CmaCh02G011590 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G011590
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr02: 6830174 .. 6837639 (+)
RNA-Seq Expression	CmaCh02G011590
Synteny	CmaCh02G011590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCCTTCTTTGTAACTGATTCTGTCTTCACGTTGTTCCGTTCTCGCTGTGCATCGAACTCGTGCTCCTCGCGAGCTCGCGCACGCTCATGAATTTCGCGGTCTAATTCAGCTCAGAAAGGGGGAAGAGGCTCAAAAGAGGAGAAGAATCAGAGAGAGAGAACGACAGAAAAGAGTGTAAAGCAAATTATCGAGTGGAGAGTGCGGTGGCCGGAGGTGGATACGAGGTTGGGACGGTTCACTGGTGGGTGGGTGGTTTTTCTTTCAAATGGTATATGATGCTTTGCAATTCATTGAGAGATCGAATTCGGCCATGGCTTCGTGATTATGACAGGCTTCAATCTTTCGCAGTTATTCTCATTTATATACAGGTGCATTCTTCCCCATATCTCCGCCTTCTTTTCTTTGTTCTTTGTTATTTACGTTTTTGAATTCTTAATCTAATTTATCTACATACGTATGAGAAAGATCGGGTGCGCATTGGTTGGATCCCTAGGGGCATTGTACAACGGTGTATTACTTGTAAATTTGGCGATCGCATTATTCGCTTTGGTAGCCATCGAGAGCAGCAGTCAGAGTCTTGGCCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTCCTGGTTCCTTCTTTTTGCCTACGACACATGGTCTCTCTCTAGCTCTCTCGTTTTAGTAATCTCAGCATGTTTAGTTTGTTTGAGAACGTGAGTCTGGACTGCTTGGTGAATTTAGCGATGTCTTGTCCCTGTCTATAGAGTAAAATTAGAAAGGATGCATACAGAACAAGTATGTGTTATAATATAATTCTACCACGCATATTGATATGACTAGTATGATAGCCAGCATGTTCCGTGTCCGCCCCTAAAAATGCATTTCCAACGTTGAAGCCGCTTATTATACTCCTACAGTTCTTTACTCTTTAACTAGTTGGATAATTTCATGATAAACCTTCCTCACCGGTCCATGGAAGCACTGCCGTATATGAAATAGATGAATCTAATTTGATGAATGCAGAAACTTCACACTCAAAGTTGAAATTCTAATTCCGGACGAAATATGATTTTGACTTAGCTATGATTAATTAAAAAGGATTTTGAAGGGAGCTTTGATGTTGTATAGTTGCAACAATATTTGAATGTTTTATACGTTTTGAAGAAAGCTTCGATCTTGTATAGCTGGAGAGGGTTTTTTATTATTTATTTATTATATATATTTTTTTTCTGTAAAAACTTATTTGAGCAATGCATTCTTCTGACACCCATCTTTGTGCCTGCATTTTCTTTTTTAATGCTCATCAAGTGCGTACGTGCATAACGTGCTTCTAGATTGATGCATGATGCTGATTGCTGGCTATTTTACCCTGTTAATTGAATGAAAGATTGCTTATATGCAGGAACATCTCATCTGAGAAATATGGACCCTTTTTTACCTTTTCAGTGAAGCTTACTCTGGCAATGCAGATTACTGGATTTTCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATTGGGGATTTCATACATGGAAACTCCAATCCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCTGCTACTCCAGTTGCAGTTAGAGAGCCCTCAGTTTCTGATGATATAATAGGGGGCTCTATCTATGATCCAACTTATTACTCGTCCCTCTTCGAAGATGGTCAAGATAGTAAATGTCTGTCTGGGGTAACGTATCAATTTATTTTAAGCACTCTTTCATGCAACCGTCATTGATCCATTGTCATTCATTTACTAGTTCTAAATTTTCTGCTGCGATCCTATTGCTTTATCCATTTAGTTTTCCATGGTATTCTTTTCATATGTAGTTAATATAATACCGAATTTCAGCATTCAATTCTTACAAGATGAAGAGGGTTAGCCTTATTACAAGTTTCCTTTACTGAATGAAGGTTTTTTTTGTTTATAAATACTTTTGAAGAGCAAATAAAATTTTATCACTATTACTATAATTATTTTTATTATCGTAGAAATCCACTTTATTAGGATGAATTGGAGCTAAACCGATTTCAAATGTCTTTAAAATTTGTATTGAATAGGTGACCTCTTCACAAAGTCTAATCTAAATCCTCGATGTTTGCTTATAAACCTAATACCATCGAGTAGGACCTTTGGATGAAGTAAATGGCGTCAATTCATCTCCATGAGTACTTAGCTATATTAGACCTAATAGTGGGAGTGAGATGAAAGATCAAGCGAATGAGAGAGAATGCTTACTAACAAACACTCTCCATGACCCGAGAGTCCTTGATGGTTTGTAATGTTCTAGTGGTAGATTACACAAAGTGCTCCCTTTCATCATTGATGACATGCAAATGGTTTTTACAGGAGACAGACATATCATGGATGCCATTTCTCTTGCAGCTGAATCATTAGATGATTACCTTAGCAATAATAATAAAGGCTTCATCCCCAAGATTTTTTCCCCTTTCGTTTGATAGGAGAGATCAATTTTGGAAAAGTATATGAGAAGTATATGAGAAGGTTGATGGATCCTTCACTTAGATATGATAATGGAGAGAAAAGGTTTCAGCCTTTAGATGGAGAAGGTGGATCTACGACTCTCTCCACTACAATGGGAGGACTATTCGAGATATAAGGCAGGAGGATTTTCTTTCCCCTTTTCCTCTCTACTCTGGTGGTCGATTCTTTGAGTTGGTTTGTTGAAGTTAGTAAAAAAAAAAAAAAAAAAGATAAGTTGGAAGGTTTTAAGACTGGAAATTAAAGTGATGAAATTGTGATAGTTTCAAATTGATGAAATTGTGGCTTTTTTTTTTGTTGAAGATCGTTGGCCCTCGAGCTTGAATATAAATATTCAAAATTCCTTTTTGACAATGTGAATGTGGACAAAAAGCGTCTTCCTTCACATGTACTAGTGGATCCAAGTGTAGATAACATTAGTAAAAAGTTGGCTGAATGAAAAGGCTTCCTAATATTGAAGGCATGAAGACTTACTACTGTTACTTGGTGCCTTCTGTTGTTCCTCTCTATTTCCTTAACATATTGTTAGATCCCATATTGGTTGGAGAGGGGAACGAGAAAGGTGTGGAAACCTCTCCCTAGCAGACATGTTTTAAAACCTTGAGGGGAAGCCCAAAAGAGAAAGTCCAAAGAAGACAATTTCTGTTAGCGGTGGGCTTAGACTGTTACAAATGTTATCAAAACCAAACACTGGGTGGTGTGCTAGCGAGGACGTTGGGCCCCCAAGGGGGATGTATTTTGAGATCCCATGTTAGTTGGAGAGGGGAATGAAACATTCCTTATTAGGGTGTGGAAACCTCCACCTAGTAAGCATGTTTTAAAACCTTGAGGGGAAGCTCATAAGGAAAAGCCTAAAGAGGACAATATTTGCTAGTGCTAGGCTTGTGCTGCTACATATACATCTGAGGTAAAGCCAGTATTTATTTAGAGAAAATTATTAGAGGCTGTCTTTAGTAAGGTGCAAAGAGTAATGGGGTGGTCATTTAGTCAGCACTCTTGGCCAAATGGCTACGAACCAGAGATATTCTGAGGATGATAAATGTTGTAGAAAACAATTATTAGAAGCAGGTATGATCAATACAGAGATGTTTGGTTCCCAAACCATTTGAAAGTGAAAGACCTTTGTTACCCATGAAAGGACATCTCCAAACTAGGAGTTTCTTGGAAGTTAACTCCCATTTTAAGTCTGTCCTGAGATAAGATTTTGGAAAGATAGTTGGCTGGGAAGTTAATTTCCATTTTAAGCCTAGAAACCACACCAAGTATTTTGGGAAGATAGTTGGCTATCCTTCTTCGCTTGGTGATACTTTTCCCTGATTATTCTTTTTAAACTACAAGTTTTTCTATATTTATAGCTATGGGTTGACCACTAACAAAACTTAGAATCCTTAGTTTAGAAGAGATATTGTGATAGAGAGGTGGAATAATGAACGAAATGGGGTTTCTTTGTTATGTTCCTTAATATTCATGACCACGATAAATTTAGCCAACCAAGTCGTTCACCTCGACCATTCTTTTTTTTTAATGAACACTTAGCATGTTGATATGGAAAAGAAACTATTTTTTTATGTGGTCCTTAGCCTGCAATAACCTTTATACCTTGGATAGAGTACAAAAAGAGATCCAAATTATGCCTTATTGCCCCATATACGTTTGATGTACGAGTCAAGCCAGCATCCAACGACCACCTCGTCCATCACTGTTATTTGCTTATAGAGGCTGAAGTTTCATTTTAATCCTTTTTTTTTTTTTTTACTTGCAGCTTCCCTAAGAAGATTGAATGTGGGCTAATTGAATTAATCTATGCTGGAGGTTAAAGGTCAAAGCTAGAGTTTAATGGTGTAATGCTTGAAGTGCTCAACTTTCTAAGCTCACCTTCTTTGATTTTGTGGGTCATGTATGCGACCTCTTTATATTGGGGTTGGAGCTGTTTCTTCAAGGAGTTTGGCTTGAGTATGGCTAGACATAAGTGCAGTGAGATGATTGAGAGGTTCCTTCTCCACCTTCCTTTCATGGTAGGGGAAGGTTGTTGTAGCTGAATGGGGTGTGTGTTGTTTTGTATGATCTTTGGGAAGAGAGGAATACCAAGGTCTTTAAAGTGCTTGAGAGAGAGGTTTTGGTGTGACGGTTGGGCTCTTAATAGGTTCAACGTCTCTTTGTGGGCTGCAATGGTTAAGCTGTTTTATAATTATCTGTTAGGTTTTGTTTTTGTTAGATTGGAGACCCTTTCTTTAGTTTGCCTCCTTTTGTGAGCTCTCTTTCTTGTATGCCCTTGTACTCTTTCATTTTTTTCTCCATGGAAATTTGGTTATTCATAAAAGAAGGTAAACGACCCCTATTTGGAGTGCCCTAACATATCTTTTTGTAATTGTCCCTCGTTCCTTGAGTGGAGGCCATTTTTTTTACTCCTTGTTAGGCTCAATGATGTGTGTCTAGGTTGTTGATTTTAATAGAATCATTTTTTTTTTTAGTAATAACTTTGTTTCCTATCCAAAAAGGGAGACTTGAGAGGCCATAGGTTAGAATCTATATATCTCGAGTGAAAAGGGAGTCTTTATATGTTGTCTACATCGGGGGAATAACAACTTTTAGGTCTTAATAATATACTAAGCATATATGAGGAAATAATATTTTTTATCAATAAAAATTTGATTTTTGTACTCCTCAAGCTGGATGATATATGCTAGTCATTTTGTTGAAGACCAACCCTACCATTGGTTCGATGTAGAGCCTTGTAAATGTTTGCAACTTGTTATTAGGAAGACACATCTCTCAAGTTGATTATGTTTATTTCAATTATCTCATTGATGAAGTGAATCTATTTCACCATGCTTCATTTGGTCATTATGTATTTCGATATGCTTAATTCACCATTTGTTGTCCGATAGGGAAATGACAGATGTTGTGGCTTTTTTGTCTTCGATTGGGTAGTTTTTGGTTAGCCTTGGGAGGGACGATTATCGTCTTTGGGGTCTTAGTCCTTCTGAAGGATTTTCTTGTAGTTCCTTTCTTTCATTGTCTGGTGAACCCTCTCCCGACCAGCTCCTCCATCTTTTCCTTGCTGTAGAAAGCCAAAATTTCCTAGAAGGTTCAATTTTTTGTGTAGTATGACTTTCTGAAAATGTTCATATCTTAGATCGTGTTTCAAGGAGGTTGATGGTGGTGTAAAAGAATTAAAATATTAGAGGATAATAGCATTTGTATGCTTTCTTGTTTGGTGAGTATTCTATAAGGTACATTTCATGGATTGGGTATCAAGTTTTGTATGGTGTTGAGGATAGAAATAAACAAAGGCAATACATTTTAGGCTACAATTGAGACATGAAAGTTTTTTACGGGTGTCTTGAACTTGAGGATGTAAAAGGACATTAGTTTTTGGAACAGTTTGCAGCTAGAACAACTTCACCTCACCCTGAAGGTGCGTTTTTTGCATTTTAACCACACTACTTTGTTGTGATGTGTCAACCCAAGAAATTTGTTGCGTAATGCCATGGGGTTAAAGATAGTATCCAAGAGTAGAGTTGAAGAGATCACAACTTTTATTTGTTCAATTACTTCTAAGTACTTTAATATTTGATTTGAAGCTGAATTAGGATCACTTTATGAAAGAATGAATTGTTAACTAGTTTCGATTTTTCTTTAAAATGTCCAACTCAAATGGGCGATAGTTAACTAATAAAAGAAACCAACATGTTCCGGTGGCATTTATTTACCCCTTTAAGGTCCCTCCAATATCTCCATGAATAAGAGAGAAAGGTTGAGATGGTCTATTAGAATGAGGTAAAAGATGAATGTGCGTGTGTTCGGAGAGTTGAAAGTTCTCACACTAAAAGAGTTTGCTATTTTATTAATTAACAAAGAAGGCTACATATACTTAAGGGAGAAAAAAAAAAAAAAAAATTATGGTTGCAACCTCTGAGGGGGGCCTCTTTTTTGCTCCGGATTGAGAAAAACATAGGCTCTTCAATTACAAAGTTAAATCTGTTGGAAAGGTTCACGGATCATGTTTTTGGTTGGTCTCTTTCAGTGTAAGTCCTATGCTCCATATAAATCGTAATGTTTCCCATCTTTCTGCCAATTGGAAGAGTTTGGTTTTCCTCCCCTTTCTGAAATTTCATGCGTCTCTCCTTGAAAAAAAAAGATGGGTTGTTTCTCCTACACTACGCATTTGAGGTTGCGCTACCCCCTGCATGTGCCTACACCTATATATTATTGAGCCTCATTCATGTCTTCTGTTTTTTCAATTGACTAACTAACCAATGATAGCATCATTTCTTGCTATTTCTATCTGTAGGTCTCCCATTTTGGTCATGGTGATAATGGTACTGCTTCTGGGTCAGATGTGTCTCGATCAAAGCTGCCCAGACATTTCCAAGTAGCCGACGTGAGTGTACTTATCTCAGATAATGGAATCTGTTAGTTATCAAGGCTTATAGAATTTAGTTCACTCTGCCTAACCAATGTTGTAAGATAAAAAAATTGTTATGTTTGGATATTTAACTGTGGATAGTAGCCGATGATGGAAGGTTCCCACCCCCCCCCNNCCCCCCCCCCATTTTAAAAGTAAACGAGAGAAACTGGATGAGTTTATTGATTCTTTAGGCTGAGATTTCTAGAAGGATGGATCAAACTTGACTGGTGATTAGGCTTTGATTCGTACCCATGATCTCAAATCCTGTCGCCCCACTTAATATCATGTAGTATGCTTATTCGTTGATTCTGGCGAAGAAGTAATCGAGTCTTCAGGCTGCGATATATAGAAGGATGGATCAACTTTCACTAGTGCTTTGTTCATTTTCATCACTGCCCCAGATTGTTTCTGTGCCTCCGCCCACCCCACATCCCACATGTTGATTTGATTCTAACTGGGTTAAGTCTTTGTAGGATGAGCATGCAGCTGGACATCAGCAACAGACGGTTTAG

mRNA sequence

TTATCCTTCTTTGTAACTGATTCTGTCTTCACGTTGTTCCGTTCTCGCTGTGCATCGAACTCGTGCTCCTCGCGAGCTCGCGCACGCTCATGAATTTCGCGGTCTAATTCAGCTCAGAAAGGGGGAAGAGGCTCAAAAGAGGAGAAGAATCAGAGAGAGAGAACGACAGAAAAGAGTGTAAAGCAAATTATCGAGTGGAGAGTGCGGTGGCCGGAGGTGGATACGAGGTTGGGACGGTTCACTGGTGGGTGGGTGGTTTTTCTTTCAAATGGTATATGATGCTTTGCAATTCATTGAGAGATCGAATTCGGCCATGGCTTCGTGATTATGACAGGCTTCAATCTTTCGCAGTTATTCTCATTTATATACAGATCGGGTGCGCATTGGTTGGATCCCTAGGGGCATTGTACAACGGTGTATTACTTGTAAATTTGGCGATCGCATTATTCGCTTTGGTAGCCATCGAGAGCAGCAGTCAGAGTCTTGGCCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTCCTGGTTCCTTCTTTTTGCCTACGACACATGGAACATCTCATCTGAGAAATATGGACCCTTTTTTACCTTTTCAGTGAAGCTTACTCTGGCAATGCAGATTACTGGATTTTCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATTGGGGATTTCATACATGGAAACTCCAATCCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCTGCTACTCCAGTTGCAGTTAGAGAGCCCTCAGTTTCTGATGATATAATAGGGGGCTCTATCTATGATCCAACTTATTACTCGTCCCTCTTCGAAGATGGTCAAGATAGTAAATGTCTGTCTGGGGTCTCCCATTTTGGTCATGGTGATAATGGTACTGCTTCTGGGTCAGATGTGTCTCGATCAAAGCTGCCCAGACATTTCCAAGTAGCCGACGATGAGCATGCAGCTGGACATCAGCAACAGACGGTTTAG

Coding sequence (CDS)

ATGATGCTTTGCAATTCATTGAGAGATCGAATTCGGCCATGGCTTCGTGATTATGACAGGCTTCAATCTTTCGCAGTTATTCTCATTTATATACAGATCGGGTGCGCATTGGTTGGATCCCTAGGGGCATTGTACAACGGTGTATTACTTGTAAATTTGGCGATCGCATTATTCGCTTTGGTAGCCATCGAGAGCAGCAGTCAGAGTCTTGGCCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTCCTGGTTCCTTCTTTTTGCCTACGACACATGGAACATCTCATCTGAGAAATATGGACCCTTTTTTACCTTTTCAGTGAAGCTTACTCTGGCAATGCAGATTACTGGATTTTCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATTGGGGATTTCATACATGGAAACTCCAATCCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCTGCTACTCCAGTTGCAGTTAGAGAGCCCTCAGTTTCTGATGATATAATAGGGGGCTCTATCTATGATCCAACTTATTACTCGTCCCTCTTCGAAGATGGTCAAGATAGTAAATGTCTGTCTGGGGTCTCCCATTTTGGTCATGGTGATAATGGTACTGCTTCTGGGTCAGATGTGTCTCGATCAAAGCTGCCCAGACATTTCCAAGTAGCCGACGATGAGCATGCAGCTGGACATCAGCAACAGACGGTTTAG

Protein sequence

MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALVAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQITGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGGSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAGHQQQTV

Homology

[Close]

BLAST of CmaCh02G011590 vs. TAIR 10
Match: AT1G55535.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 298.5 bits (763), Expect = 4.9e-81
Identity = 156/241 (64.73%), Postives = 189/241 (78.42%), Query Frame = 0


Query: 1   MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL 60
           MMLC SLRDRI PWLRDY +LQS AV LIY QIGCAL+GSLGALYNGVLL+NLAIALFAL
Sbjct: 1   MMLCGSLRDRIHPWLRDYVKLQSLAVFLIYAQIGCALIGSLGALYNGVLLINLAIALFAL 60

Query: 61  VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI 120
           VAIES+SQSLGRTYAVLLF A+ LDISWF+LF  + W+IS+E YG FF FSVKLT+AM++
Sbjct: 61  VAIESNSQSLGRTYAVLLFCALLLDISWFILFTEEIWSISAETYGTFFIFSVKLTMAMEM 120

Query: 121 TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG 180
            GF VRLSSSLLW QIYRLG + ++T +PRE D DLRNSFL+P TP   R+ S +++I+G
Sbjct: 121 IGFFVRLSSSLLWFQIYRLGAAIVDTSLPRETDSDLRNSFLNPPTPAIARQCSGAEEILG 180

Query: 181 GSIYDPTYYSSLFEDGQ---DSKCLSGVSHFGHGDNGTASGSDVSRSKLP--RHFQVADD 237
           GSIYDP YY+SLFE+ Q   +S   + V+H+  G+NG+ S ++ S  K P  R     D+
Sbjct: 181 GSIYDPAYYTSLFEESQTNINSPKATQVNHYSAGNNGSPSAAEASHIKSPIFRSLHSIDE 240

[Close]

BLAST of CmaCh02G011590 vs. TAIR 10
Match: AT1G55535.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 298.5 bits (763), Expect = 4.9e-81
Identity = 156/241 (64.73%), Postives = 189/241 (78.42%), Query Frame = 0


Query: 1   MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL 60
           MMLC SLRDRI PWLRDY +LQS AV LIY QIGCAL+GSLGALYNGVLL+NLAIALFAL
Sbjct: 1   MMLCGSLRDRIHPWLRDYVKLQSLAVFLIYAQIGCALIGSLGALYNGVLLINLAIALFAL 60

Query: 61  VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI 120
           VAIES+SQSLGRTYAVLLF A+ LDISWF+LF  + W+IS+E YG FF FSVKLT+AM++
Sbjct: 61  VAIESNSQSLGRTYAVLLFCALLLDISWFILFTEEIWSISAETYGTFFIFSVKLTMAMEM 120

Query: 121 TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG 180
            GF VRLSSSLLW QIYRLG + ++T +PRE D DLRNSFL+P TP   R+ S +++I+G
Sbjct: 121 IGFFVRLSSSLLWFQIYRLGAAIVDTSLPRETDSDLRNSFLNPPTPAIARQCSGAEEILG 180

Query: 181 GSIYDPTYYSSLFEDGQ---DSKCLSGVSHFGHGDNGTASGSDVSRSKLP--RHFQVADD 237
           GSIYDP YY+SLFE+ Q   +S   + V+H+  G+NG+ S ++ S  K P  R     D+
Sbjct: 181 GSIYDPAYYTSLFEESQTNINSPKATQVNHYSAGNNGSPSAAEASHIKSPIFRSLHSIDE 240

[Close]

BLAST of CmaCh02G011590 vs. TAIR 10
Match: AT3G13420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55535.1); Has 66 Blast hits to 66 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 243.0 bits (619), Expect = 2.4e-64
Identity = 131/213 (61.50%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLC SLR+RI  WLRDY RLQS  +ILIY QIGCAL+GSLGALYNGV+L+NLAIALF LV
Sbjct: 1   MLCVSLRNRIHNWLRDYVRLQSVVLILIYAQIGCALIGSLGALYNGVVLINLAIALFGLV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIES+SQSLGRTYAVLLF AI LD+SWF+LF+ + WNISS+ Y  F+ FSVKLTLAM+I 
Sbjct: 61  AIESNSQSLGRTYAVLLFCAILLDVSWFILFSKEIWNISSDMYQVFYIFSVKLTLAMEIA 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSP------------------ 181
           GF VRLSSSLLW QIYRLG S +++P PR++D DLRNSFL P                  
Sbjct: 121 GFVVRLSSSLLWFQIYRLGASIIDSPFPRQSDSDLRNSFLEPPLLARQRSRDPELRNSFL 180

Query: 182 ATPVAVREPSVSDDIIGGSIYDPTYYSSLFEDG 197
             P   ++ S SD+I+  SI +P  Y+ L + G
Sbjct: 181 QAPAIAKQRSRSDEILEDSIDEPASYTPLLDGG 213

The following BLAST results are available for this feature:

BLAST of CmaCh02G011590 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh02G011590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55535.1	4.9e-81	64.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55535.2	4.9e-81	64.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13420.1	2.4e-64	61.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35471:SF1	OS07G0223700 PROTEIN	coord: 1..242
None	No IPR available	PANTHER	PTHR35471	OS07G0223700 PROTEIN	coord: 1..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G011590.1	CmaCh02G011590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane