Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATGGATTTCGACTCTGTTTTTGACCTCCCTGTTAAGTTCACCGAGCATCGTAACCATGTTAAGCACTCTTCAATGCCGGAAATTACGCCGAGAGTTGTACGAATTTCCTTCACTGACGGTGACGCCACCGATTCCTCCAGTGATGATGAGAACGAAATGTTTGGTCGCCGCAGAGTGAAGAAGTTTGTGAATGAGATTACGATTGAGCCGTCTTGTTCTGGAGAAGGAAATGGAATCTGGGGTGTGAACAGATCGGCGAGAAATGGCCGGAGACGGTCGTCCGGGAAATGTGGGGTCTCGTCCAGGAGTCGTCGGTCGGTGAAGATGCCGGACGGGAAGAAGTTCCGCGGTGTGAGACAAAGACCGTGGGGAAAATGGGCTGCCGAAATCAGAGACCCACTGCGGCGCGTACGGGTGTGGCTGGGAACTTATGACACGGCAGAGGAAGCTGCCATGGTTTACGACAACGCCGCCATTCAACTCCGGGGTCCCGATGCACTGACCAATTTCACCACCCAATCGCCCAAAAAATGCTCCGCCTACGACTCCGGCGAAGAGTCGAACAACAACATTTGCTCTCCGACCTCAGTCCTCCGGTGTCCATCGCCTTCAAACGAAGAGGACCAATCTCAACTCCCCGGCGAGCCAGACAACTCGTCCGTATCGGAAAATTTCTCGTCGGAGTTCTCAGACTTCTCGAGCTACTCCGACACCTTCATTCCAGACGACATTTTCGCCTTCGAAACTTCGATTCCGACCTTGTTAGACGACGAGATTGGCCTACATCACCAAACTAATTTCTTCGGCGATGACAGTTTCTTCAACGGCGTGTTTCATAGTCCCATCGAAAAAACCGGGTTCGGGTTCGGGTTCGAGTACCCTACTCCCCCTACGGACGACTTCTTCCAAGACTTCAGCGACGTGTTCGGTTCGGATCCTCTCGTTGCCCTTTAA
mRNA sequence
ATGAATATGGATTTCGACTCTGTTTTTGACCTCCCTGTTAAGTTCACCGAGCATCGTAACCATGTTAAGCACTCTTCAATGCCGGAAATTACGCCGAGAGTTGTACGAATTTCCTTCACTGACGGTGACGCCACCGATTCCTCCAGTGATGATGAGAACGAAATGTTTGGTCGCCGCAGAGTGAAGAAGTTTGTGAATGAGATTACGATTGAGCCGTCTTGTTCTGGAGAAGGAAATGGAATCTGGGGTGTGAACAGATCGGCGAGAAATGGCCGGAGACGGTCGTCCGGGAAATGTGGGGTCTCGTCCAGGAGTCGTCGGTCGGTGAAGATGCCGGACGGGAAGAAGTTCCGCGGTGTGAGACAAAGACCGTGGGGAAAATGGGCTGCCGAAATCAGAGACCCACTGCGGCGCGTACGGGTGTGGCTGGGAACTTATGACACGGCAGAGGAAGCTGCCATGGTTTACGACAACGCCGCCATTCAACTCCGGGGTCCCGATGCACTGACCAATTTCACCACCCAATCGCCCAAAAAATGCTCCGCCTACGACTCCGGCGAAGAGTCGAACAACAACATTTGCTCTCCGACCTCAGTCCTCCGGTGTCCATCGCCTTCAAACGAAGAGGACCAATCTCAACTCCCCGGCGAGCCAGACAACTCGTCCGTATCGGAAAATTTCTCGTCGGAGTTCTCAGACTTCTCGAGCTACTCCGACACCTTCATTCCAGACGACATTTTCGCCTTCGAAACTTCGATTCCGACCTTGTTAGACGACGAGATTGGCCTACATCACCAAACTAATTTCTTCGGCGATGACAGTTTCTTCAACGGCGTGTTTCATAGTCCCATCGAAAAAACCGGGTTCGGGTTCGGGTTCGAGTACCCTACTCCCCCTACGGACGACTTCTTCCAAGACTTCAGCGACGTGTTCGGTTCGGATCCTCTCGTTGCCCTTTAA
Coding sequence (CDS)
ATGAATATGGATTTCGACTCTGTTTTTGACCTCCCTGTTAAGTTCACCGAGCATCGTAACCATGTTAAGCACTCTTCAATGCCGGAAATTACGCCGAGAGTTGTACGAATTTCCTTCACTGACGGTGACGCCACCGATTCCTCCAGTGATGATGAGAACGAAATGTTTGGTCGCCGCAGAGTGAAGAAGTTTGTGAATGAGATTACGATTGAGCCGTCTTGTTCTGGAGAAGGAAATGGAATCTGGGGTGTGAACAGATCGGCGAGAAATGGCCGGAGACGGTCGTCCGGGAAATGTGGGGTCTCGTCCAGGAGTCGTCGGTCGGTGAAGATGCCGGACGGGAAGAAGTTCCGCGGTGTGAGACAAAGACCGTGGGGAAAATGGGCTGCCGAAATCAGAGACCCACTGCGGCGCGTACGGGTGTGGCTGGGAACTTATGACACGGCAGAGGAAGCTGCCATGGTTTACGACAACGCCGCCATTCAACTCCGGGGTCCCGATGCACTGACCAATTTCACCACCCAATCGCCCAAAAAATGCTCCGCCTACGACTCCGGCGAAGAGTCGAACAACAACATTTGCTCTCCGACCTCAGTCCTCCGGTGTCCATCGCCTTCAAACGAAGAGGACCAATCTCAACTCCCCGGCGAGCCAGACAACTCGTCCGTATCGGAAAATTTCTCGTCGGAGTTCTCAGACTTCTCGAGCTACTCCGACACCTTCATTCCAGACGACATTTTCGCCTTCGAAACTTCGATTCCGACCTTGTTAGACGACGAGATTGGCCTACATCACCAAACTAATTTCTTCGGCGATGACAGTTTCTTCAACGGCGTGTTTCATAGTCCCATCGAAAAAACCGGGTTCGGGTTCGGGTTCGAGTACCCTACTCCCCCTACGGACGACTTCTTCCAAGACTTCAGCGACGTGTTCGGTTCGGATCCTCTCGTTGCCCTTTAA
Protein sequence
MNMDFDSVFDLPVKFTEHRNHVKHSSMPEITPRVVRISFTDGDATDSSSDDENEMFGRRRVKKFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSGKCGVSSRSRRSVKMPDGKKFRGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFTTQSPKKCSAYDSGEESNNNICSPTSVLRCPSPSNEEDQSQLPGEPDNSSVSENFSSEFSDFSSYSDTFIPDDIFAFETSIPTLLDDEIGLHHQTNFFGDDSFFNGVFHSPIEKTGFGFGFEYPTPPTDDFFQDFSDVFGSDPLVAL
Homology
BLAST of CmaCh02G014030 vs. ExPASy Swiss-Prot
Match:
Q9SUQ2 (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN=CRF2 PE=1 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 1.3e-49
Identity = 155/361 (42.94%), Postives = 198/361 (54.85%), Query Frame = 0
Query: 3 MDFDSVFDLP-VKFTEHRNHVKHSSMPEIT----PRVVRISFTDGDATDSSSDDENE--- 62
M+ + LP +KFTEH+ + + + E+T R++RIS TD DATDSSSDDE E
Sbjct: 1 MEAEKKMVLPRIKFTEHKTNTT-TIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQ 60
Query: 63 --MFGRRRVKKFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSGKCGVSSRSRRSVKMP 122
+ RRRVKKFVNE+ ++ G+ G S + +R + VS +
Sbjct: 61 RFVSKRRRVKKFVNEVYLDSGAVVTGS--CGQMESKKRQKRAVKSESTVSPVVSATTTTT 120
Query: 123 DGKKFRGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF 182
KKFRGVRQRPWGKWAAEIRDPL+RVR+WLGTY+TAEEAAMVYDNAAIQLRGPDALTNF
Sbjct: 121 GEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF 180
Query: 183 ----TTQSPKK----------------------CSAYDSGEESNNNICSPTSVLRCPSPS 242
TT + KK S+ S SN+ +CSP SVLR P
Sbjct: 181 SVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAV 240
Query: 243 NE-EDQSQLP-------GEPDNSSVSENFSSEFSDFSSYSDTFIPDDIFAFETSIPTLLD 302
+E S P EP ++VSE FSDFS + F DD+F F +S+ +
Sbjct: 241 DEFSGISSSPVAAVVVKEEPSMTTVSET----FSDFS--APLFSDDDVFDFRSSV---VP 300
Query: 303 DEIGLHHQTNFFGDDSFFNGVFHSPIEKTGFGFGFEYPTPPTDDFFQDFSDVFGSDPLVA 320
D +G + FG+D F + GF FG + +D FQD D+FGSDPL+A
Sbjct: 301 DYLG----GDLFGEDLFTADMCTD--MNFGFDFGSGLSSWHMEDHFQDIGDLFGSDPLLA 343
BLAST of CmaCh02G014030 vs. ExPASy Swiss-Prot
Match:
Q9SUE3 (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN=CRF4 PE=1 SV=2)
HSP 1 Score: 172.9 bits (437), Expect = 5.7e-42
Identity = 137/328 (41.77%), Postives = 173/328 (52.74%), Query Frame = 0
Query: 3 MDFDSVFDL-PVKFTEH----RNHVKHSSMPEIT-----PRVVRISFTDGDATDSSSDDE 62
M D DL PVK+TEH R + K SSM T R+VR+S TD DATDSSSD+E
Sbjct: 1 MMMDEFMDLRPVKYTEHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSDEE 60
Query: 63 NEMFGRRRVKKFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSGKCGVSSRSRRSVKMP 122
+F RRRVK+ +NEI +EPS S G+ V+ S R+R + S+ + SV
Sbjct: 61 EFLFPRRRVKRLINEIRVEPSSSSTGD----VSASPTKDRKRINVD---STVQKPSVSGQ 120
Query: 123 DGKKFRGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF 182
+ KK+RGVRQRPWGKWAAEIRDP +R R+WLGT+ TAEEAA+VYDNAAI+LRGPDALTNF
Sbjct: 121 NQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF 180
Query: 183 TTQ-SPKKCSAYDSGEESN------------NNICSPTSVLRCPSPSNEEDQSQLPGEPD 242
T Q P+ + ESN ++ SPTSVL + +EE L +P
Sbjct: 181 TVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVLNYQTYVSEEPIDSLI-KPV 240
Query: 243 NSSVSENFSSEFSDFSSYSDTFIPDDIFAFETSIPTLLDDEIGLHHQTNFFGDDSFFNGV 302
E S +T DD F + T LD N+F + +
Sbjct: 241 KQEFLEPEQEPISWHLGEGNTNTNDDSFPLDI---TFLD---------NYFNESLPDISI 298
Query: 303 FHSPIEKTGFGFGFEYPTPPTD-DFFQD 307
F P+ P PT+ DFF D
Sbjct: 301 FDQPMS----------PIQPTENDFFND 298
BLAST of CmaCh02G014030 vs. ExPASy Swiss-Prot
Match:
O82503 (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN=CRF1 PE=1 SV=1)
HSP 1 Score: 160.2 bits (404), Expect = 3.8e-38
Identity = 124/310 (40.00%), Postives = 159/310 (51.29%), Query Frame = 0
Query: 32 PRVVRISFTDGDATDSSSDDENEM------FGRRRVKKFVNEITIEPSCSGEGNGIWGVN 91
PR++RIS TD ATDSSSD+E E+ RRRVKK+V E+ ++ S
Sbjct: 10 PRILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVS---------- 69
Query: 92 RSARNGRRRSSGKCGVSSRSRRSVKMP-----DGKKFRGVRQRPWGKWAAEIRDPLRRVR 151
K R +R V +P +KFRGVRQRPWGKWAAEIRDP RRVR
Sbjct: 70 ---------DKEKPMKKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVR 129
Query: 152 VWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF----TTQSPKKCSAYDSGEE-----SNN 211
VWLGT+DTAEEAA+VYDNAAIQLRGP+A NF T++ ++ S G
Sbjct: 130 VWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVTENVEEASTEVKGVSDFIIGGGE 189
Query: 212 NICSPTSVLRCP--SPSNEEDQSQLPGEPDNSSVSENFSSEFSDFSSYSDTFIPDDIFAF 271
+ SP SVL P S + + V + S SDFS + F DD+F F
Sbjct: 190 CLRSPVSVLESPFSGESTAVKEEFVGVSTAEIVVKKEPSFNGSDFS--APLFSDDDVFGF 249
Query: 272 ETSIPTLLDDEIGLHHQTNFFGDDSFFNGVFHSPIEKTGFGFGFEYPTPPTDDFFQDFSD 320
TS+ ++ N F D SF +G GFG G + + +D FQD D
Sbjct: 250 STSMSESFGGDL---FGDNLFADMSFGSGF--------GFGSGSGFSSWHVEDHFQDIGD 287
BLAST of CmaCh02G014030 vs. ExPASy Swiss-Prot
Match:
Q9FK12 (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN=CRF3 PE=1 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 2.5e-37
Identity = 140/356 (39.33%), Postives = 178/356 (50.00%), Query Frame = 0
Query: 12 PVKFTEHR----NHVKHSS---MPEITPRVVRISFTDGDATDSSSDDENE--MFGRRRVK 71
P+K+TEH+ + K SS + + V I +TD DATDSSSD++ E +F RRRVK
Sbjct: 9 PLKYTEHKTSMTKYTKKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDFLFPRRRVK 68
Query: 72 KFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSG--KCGVSSRSRRSVKMPDG---KKF 131
+FVNEIT+EPSC+ N + GV+ R SS + SSR R + K+ KKF
Sbjct: 69 RFVNEITVEPSCN---NVVTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKKF 128
Query: 132 RGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF----- 191
RGVRQRPWGKWAAEIRDP +R R+WLGT++TAEEAA+VYDNAAI+LRGPDALTNF
Sbjct: 129 RGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPPQ 188
Query: 192 -------------------TTQSPKKCSAYDSGEESNNNICSPTSVLRCPSPSNEEDQSQ 251
TT +P S+ +S EE ++ SPTSVL S ++ Q
Sbjct: 189 EEEEEEEPEPVIEEKPVIMTTPTPTTSSS-ESTEEDLQHLSSPTSVLNHRSEEIQQVQQP 248
Query: 252 LPGEPDNSSVSE--------NFSSEFSDFSSYSDTFIPDDIFAFETSIPTLLDDEIGLHH 311
VS N SD S DT D+ F ++ D +
Sbjct: 249 FKSAKPEPGVSNAPWWHTGFNTGLGESDDSFPLDTPFLDNYFNESPPEMSIFDQPM---- 308
Query: 312 QTNFFGDDSFFNGVFHSPIEKTGFGFGFEYPTPPTDDF---FQDFSDVFGSDPLVA 319
F +D FN + E E + D F DF D SD LVA
Sbjct: 309 DQIFCENDDIFNDMLFLGGET--MNIEDELTSSSIKDMGSTFSDFDDSLISDLLVA 354
BLAST of CmaCh02G014030 vs. ExPASy Swiss-Prot
Match:
Q9M374 (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana OX=3702 GN=CRF6 PE=1 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 6.9e-32
Identity = 105/247 (42.51%), Postives = 138/247 (55.87%), Query Frame = 0
Query: 13 VKFTEHRNHVKHSSMPEI-TPRVVRISFTDGDATDSSSDDE--NEMFGRRRVKKFVNEIT 72
VKFTE+R ++ P +PR+VRI+ TD ATDSSSDD+ N + RVK++V EI
Sbjct: 8 VKFTENRTVTNVAATPSNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEIR 67
Query: 73 IEPSCSGEGNGIWGVNRSARNGRRRSSGKCGVSSRSRRSVKMPDGKKFRGVRQRPWGKWA 132
C GE + + +AR G+ + V SVK KK+RGVRQRPWGK+A
Sbjct: 68 F---CQGESSS----STAARKGKHKEEESVVVEDDVSTSVK---PKKYRGVRQRPWGKFA 127
Query: 133 AEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFTTQSP-------KKCSA 192
AEIRDP R R+WLGT+ TAEEAA+ YD AAI L+GP ALTNF T + SA
Sbjct: 128 AEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSA 187
Query: 193 YDSGEESNNNICSPTSVLRCPSPSNEEDQSQLPG---EPDNSSVSENFSSEFSDFSSYSD 247
D G +S ++ SPTSVLR NEE + ++ P+ S E S + D
Sbjct: 188 CDYGRDSRQSLHSPTSVLR--FNVNEETEHEIEAIELSPERKSTVIKEEEESSAGLVFPD 242
BLAST of CmaCh02G014030 vs. TAIR 10
Match:
AT4G23750.1 (cytokinin response factor 2 )
HSP 1 Score: 198.4 bits (503), Expect = 8.9e-51
Identity = 155/361 (42.94%), Postives = 198/361 (54.85%), Query Frame = 0
Query: 3 MDFDSVFDLP-VKFTEHRNHVKHSSMPEIT----PRVVRISFTDGDATDSSSDDENE--- 62
M+ + LP +KFTEH+ + + + E+T R++RIS TD DATDSSSDDE E
Sbjct: 1 MEAEKKMVLPRIKFTEHKTNTT-TIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQ 60
Query: 63 --MFGRRRVKKFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSGKCGVSSRSRRSVKMP 122
+ RRRVKKFVNE+ ++ G+ G S + +R + VS +
Sbjct: 61 RFVSKRRRVKKFVNEVYLDSGAVVTGS--CGQMESKKRQKRAVKSESTVSPVVSATTTTT 120
Query: 123 DGKKFRGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF 182
KKFRGVRQRPWGKWAAEIRDPL+RVR+WLGTY+TAEEAAMVYDNAAIQLRGPDALTNF
Sbjct: 121 GEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF 180
Query: 183 ----TTQSPKK----------------------CSAYDSGEESNNNICSPTSVLRCPSPS 242
TT + KK S+ S SN+ +CSP SVLR P
Sbjct: 181 SVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAV 240
Query: 243 NE-EDQSQLP-------GEPDNSSVSENFSSEFSDFSSYSDTFIPDDIFAFETSIPTLLD 302
+E S P EP ++VSE FSDFS + F DD+F F +S+ +
Sbjct: 241 DEFSGISSSPVAAVVVKEEPSMTTVSET----FSDFS--APLFSDDDVFDFRSSV---VP 300
Query: 303 DEIGLHHQTNFFGDDSFFNGVFHSPIEKTGFGFGFEYPTPPTDDFFQDFSDVFGSDPLVA 320
D +G + FG+D F + GF FG + +D FQD D+FGSDPL+A
Sbjct: 301 DYLG----GDLFGEDLFTADMCTD--MNFGFDFGSGLSSWHMEDHFQDIGDLFGSDPLLA 343
BLAST of CmaCh02G014030 vs. TAIR 10
Match:
AT4G23750.2 (cytokinin response factor 2 )
HSP 1 Score: 198.4 bits (503), Expect = 8.9e-51
Identity = 155/361 (42.94%), Postives = 198/361 (54.85%), Query Frame = 0
Query: 3 MDFDSVFDLP-VKFTEHRNHVKHSSMPEIT----PRVVRISFTDGDATDSSSDDENE--- 62
M+ + LP +KFTEH+ + + + E+T R++RIS TD DATDSSSDDE E
Sbjct: 1 MEAEKKMVLPRIKFTEHKTNTT-TIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQ 60
Query: 63 --MFGRRRVKKFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSGKCGVSSRSRRSVKMP 122
+ RRRVKKFVNE+ ++ G+ G S + +R + VS +
Sbjct: 61 RFVSKRRRVKKFVNEVYLDSGAVVTGS--CGQMESKKRQKRAVKSESTVSPVVSATTTTT 120
Query: 123 DGKKFRGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF 182
KKFRGVRQRPWGKWAAEIRDPL+RVR+WLGTY+TAEEAAMVYDNAAIQLRGPDALTNF
Sbjct: 121 GEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF 180
Query: 183 ----TTQSPKK----------------------CSAYDSGEESNNNICSPTSVLRCPSPS 242
TT + KK S+ S SN+ +CSP SVLR P
Sbjct: 181 SVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAV 240
Query: 243 NE-EDQSQLP-------GEPDNSSVSENFSSEFSDFSSYSDTFIPDDIFAFETSIPTLLD 302
+E S P EP ++VSE FSDFS + F DD+F F +S+ +
Sbjct: 241 DEFSGISSSPVAAVVVKEEPSMTTVSET----FSDFS--APLFSDDDVFDFRSSV---VP 300
Query: 303 DEIGLHHQTNFFGDDSFFNGVFHSPIEKTGFGFGFEYPTPPTDDFFQDFSDVFGSDPLVA 320
D +G + FG+D F + GF FG + +D FQD D+FGSDPL+A
Sbjct: 301 DYLG----GDLFGEDLFTADMCTD--MNFGFDFGSGLSSWHMEDHFQDIGDLFGSDPLLA 343
BLAST of CmaCh02G014030 vs. TAIR 10
Match:
AT4G27950.1 (cytokinin response factor 4 )
HSP 1 Score: 172.9 bits (437), Expect = 4.0e-43
Identity = 137/328 (41.77%), Postives = 173/328 (52.74%), Query Frame = 0
Query: 3 MDFDSVFDL-PVKFTEH----RNHVKHSSMPEIT-----PRVVRISFTDGDATDSSSDDE 62
M D DL PVK+TEH R + K SSM T R+VR+S TD DATDSSSD+E
Sbjct: 1 MMMDEFMDLRPVKYTEHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSDEE 60
Query: 63 NEMFGRRRVKKFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSGKCGVSSRSRRSVKMP 122
+F RRRVK+ +NEI +EPS S G+ V+ S R+R + S+ + SV
Sbjct: 61 EFLFPRRRVKRLINEIRVEPSSSSTGD----VSASPTKDRKRINVD---STVQKPSVSGQ 120
Query: 123 DGKKFRGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF 182
+ KK+RGVRQRPWGKWAAEIRDP +R R+WLGT+ TAEEAA+VYDNAAI+LRGPDALTNF
Sbjct: 121 NQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF 180
Query: 183 TTQ-SPKKCSAYDSGEESN------------NNICSPTSVLRCPSPSNEEDQSQLPGEPD 242
T Q P+ + ESN ++ SPTSVL + +EE L +P
Sbjct: 181 TVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVLNYQTYVSEEPIDSLI-KPV 240
Query: 243 NSSVSENFSSEFSDFSSYSDTFIPDDIFAFETSIPTLLDDEIGLHHQTNFFGDDSFFNGV 302
E S +T DD F + T LD N+F + +
Sbjct: 241 KQEFLEPEQEPISWHLGEGNTNTNDDSFPLDI---TFLD---------NYFNESLPDISI 298
Query: 303 FHSPIEKTGFGFGFEYPTPPTD-DFFQD 307
F P+ P PT+ DFF D
Sbjct: 301 FDQPMS----------PIQPTENDFFND 298
BLAST of CmaCh02G014030 vs. TAIR 10
Match:
AT4G11140.1 (cytokinin response factor 1 )
HSP 1 Score: 160.2 bits (404), Expect = 2.7e-39
Identity = 124/310 (40.00%), Postives = 159/310 (51.29%), Query Frame = 0
Query: 32 PRVVRISFTDGDATDSSSDDENEM------FGRRRVKKFVNEITIEPSCSGEGNGIWGVN 91
PR++RIS TD ATDSSSD+E E+ RRRVKK+V E+ ++ S
Sbjct: 10 PRILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVS---------- 69
Query: 92 RSARNGRRRSSGKCGVSSRSRRSVKMP-----DGKKFRGVRQRPWGKWAAEIRDPLRRVR 151
K R +R V +P +KFRGVRQRPWGKWAAEIRDP RRVR
Sbjct: 70 ---------DKEKPMKKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVR 129
Query: 152 VWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF----TTQSPKKCSAYDSGEE-----SNN 211
VWLGT+DTAEEAA+VYDNAAIQLRGP+A NF T++ ++ S G
Sbjct: 130 VWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVTENVEEASTEVKGVSDFIIGGGE 189
Query: 212 NICSPTSVLRCP--SPSNEEDQSQLPGEPDNSSVSENFSSEFSDFSSYSDTFIPDDIFAF 271
+ SP SVL P S + + V + S SDFS + F DD+F F
Sbjct: 190 CLRSPVSVLESPFSGESTAVKEEFVGVSTAEIVVKKEPSFNGSDFS--APLFSDDDVFGF 249
Query: 272 ETSIPTLLDDEIGLHHQTNFFGDDSFFNGVFHSPIEKTGFGFGFEYPTPPTDDFFQDFSD 320
TS+ ++ N F D SF +G GFG G + + +D FQD D
Sbjct: 250 STSMSESFGGDL---FGDNLFADMSFGSGF--------GFGSGSGFSSWHVEDHFQDIGD 287
BLAST of CmaCh02G014030 vs. TAIR 10
Match:
AT5G53290.1 (cytokinin response factor 3 )
HSP 1 Score: 157.5 bits (397), Expect = 1.7e-38
Identity = 140/356 (39.33%), Postives = 178/356 (50.00%), Query Frame = 0
Query: 12 PVKFTEHR----NHVKHSS---MPEITPRVVRISFTDGDATDSSSDDENE--MFGRRRVK 71
P+K+TEH+ + K SS + + V I +TD DATDSSSD++ E +F RRRVK
Sbjct: 9 PLKYTEHKTSMTKYTKKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDFLFPRRRVK 68
Query: 72 KFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSG--KCGVSSRSRRSVKMPDG---KKF 131
+FVNEIT+EPSC+ N + GV+ R SS + SSR R + K+ KKF
Sbjct: 69 RFVNEITVEPSCN---NVVTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKKF 128
Query: 132 RGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF----- 191
RGVRQRPWGKWAAEIRDP +R R+WLGT++TAEEAA+VYDNAAI+LRGPDALTNF
Sbjct: 129 RGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPPQ 188
Query: 192 -------------------TTQSPKKCSAYDSGEESNNNICSPTSVLRCPSPSNEEDQSQ 251
TT +P S+ +S EE ++ SPTSVL S ++ Q
Sbjct: 189 EEEEEEEPEPVIEEKPVIMTTPTPTTSSS-ESTEEDLQHLSSPTSVLNHRSEEIQQVQQP 248
Query: 252 LPGEPDNSSVSE--------NFSSEFSDFSSYSDTFIPDDIFAFETSIPTLLDDEIGLHH 311
VS N SD S DT D+ F ++ D +
Sbjct: 249 FKSAKPEPGVSNAPWWHTGFNTGLGESDDSFPLDTPFLDNYFNESPPEMSIFDQPM---- 308
Query: 312 QTNFFGDDSFFNGVFHSPIEKTGFGFGFEYPTPPTDDF---FQDFSDVFGSDPLVA 319
F +D FN + E E + D F DF D SD LVA
Sbjct: 309 DQIFCENDDIFNDMLFLGGET--MNIEDELTSSSIKDMGSTFSDFDDSLISDLLVA 354
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SUQ2 | 1.3e-49 | 42.94 | Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q9SUE3 | 5.7e-42 | 41.77 | Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
O82503 | 3.8e-38 | 40.00 | Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q9FK12 | 2.5e-37 | 39.33 | Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q9M374 | 6.9e-32 | 42.51 | Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana OX=3702 GN... | [more] |