CmaCh02G010060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G010060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ADP-ribosylation factor-like
Location	Cma_Chr02: 5975957 .. 5981196 (-)
RNA-Seq Expression	CmaCh02G010060
Synteny	CmaCh02G010060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCACAGAACATTCTCTTGATTTTCCTTCGATTTTCACCATTTTTTTTTTCTCTCTGAAAGGAAACCAAGAAAACTGCAAAGCATTTTCAGACTTAGCCACAGAGATCGGGAGTTGAAGCCAGAAATCGGGCCAAGATGGGTCAAGCGTTTCGGAAACTCTTCGACACGTTTTTCGGCAACAGTGAGATGCGGGTATTATACTGTTCTCTAATTTTTTGTTTTTCTGAAGTATTTGTTAGAATTGGATTTGGCATCTTTACGTGGTTAATTTGATCCTGTTTATTACTGCAAGTTGTTGATTTCTTCTGTCATATTCTGGTGTTCAATTTGTCTCACGGATGGCTTAGGATTGTTGGCCGATGTTTACATAATCCTTTCGATTGGTTTACTTTATGTTTAGCGGTACTATTGTAATAGAGCTGAATGCTAGTGGGATTGGGAACTGCATGAGGTTTGGGTGAAATGATTTGGTTTCATCTGGCTAATACTAGTTCTGAGTAATTTAAATTTTCTTCTGGTTATAGGGGTTTCTCTTGTTGTTATAGCGAGTGCAATCATATATTGGTTATGTTTGATGTCTAATTTGAGATGGAGGTTGTAATCGAACTTTGGGACAGTGAGACTTCTGAAAACTCATCGATGTTGGTCTCTGAGTCGGAAATTCTTACAATTTTACTTGTTCAAGAACTTAGTCTCATGGATTCATGATTGATTGCTCAAACGTTATACTATGGGGAAATGGTTCATTTGTGACCCAATTTAGTAGTTGTAGATGTTAATTTGTTGCTCTCGACAATCATGATTGATTTCTAGGCATAAAGTTTAACATTGCCATTCGACCTAAGTAAGAGGTGTAGCAGTTTATTTATTCTGGAAAAAGTTGTTGCATAGTAGTTTTTATGATTTATTTTATAGAAGGGTAACATGTGTTCGAAAATCACGGTTCACAGGTCTTTGATTTTTTAAGAATTATAATTTGATCTTTAGTTATTTTTGTTCTACTTTTTTGAAAGCAAAACAATTTTTCGTTGATATTGTTGTACAATACATCTGATAGCTTTTCGCCTACTCTATATCTTCTGAACCCACAACATTCTGACAATATTAACAACAATCCAAAGAGAGATACCAAAATCCACACATTGTTACTATTGATTATACAGAAGAATAGTTTGGAAAATCTTTATCTAAAGAAACTCAAAGATTACGATGATATTTAGCTAATTTGAATGCTTCAGCCCAATCCTCTGCAATATTGTAATCAATTTGGTAATTCTTTCTAAGCGTATCAGATTTGACTGCATTTACCTATAATTGCCTTTTTAATAGGATACTTCTGAGAAAAAGCTGAAATAATAGTTGTCTAAACAGTTTTGGGCTTTTACTCTATTCACTTTATATGGCTAGGGCGAACTCGTGGATTACATTTCTATATTGCCTTTTAGGTACTCTATTATTTTTTTATCTGCTTATTTACAAATTATCATGCATTTTATTCCTTTTTCTTGAGCGGTTTAGGTTGTCATGCTTGGCTTGGATGCAGCTGGCAAGACAACTATATTGTACAAGCTGCACATTGGGGAAGTTTTATCGACGGTTCCTACAATTGGTAGGTTCTTCACAATTAAACGAAAAAAACTCAAATAGGGATTTTACCACAAAACTTTTTGATTGAGTTTTTATATCTCCATTTTGTGGAATCATAGCTTTTGTGCTAGCTAGTACGTTTCTTCCCTAAATCAAGGACAATGCCAGATGACAAGGAAAGAGACTTATAAGAGATCTAGGCTTTCTTTCATGAACTTCATTTATCTTACAAAAGTCTGGTATTTCGTTTCTTCCATAAACCTCACAATAGGGTTTTATCAAGTTTGTGGGAGTTTTCCTGTTTTCGGAGGCTGGGTCTGTGTTTCTTTACAATGGTTTCTGATGTTGTTCATTCATTTTTGTTAATGAAAGTGGTATCCTTATTAAGTAAATCTCAAAAGTTCTTTTTGTGTAGAGAGTAGGAACGATTGAGAAAGGAGAGAGGGAGGGGGGAAGGGAGTGTGAGGGGCTGAAGAGAGAACAAAAGAAGCCATAATTGCATCCTCGCTAATAGATACTTGTACCTCCTGTAGAATTATCAACCGAACTTAATATGTCCAAAGGAATACCCATAAGACCTTGTATCTCTCAGATGGTAGCATGGTTCATCTAGTTTCTTGTATGGGTTTTTTTGGTCTTTCTGGTGTCGTGCTAATAACTATTTCAATTCTTTGTGTCATTATTACTGTTAATGTTTTTTATGGCATTCATAGATGTTTGGTGCTTACAATCACAACCTGGTGGATTTTTTCTGTCAATGTGGTAGTAAATTGATTTTTCATTTTCCTCAAGTAGGTTTCAATGTGGAGAAAGTCCAGTATAAAAATGTTGTGTTCACTGTTTGGGATGTTGGAGGACAAGAGAAACTGAGGCCATTGTGGAGGCACTACTTTAATAATACAGATGGACTGGTAATGATTATTATTAGTATTGGATGTCAATGAGTCAGTTTGATTTTAGACTATAAAATATCATTATAGAGTTATTGTTTATGCTATGACTTCCTTTCTTGTTCAAAGAGCCTATCATCATTGTCTGTCTTATAAATTATTGTAAGATTATCTTACAGTCTCACCTAATATTCATCTGACAGAAACAAGTCCATGTACTTACAGCTTTATTCATGCAGATTTATGTGGTAGACTCCATGGACCGAGAGAGAATTGGAAAGGCAAAAACAGAATTTCAGGTTATAGCCCAAGCTTCATCGTGCCTTTAAGTATGGCAGTGTGAGCAACTCTTTATTGGCTGATATGTGATTTTTCTTTCAGGCCATCATTAACGATCCATTTATGCTGAATAGTGTCATATTGGTCTTTGCAAATAAGCAGGATATGGTATGTAGATCTCATCTTCTTCTGGTACATACTATGGAAACAATTAATGTTTTATGTCCATAATTTAATTATATATTTGGGATTGGGAAGACAAAAGATCAACGCTTCAGCCTGCTCCTCGTCACACACACACACACACACACACACTAAAACGAAGTACCTAGTGCATATGTGATGAAGGTCTGAGCTAGTCGTAACATTAGTATTACTCTCTTTGAAATACGCTTACCATGTCACATAAAAATAAAAGGGAAAGTTTCTAACAAGACAAGTTGTGAAAATGACCTTCAACAATTTTTTTTAGATAAAAAAAGTCCTTTAATTGACGTGCATAATAAATAAGAATATTGAATACTGAGTATTTGATATTCATTTGGACAATTGGTTTTGTTTTTGAATAAAGAACACTTTTAAGATTTTGTTTCCACGTGGATTTTCAGTAGTTATCTAAAAAATCAGGTCGTTAGACTTTGGTAAAAGAAAGGGACAAAAATGTTTTCCTTCTTGAAGTGCATGAAGAATTGGTATAGAAAGCTACCTTACCTTGATGGTGACGAAGGGTGAATTATTTGGTCTAGAGATTTCTTTCTAGTCCCTCCAGTCTGTGTTTGATCCCTTGTGCCTTCCCATTTTTAAAACATATTACGTAGTGAATGGTAGGGGTTGCAACATGAATATAGACAGCTAGAGTAGGGGAAGTATGGAGTCCAGGCTTAGTTATAGCCATTTCTTGAAGCCATAAGACACCAGCCTAGTACATGAAAAGTATGGTGAATAAATAAGGTTGAAGTTGATATTGGGCCATTATCAACTGTTAACTTTTATAAAGATCAGATAGCTTATGAATCAAAATGGTCTCTTGCCTCATTATATTAGGTCACACATACCCCCTAACAGTATCATGTCCAAGCCTTATATGGTTCATAACACCTGTTAATTTCTTCGGTTTGATATTAAAATTGAGTTTCTGTCCAGTTCTAGACCGAAGAGTGGCATTTTCTCGTCAGTTGTTCTTGTGAAACTAACTTGGTTAGCTGTAGACATCAAAGGAGAAAGCCAATTGATTGGAAATAAAGCAGTGAAATTTGAAGGTAAAGTTGAAGATCCGGTGATTTTTAGGAATTACCAAACATTTTACATTATTTTGAAATATTAGCACCGGATCAATTGCTTTGCTACGTACCCAACAAACATTATTGTGAGTCAGAAGGGACAATCCTTTTGACCAGGTAAAAGAATTACTTAAAAAATATCATATAGGACCGAGTGTACACTTCTTTTAGTTGAATTTTGGGAAGAAAAAAGATTGTATTTCTTATGTGGAAGAAAGATTATTTGCCAATAAGGACAAATTCTTACTGATATAATGATAAATGTACCCATAATATAAAGAAGAATATAAAGGAAATCGATGGTGTGTTTTTTGTATATGTGCTCTTGAGGATTTGGAACTGGATTACTTACCATGGAGACATCAGTGTGTGGTTTTTCATTTGAAATTAAGCTTCAGAGATTTTTAGTGTGAATTTGGCTCATAACTGGACTTGTCATTTGATGTTGGAGTAGGTACTTTATTTTTTTACCCTCAATTGGCCTCAGACCCATTTAAATCCCTACCTCTTGGGCGTTTATAACCAAAAAGTTCCCTTCGTTTCTAACTCTTCACCATTGGAGATTGTTGTTGGTTTTTTTTCCCGCTCTTCTTGCAACACGATTTTATTTATCTTGTCCGTACTTTTCTTCTTTCAATCAAGTTCGGTTACTCATACAATAATGATTTTTCTATATTAGAACGGTTGTCTAGCCCTTGGCTTCGACCTTTGCATCATCGATATTTTCTTGGATCGTTCTTATGAAATTTTGAACGATTTCGTTGATCCAGAAAGGAGCCATGACGCCGATGGAAGTATGTCAGGGACTAGGTCTATTTGATCTCAAACAGAGAAGATGGCACATACAAGGAACGTGTGCAATCAGAGGAGATGGACTTTACGAAGGTTTAGACTGGTTAGCTGGAACTCTCAAGGAGATGAGAGCTGCTGGATATTCTTCAGTAGGGACATCATTTTAAAGAGATATAAAAGGTTTCATTCAATTATCCCTCAATCTTTCTTTTTGCCATTTCCAGCCTTTCAAAAATCCATTAAACCTTTTTAGAGTTGTTTGTATTTTGTAAGTTCAGGTTGGCTGGTTGAAAGCTGACTCCTACACTTCGCAGATTTCAAATTGTAATCAGAATTGTTTCCATTATCAAACTTGAAATTATCAGGTGCCTACCCCTTGGCCTTGACCTTTGAACGTTTAACTAGAA

mRNA sequence

CTTCTTCACAGAACATTCTCTTGATTTTCCTTCGATTTTCACCATTTTTTTTTTCTCTCTGAAAGGAAACCAAGAAAACTGCAAAGCATTTTCAGACTTAGCCACAGAGATCGGGAGTTGAAGCCAGAAATCGGGCCAAGATGGGTCAAGCGTTTCGGAAACTCTTCGACACGTTTTTCGGCAACAGTGAGATGCGGGTTGTCATGCTTGGCTTGGATGCAGCTGGCAAGACAACTATATTGTACAAGCTGCACATTGGGGAAGTTTTATCGACGGTTCCTACAATTGGTTTCAATGTGGAGAAAGTCCAGTATAAAAATGTTGTGTTCACTGTTTGGGATGTTGGAGGACAAGAGAAACTGAGGCCATTGTGGAGGCACTACTTTAATAATACAGATGGACTGATTTATGTGGTAGACTCCATGGACCGAGAGAGAATTGGAAAGGCAAAAACAGAATTTCAGGCCATCATTAACGATCCATTTATGCTGAATAGTGTCATATTGGTCTTTGCAAATAAGCAGGATATGAAAGGAGCCATGACGCCGATGGAAGTATGTCAGGGACTAGGTCTATTTGATCTCAAACAGAGAAGATGGCACATACAAGGAACGTGTGCAATCAGAGGAGATGGACTTTACGAAGGTTTAGACTGGTTAGCTGGAACTCTCAAGGAGATGAGAGCTGCTGGATATTCTTCAGTAGGGACATCATTTTAAAGAGATATAAAAGGTTGGCTGGTTGAAAGCTGACTCCTACACTTCGCAGATTTCAAATTGTAATCAGAATTGTTTCCATTATCAAACTTGAAATTATCAGGTGCCTACCCCTTGGCCTTGACCTTTGAACGTTTAACTAGAA

Coding sequence (CDS)

ATGGGTCAAGCGTTTCGGAAACTCTTCGACACGTTTTTCGGCAACAGTGAGATGCGGGTTGTCATGCTTGGCTTGGATGCAGCTGGCAAGACAACTATATTGTACAAGCTGCACATTGGGGAAGTTTTATCGACGGTTCCTACAATTGGTTTCAATGTGGAGAAAGTCCAGTATAAAAATGTTGTGTTCACTGTTTGGGATGTTGGAGGACAAGAGAAACTGAGGCCATTGTGGAGGCACTACTTTAATAATACAGATGGACTGATTTATGTGGTAGACTCCATGGACCGAGAGAGAATTGGAAAGGCAAAAACAGAATTTCAGGCCATCATTAACGATCCATTTATGCTGAATAGTGTCATATTGGTCTTTGCAAATAAGCAGGATATGAAAGGAGCCATGACGCCGATGGAAGTATGTCAGGGACTAGGTCTATTTGATCTCAAACAGAGAAGATGGCACATACAAGGAACGTGTGCAATCAGAGGAGATGGACTTTACGAAGGTTTAGACTGGTTAGCTGGAACTCTCAAGGAGATGAGAGCTGCTGGATATTCTTCAGTAGGGACATCATTTTAA

Protein sequence

MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF

Homology

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BLAST of CmaCh02G010060 vs. ExPASy Swiss-Prot
Match: P34727 (ADP-ribosylation factor OS=Ajellomyces capsulatus OX=5037 GN=ARF PE=1 SV=3)

HSP 1 Score: 255.4 bits (651), Expect = 5.2e-67
Identity = 112/179 (62.57%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MG AF KLFD  +G  EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1   MGMAFSKLFDRIWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           + FTVWDVGGQ+K+RPLWRHYF NT G+I+VVDS DR+R+ +A+ E Q ++N+  + +++
Sbjct: 61  IQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDAL 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTLKE 180
           +LVFANKQD+  AM+P E+ Q LGL  L +R W+IQ TCA  GDGLYEGL+WLA  LK+
Sbjct: 121 LLVFANKQDLPNAMSPAEITQQLGLQSLTRRAWYIQSTCATTGDGLYEGLEWLANALKK 179

[Close]

BLAST of CmaCh02G010060 vs. ExPASy Swiss-Prot
Match: P84081 (ADP-ribosylation factor 2 OS=Bos taurus OX=9913 GN=ARF2 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-65
Identity = 110/181 (60.77%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MG  F KLF + FG  EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1   MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           + FTVWDVGGQ+K+RPLWRHYF NT GLI+VVDS DRER+ +A+ E   ++ +  + ++V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAV 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTLKEM 180
           +LVF NKQD+  AM   E+   LGL  L+QR W+IQ TCA  GDGLYEGLDWL+  LK  
Sbjct: 121 LLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180

