Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAATCGAAGGCCTCGCTCATAGGCCGTTGAAAGACTTGGCTGATGAGTTAGTGAATTTGAAGTTCAATTGTGTGAGACTCACGTATGCGACTCATATGTTTACTCGCTATGCTAATAGGACTGTTGAAGAGAATTTTGACCTTCTTGATTTGAGAGCTTCGAAAGCTGGGTTGGCTTCGCATAATCCGTTTATATTGAATATGACCATTTTTGACGCTTATGAAGCTGTTGTCGATGTGCTTGGGACAAGTGGGTTGATGGTGATAGCAGATAATCATATTAGTCAGCCGAGATGGTGTTGCTCTCTTAACGACGGAAATGGTTTCTTTGGAGATCGCTATTTCGACCCTCAAGAATGGTTGGAAGGTCTTCGTTTGGTTGCTCGACGATTTACTAACAAATTGAATGTACGTAACTTTTGAACTTTTGAAATTATTTTATGAAGTATAAAACAAATAAAAGTACATTGTTAATTAACAACAGGTAGTAGCCATGAGTCTACGAAACGAACTTCGAGGAGCAAAATCGAGCTCGAAAGATTGGAACAAGTACATGACACAAGGAGCAACAACCATCCATGACATAAATCCAAACCTCCTCGTAATCGTTTCAGGTCTAAACTTCGACAACGACCTAAGATGTCAAAGACATAACCCGTTGCCACTAAACAACCTACACAACAAGCTCGTTTTTGAAGTGCACTTATATTCGTTTAGCGGAGCTACGAAAACAAAGTTCATCACGAACCCACTAAACAAAATATGCTCAGCAATCATCAATGGGTTTGTGGAGAGAGCTGAGTTTGTAATGCAAGGAGCTGAGGCAGTTCCTTTGTTTGTTAGTGAGTTTGGGTTTGATCAAAGGGGTACCAATGTTGCTGATGATAGGTTCTCGAGCTGCTTCGTTGCTCATCTTGCTAGGACAGATTTGGATTGGGCGCTATGGGCTTGGCAAGGTAGCTATTATTATCGACAGGGTCAGGCTCAATCCGACGAAGTGTTCGGAGTTTTGAATTATAATTGGAGTGACGTTAGAAACCCTCATTTTTCTAAGACGTTTCAGCTCTTGCAAACCATGTTGCGAGGTACGGATTTGTTGAATTAACTTGCTTTTGAATCTTGTTTTAATTTATAGGTTAACTTTTTTTCTTCTTTTGGGAATTTTTATGAACAAAGATCCGAATTCAAATGCACCAAACTCTTATGTTATGTATCATCCACAAAGTGGTCAATGTGTTCGAGTGAAGGACATGATGAGCAAGGACATCTATCTAAACGACTGTTCCAATGCAAGCCATTGGAGTCATCGAGGAGACGGGACGCCAATTGAGCTAGAGGCGACCAGTTTGTGTTTAAAAGCCGATAGAGATGGGCTTCGACCCTTACTCTCGAGAGACTGTTCGGGCGACGAAAGTGCTTGGACAACCATTTCTAACTCTAAGCTTCATTTGGCTACGTTCACGAGACAAGGGAATGGTTTGTGTTTAGAGAAAGAGAGCTCGAATTCAACGAGGATTGTGATGGGTAGATGTCTTTGTGTTGGTGATGATTCAAATTGCTTAGATGATACTCGGTCTCAATGGTTTGAACTTGTTGGGACCAATACTTTGTAA
mRNA sequence
ATGCTAATCGAAGGCCTCGCTCATAGGCCGTTGAAAGACTTGGCTGATGAGTTAGTGAATTTGAAGTTCAATTGTGTGAGACTCACGTATGCGACTCATATGTTTACTCGCTATGCTAATAGGACTGTTGAAGAGAATTTTGACCTTCTTGATTTGAGAGCTTCGAAAGCTGGGTTGGCTTCGCATAATCCGTTTATATTGAATATGACCATTTTTGACGCTTATGAAGCTGTTGTCGATGTGCTTGGGACAAGTGGGTTGATGGTGATAGCAGATAATCATATTAGTCAGCCGAGATGGTGTTGCTCTCTTAACGACGGAAATGGTTTCTTTGGAGATCGCTATTTCGACCCTCAAGAATGGTTGGAAGGTCTTCGTTTGGTTGCTCGACGATTTACTAACAAATTGAATGTAGTAGCCATGAGTCTACGAAACGAACTTCGAGGAGCAAAATCGAGCTCGAAAGATTGGAACAAGTACATGACACAAGGAGCAACAACCATCCATGACATAAATCCAAACCTCCTCGTAATCGTTTCAGGTCTAAACTTCGACAACGACCTAAGATGTCAAAGACATAACCCGTTGCCACTAAACAACCTACACAACAAGCTCGTTTTTGAAGTGCACTTATATTCGTTTAGCGGAGCTACGAAAACAAAGTTCATCACGAACCCACTAAACAAAATATGCTCAGCAATCATCAATGGGTTTGTGGAGAGAGCTGAGTTTGTAATGCAAGGAGCTGAGGCAGTTCCTTTGTTTGTTAGTGAGTTTGGGTTTGATCAAAGGGGTACCAATGTTGCTGATGATAGGTTCTCGAGCTGCTTCGTTGCTCATCTTGCTAGGACAGATTTGGATTGGGCGCTATGGGCTTGGCAAGGTAGCTATTATTATCGACAGGGTCAGGCTCAATCCGACGAAGTGTTCGGAGTTTTGAATTATAATTGGAGTGACGTTAGAAACCCTCATTTTTCTAAGACGTTTCAGCTCTTGCAAACCATGTTGCGAGATCCGAATTCAAATGCACCAAACTCTTATGTTATGTATCATCCACAAAGTGGTCAATGTGTTCGAGTGAAGGACATGATGAGCAAGGACATCTATCTAAACGACTGTTCCAATGCAAGCCATTGGAGTCATCGAGGAGACGGGACGCCAATTGAGCTAGAGGCGACCAGTTTGTGTTTAAAAGCCGATAGAGATGGGCTTCGACCCTTACTCTCGAGAGACTGTTCGGGCGACGAAAGTGCTTGGACAACCATTTCTAACTCTAAGCTTCATTTGGCTACGTTCACGAGACAAGGGAATGGTTTGTGTTTAGAGAAAGAGAGCTCGAATTCAACGAGGATTGTGATGGGTAGATGTCTTTGTGTTGGTGATGATTCAAATTGCTTAGATGATACTCGGTCTCAATGGTTTGAACTTGTTGGGACCAATACTTTGTAA
Coding sequence (CDS)
ATGCTAATCGAAGGCCTCGCTCATAGGCCGTTGAAAGACTTGGCTGATGAGTTAGTGAATTTGAAGTTCAATTGTGTGAGACTCACGTATGCGACTCATATGTTTACTCGCTATGCTAATAGGACTGTTGAAGAGAATTTTGACCTTCTTGATTTGAGAGCTTCGAAAGCTGGGTTGGCTTCGCATAATCCGTTTATATTGAATATGACCATTTTTGACGCTTATGAAGCTGTTGTCGATGTGCTTGGGACAAGTGGGTTGATGGTGATAGCAGATAATCATATTAGTCAGCCGAGATGGTGTTGCTCTCTTAACGACGGAAATGGTTTCTTTGGAGATCGCTATTTCGACCCTCAAGAATGGTTGGAAGGTCTTCGTTTGGTTGCTCGACGATTTACTAACAAATTGAATGTAGTAGCCATGAGTCTACGAAACGAACTTCGAGGAGCAAAATCGAGCTCGAAAGATTGGAACAAGTACATGACACAAGGAGCAACAACCATCCATGACATAAATCCAAACCTCCTCGTAATCGTTTCAGGTCTAAACTTCGACAACGACCTAAGATGTCAAAGACATAACCCGTTGCCACTAAACAACCTACACAACAAGCTCGTTTTTGAAGTGCACTTATATTCGTTTAGCGGAGCTACGAAAACAAAGTTCATCACGAACCCACTAAACAAAATATGCTCAGCAATCATCAATGGGTTTGTGGAGAGAGCTGAGTTTGTAATGCAAGGAGCTGAGGCAGTTCCTTTGTTTGTTAGTGAGTTTGGGTTTGATCAAAGGGGTACCAATGTTGCTGATGATAGGTTCTCGAGCTGCTTCGTTGCTCATCTTGCTAGGACAGATTTGGATTGGGCGCTATGGGCTTGGCAAGGTAGCTATTATTATCGACAGGGTCAGGCTCAATCCGACGAAGTGTTCGGAGTTTTGAATTATAATTGGAGTGACGTTAGAAACCCTCATTTTTCTAAGACGTTTCAGCTCTTGCAAACCATGTTGCGAGATCCGAATTCAAATGCACCAAACTCTTATGTTATGTATCATCCACAAAGTGGTCAATGTGTTCGAGTGAAGGACATGATGAGCAAGGACATCTATCTAAACGACTGTTCCAATGCAAGCCATTGGAGTCATCGAGGAGACGGGACGCCAATTGAGCTAGAGGCGACCAGTTTGTGTTTAAAAGCCGATAGAGATGGGCTTCGACCCTTACTCTCGAGAGACTGTTCGGGCGACGAAAGTGCTTGGACAACCATTTCTAACTCTAAGCTTCATTTGGCTACGTTCACGAGACAAGGGAATGGTTTGTGTTTAGAGAAAGAGAGCTCGAATTCAACGAGGATTGTGATGGGTAGATGTCTTTGTGTTGGTGATGATTCAAATTGCTTAGATGATACTCGGTCTCAATGGTTTGAACTTGTTGGGACCAATACTTTGTAA
Protein sequence
MLIEGLAHRPLKDLADELVNLKFNCVRLTYATHMFTRYANRTVEENFDLLDLRASKAGLASHNPFILNMTIFDAYEAVVDVLGTSGLMVIADNHISQPRWCCSLNDGNGFFGDRYFDPQEWLEGLRLVARRFTNKLNVVAMSLRNELRGAKSSSKDWNKYMTQGATTIHDINPNLLVIVSGLNFDNDLRCQRHNPLPLNNLHNKLVFEVHLYSFSGATKTKFITNPLNKICSAIINGFVERAEFVMQGAEAVPLFVSEFGFDQRGTNVADDRFSSCFVAHLARTDLDWALWAWQGSYYYRQGQAQSDEVFGVLNYNWSDVRNPHFSKTFQLLQTMLRDPNSNAPNSYVMYHPQSGQCVRVKDMMSKDIYLNDCSNASHWSHRGDGTPIELEATSLCLKADRDGLRPLLSRDCSGDESAWTTISNSKLHLATFTRQGNGLCLEKESSNSTRIVMGRCLCVGDDSNCLDDTRSQWFELVGTNTL
Homology
BLAST of CmaCh02G010000 vs. ExPASy Swiss-Prot
Match:
C0HLA0 (Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)
HSP 1 Score: 365.2 bits (936), Expect = 1.2e-99
Identity = 204/497 (41.05%), Postives = 290/497 (58.35%), Query Frame = 0
Query: 2 LIEGLAHRPLKDLADELVNLKFNCVRLTYATHMFTR--YANRTVEENFDLLDLRASKAGL 61
L EGL P+ +A + +L FNCVRLTY+ HM TR Y N TV + F L+L + +G+
Sbjct: 62 LPEGLNRLPVATVAHTISSLGFNCVRLTYSIHMLTRTSYTNATVAQTFARLNLTEAASGI 121
Query: 62 ASHNPFILNMTIFDAYEAVVDVLGTSGLMVIADNHISQPRWCCSLNDGNGFFGDRYFDPQ 121
+NP +L++ AY VV L +G+MVI DNH+S+P+WCC+++DGNGFFGDRYF+P
Sbjct: 122 EHNNPELLDLGHVAAYHHVVAALSEAGVMVILDNHVSKPKWCCAVDDGNGFFGDRYFNPN 181
Query: 122 EWLEGLRLVARRFTNKLNVVAMSLRNELRGAKSSSKDWNKYMTQGATTIHDINPNLLVIV 181
W+EGL L+A F N NVVAMSLRNELRG +S+ W+++M GA T+H NP +LVI+
Sbjct: 182 TWVEGLGLMATYFNNTPNVVAMSLRNELRGNRSTPISWSRHMQWGAATVHKANPKVLVIL 241
Query: 182 SGLNFDNDLRCQRHNPLPLNNLHNKLVFEVHLYSFSGATKTKFITNPLNKICSAIINGFV 241
SGL FD DL P+ L K+V+E H YSF + T N +C F
Sbjct: 242 SGLQFDTDLSFLPVLPVTL-PFKEKIVYEGHWYSFG----VPWRTGLPNDVCKNETGRFK 301
Query: 242 ERAEFVMQGAE--AVPLFVSEFGFDQRGTNVADDRFSSCFVAHLARTDLDWALWAWQGSY 301
FV A A PLF+SEFG DQR N D+R+ +C +A+LA DLDWALW GSY
Sbjct: 302 SNVGFVTSSANATAAPLFMSEFGIDQRYVNDNDNRYLNCILAYLAEEDLDWALWTMGGSY 361
Query: 302 YYR---QGQAQSDEVFGVLNYNWSDVRNPHFSKTFQLLQTMLRDPNSNAPNSY--VMYHP 361
YYR Q +E +G N++WS +RNP F + +Q ++DP AP Y ++YHP
Sbjct: 362 YYRSDKQPVKDFEETYGFFNHDWSRIRNPDFISRLKEIQQPIQDPYL-APGPYYQIIYHP 421
Query: 362 QSGQCVRVKDMMSKDIYLNDCSNA-SHWSHRGD-GTPIELEATSLCLKADRDGLRPLLSR 421
SG C V+ + ++L C + S W++ PI L +S C+ +GL +++
Sbjct: 422 ASGLC--VESGIGNTVHLGSCQSVRSRWNYDASVKGPIGLMGSSSCISTQGNGLPAIMTE 481
Query: 422 DCSG-DESAWTTISNSKLHLATFTRQGNG----LCLEKESSNSTRIVMGRCLCVGDDSNC 481
+CS + + W+T+S+++L L T +G +CL + S S I C+C+ DS+C
Sbjct: 482 NCSAPNNTLWSTVSSAQLQLGTRVLGKDGKEKWMCL--DGSKSPLISTNECICI-TDSHC 541
BLAST of CmaCh02G010000 vs. ExPASy Swiss-Prot
Match:
P19487 (Major extracellular endoglucanase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=engXCA PE=1 SV=2)
HSP 1 Score: 75.5 bits (184), Expect = 1.9e-12
Identity = 85/361 (23.55%), Postives = 143/361 (39.61%), Query Frame = 0
Query: 2 LIEGLAHRPLKDLADELVNLKFNCVRLTYATHMFTRYANRTVEENFDLLDLRASKAGLAS 61
++ GL R KD+ ++ L FN VRL + + T+ + D S
Sbjct: 58 VMHGLWARNWKDMIVQMQGLGFNAVRLPFCP---ATLRSDTMPASIDY-----------S 117
Query: 62 HNPFILNMTIFDAYEAVVDVLGTSGLMVIADNHISQPRWCCSLNDGNGFFGDRYFDPQEW 121
N + +T + V+ G+ V+ D+H C +++ ++ Y + Q W
Sbjct: 118 RNADLQGLTSLQILDKVIAEFNARGMYVLLDHHTPD---CAGISE--LWYTGSYTEAQ-W 177
Query: 122 LEGLRLVARRFTNKLNVVAMSLRNELRGAK-----SSSKDWNKYMTQGATTIHDINPNLL 181
L LR VA R+ N V+ + L+NE GA +++ DWNK +G+ + + P L
Sbjct: 178 LADLRFVANRYKNVPYVLGLDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWL 237
Query: 182 VIVSGLNFDNDLRCQRH---------NPL---PLNNLHNKLVFEVHLYSFSGATKTKFIT 241
+ V G+ DN + C + PL PLN N+L+ H+Y ++ F
Sbjct: 238 IAVEGIT-DNPV-CSTNGGIFWGGNLQPLACTPLNIPANRLLLAPHVYGPDVFVQSYFND 297
Query: 242 NPLNKICSAIINGFVERAEFVMQGAEAVPLFVSEFGFDQRGTNVADDRFSSCFVAHLART 301
+ AI ER G A L + EFG + D + V +L
Sbjct: 298 SNFPNNMPAI----WERHFGQFAGTHA--LLLGEFGGKYGEGDARDKTWQDALVKYLRSK 357
Query: 302 DLDWAL-WAWQGSYYYRQGQAQSDEVFGVLNYNWSDVRNPHFSKTFQLLQTMLRDPNSNA 345
++ W+W S + G+L +W+ VR + LL+T+ +
Sbjct: 358 GINQGFYWSW---------NPNSGDTGGILRDDWTSVRQDKMT----LLRTLWGTAGNTT 377
BLAST of CmaCh02G010000 vs. TAIR 10
Match:
AT3G26130.1 (Cellulase (glycosyl hydrolase family 5) protein )
HSP 1 Score: 367.5 bits (942), Expect = 1.7e-101
Identity = 199/482 (41.29%), Postives = 281/482 (58.30%), Query Frame = 0
Query: 4 EGLAHRPLKDLADELVNLKFNCVRLTYATHMFTR---YANRTVEENFDLLDLRASKAGLA 63
EGL+ +PL +A+++V++ FNCVRLT+ ++ T A TV ++ L + +G
Sbjct: 57 EGLSKQPLDAIAEKIVSMGFNCVRLTWPLYLATDESFSAFMTVRQSLRKFRLFEAVSGFQ 116
Query: 64 SHNPFILNMTIFDAYEAVVDVLGTSGLMVIADNHISQPRWCCSLNDGNGFFGDRYFDPQE 123
+HNP IL++ + A++ VV L +MVI DNHISQP WCCS NDGNGFFGD++ +PQ
Sbjct: 117 THNPTILDLPLIKAFQEVVYCLEKHRVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQV 176
Query: 124 WLEGLRLVARRFTN-KLNVVAMSLRNELRGAKSSSKDWNKYMTQGATTIHDINPNLLVIV 183
W++GL+ +A F N NVV MSLRNELRG K + KDW KYM +GA +H +NPN+LVIV
Sbjct: 177 WIKGLKKMASMFANVSSNVVGMSLRNELRGPKQNIKDWYKYMREGAEAVHSVNPNVLVIV 236
Query: 184 SGLNFDNDLRCQRHNPLPLNNLHNKLVFEVHLYSFSGATKTKFITNPLNKICSAIINGFV 243
SGLN+ DL R P + + K+VFE+H Y F + + LNKIC +
Sbjct: 237 SGLNYATDLSFLRERPFEV-SFRRKVVFEIHWYGFWNTWE----GDNLNKICGKETEKMM 296
Query: 244 ERAEFVMQGAEAVPLFVSEFGFDQRGTNVADDRFSSCFVAHLARTDLDWALWAWQGSYYY 303
+ + F+++ + +PLFVSEFG DQRG N D++F SCF+A A DLDW+LW GSYY
Sbjct: 297 KMSGFLLE--KGIPLFVSEFGIDQRGNNANDNKFLSCFMALAADRDLDWSLWTLAGSYYI 356
Query: 304 RQGQAQSDEVFGVLNYNWSDVRNPHFSKTFQLLQTMLRDPNSNAPNSYVMYHPQSGQCVR 363
R+ SDE +GVL++NWS +RN + +QT P +M+HP +G C+
Sbjct: 357 REKSIGSDESYGVLDFNWSSIRNSTILQMISAIQTPFIGLMETQPKK-IMFHPSTGLCIV 416
Query: 364 VKDMMSKDIYLNDCSNASHWSHRGDGTPIELEATSLCLKADRDG----LRPLLSRDCSGD 423
K + + L C+ + W E LCLKA G LR S
Sbjct: 417 RKSLF--QLKLGSCNRSESWRLSSHRVLSLAEEQILCLKAYEKGKSVKLRLFFSESYC-- 476
Query: 424 ESAWTTISNSKLHLATFTRQGNGLCLEKESSNSTRIVMGRCLCVGDDSNCLDDTRSQWFE 478
S W S+SK+ L++ T+ G +CL+ ++ N+ IV C C+ +S+C D RSQWF+
Sbjct: 477 -SKWKLFSDSKMQLSSITKNGFSVCLDVDTENN-NIVTNSCKCLRGNSSC--DPRSQWFK 522
BLAST of CmaCh02G010000 vs. TAIR 10
Match:
AT1G13130.1 (Cellulase (glycosyl hydrolase family 5) protein )
HSP 1 Score: 362.5 bits (929), Expect = 5.4e-100
Identity = 185/481 (38.46%), Postives = 280/481 (58.21%), Query Frame = 0
Query: 1 MLIEGLAHRPLKDLADELVNLKFNCVRLTYATHMFTRYA---NRTVEENFDLLDLRASKA 60
++ EGL+ +P+ +A ++V + FNCVRLT+ + T N TV ++F L L
Sbjct: 64 VVAEGLSKQPVDAVAKKIVEMGFNCVRLTWPLDLMTNETLANNVTVRQSFQSLGLNDDIV 123
Query: 61 GLASHNPFILNMTIFDAYEAVVDVLGTSGLMVIADNHISQPRWCCSLNDGNGFFGDRYFD 120
G ++NP I+++ + +AY+ VV LG + +MVI DNH+++P WCC+ +DGNGFFGD++FD
Sbjct: 124 GFQTNNPSIIDLPLIEAYKTVVTTLGNNDVMVILDNHLTKPGWCCANDDGNGFFGDQFFD 183
Query: 121 PQEWLEGLRLVARRFTNKLNVVAMSLRNELRGAKSSSKDWNKYMTQGATTIHDINPNLLV 180
P W+ L+ +A F NVV MSLRNELRG K + DW KYM QGA +H N +LV
Sbjct: 184 PTVWVAALKKMAATFNGVSNVVGMSLRNELRGPKQNVNDWFKYMQQGAEAVHSANNKVLV 243
Query: 181 IVSGLNFDNDLRCQRHNPLPLNNLHNKLVFEVHLYSFSGATKTKFITNPLNKICSAIING 240
I+SGL+FD DL R P+ L + KLVFE+H YSFS + N N IC ++N
Sbjct: 244 ILSGLSFDADLSFVRSRPVKL-SFTGKLVFELHWYSFSDG--NSWAANNPNDICGRVLNR 303
Query: 241 FVERAEFVMQGAEAVPLFVSEFGFDQRGTNVADDRFSSCFVAHLARTDLDWALWAWQGSY 300
+++ + PLF+SEFG D+RG N D+R+ C A D+DW+LWA GSY
Sbjct: 304 IGNGGGYLLN--QGFPLFLSEFGIDERGVNTNDNRYFGCLTGWAAENDVDWSLWALTGSY 363
Query: 301 YYRQGQAQSDEVFGVLNYNWSDVRNPHFSKTFQLLQTMLRDPNSNAPNSYVMYHPQSGQC 360
Y RQG+ +E +GVL+ +W VRN F + LQ+ L+ P +++HP +G C
Sbjct: 364 YLRQGKVGMNEYYGVLDSDWISVRNSSFLQKISFLQSPLQGPGPRTDAYNLVFHPLTGLC 423
Query: 361 VRVKDMMSKDIYLNDCSNASHWSHRGDGTPIELEATSLCLKADRDGLRPLLSR-DCSGDE 420
+ K + L C+++ WS+ + ++ LCL+++ ++R CS
Sbjct: 424 IVRSLDDPKMLTLGPCNSSEPWSYTKKA--LRIKDQQLCLQSNGPKNPVTMTRTSCSTSG 483
Query: 421 SAWTTISNSKLHLATFTRQGNGLCLEKESSNSTRIVMGRCLCVGDDSNCLDDTRSQWFEL 478
S W TIS S++HLA+ T LCL+ +++N+ +V C C+ D +C + SQWF++
Sbjct: 484 SKWQTISASRMHLASTTSNKTSLCLDVDTANN--VVANACKCLSKDKSC--EPMSQWFKI 533
BLAST of CmaCh02G010000 vs. TAIR 10
Match:
AT3G26140.1 (Cellulase (glycosyl hydrolase family 5) protein )
HSP 1 Score: 346.3 bits (887), Expect = 4.0e-95
Identity = 189/483 (39.13%), Postives = 277/483 (57.35%), Query Frame = 0
Query: 1 MLIEGLAHRPLKDLADELVNLKFNCVRLTYATHMFTRYA---NRTVEENFDLLDLRASKA 60
++ EGL+ + + DLA +++ + FNCVR T+ + T N TV ++F L L +
Sbjct: 34 VVAEGLSKQSVDDLAKKIMAMGFNCVRFTWPLDLATNETLANNVTVRQSFQSLGLNDDIS 93
Query: 61 GLASHNPFILNMTIFDAYEAVVDVLGTSGLMVIADNHISQPRWCCSLNDGNGFFGDRYFD 120
G + NP ++++ + +AY+ VV LG + +MVI DNH+++P WCC NDGNGFFGD +FD
Sbjct: 94 GFETKNPSMIDLPLIEAYKKVVAKLGNNNVMVILDNHVTKPGWCCGYNDGNGFFGDTFFD 153
Query: 121 PQEWLEGLRLVARRFTNKLNVVAMSLRNELRGAKSSSKDWNKYMTQGATTIHDINPNLLV 180
P W+ GL +A F NVV MSLRNELRG K + DW KYM QGA +H+ NPN+LV
Sbjct: 154 PTTWIAGLTKIAMTFKGATNVVGMSLRNELRGPKQNVDDWFKYMQQGAEAVHEANPNVLV 213
Query: 181 IVSGLNFDNDLRCQRHNPLPLNNLHNKLVFEVHLYSFSGATKTKFITNPLNKICSAIING 240
I+SGL++D DL R + L KLVFE+H YSF+ T T NP N+ C I+
Sbjct: 214 ILSGLSYDTDLSFVRSRHVNL-TFTRKLVFELHRYSFTN-TNTWSSKNP-NEACGEILKS 273
Query: 241 FVERAEFVMQGAEAVPLFVSEFGFDQRGTNVADDRFSSCFVAHLARTDLDWALWAWQGSY 300
F ++ P+F+SEFG D RG NV D+R+ C + A D+DW++W QGSY
Sbjct: 274 IENGGGFNLRD---FPVFLSEFGIDLRGKNVNDNRYIGCILGWAAENDVDWSIWTLQGSY 333
Query: 301 YYRQGQAQSDEVFGVLNYNWSDVRNPHFSKTFQLLQTMLRDPNSNAPNSYVMYHPQSGQC 360
Y R+G E +G+L+ +W VR+ F + L+ + L+ P S + +++HP +G C
Sbjct: 334 YLREGVVGMSEFYGILDSDWVRVRSQSFLQRLSLILSPLQGPGSQSKVYNLVFHPLTGLC 393
Query: 361 VRVKDMMSKDIYLNDCSNASHWSHRGDGTPIELEATSLCLKADRDGLRPLLSR-DCSGDE 420
+ + + L C+ + WS+ T + L+ SLCL++ LS CS
Sbjct: 394 MLQSILDPTKVTLGLCNESQPWSYTPQNT-LTLKDKSLCLESTGPNAPVKLSETSCSSPN 453
Query: 421 -SAWTTISNSKLHLATFTRQGNGLCLEKESSNSTRIVMGRCLCV-GDDSNCLDDTRSQWF 478
S W TIS S + LA N LCL+ + +N+ ++ C CV G+DS+C D SQWF
Sbjct: 454 LSEWETISASNMLLAA-KSTNNSLCLDVDETNN--LMASNCKCVKGEDSSC--DPISQWF 504
BLAST of CmaCh02G010000 vs. TAIR 10
Match:
AT5G17500.1 (Glycosyl hydrolase superfamily protein )
HSP 1 Score: 323.2 bits (827), Expect = 3.6e-88
Identity = 178/481 (37.01%), Postives = 274/481 (56.96%), Query Frame = 0
Query: 1 MLIEGLAHRPLKDLADELVNLKFNCVRLTYATHMF---TRYANRTVEENFDLLDLRASKA 60
++ EGL+ +P+ ++ ++ ++ FNCVRLT+ + T N TV+++F+ L
Sbjct: 57 VVAEGLSSQPMDSISKKIKDMGFNCVRLTWPLELMINDTLAFNVTVKQSFERYGLDHELQ 116
Query: 61 GLASHNPFILNMTIFDAYEAVVDVLGTSGLMVIADNHISQPRWCCSLNDGNGFFGDRYFD 120
G+ +HNP+I+N + + ++AVV LG +MVI DNH + P WCCS +D + FFGD F+
Sbjct: 117 GIYTHNPYIVNTPLINVFQAVVYSLGRHDVMVILDNHKTVPGWCCSNDDPDAFFGDPKFN 176
Query: 121 PQEWLEGLRLVARRFTNKLNVVAMSLRNELRGAKSSSKDWNKYMTQGATTIHDINPNLLV 180
P W+ GL+ +A F N NVV MSLRNELRG +SKDW KYM +GA +H NPN+LV
Sbjct: 177 PDLWMLGLKKMATIFMNVKNVVGMSLRNELRGYNHTSKDWYKYMQKGAEAVHTSNPNVLV 236
Query: 181 IVSGLNFDNDLRCQRHNPLPLNNLHNKLVFEVHLYSFSGATKTKFITNPLNKICSAIING 240
I+SGLNFD DL + P+ L + KLV E+H YSF+ T ++ ++ +N CS + +
Sbjct: 237 ILSGLNFDADLSFLKDRPVNL-SFKKKLVLELHWYSFTDGT-GQWKSHNVNDFCSQMFSK 296
Query: 241 FVERAEFVMQGAEAVPLFVSEFGFDQRGTNVADDRFSSCFVAHLARTDLDWALWAWQGSY 300
FV+ + PLF+SEFG DQRG ++ +R+ +C +A A DLDWA+WA G Y
Sbjct: 297 ERRTGGFVLD--QGFPLFLSEFGTDQRGGDLEGNRYMNCMLAWAAEKDLDWAVWAVTGVY 356
Query: 301 YYRQGQAQSDEVFGVLNYNWSDVRNPHFSKTFQLLQTMLRDPNSNAPNSYVMYHPQSGQC 360
Y+R+G+ E +G+L+ NW +V N + + ++Q P + ++HP +G C
Sbjct: 357 YFREGKRGVVEAYGMLDANWHNVHNYTYLRRLSVIQPPHTGPGVKHNHHKKIFHPLTGLC 416
Query: 361 -VRVKDMMSKDIYLNDCSNASHWSHRGDGTPIELEATSLCLKADRD-GLRPLLSRDCSGD 420
VR ++ L C+ WS+ G CL+ + G L R C+
Sbjct: 417 LVRKSHCHESELTLGPCTKDEPWSYSHGGILEIRRGHKSCLEGETAVGKSVKLGRICTKI 476
Query: 421 ESAWTTISNSKLHLATFTRQGNGLCLEKESSNSTRIVMGRCLCVGDDSNCLDDTRSQWFE 477
E IS +K+HL+ T G+ +CL+ +S N+ +V C C+ D+ C + SQWF+
Sbjct: 477 EQ----ISATKMHLSFNTSDGSLVCLDVDSDNN--VVANSCNCLTGDTTC--EPASQWFK 525
BLAST of CmaCh02G010000 vs. TAIR 10
Match:
AT5G16700.1 (Glycosyl hydrolase superfamily protein )
HSP 1 Score: 268.1 bits (684), Expect = 1.4e-71
Identity = 165/483 (34.16%), Postives = 253/483 (52.38%), Query Frame = 0
Query: 4 EGLAHRPLKDLADELVNLKFNCVRLTYATHMFTR---YANRTVEENFDLLDLRASKAGLA 63
EGL+ +PL ++ ++V++ FNCVRLT+ + T TV+++F+ L L G+
Sbjct: 58 EGLSKQPLDSISKKIVSMGFNCVRLTWPLDLVTNDTLALKVTVKQSFESLKLFEDVLGIQ 117
Query: 64 SHNPFILNMTIFDAYEAVVDVLGTSGLMVIADNHISQPRWCCSLNDGNGFFGDRYFDPQE 123
+HNP +L++ +F+A++ VV LG +G+MVI DNH++ P WCC ND + FFG +FDP
Sbjct: 118 THNPKLLHLPLFNAFQEVVSNLGENGVMVILDNHLTTPGWCCGDNDLDAFFGYPHFDPLV 177
Query: 124 WLEGLRLVARRFTNKLNVVAMSLRNELRGAKSSSKDWNKYMTQGATTIHDINPNLLVIVS 183
W +GLR +A F N +V+ MSLRNE RGA+ W ++M QGA +H NP LLVI+S
Sbjct: 178 WAKGLRKMATLFRNFTHVIGMSLRNEPRGARDYPDLWFRHMPQGAEAVHAANPKLLVILS 237
Query: 184 GLNFDNDLRCQRHNPLPLNNLHNKLVFEVHLYSFSGATKTKFITNPLNKICSAIINGFVE 243
G++FD +L R + + + +KLVFE+H YSFS + + + N C II
Sbjct: 238 GIDFDTNLSFLRDRSVNV-SFTDKLVFELHWYSFSDG-RDSWRKHNSNDFCVKIIEKVTH 297
Query: 244 RAEFVMQGAEAVPLFVSEFGFDQRGTNVADDRFSSCFVAHLARTDLDWALWAWQGSYYYR 303
F++ PL +SEFG DQRG +++ +R+ +C VA A DLDWA+WA G YY R
Sbjct: 298 NGGFLL--GRGFPLILSEFGTDQRGGDMSGNRYMNCLVAWAAENDLDWAVWALTGDYYLR 357
Query: 304 QGQAQSDEVFGVLNYNWSDVRNPHFSKTFQLLQTMLRDPNSNAPNSYVMYHPQSGQCVRV 363
G LR PN +++HP +G CV
Sbjct: 358 TGPG-------------------------------LR------PNKNLLFHPSTGLCVTN 417
Query: 364 KDMMS-KDIYLNDCSNASHWSHRGDGTPIE--LEATSLCLKADR---DGLRPLLSRDCSG 423
+ + L C + W+ P E L +C++A ++ + C
Sbjct: 418 NPSDNIPTLRLGPCPKSDPWTF----NPSEGILWINKMCVEAPNVVGQKVKLGVGTKC-- 477
Query: 424 DESAWTTISNSKLHLATFTRQGNGLCLEKESSNSTRIVMGRCLCVGDDSNCLDDTRSQWF 478
S IS +K+HL+ T G LCL+ + +++ +V RC + D++C D SQWF
Sbjct: 478 --SKLGQISATKMHLSFKTSNGLLLCLDVDERDNS-VVANRCKFLTMDASC--DPASQWF 488
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
C0HLA0 | 1.2e-99 | 41.05 | Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1 | [more] |
P19487 | 1.9e-12 | 23.55 | Major extracellular endoglucanase OS=Xanthomonas campestris pv. campestris (stra... | [more] |