCTGTAGTCGTCGAACTCAAAGTCTCGGAGCTATTGTACGTCATAAAAGAAGTGGTCTTGCCGCTTGCCGTGAGGACATTTCTCACATTCTCCCAATGCACCACCGCGTTGGAACTTCTCCGGCTATGCACAAACGCATTAGAAGCTGCCGATCAAGCCTTCGTCACACCGGTCGAGAAGTGGTTCGATAAGTCGCTTTGCTGGAGGCCAGTTCAAACAACTGCACAGCTGAATCCTTATCTTTGGCAGGAGCTAGCTCTGTGCAGAGCAACATTATTAGAAACCCGAGCAAGGCTAATGCTAAGAGGGGGACAATTCGACATCGGGGACGATCTAATCCGAAAGGCCATCTTCATCAGAACTTCGATATCAGGCGAGGATCATCCAGATACAAAATCTGCTCGAGAAACTCTCGGTAAACTCAATAGGCTTATTGCTAATTTCCATATTCATTCTCCTCCATAG

Coding sequence (CDS)

ATGGACGTTGGAGAAGAAAGCTCCCGGTTTGGGTCCTTGCCTGCTACAACTTCTAGAAATTTGTCGTCATCGTCTTCGACGTTCTTTTCAGCACTCCCTTCGCCGTTCTTTTCTCCACGGTCATCGACATGTCGAAGGTCAGAAGCAACAAAGGCTGACATGGGATGTGAAAGCATGGACTTCAGAGTTGATCCGCTAAACTCAAGTGTGGTGGTGCCAGATTCTGAATCTTTGTTGAAAGCTAAATTTGCAGTTTCGGATTTGATTCGAAATCCAGAAACTTGTACTCCAGGTGATTGTCGGAAGCTCGATCAGGCTTCGTCGTCAACTGGTGTATCTGGAAGTACTCCTTATAGTAGAAGCCTTCCTCATGGAAATAACTATTTGAGGCCTAGAGAAATGTACAAAAAGCTTAGTAGAAGTAACTTTACTTCTTACACAGCCGATCCGATTTCGATTTCCTCGACTAGACTAAGGAGTTATGATGTTTTCATAGGTTTGCACGGTTCCAAGCCTTCATTGCTGCGGTTTGCTAATTGGCTTCAAGCAGAGATGGAGGTTCATGGGATGAGTTGCTTTGTGTCTGATAGAGCAAAATGTAGGAATTCTCGCAAGCATCGAGTCATTGAGAGGGCGATGGATGCATCCTCGTTTGGAGTTGTGATTCTAACAAAGAAGTCGTTCCAGAATCCTTACACCATCGAGGAGCTGCGGTTTTTTTCTGGTAAGAAGAACTTGGTTCCAATATTTTTTGACTTGAGTCCAGGAGATTGTCTTGCCAGAGACATTGTGGAGAAAAGGGGAGATTTGTGGGAAAAACATGGTGGTGACTTGTGGATTCTGTATGGAGGATTGGAGAAGGAATGGAAAGAAGCCATCAAAGGGCTTTGTCGGGTCGACGAGTGGAAATTCGAAGCTCAGAATGGTAACTGGAGGGATTGCATACTGAAAGCCGTTATGCTACTTGCAATGAGGTTGGGAAGGCGAAGCATTGTCGAGCGCTTGACGAAATGGAGGGAGAAGGTAGAGAAAGAAGAGTTCCCTTTCCCCCGAAACGAGAATTTCGTAGGCAGGAAGAAAGAATTATCAGAGCTAGAGTTCATACTTTTTGGCAATGTAGCTGGTGATTCCGAAAGAGATTACTTCGAACTTATAGCTCGACCGAGACGAAAGAATCTGACCCTTGGCTGCAGTAAAAGCAGCTCACTTGAAGAGAAACAGCACCAACAAGCAGTAGAAACACGAAACAAGAAGGGTAAAGAACCTATTGTGTGGAAGGAGTCTGAAAAAGAGATCGAAATGCAAAGCATTGAATTTCCTCAGCGGCATCGACGACTGAAGACAAAAAGTGGCGAAAGGTATGCCAAGAGAAAGAAAACAGCCAAAATTTTGTACGGAAAAGGTATAGCTTGTGTTTCGGGGGACTCGGGAATCGGTAAGACCGAGCTTCTTTTAGAATTCGCGTATCGACATCACCAAAAGTACAAGATGGTTTTATGGATTGGAGGTGAAAGCAGATATATCAGGCAGAATTATCTGAACTTAGGTTCCTTCCTAGAAGTTGATGTAGGATTTGGAAGTTTTTCAGCTAAAAGCAAGATCAAGAATTTTGAGGAGCAGGAAGAGGCAGCCATTTCAAGAATTCGTACAGAGCTGATGAGAAACGTTCCATTTTTGCTGATAATCGATAATTTAGAGTGCGAAAAGGATTGGTGGGATCACAAACTTGTGATGGATCTTCTCCCTCGTTTTGGTGGCGAGACGCATATCATAATATCCACTCGACTTCCTCGTGTAATGAATTTGGAACCGTTGAAACTGTCTTACTTGTCGGGGGCTGAAGCAATGTGTTTAATGCAAGGAAGCGTTCGAGACTACTCGATTGCAGAGATCGATGTTTTGAGAATGATCGAAGAGAAAGTTGGAAGGTTAACGTTAGGCCTTGCGATAATTGGTGCGATCTTATCCGAGCTTCCCATAACACCAACTAGATTGTTGGATACAACCAATAGAATGCCTGTCAAAGATCAATCATGGAGTGGTAGAGAAGCTCATGTTTTCCGACGCAATACGTTCCTTATGCAGCTTTTCGAAGTGTGTTTCTCCATTTTCGACCATGCCGAGGGGCCACGGAGCTTGGCAACTAGAATGGCTCTAGCGAGTGGTTGGTTCGGTCCTGCTGCTATTCCCATTTCGCAATTAGCCCTTGCAGCTCACAAGATACCCGAAAAGCGACAGCGAACGAGGTTATGGAAGAAGTTGTTACGTTCCATGGCTTGTGGTATTACTTCATCTTACATGAAAAAGTCAGAAGCGGAAGCAACTTCCATGCTGTTAAGGTTCAATATGGCAAGAAGCAGTGCCAAACAGGGATGCCTACATTTCAATGATCTCGTAAAGCTATATGCGCGCAAGAGAGGCGTGGACGGAGTTGCACAAGCAATGGTTCAAGCTGTCATGACGCGCCCCTCGATCATTCATCACTCCGAACATTTGTGGGCAGCTTGTTTCTTGCTCTTCGGGTTCGGTCGGGACCCTGTAGTCGTCGAACTCAAAGTCTCGGAGCTATTGTACGTCATAAAAGAAGTGGTCTTGCCGCTTGCCGTGAGGACATTTCTCACATTCTCCCAATGCACCACCGCGTTGGAACTTCTCCGGCTATGCACAAACGCATTAGAAGCTGCCGATCAAGCCTTCGTCACACCGGTCGAGAAGTGGTTCGATAAGTCGCTTTGCTGGAGGCCAGTTCAAACAACTGCACAGCTGAATCCTTATCTTTGGCAGGAGCTAGCTCTGTGCAGAGCAACATTATTAGAAACCCGAGCAAGGCTAATGCTAAGAGGGGGACAATTCGACATCGGGGACGATCTAATCCGAAAGGCCATCTTCATCAGAACTTCGATATCAGGCGAGGATCATCCAGATACAAAATCTGCTCGAGAAACTCTCGGTAAACTCAATAGGCTTATTGCTAATTTCCATATTCATTCTCCTCCATAG

Protein sequence

MDVGEESSRFGSLPATTSRNLSSSSSTFFSALPSPFFSPRSSTCRRSEATKADMGCESMDFRVDPLNSSVVVPDSESLLKAKFAVSDLIRNPETCTPGDCRKLDQASSSTGVSGSTPYSRSLPHGNNYLRPREMYKKLSRSNFTSYTADPISISSTRLRSYDVFIGLHGSKPSLLRFANWLQAEMEVHGMSCFVSDRAKCRNSRKHRVIERAMDASSFGVVILTKKSFQNPYTIEELRFFSGKKNLVPIFFDLSPGDCLARDIVEKRGDLWEKHGGDLWILYGGLEKEWKEAIKGLCRVDEWKFEAQNGNWRDCILKAVMLLAMRLGRRSIVERLTKWREKVEKEEFPFPRNENFVGRKKELSELEFILFGNVAGDSERDYFELIARPRRKNLTLGCSKSSSLEEKQHQQAVETRNKKGKEPIVWKESEKEIEMQSIEFPQRHRRLKTKSGERYAKRKKTAKILYGKGIACVSGDSGIGKTELLLEFAYRHHQKYKMVLWIGGESRYIRQNYLNLGSFLEVDVGFGSFSAKSKIKNFEEQEEAAISRIRTELMRNVPFLLIIDNLECEKDWWDHKLVMDLLPRFGGETHIIISTRLPRVMNLEPLKLSYLSGAEAMCLMQGSVRDYSIAEIDVLRMIEEKVGRLTLGLAIIGAILSELPITPTRLLDTTNRMPVKDQSWSGREAHVFRRNTFLMQLFEVCFSIFDHAEGPRSLATRMALASGWFGPAAIPISQLALAAHKIPEKRQRTRLWKKLLRSMACGITSSYMKKSEAEATSMLLRFNMARSSAKQGCLHFNDLVKLYARKRGVDGVAQAMVQAVMTRPSIIHHSEHLWAACFLLFGFGRDPVVVELKVSELLYVIKEVVLPLAVRTFLTFSQCTTALELLRLCTNALEAADQAFVTPVEKWFDKSLCWRPVQTTAQLNPYLWQELALCRATLLETRARLMLRGGQFDIGDDLIRKAIFIRTSISGEDHPDTKSARETLGKLNRLIANFHIHSPP
Homology
BLAST of CmaCh02G014400 vs. TAIR 10
Match: AT4G23440.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 1272.7 bits (3292), Expect = 0.0e+00
Identity = 658/1009 (65.21%), Postives = 795/1009 (78.79%), Query Frame = 0

Query: 1   MDVGEESSRFGSLPATTSRNLSSSSS-TFFSALPSPFFSPRSSTCRR--SEATKADMGCE 60
           MD   +SSRFG  P   +RN+SSSSS  FFSA  SPFFSPRS   ++  SE+T++D  C+
Sbjct: 1   MDSRGDSSRFGQYPTKPTRNMSSSSSAAFFSANQSPFFSPRSPKIQQELSESTRSDAQCD 60

Query: 61  SMDFRVDPLNSSVVVPDSESLLKAKFAVSDLIRNPETCTPGDCRKLDQAS--SSTGVSGS 120
           S     DPL+SS    + E                    P  C+ L+ A   +S+ +   
Sbjct: 61  SF----DPLSSSSGFQEPELAF--------------LTAPNQCQSLEAADRIASSSMISC 120

Query: 121 TPYSRSLPHGNNYLRPREMYKKLSRSNFTSYT-ADPISISSTRLRSYDVFIGLHGSKPSL 180
           TP        + Y R  E          +SYT    +S+S  RLR  DVFIGL+G KPSL
Sbjct: 121 TP--------SRYGRGHES---------SSYTQTSSVSVSYNRLRCCDVFIGLYGQKPSL 180

Query: 181 LRFANWLQAEMEVHGMSCFVSDRAKCRNSRKHRVIERAMDASSFGVVILTKKSFQNPYTI 240
           LRFA+WL+AE+E  GMSCF+SDR +CR+SRK R++ERAMD +SFGV+ILT+K+F+NPYTI
Sbjct: 181 LRFADWLRAELEFQGMSCFMSDRGRCRSSRKQRIVERAMDGASFGVIILTRKAFKNPYTI 240

Query: 241 EELRFFSGKKNLVPIFFDLSPGDCLARDIVEKRGDLWEKHGGDLWILYGGLEKEWKEAIK 300
           EELRFF+ KKNLVP+FFDLSPG+CL RDIVEKRGDLWEKHGG+LW+LYGG+EKEWKEA+ 
Sbjct: 241 EELRFFANKKNLVPVFFDLSPGECLVRDIVEKRGDLWEKHGGELWVLYGGIEKEWKEAVH 300

Query: 301 GLCRVDEWKFEAQNGNWRDCILKAVMLLAMRLGRRSIVERLTKWREKVEKEEFPFPRNEN 360
           GL RVD+WK EA  GNWRDC+ +AV LLAMRLGRRSIVERLTKWR+K EKEEFP+PRNE+
Sbjct: 301 GLSRVDDWKLEAHEGNWRDCVFRAVTLLAMRLGRRSIVERLTKWRDKAEKEEFPYPRNES 360

Query: 361 FVGRKKELSELEFILFGNVAGDSERDYFELIARP--RRKNLTLGCSKSSSLEEKQHQQAV 420
           FVGRKKELSELEF+LFG+VAGDSERDYFEL ARP  R+KN+TLG +KS S EE       
Sbjct: 361 FVGRKKELSELEFVLFGDVAGDSERDYFELKARPTRRKKNVTLGWNKSGSAEE------- 420

Query: 421 ETRNKKGKEPIVWKESEKEIEMQSIEFPQRHRRLKTKSGERYAKRKKTAKILYGKGIACV 480
             R KKGKE +VWKESEKEIEMQS E P R    + K G R  +RK++ K++YGKG+ACV
Sbjct: 421 --RRKKGKEKVVWKESEKEIEMQSTEMPSRS---QVKVG-RNTRRKRSMKVVYGKGVACV 480

Query: 481 SGDSGIGKTELLLEFAYRHHQKYKMVLWIGGESRYIRQNYLNLGSFLEVDVGFGSFSAKS 540
           SG+SGIGKTELLLEFAYRHHQ+YKMVLWIGGESRYIRQNYLNL  +LEVD+G  + S K+
Sbjct: 481 SGESGIGKTELLLEFAYRHHQRYKMVLWIGGESRYIRQNYLNLYQYLEVDIGIENSSDKT 540

Query: 541 KIKNFEEQEEAAISRIRTELMRNVPFLLIIDNLECEKDWWDHKLVMDLLPRFGGETHIII 600
           ++K+FEEQE+AA+S+IR ELMRN+PFL++IDNLE EKDWWD KLVMDLLPRFGG THI+I
Sbjct: 541 RMKSFEEQEDAAVSKIRKELMRNIPFLVVIDNLESEKDWWDSKLVMDLLPRFGGGTHILI 600

Query: 601 STRLPRVMNLEPLKLSYLSGAEAMCLMQGSVRDYSIAEIDVLRMIEEKVGRLTLGLAIIG 660
           STRL +VMN+EPLKLSYLSGAEAM LMQG+V+DY ++E+D LR IE+K+GRLTLGLA++G
Sbjct: 601 STRLSQVMNMEPLKLSYLSGAEAMSLMQGNVKDYPVSEMDALRTIEDKLGRLTLGLAVVG 660

Query: 661 AILSELPITPTRLLDTTNRMPVKDQSWSGREAHVFRRNTFLMQLFEVCFSIFDHAEGPRS 720
           AILSELPI P+RLLDT NRMP+++   SGRE ++ RRN FL+QLFEVCFSIFDHA+GPRS
Sbjct: 661 AILSELPINPSRLLDTINRMPLREMVCSGREGNLLRRNAFLLQLFEVCFSIFDHADGPRS 720

Query: 721 LATRMALASGWFGPAAIPISQLALAAHKIPEK-RQRTRLWKKLLRSMACGITSSYMKKSE 780
           LATRM +ASGW  PA +P S LALAAHK+PEK R   RLW++L R++ CG TSS  K+S 
Sbjct: 721 LATRMVVASGWLAPAPVPASLLALAAHKLPEKHRGPKRLWRRLRRAITCGFTSSNSKRSG 780

Query: 781 AEATSMLLRFNMAR-SSAKQGCLHFNDLVKLYARKRG-VDGVAQAMVQAVMTRPSIIHHS 840
           AEA SMLLRFN+AR SS K G +  ++LVKLYAR R  V+  A AMVQAV++R S +  +
Sbjct: 781 AEAASMLLRFNIARTSSIKLGFIQIHELVKLYARNRVLVNENAPAMVQAVISRGSTVETA 840

Query: 841 EHLWAACFLLFGFGRDPVVVELKVSELLYVIKEVVLPLAVRTFLTFSQCTTALELLRLCT 900
           E +WA CFLLFGF  +   ++LK++ELL ++K+V+LPLA+RTF++FS+CT ++ELLR+CT
Sbjct: 841 EQIWAVCFLLFGFSNESPTIQLKITELLILVKQVILPLAIRTFISFSRCTASVELLRVCT 900

Query: 901 NALEAADQAFVTPVEKWFDKSLCWRPVQTTAQLNPYLWQELALCRATLLETRARLMLRGG 960
           NALEAADQ  VTPVEKW DKSLCWRPVQT+AQLNP LW+ELAL RAT+LETRA+LMLRGG
Sbjct: 901 NALEAADQTLVTPVEKWLDKSLCWRPVQTSAQLNPILWEELALARATVLETRAKLMLRGG 960

Query: 961 QFDIGDDLIRKAIFIRTSISGEDHPDTKSARETLGKLNRLIANFH-IHS 998
           QF + DDLIRKAIFIRTSISGEDHP T SARETL KL RL++N H IH+
Sbjct: 961 QFGLADDLIRKAIFIRTSISGEDHPGTVSARETLSKLTRLLSNVHQIHN 961

BLAST of CmaCh02G014400 vs. TAIR 10
Match: AT5G56220.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 603.2 bits (1554), Expect = 3.8e-172
Identity = 374/1009 (37.07%), Postives = 579/1009 (57.38%), Query Frame = 0

Query: 2   DVGEESSRFGSLPATTSRNLSSSSSTFFSALPSPFFSPR----SSTCRRSEATKADMGCE 61
           +  + S    + P  +   +S  SS F SAL SP+ SPR    S T  +     +  G +
Sbjct: 38  NASDSSPSIKNSPFYSPSLVSPPSSAFVSALQSPYISPRATTPSITTHKPSPPLSYKGSQ 97

Query: 62  SMDFRVDPLNSSVVVPDSESLLKAKFAVSDLIRNPETCTPGDCRKLDQASSSTGVSGSTP 121
           S     D + SS   P S+     ++  SD         P D RKL  ++S T       
Sbjct: 98  S-----DDVPSSSYTPPSD-----QYEFSDE-------QPSD-RKLKLSASCTPDPAPPR 157

Query: 122 YSRSLPHGNNYLRPREMYKKLSRSNFTSYTADPISISSTRLRSYDVFIGLHGSKPSLLRF 181
            S S P       PR    K+S S+           ++T+LRS DVFIG HG  P+L+RF
Sbjct: 158 ISFSFP------VPRVSLAKVSVSS---------PATNTKLRSSDVFIGFHGQNPNLVRF 217

Query: 182 ANWLQAEMEVHGMSCFVSDRAKCRNSRKHRVIERAMDASSFGVVILTKKSFQNPYTIEEL 241
             WL++E+E+ G++CFV+DRAK  +++ H + +R + + ++G+V+++  S  N  ++EE+
Sbjct: 218 CKWLKSELELQGIACFVADRAKYSDTQSHEIADRVICSVTYGIVVVSCSSLLNYLSLEEV 277

Query: 242 RFFSGKKNLVPIFFDLSPGDCLARDIVEKRGDLWEKHGGDLWILYGGLEKEWKEAIKGLC 301
           RFF+ KKNL+PIF+   P + +                    +    ++KE KEAI GL 
Sbjct: 278 RFFAQKKNLIPIFYGTGPSEIMG------------------LLNCNAIDKECKEAIDGLI 337

Query: 302 RVDEWKFEAQNGNWRDCILKAVMLLAMRLGRRSIVERLTKWREKVEK-EEFPFPRNENFV 361
           +  E+K EA   NWR C+ K   +L  +LGR+S+ +     +E VE  +E PFPRN +F+
Sbjct: 338 KSHEFKLEANESNWRSCVGKTATILRAKLGRKSVAD-----KEIVEGIDELPFPRNRSFL 397

Query: 362 GRKKELSELEFILFGNVAGDSERDYFELIARPRRKNLTLGCSKSSSLEEKQHQQAVETRN 421
           GR+KE+ E+E  LFGN       +Y E    P  +    G S+  + EE      V TRN
Sbjct: 398 GREKEIIEMEMALFGN------GEYLE-STTPSTRGEASGQSEGLADEE---SDVVPTRN 457

Query: 422 KKGKEPIVWKESEKEIEMQSIEFPQRH---RRLKTKSGERYAKRKKTAKILYGKGIACVS 481
            K     + + S+   E  S     ++   R LKTK     +  K +  ++      CV+
Sbjct: 458 GKFISLELGRCSDSRSEAWSDPNGGKNSLKRLLKTKKCRNNSNCKSSTSVV------CVN 517

Query: 482 GDSGIGKTELLLEFAYRHHQKYKMVLWIGGESRYIRQNYLNLGSFLEVDVGFGSFSAKSK 541
           G  GIGKTEL LEFAYR+ Q+YKMVLW+GGE+RY RQN LNL   L +DV   +   + +
Sbjct: 518 GVPGIGKTELALEFAYRYSQRYKMVLWVGGEARYFRQNLLNLSFSLGLDVSADAEKDRGR 577