Query: 181 R 182
           +
Sbjct: 181 K 181

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BLAST of CmaCh02G010060 vs. ExPASy Swiss-Prot
Match: Q8BSL7 (ADP-ribosylation factor 2 OS=Mus musculus OX=10090 GN=Arf2 PE=1 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-65
Identity = 110/181 (60.77%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MG  F KLF + FG  EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1   MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           + FTVWDVGGQ+K+RPLWRHYF NT GLI+VVDS DRER+ +A+ E   ++ +  + ++V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAV 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTLKEM 180
           +LVF NKQD+  AM   E+   LGL  L+QR W+IQ TCA  GDGLYEGLDWL+  LK  
Sbjct: 121 LLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180

Query: 181 R 182
           +
Sbjct: 181 K 181

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BLAST of CmaCh02G010060 vs. ExPASy Swiss-Prot
Match: P84082 (ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-65
Identity = 110/181 (60.77%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MG  F KLF + FG  EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1   MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           + FTVWDVGGQ+K+RPLWRHYF NT GLI+VVDS DRER+ +A+ E   ++ +  + ++V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAV 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTLKEM 180
           +LVF NKQD+  AM   E+   LGL  L+QR W+IQ TCA  GDGLYEGLDWL+  LK  
Sbjct: 121 LLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180

Query: 181 R 182
           +
Sbjct: 181 K 181

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BLAST of CmaCh02G010060 vs. ExPASy Swiss-Prot
Match: P91924 (ADP-ribosylation factor OS=Dugesia japonica OX=6161 PE=2 SV=3)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-65
Identity = 111/178 (62.36%), Postives = 139/178 (78.09%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MG     L D  FG  EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1   MGNLVTHLLDRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           + FTVWDVGGQ+K+RPLWRHYF NT GLI+VVDS DRER+ +A+ E   ++N+  + ++V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLNEDELRDAV 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTLK 179
           +LVFANKQD+  AM P E+   LGL  L+ R W+IQ TCA  GDGLYEGLDWL+ TLK
Sbjct: 121 LLVFANKQDLPNAMNPAEITDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSTTLK 178

[Close]

BLAST of CmaCh02G010060 vs. TAIR 10
Match: AT5G17060.1 (ADP-ribosylation factor B1B )

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-101
Identity = 170/192 (88.54%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MGQAFRKLFDTFFGN EMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1   MGQAFRKLFDTFFGNQEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           V+FTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDS+DRERIGKAK EFQ II DPFMLNS+
Sbjct: 61  VMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQEIIKDPFMLNSI 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTLKEM 180
           ILVFANKQDM+GAM+P EVC+GLGLFDLK R+WHIQGTCA+RGDGLYEGLDWL+ TLK++
Sbjct: 121 ILVFANKQDMRGAMSPREVCEGLGLFDLKNRKWHIQGTCALRGDGLYEGLDWLSSTLKDV 180

Query: 181 RAAGYSSVGTSF 193
           +AAG++SVG SF
Sbjct: 181 KAAGFTSVGHSF 192

[Close]

BLAST of CmaCh02G010060 vs. TAIR 10
Match: AT3G03120.1 (ADP-ribosylation factor B1C )

HSP 1 Score: 365.9 bits (938), Expect = 1.9e-101
Identity = 171/192 (89.06%), Postives = 182/192 (94.79%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MGQ FRKLFDTFFGN EMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1   MGQTFRKLFDTFFGNQEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           V+FTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDS+DRERIGKAK EFQ II DPFMLNSV
Sbjct: 61  VIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQDIIRDPFMLNSV 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTLKEM 180
           ILVFANKQDM+GAM+P EVC+GLGL DLK R+WHIQGTCA++GDGLYEGLDWL+ TLKE+
Sbjct: 121 ILVFANKQDMRGAMSPREVCEGLGLLDLKNRKWHIQGTCALQGDGLYEGLDWLSATLKEV 180

Query: 181 RAAGYSSVGTSF 193
           +AAGYSSVG SF
Sbjct: 181 KAAGYSSVGPSF 192

[Close]

BLAST of CmaCh02G010060 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 244.2 bits (622), Expect = 8.5e-65
Identity = 107/177 (60.45%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MG +F KLF   F   EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           + FTVWDVGGQ+K+RPLWRHYF NT GLI+VVDS DR+R+ +A+ E   ++N+  + ++V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTL 178
           +LVFANKQD+  AM   E+   LGL  L+QR W+IQ TCA  G+GLYEGLDWL+  +
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

[Close]

BLAST of CmaCh02G010060 vs. TAIR 10
Match: AT1G23490.1 (ADP-ribosylation factor 1 )

HSP 1 Score: 244.2 bits (622), Expect = 8.5e-65
Identity = 107/177 (60.45%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MG +F KLF   F   EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           + FTVWDVGGQ+K+RPLWRHYF NT GLI+VVDS DR+R+ +A+ E   ++N+  + ++V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTL 178
           +LVFANKQD+  AM   E+   LGL  L+QR W+IQ TCA  G+GLYEGLDWL+  +
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

[Close]

BLAST of CmaCh02G010060 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F )

HSP 1 Score: 244.2 bits (622), Expect = 8.5e-65
Identity = 107/177 (60.45%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
           MG +F KLF   F   EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSMDRERIGKAKTEFQAIINDPFMLNSV 120
           + FTVWDVGGQ+K+RPLWRHYF NT GLI+VVDS DR+R+ +A+ E   ++N+  + ++V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 ILVFANKQDMKGAMTPMEVCQGLGLFDLKQRRWHIQGTCAIRGDGLYEGLDWLAGTL 178
           +LVFANKQD+  AM   E+   LGL  L+QR W+IQ TCA  G+GLYEGLDWL+  +
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

The following BLAST results are available for this feature:

BLAST of CmaCh02G010060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34727	5.2e-67	62.57	ADP-ribosylation factor OS=Ajellomyces capsulatus OX=5037 GN=ARF PE=1 SV=3	[more]
P84081	1.7e-65	60.77	ADP-ribosylation factor 2 OS=Bos taurus OX=9913 GN=ARF2 PE=2 SV=1	[more]
Q8BSL7	1.7e-65	60.77	ADP-ribosylation factor 2 OS=Mus musculus OX=10090 GN=Arf2 PE=1 SV=2	[more]
P84082	1.7e-65	60.77	ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1	[more]
P91924	1.7e-65	62.36	ADP-ribosylation factor OS=Dugesia japonica OX=6161 PE=2 SV=3	[more]

BLAST of CmaCh02G010060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17060.1	1.5e-101	88.54	ADP-ribosylation factor B1B	[more]
AT3G03120.1	1.9e-101	89.06	ADP-ribosylation factor B1C	[more]
AT1G70490.1	8.5e-65	60.45	Ras-related small GTP-binding family protein	[more]
AT1G23490.1	8.5e-65	60.45	ADP-ribosylation factor 1	[more]
AT1G10630.1	8.5e-65	60.45	ADP-ribosylation factor A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 74..99 score: 38.91 coord: 47..71 score: 30.82 coord: 119..140 score: 27.27 coord: 19..42 score: 46.81
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 9..177 e-value: 1.3E-17 score: 74.5
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 6..175 e-value: 3.1E-69 score: 231.9
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 8.5E-98 score: 340.9
None	No IPR available	PANTHER	PTHR11711:SF389	ADP-RIBOSYLATION FACTOR 1-LIKE 2	coord: 1..191
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..191
None	No IPR available	PROSITE	PS51417	ARF	coord: 11..177 score: 22.339817
None	No IPR available	CDD	cd04150	Arf1_5_like	coord: 18..176 e-value: 7.81766E-104 score: 293.544
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..186 e-value: 1.4E-70 score: 238.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..181
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 16..136 e-value: 3.9E-22 score: 76.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G010060.1	CmaCh02G010060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding