CmaCh02G012420 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGCTCTGGTCTGGGAGGCGGATTTCTGTCTGGAAATGGGGGGTTATTAGATCTGGAGTCTCCAATTCGAAGGCATCAACAGACCCAGTTGATCAATACCTCATTGACACACAGACATCACTTGAAGATGATGAATACTTTGGAAGGTGATCACCAGTCCGTTGGGATTATGGACACAAAAAGAATGGGACACAAAGATTTATCGATGACTTTCACTAAAGGGAAAGCTATTGCCTCTGGTGGCGTCACAAACAACAGTAACACGAGTGAAGAAGATGAGCCTAGTTTTACTGAGGATGGCGAGTGCACTGAATTTTTGAAGGGCAAAAAGGGCTCTCCTTGGCAGAGAATGAAGTGGACAGATGACATTGTGAGGCTTCTCATAGCAGTGGTTGCTTGTGTGGGTGATGACGGTGAGGCTGGAATGGGCTCGAAGAGAAAATCTGGTATTCTACAAAAGAAGGGAAAATGGAAAATGGTGTCGAAGATTATGATAAGTAAGGGGTGTCATGTTTCTCCCCAGCAGTGTGAGGACAAATTTAATGACTTAAACAAAAGATACAAGAGATTGAACGATATTCTTGGCAGGGGAACCAGTTGTAGAGTTGTGGAGAACCCTGCACTCATGGATTCAATGCCTCACCTCTCAAGCAAAGTCAAGGATGATGTAAGAAAAATATTAAGCTCAAAACACTTATTTTATAAGGAAATGTGTGCTTACCATAATGGACAAACAATTCCTGGTTGCCAGGATGTTGATTTCCAAGGTAAGATTTTGCCTGTTGTTAATTTCTCGGAAGGAAATAATGAGTCAGAAGAGGCTGATGACAGTGATAGTGACAGTGATGAATCAGATAATGAGGATGATCACTATCCCGAAGAAAATAGATTATGGCCGGCTCAATCTCGTGGCAGGGATAAAGCGAGTGCAGATGATGGTCCTCTTTGGTCAAATACTTCTGCACAAAATGAACTTGAAGGTCAAATTGATGTTTTTCTTTCGGATCCAACAAAGCCACAATGGGAGCGCAGAGATTGGATTAAAAAACAGATGCTACAACTTCAGGAGCAATGTGTAAGTTTCCAGGCTCAATCTTTTGAACTTGAGAAACAACGTTTCAAATGGTTAAGATATTGCAGTAAGAAGAGTAGGGATTTGGAGAGAATGAGGCTTGAAAATGAGAGGATGAAAATAGATAATGAGCGGAGAGTACTGCAACTGAAGCAGAAGGAAATGGAACTGGAATTTAAAAGGTCTGATTCATCCTTTGGGCCAACCCTTGGCATTGATAGAATTCAAGGGTGA ATGGATAGCTCTGGTCTGGGAGGCGGATTTCTGTCTGGAAATGGGGGGTTATTAGATCTGGAGTCTCCAATTCGAAGGCATCAACAGACCCAGTTGATCAATACCTCATTGACACACAGACATCACTTGAAGATGATGAATACTTTGGAAGGTGATCACCAGTCCGTTGGGATTATGGACACAAAAAGAATGGGACACAAAGATTTATCGATGACTTTCACTAAAGGGAAAGCTATTGCCTCTGGTGGCGTCACAAACAACAGTAACACGAGTGAAGAAGATGAGCCTAGTTTTACTGAGGATGGCGAGTGCACTGAATTTTTGAAGGGCAAAAAGGGCTCTCCTTGGCAGAGAATGAAGTGGACAGATGACATTGTGAGGCTTCTCATAGCAGTGGTTGCTTGTGTGGGTGATGACGGTGAGGCTGGAATGGGCTCGAAGAGAAAATCTGGTATTCTACAAAAGAAGGGAAAATGGAAAATGGTGTCGAAGATTATGATAAGTAAGGGGTGTCATGTTTCTCCCCAGCAGTGTGAGGACAAATTTAATGACTTAAACAAAAGATACAAGAGATTGAACGATATTCTTGGCAGGGGAACCAGTTGTAGAGTTGTGGAGAACCCTGCACTCATGGATTCAATGCCTCACCTCTCAAGCAAAGTCAAGGATGATGTAAGAAAAATATTAAGCTCAAAACACTTATTTTATAAGGAAATGTGTGCTTACCATAATGGACAAACAATTCCTGGTTGCCAGGATGTTGATTTCCAAGGTAAGATTTTGCCTGTTGTTAATTTCTCGGAAGGAAATAATGAGTCAGAAGAGGCTGATGACAGTGATAGTGACAGTGATGAATCAGATAATGAGGATGATCACTATCCCGAAGAAAATAGATTATGGCCGGCTCAATCTCGTGGCAGGGATAAAGCGAGTGCAGATGATGGTCCTCTTTGGTCAAATACTTCTGCACAAAATGAACTTGAAGGTCAAATTGATGTTTTTCTTTCGGATCCAACAAAGCCACAATGGGAGCGCAGAGATTGGATTAAAAAACAGATGCTACAACTTCAGGAGCAATGTGTAAGTTTCCAGGCTCAATCTTTTGAACTTGAGAAACAACGTTTCAAATGGTTAAGATATTGCAGTAAGAAGAGTAGGGATTTGGAGAGAATGAGGCTTGAAAATGAGAGGATGAAAATAGATAATGAGCGGAGAGTACTGCAACTGAAGCAGAAGGAAATGGAACTGGAATTTAAAAGGTCTGATTCATCCTTTGGGCCAACCCTTGGCATTGATAGAATTCAAGGGTGA ATGGATAGCTCTGGTCTGGGAGGCGGATTTCTGTCTGGAAATGGGGGGTTATTAGATCTGGAGTCTCCAATTCGAAGGCATCAACAGACCCAGTTGATCAATACCTCATTGACACACAGACATCACTTGAAGATGATGAATACTTTGGAAGGTGATCACCAGTCCGTTGGGATTATGGACACAAAAAGAATGGGACACAAAGATTTATCGATGACTTTCACTAAAGGGAAAGCTATTGCCTCTGGTGGCGTCACAAACAACAGTAACACGAGTGAAGAAGATGAGCCTAGTTTTACTGAGGATGGCGAGTGCACTGAATTTTTGAAGGGCAAAAAGGGCTCTCCTTGGCAGAGAATGAAGTGGACAGATGACATTGTGAGGCTTCTCATAGCAGTGGTTGCTTGTGTGGGTGATGACGGTGAGGCTGGAATGGGCTCGAAGAGAAAATCTGGTATTCTACAAAAGAAGGGAAAATGGAAAATGGTGTCGAAGATTATGATAAGTAAGGGGTGTCATGTTTCTCCCCAGCAGTGTGAGGACAAATTTAATGACTTAAACAAAAGATACAAGAGATTGAACGATATTCTTGGCAGGGGAACCAGTTGTAGAGTTGTGGAGAACCCTGCACTCATGGATTCAATGCCTCACCTCTCAAGCAAAGTCAAGGATGATGTAAGAAAAATATTAAGCTCAAAACACTTATTTTATAAGGAAATGTGTGCTTACCATAATGGACAAACAATTCCTGGTTGCCAGGATGTTGATTTCCAAGGTAAGATTTTGCCTGTTGTTAATTTCTCGGAAGGAAATAATGAGTCAGAAGAGGCTGATGACAGTGATAGTGACAGTGATGAATCAGATAATGAGGATGATCACTATCCCGAAGAAAATAGATTATGGCCGGCTCAATCTCGTGGCAGGGATAAAGCGAGTGCAGATGATGGTCCTCTTTGGTCAAATACTTCTGCACAAAATGAACTTGAAGGTCAAATTGATGTTTTTCTTTCGGATCCAACAAAGCCACAATGGGAGCGCAGAGATTGGATTAAAAAACAGATGCTACAACTTCAGGAGCAATGTGTAAGTTTCCAGGCTCAATCTTTTGAACTTGAGAAACAACGTTTCAAATGGTTAAGATATTGCAGTAAGAAGAGTAGGGATTTGGAGAGAATGAGGCTTGAAAATGAGAGGATGAAAATAGATAATGAGCGGAGAGTACTGCAACTGAAGCAGAAGGAAATGGAACTGGAATTTAAAAGGTCTGATTCATCCTTTGGGCCAACCCTTGGCATTGATAGAATTCAAGGGTGA MDSSGLGGGFLSGNGGLLDLESPIRRHQQTQLINTSLTHRHHLKMMNTLEGDHQSVGIMDTKRMGHKDLSMTFTKGKAIASGGVTNNSNTSEEDEPSFTEDGECTEFLKGKKGSPWQRMKWTDDIVRLLIAVVACVGDDGEAGMGSKRKSGILQKKGKWKMVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTSCRVVENPALMDSMPHLSSKVKDDVRKILSSKHLFYKEMCAYHNGQTIPGCQDVDFQGKILPVVNFSEGNNESEEADDSDSDSDESDNEDDHYPEENRLWPAQSRGRDKASADDGPLWSNTSAQNELEGQIDVFLSDPTKPQWERRDWIKKQMLQLQEQCVSFQAQSFELEKQRFKWLRYCSKKSRDLERMRLENERMKIDNERRVLQLKQKEMELEFKRSDSSFGPTLGIDRIQG Homology
BLAST of CmaCh02G012420 vs. TAIR 10
Match: AT1G21200.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 285.0 bits (728), Expect = 9.9e-77 Identity = 184/452 (40.71%), Postives = 266/452 (58.85%), Query Frame = 0
BLAST of CmaCh02G012420 vs. TAIR 10
Match: AT3G10040.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 243.0 bits (619), Expect = 4.3e-64 Identity = 151/387 (39.02%), Postives = 225/387 (58.14%), Query Frame = 0
BLAST of CmaCh02G012420 vs. TAIR 10
Match: AT1G76870.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). ) HSP 1 Score: 231.9 bits (590), Expect = 1.0e-60 Identity = 138/332 (41.57%), Postives = 206/332 (62.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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