Query: 542 IKNFEEQEEAAISRIRTELMRNVPFLLIIDNLECEKDWWDHKLVMDLLPRFGGETHIIIS 601
           +++F+EQE  A  RI+ EL R++P+LLIIDNLE EKDWW+ K + DL+PR  G TH++I+
Sbjct: 578 LRSFDEQEFEAFKRIKRELFRDMPYLLIIDNLEIEKDWWEGKDLNDLIPRNTGGTHVLIT 637

Query: 602 TRLPRVMNLEPLKLSYLSGAEAMCLMQG-SVRDYSIAEIDVLRMIEEKVGRLTLGLAIIG 661
           TRLP+VM  + ++LS L  ++AM L++G   +DY + E++VL++ +EK+GRL+ GL ++G
Sbjct: 638 TRLPKVMTFDTVQLSILPSSDAMVLLRGRRKKDYPVEEVEVLKLFDEKLGRLSYGLWVVG 697

Query: 662 AILSELPITPTRLLDTTNRMPVKDQSWSG----REAHVFRRNTFLMQLFEVCFSIFDHAE 721
           ++LSEL I P+ L +  N++ ++++S S      +    + N F+ ++     ++ + AE
Sbjct: 698 SLLSELAILPSALFEAVNKVQIEERSASPFLNLNDEQYCKSNPFVAKVLAFSLAVLEQAE 757

Query: 722 GPRS-LATRMALASGWFGPAAIPISQLALAAHKIPEKRQRTRLWKKLLRSM-----ACGI 781
           G R+ L+ +M L   WF P  IP++ LA AA  +P    R   W K L         CG+
Sbjct: 758 GNRNLLSLKMLLVGAWFAPVPIPVNLLAAAAKNMPTGGNRFSKWNKCLSHTFAWCGGCGL 817

Query: 782 TSSYMKKSEAEATSMLLRFNMARSSAKQ-GC-LHFNDLVKLYARKRGVDGVAQAMVQAVM 841
                ++SE +A  +L+R  +AR + +Q GC + F+ + + +AR+R      +A VQ V 
Sbjct: 818 G----RRSEEDAAFLLVRLGLARLTNRQPGCWIQFHPITQTFARRRDYILAPKATVQGVR 877

Query: 842 TRPSIIHHSEHLWAACFLLFGFGRDPVVVELKVSELLYVIKEVVLPLAVRTFLTFSQCTT 901
              + + + +HLWA+ FL+FGF  +P +V+L+  +++  IK   LPLA+  F TFS+C +
Sbjct: 878 KIDNPLLNLDHLWASAFLVFGFKSEPPLVQLQAMDMVLYIKRTALPLAITAFTTFSRCNS 937

Query: 902 ALELLRLCTNALEAADQAFVTPVEKWFDKSLCWRPVQTTAQLNPYLWQELALCRATLLET 961
           ALELL++CTN LE  +++FV+ ++ W   SLCW+  +T  +++ Y+WQ++ L +A LLET
Sbjct: 938 ALELLKVCTNVLEEVEKSFVSQIQDWRQGSLCWKK-KTNKKVDEYVWQDVTLLKALLLET 969

Query: 962 RARLMLRGGQFDIGDDLIRKAIFIRTSISGEDHPDTKSARETLGKLNRL 990
           RA+L+LRGG FD G++L R  I IRT + G +H  T +A+ETL KL R+
Sbjct: 998 RAKLLLRGGHFDSGEELCRTCISIRTVMLGHNHDLTLAAQETLAKLVRM 969

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT4G23440.10.0e+0065.21Disease resistance protein (TIR-NBS class) [more]
AT5G56220.13.8e-17237.07P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 437..604
e-value: 1.0E-11
score: 46.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 467..663
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF13676TIR_2coord: 176..255
e-value: 4.1E-7
score: 30.6
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPROSITEPS50104TIRcoord: 159..278
score: 13.006461
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyGENE3D3.40.50.10140coord: 129..273
e-value: 1.3E-11
score: 46.1
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilySUPERFAMILY52200Toll/Interleukin receptor TIR domaincoord: 159..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..123
NoneNo IPR availablePANTHERPTHR32472DNA REPAIR PROTEIN RADAcoord: 1..994
NoneNo IPR availablePANTHERPTHR32472:SF11DISEASE RESISTANCE PROTEIN (TIR-NBS CLASS)coord: 1..994

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G014400.1CmaCh02G014400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000725 recombinational repair
biological_process GO:0007165 signal transduction
molecular_function GO:0003953 NAD+ nucleosidase activity