CmaCh02G007880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G007880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	pumilio homolog 2-like
Location	Cma_Chr02: 4670067 .. 4677580 (-)
RNA-Seq Expression	CmaCh02G007880
Synteny	CmaCh02G007880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTAAAAGGGTTCTCGTTTGGAGCAATAGCCGCCGGACTGATCTCAGCTGTCCCCGCCTTCTTCTCTATATCTCAAATCCTTTGCTTGATCTCATTTCACCACCGGGAACCTAATTTTTTTCGTTTCTTTCTTTCACTTTGATTTTGTCTACCTGTTCTTCCCATCGCTCTTCTTGCCATTTGTAGTTCGATATATTTGCTACTGTTTATTACATGAAAATTATGTCGGGGAATTCTCTGTCTTGGTAGAATTTAGGGTGTAGTGGGAACTAAATGATTTTTAGGACACTTTTTTGGGGCTTGGAATTGGTGGTTGGGTTGTAAAGGTTCCGGATAGGGAATTGGTGGAACGGATGGAAATTTTGGTTTTGATCAGTTTAGAATGACTCCTTTTGAGCTGTAAATAGTGGTTTCTTGTTGTAGGATTTTTTTTTTTTTTTTTTTTAGGCGTAGCTTTTTGTTGTTGCGGTGAGGCAGTGATCAGATAGGGTTAGAAGGGTAAGACCGATGTTTGGTGGCAACGATGGATCGTTTGGTGATGAATTAGAGACGGAGATAGGGTTATTGCTTCGTGAACAGCGTCGGCAAGAGACCGATGATCGAGAGCGGGAGCTGAATTTGTATAGAAGTGGATCAGCTCCACCGACTGTTGAAGGCTCTTTAAGTGCGGTGGGTGGTCTGTTTGGTGGGGTTCCTGGTTCTGCTAATGCCTTTGCGGAGTTATCGGGTTCGAATAATGGTAATGGTTTTGTGTCAGAGGAGCTGCTTAGGTCTGATCCAGCTTACTCATCATACTATTACTCGAATGTGAACCTTAATCCTCGGCTTCCGCCTCCATTGATTTCGAAGGAGGATTGGAAGTCTGCGCAGAGATTGAAAGGGGCTAATTTGGGGTTGGGAGGCATCGGAGAGACGAGGCGATCAAATGTTGGGACGGATAGTGCCGCCAGATCCTTGTTTTCTATGCCTCCTGGGTTTAATGCTAGGAAACAAGCATCTGAGGTCGAGTTGGATAAAGGGCGTGGCGCTACCGAGTGGGGTGGTGACGGTTTGATTGGTTTGCCTGGTTTAGGACTTGGAACCAAACAGAAGAGTCTAGCTGAAATCTTTCAGGTAAATTTCTTCCTTTTACCAGATTCTCTTATTTGATTGTCTTTTTTGCCTTGCTGCTTCAGAATTGTTGTCATTTGAGCATTGAAATCCATTACATGGATTAACAAGCATTTCAGTAAACTAGAAGTCTTGAGGTTATGTTCTAAAATCTGTAACTCGATAATATTCGGGTATTAGTTATTGGTCTGTTCTATTGACTTGATTTTGAATGTTTGATTTTTATTGGTTTGATGATTTTATTCTTATTGACTGTTTCTACTAATTTTGGCCGACTGAATTTGTTTTGAAGTGGTGATATATAAAATTTAATTGATGTTGGCTTTCTAATATATAACAAGTTTTTCTTCCCCGAAATCTGTATAACTCCCTTGCTTGTTATTCTTTCTGCCGCACTAAACTCACGTTTCTTGAGTTTGGGCATTATTAGTATGTTTGTTGCATGGTACTGTTGTGTGTGGTTGTTGTTTACAAAATAATTGAACTTTAAGAAGTCTCAATTATGGATGCGTCTTTTTTCCAATGAGTTTATCTCTAAATGTTTGTGCAGGATGACATGGGTCGCACAACTCCTGTTACTGGGCTGCCATCCCGTCCGACCAGCCGCAATGCCTTTGAGGAAAATGTTGAGACAATGAGTGCCACTGATGAGTTGGCCAATTTGCGACATGACTTGATGGTTTCTGAAGTTATGCGATCTGGTGCAAATGGTCAGAGCTCTGGAGCACCTTCTTCATACACTTATGCCGCAGCCGTGGGTGGTTCATTGTCAAGAAGCAATACGCCCGATCCCCAGCTTGTTGCAAGGGCGCCTAGTCCTTGTCTTACCCCCATTGGAGGCGGGAGAGTTGGAACTGCTGAAAAGAGGAACATTGCAAGCCCAAAATCATTTAATGGCGTCTCATCTGGAATCAACGAGTCTTCAGAACTTGTATCAGCTTTATCTGGTATGAACTTGGCATCAGATGATGCCATAAATGAAGAGGGTCATTTGCTATCTCAAATAAAACAAGATAGTAATAACCAACAGGGCTATGCATATGGCATGCAAGGAGGTCAGAATCATATTAAACAACAGTCATATGCGAAGAAGAACGAGTCCGGGGGTGCACCCAGGTCTTCATTCTCAGACTTGAATGACAACAATGGAGGGGGACCCAACTTCTCCAGAGATAGGCATGCTGAACTGCAACACTCTTCTGTTCCTCCTGCTAGCTTGTTTTTGAAAGGTGGTCAGCATGCTTCATCTCATAACAATGGAGCTCAGTATCAGCATATAGATGGCACAAATTTGACATATCAGAACTTTGGCCTGAGTGGGTACTCGATTAGTCCACCTTTGGCATCTATGATGCCCGGTCAACTCGGCACTGCTAATTTACCAACATTGTTTGAAAATGTTGCCTCAGCTTCAGCTTTGGGAGCCTCTGGTTTGGAGTCACGGGTTCTTGGGGGAGGGTTAGCTTCTGCAAACTTGGCTTCTTCTGCTGCAGATTCACATATTCTTGGTAAATTGGGAGGTCAAATGAGTGGCAATGCTCTTCAGGCATCCTTTGTCGATCCCATTTATCTTCAATACTTGAGGACGCCTGAATATGCTTCAGCACAACTCGGTGCTTTAAATGATCCTTCTCTTGATAGAAATTATCTGGGAAATTCATATATGAACCAGCTAGAACTGCAGAAAGCCTACGGGGCTCTTCTATCACCTCAAAAATCACAATATAGTGTCCCATTCAGTGGTAAATCTGGTGTTTCAAATCATCATGGTTATTTTGGAAATCCAGCTTTTGGAGTTCACATGTCTTATCCTGGAAGTCCTATGGCAAATCCTGTCCTTTCTAACTCCCCTGTAGGACCTGGTAGTCCTGTCAGGCACAATGACATTCATTTGCGCTATCCTTCTGGTACAAGGAACTTAGGTGGCGTTATGAGTCCTTGGCATCTGGAGGTTGGAAATATCAACGAAAGCTTCTCATCCTCTCTCTTAGAGGAGTTCAAGAGCAATAAGACAAAATGTTTTGAACTTTCTGAAATTGCCGGTCATGTGTTCGAATTTAGGTATGTTATATTACTTGTAGAGCTATTATTATATGTGGTTTATTACCACAATCCTATCTTATAGTAGTTTCTTCATTCTTCCTTAAATTCTTTTATATATTTTTATTTTCTTATGAGCAGTGGGGATCAATATGGAAGCCGATTCATTCAACAAAAACTCGAAACAGCTACTGTTGATGAGAAAAATATGATTTATCAGGAAATTATGCCTCAAGCTCTTGCTCTGATGACTGATGTCTTTGGCAATTATGTGATTCAAAAAGTAATTAGTCCTCTCTGAACGATATTTGTTATTGTTTTCTGGTTCTAGTGCCTTTCTTTGCTTCTATATGCTCATCACGGGAGTACGTATGCAGTTCTTTGAGCATGGACTTGCAGTACAGAGAAGAGAATTGGCCAATAAGCTTTTTGGTCACATACTTACGCTGAGCCTTCAGATGTATGGTTGTCGGGTGATCCAGAAGGTACTGCTTATCTTAAGCTGGACTCACATATTATCTTCTGAACCCAATATCCTCTTTAAAACAATTTCATTCTACTTCAGTGCATTATCAATTGGATGCCTTACTAAAGAGTAGCTAAATTATTCTCCTCAAAAAGAAAATACATGAATAAAGCCCTGTTGAAGTTCAACTATTGCCCCTTCATAATGTGACTAACTGATGTTTGTAATACTCATTCTAATCATGTGATGAGATTGCATGATTTACTCATGGATGTCACATAAATATATGTATACTCAATTAATCAGGCAATTGAAGTAGTAGATCTGGACCAAAAGATTAAAATGGTCAAAGAGCTTGATGGACATATCATGCGCTGTGTACGCGATCAGAATGGTAACCATGTTATACAAAAGTGTATAGAATGTGTACCCGAAGAAGCAATCCATTTTATAGTTTCAACATTTTTTGATCAAGTTGTGACACTTTCAACTCACCCGTATGGGTGTCGTGTGATACAGGTGCTTTAAATTCTCTATTTCCTAAACTAAGATGAGCTAAATTTACACCTATTATCAATACTGACATGTTTTCCTTCTAACAGAGAGTTCTTGAGCACTGCAAGGATGAAAATACTCAGAGTAAAGTTATGGAGGAAATTCTAGGATCTGTTAGCATGTTGGCACAAGATCAGTATGGAAATTATGTCGTTCAGGTTCATGCTTCTAGCCAAACTCTTTTACGAAGTGTTATAGTTCACTTTAGTTTTAGATAGATTGTGATACTGTGCAATTTAAACTCTTTGATTTCATCTTTTGGAGTTCTTCACGAGGTGCAAAAAAGCTAAGTATTCTGAAAAAAAACAAGCCTGAAAAAAAGTGAGATATTTGATATTCTCTTGTTATTTGATTCTTCTCATCAGCATGTATTGGAGCATGGAAAACCTCATGAGCGTTCTGCAATTATTAAGGAATTGGCTGGTAAAATAGTTCAAATGAGTCAGCAGAAGTTTGCCTCTAACGTCGTCGAGAAATGCTTAACCTTTGGCGGTCCAACGGAGCGCCAGCTACTTGTCAGCGAAATGCTTGGCACTACGGATGAAAATGAGCCTCTTCAGGTTTGTGAACAATTATCTCCCATGCACTGCTTTAATTTCTCACAAATGCATACAAATGGCCCTGTCCAATTGATAGAAATGTGTATGCGAATTCCTACCAATCGTACATCTCCACACGACCTGATACTTCTCGCTATCATTGCTATTCCTAGCTTCTTATCTGTTATTGAATCTTATTCAGGCAATGATGAAAGATCAATTTGCAAACTATGTCGTCCAAAAAGTGCTCGAGACTTGTGATGACCAACAGCGTGAGTTGATTCTCTCTCGAATCAAAGTTCATCTCAATGCCCTGAAGAAATATACTTACGGGAAGCACATCGTTGCTCGTGTAGAGAAACTTGTCGCTGCTGGGGGTATATACCATTTGTTTTCACCAATCTCGAATGAATGCTATAATATTTCTGTCACTTAACAACACAGATCTAAGTCTTCTGTTTAATCTGTTGCAGAAAGGAGAATTGCAGCTCAGTCTTCTCCACACCCTTCTTTGGTGACCTAGGAAAGAAACCATGTACAGCTAACTGAAGCGATCGACGAACATGCGAGCTTCATCGTCTCTTTCCACTGTTTTCCGTTTTATCATCTAGAGCAGTAGCTCAACCTCAACCTCAACCTCTCTGTGAAGACAGGTATGAGCTGATTGACAATAAAGCAAGTTGTTTGTTTGTACTTTGGAAGGAAGCCTGTACATTTGTAGTTTTAAGCTGCTTTATACGTAGAAATCGATCAATTTCGTGGCACCCGATTGCCCCGGACGAGATAAAAGATGGCTGCCTGCCTATACTTAGTTTCTTTTTTCCTTTTCCTTAAGGGGATGTAAATGACTTTAAAAAATGTTGAGGTAGTTTTTCTTTTTTCTATATATTTTAGCGTGACTGTACAAAATGTTGCCATGTGAAGAAGAGCTGTTTATGTTTAGATTATTTGAGGCCATACTTTTCTTCTCATCTTTTTCTTCTCATCTTTTTCTTCTATCAGTTATTTCCGTTTCCTTCATCTCCTCATCCACTTTTAAAATTTTGGCCTATCAGTTTTAGGTTAGTGTCTATTTGGTCGTCGTAAAAAGAGATACTCTTAAGTTCTCGAGATTTGAAACATTGTTATAAATGGTTTTGTTCAACGAAAAAGTGACTCGAAACACATCAAGAAAATATTTAGTGAAATTGCGTAAAAGTAACAAACAATTGTTTTTGAAGAATTTAGATTCTCATTTTCTCGTACAACCATTTGGTTAATTGGATGTCTATGTAACGTGAGGGCATATGGTATAATGGATCAAGCCTACTCTTGATAGATATCGTTGTCTGCTTATCGTCGTCAGACTCACGTTTTAAAATGTGTTTGCTAGAGAGATGTGAAATGTCCTTGCTGACACACCGACAACGTGTTTGCTAGAGAGATGTGAATTGTCCTTGATGAGCACCGACGTCTAGCTCTTATACCTTTTGTAACAGTCAAAGCTTATAACTAACCGATATTGTCGGCTTTGGCTTGTTATATATCGTTTAACGTGCTAAAGCAAACCATATCAATTAGCAGTGATCTTGATAAACAATATCAAAGTTAGTGGTCTTGGCTTACTACAAAATCATGGGATAGTGTCTGTTGAAGTAAGGCTAAGTAGACAATATCATAGTAAGGCTAAGTAGACAAGGCTAAGTAGACAATATCGTAGTAAGGCTAAGTAGACAAGGCTAAGTAGACAATATCGTACAGTGTAAGATACTGGAGATACTGGTTGAAGTAAGGCTAAGTTGACAATACATTCTAGCGGTGAATTTGAACGGTTACACATAATTTCAACTTTAATGTTCGTTTTCCAAGCTCACAAATCAATGTTGACTACAACGCTGCTAGGGATGCATGTTTCTATTCATGCTATCCGCTTATCCATCATCTTGGAGATGTAAATGAAATTAAATTACAATATTACCCTTTATCCTTTAAATTAGCTTTTAGCTTTTAAGTAGAAAATTAGTTAAAACGTTAGGCTTATCCTAGCTGAGGTCATAGACTTTCCAAATTTAGAATGGTTGAATTATTCATAGTTCGAGGTAGATGATTAAAAATCAAACAACATTTAATCGAGTTAATCTGGATGGATCATTCCAATTCCAACGAGAAAATTTAGGATGCCCTAACTCAGCAAATTAAACTGAATTTATGGAAAATTAAACAAGCAAGAATAAGATCAACAGCTGTTGATAACATCAGTCCTCTTCTTGTTCAACCTTCTGGCCGAATCCCCTGGGTCCAGTTTTGGCCTTCACCTTCACCTTCTTCTTCTTCCCGCTCTTCTTGTTAGCCGCCTCCTCTTTCTCAAACTTTTCCTTCTCCCTCTTCTGCAAGAAATCCGTCACAGCAATGTAGATTACCTGAAACTCGAAATACACTTCCCAATGTAAAAACCCTAACCAAGCCGATAAAATCAACAGCTATTCGAACAAAATTATTCACTGGAGAAATTCAACTTCGAAATTCGAATCCGAGCACTGATTTTACCCCGATTGTGAGAACAGATAGACCGACGAATGCGACAAACAGAAGAACAGAGATTATGGTGGATACGCCGTCGTCACCAGTCGATGCTATCTCCTGTGATTTCTCCACCAGCGCGGCGGATTCCGAGGCCAAGGTTTCTTCAGAAATGGCATGGAGCCTACGGATTGAGCCTCGTCTTGGACGATTTTGGAGGAGAACGAGAGCTGCCGGTCGGCGAGAGAGATTGAAGGATGAAGCAAAGGATGCAGATGAGGAACGGAGAGAAGGAAGCTTGTAG

mRNA sequence

CCCTAAAAGGGTTCTCGTTTGGAGCAATAGCCGCCGGACTGATCTCAGCTGTCCCCGCCTTCTTCTCTATATCTCAAATCCTTTGCTTGATCTCATTTCACCACCGGGAACCTAATTTTTTTCGTTTCTTTCTTTCACTTTGATTTTGTCTACCTGTTCTTCCCATCGCTCTTCTTGCCATTTGTAGTTCGATATATTTGCTACTGTTTATTACATGAAAATTATGTCGGGGAATTCTCTGTCTTGGTAGAATTTAGGGTGTAGTGGGAACTAAATGATTTTTAGGACACTTTTTTGGGGCTTGGAATTGGTGGTTGGGTTGTAAAGGTTCCGGATAGGGAATTGGTGGAACGGATGGAAATTTTGGTTTTGATCAGTTTAGAATGACTCCTTTTGAGCTGTAAATAGTGGTTTCTTGTTGTAGGATTTTTTTTTTTTTTTTTTTTAGGCGTAGCTTTTTGTTGTTGCGGTGAGGCAGTGATCAGATAGGGTTAGAAGGGTAAGACCGATGTTTGGTGGCAACGATGGATCGTTTGGTGATGAATTAGAGACGGAGATAGGGTTATTGCTTCGTGAACAGCGTCGGCAAGAGACCGATGATCGAGAGCGGGAGCTGAATTTGTATAGAAGTGGATCAGCTCCACCGACTGTTGAAGGCTCTTTAAGTGCGGTGGGTGGTCTGTTTGGTGGGGTTCCTGGTTCTGCTAATGCCTTTGCGGAGTTATCGGGTTCGAATAATGGTAATGGTTTTGTGTCAGAGGAGCTGCTTAGGTCTGATCCAGCTTACTCATCATACTATTACTCGAATGTGAACCTTAATCCTCGGCTTCCGCCTCCATTGATTTCGAAGGAGGATTGGAAGTCTGCGCAGAGATTGAAAGGGGCTAATTTGGGGTTGGGAGGCATCGGAGAGACGAGGCGATCAAATGTTGGGACGGATAGTGCCGCCAGATCCTTGTTTTCTATGCCTCCTGGGTTTAATGCTAGGAAACAAGCATCTGAGGTCGAGTTGGATAAAGGGCGTGGCGCTACCGAGTGGGGTGGTGACGGTTTGATTGGTTTGCCTGGTTTAGGACTTGGAACCAAACAGAAGAGTCTAGCTGAAATCTTTCAGGATGACATGGGTCGCACAACTCCTGTTACTGGGCTGCCATCCCGTCCGACCAGCCGCAATGCCTTTGAGGAAAATGTTGAGACAATGAGTGCCACTGATGAGTTGGCCAATTTGCGACATGACTTGATGGTTTCTGAAGTTATGCGATCTGGTGCAAATGGTCAGAGCTCTGGAGCACCTTCTTCATACACTTATGCCGCAGCCGTGGGTGGTTCATTGTCAAGAAGCAATACGCCCGATCCCCAGCTTGTTGCAAGGGCGCCTAGTCCTTGTCTTACCCCCATTGGAGGCGGGAGAGTTGGAACTGCTGAAAAGAGGAACATTGCAAGCCCAAAATCATTTAATGGCGTCTCATCTGGAATCAACGAGTCTTCAGAACTTGTATCAGCTTTATCTGGTATGAACTTGGCATCAGATGATGCCATAAATGAAGAGGGTCATTTGCTATCTCAAATAAAACAAGATAGTAATAACCAACAGGGCTATGCATATGGCATGCAAGGAGGTCAGAATCATATTAAACAACAGTCATATGCGAAGAAGAACGAGTCCGGGGGTGCACCCAGGTCTTCATTCTCAGACTTGAATGACAACAATGGAGGGGGACCCAACTTCTCCAGAGATAGGCATGCTGAACTGCAACACTCTTCTGTTCCTCCTGCTAGCTTGTTTTTGAAAGGTGGTCAGCATGCTTCATCTCATAACAATGGAGCTCAGTATCAGCATATAGATGGCACAAATTTGACATATCAGAACTTTGGCCTGAGTGGGTACTCGATTAGTCCACCTTTGGCATCTATGATGCCCGGTCAACTCGGCACTGCTAATTTACCAACATTGTTTGAAAATGTTGCCTCAGCTTCAGCTTTGGGAGCCTCTGGTTTGGAGTCACGGGTTCTTGGGGGAGGGTTAGCTTCTGCAAACTTGGCTTCTTCTGCTGCAGATTCACATATTCTTGGTAAATTGGGAGGTCAAATGAGTGGCAATGCTCTTCAGGCATCCTTTGTCGATCCCATTTATCTTCAATACTTGAGGACGCCTGAATATGCTTCAGCACAACTCGGTGCTTTAAATGATCCTTCTCTTGATAGAAATTATCTGGGAAATTCATATATGAACCAGCTAGAACTGCAGAAAGCCTACGGGGCTCTTCTATCACCTCAAAAATCACAATATAGTGTCCCATTCAGTGGTAAATCTGGTGTTTCAAATCATCATGGTTATTTTGGAAATCCAGCTTTTGGAGTTCACATGTCTTATCCTGGAAGTCCTATGGCAAATCCTGTCCTTTCTAACTCCCCTGTAGGACCTGGTAGTCCTGTCAGGCACAATGACATTCATTTGCGCTATCCTTCTGGTACAAGGAACTTAGGTGGCGTTATGAGTCCTTGGCATCTGGAGGTTGGAAATATCAACGAAAGCTTCTCATCCTCTCTCTTAGAGGAGTTCAAGAGCAATAAGACAAAATGTTTTGAACTTTCTGAAATTGCCGGTCATGTGTTCGAATTTAGTGGGGATCAATATGGAAGCCGATTCATTCAACAAAAACTCGAAACAGCTACTGTTGATGAGAAAAATATGATTTATCAGGAAATTATGCCTCAAGCTCTTGCTCTGATGACTGATGTCTTTGGCAATTATGTGATTCAAAAATTCTTTGAGCATGGACTTGCAGTACAGAGAAGAGAATTGGCCAATAAGCTTTTTGGTCACATACTTACGCTGAGCCTTCAGATGTATGGTTGTCGGGTGATCCAGAAGGCAATTGAAGTAGTAGATCTGGACCAAAAGATTAAAATGGTCAAAGAGCTTGATGGACATATCATGCGCTGTGTACGCGATCAGAATGGTAACCATGTTATACAAAAGTGTATAGAATGTGTACCCGAAGAAGCAATCCATTTTATAGTTTCAACATTTTTTGATCAAGTTGTGACACTTTCAACTCACCCGTATGGGTGTCGTGTGATACAGAGAGTTCTTGAGCACTGCAAGGATGAAAATACTCAGAGTAAAGTTATGGAGGAAATTCTAGGATCTGTTAGCATGTTGGCACAAGATCAGTATGGAAATTATGTCGTTCAGCATGTATTGGAGCATGGAAAACCTCATGAGCGTTCTGCAATTATTAAGGAATTGGCTGGTAAAATAGTTCAAATGAGTCAGCAGAAGTTTGCCTCTAACGTCGTCGAGAAATGCTTAACCTTTGGCGGTCCAACGGAGCGCCAGCTACTTGTCAGCGAAATGCTTGGCACTACGGATGAAAATGAGCCTCTTCAGGCAATGATGAAAGATCAATTTGCAAACTATGTCGTCCAAAAAGTGCTCGAGACTTGTGATGACCAACAGCGTGAGTTGATTCTCTCTCGAATCAAAGTTCATCTCAATGCCCTGAAGAAATATACTTACGGGAAGCACATCGTTGCTCGTGTAGAGAAACTTGTCGCTGCTGGGGAAAGGAGAATTGCAGCTCAGTCTTCTCCACACCCTTCTTTGCCGCCTCCTCTTTCTCAAACTTTTCCTTCTCCCTCTTCTGCAAGAAATCCGTCACAGCAATGTAGATTACCTGAAACTCGAAATACACTTCCCAATGTAAAAACCCTAACCAAGCCGATAAAATCAACAGCTATTCGAACAAAATTATTCACTGGAGAAATTCAACTTCGAAATTCGAATCCGAGCACTGATTTTACCCCGATTGTGAGAACAGATAGACCGACGAATGCGACAAACAGAAGAACAGAGATTATGGTGGATACGCCGTCGTCACCAGTCGATGCTATCTCCTGTGATTTCTCCACCAGCGCGGCGGATTCCGAGGCCAAGGTTTCTTCAGAAATGGCATGGAGCCTACGGATTGAGCCTCGTCTTGGACGATTTTGGAGGAGAACGAGAGCTGCCGGTCGGCGAGAGAGATTGAAGGATGAAGCAAAGGATGCAGATGAGGAACGGAGAGAAGGAAGCTTGTAG

Coding sequence (CDS)

ATGTTTGGTGGCAACGATGGATCGTTTGGTGATGAATTAGAGACGGAGATAGGGTTATTGCTTCGTGAACAGCGTCGGCAAGAGACCGATGATCGAGAGCGGGAGCTGAATTTGTATAGAAGTGGATCAGCTCCACCGACTGTTGAAGGCTCTTTAAGTGCGGTGGGTGGTCTGTTTGGTGGGGTTCCTGGTTCTGCTAATGCCTTTGCGGAGTTATCGGGTTCGAATAATGGTAATGGTTTTGTGTCAGAGGAGCTGCTTAGGTCTGATCCAGCTTACTCATCATACTATTACTCGAATGTGAACCTTAATCCTCGGCTTCCGCCTCCATTGATTTCGAAGGAGGATTGGAAGTCTGCGCAGAGATTGAAAGGGGCTAATTTGGGGTTGGGAGGCATCGGAGAGACGAGGCGATCAAATGTTGGGACGGATAGTGCCGCCAGATCCTTGTTTTCTATGCCTCCTGGGTTTAATGCTAGGAAACAAGCATCTGAGGTCGAGTTGGATAAAGGGCGTGGCGCTACCGAGTGGGGTGGTGACGGTTTGATTGGTTTGCCTGGTTTAGGACTTGGAACCAAACAGAAGAGTCTAGCTGAAATCTTTCAGGATGACATGGGTCGCACAACTCCTGTTACTGGGCTGCCATCCCGTCCGACCAGCCGCAATGCCTTTGAGGAAAATGTTGAGACAATGAGTGCCACTGATGAGTTGGCCAATTTGCGACATGACTTGATGGTTTCTGAAGTTATGCGATCTGGTGCAAATGGTCAGAGCTCTGGAGCACCTTCTTCATACACTTATGCCGCAGCCGTGGGTGGTTCATTGTCAAGAAGCAATACGCCCGATCCCCAGCTTGTTGCAAGGGCGCCTAGTCCTTGTCTTACCCCCATTGGAGGCGGGAGAGTTGGAACTGCTGAAAAGAGGAACATTGCAAGCCCAAAATCATTTAATGGCGTCTCATCTGGAATCAACGAGTCTTCAGAACTTGTATCAGCTTTATCTGGTATGAACTTGGCATCAGATGATGCCATAAATGAAGAGGGTCATTTGCTATCTCAAATAAAACAAGATAGTAATAACCAACAGGGCTATGCATATGGCATGCAAGGAGGTCAGAATCATATTAAACAACAGTCATATGCGAAGAAGAACGAGTCCGGGGGTGCACCCAGGTCTTCATTCTCAGACTTGAATGACAACAATGGAGGGGGACCCAACTTCTCCAGAGATAGGCATGCTGAACTGCAACACTCTTCTGTTCCTCCTGCTAGCTTGTTTTTGAAAGGTGGTCAGCATGCTTCATCTCATAACAATGGAGCTCAGTATCAGCATATAGATGGCACAAATTTGACATATCAGAACTTTGGCCTGAGTGGGTACTCGATTAGTCCACCTTTGGCATCTATGATGCCCGGTCAACTCGGCACTGCTAATTTACCAACATTGTTTGAAAATGTTGCCTCAGCTTCAGCTTTGGGAGCCTCTGGTTTGGAGTCACGGGTTCTTGGGGGAGGGTTAGCTTCTGCAAACTTGGCTTCTTCTGCTGCAGATTCACATATTCTTGGTAAATTGGGAGGTCAAATGAGTGGCAATGCTCTTCAGGCATCCTTTGTCGATCCCATTTATCTTCAATACTTGAGGACGCCTGAATATGCTTCAGCACAACTCGGTGCTTTAAATGATCCTTCTCTTGATAGAAATTATCTGGGAAATTCATATATGAACCAGCTAGAACTGCAGAAAGCCTACGGGGCTCTTCTATCACCTCAAAAATCACAATATAGTGTCCCATTCAGTGGTAAATCTGGTGTTTCAAATCATCATGGTTATTTTGGAAATCCAGCTTTTGGAGTTCACATGTCTTATCCTGGAAGTCCTATGGCAAATCCTGTCCTTTCTAACTCCCCTGTAGGACCTGGTAGTCCTGTCAGGCACAATGACATTCATTTGCGCTATCCTTCTGGTACAAGGAACTTAGGTGGCGTTATGAGTCCTTGGCATCTGGAGGTTGGAAATATCAACGAAAGCTTCTCATCCTCTCTCTTAGAGGAGTTCAAGAGCAATAAGACAAAATGTTTTGAACTTTCTGAAATTGCCGGTCATGTGTTCGAATTTAGTGGGGATCAATATGGAAGCCGATTCATTCAACAAAAACTCGAAACAGCTACTGTTGATGAGAAAAATATGATTTATCAGGAAATTATGCCTCAAGCTCTTGCTCTGATGACTGATGTCTTTGGCAATTATGTGATTCAAAAATTCTTTGAGCATGGACTTGCAGTACAGAGAAGAGAATTGGCCAATAAGCTTTTTGGTCACATACTTACGCTGAGCCTTCAGATGTATGGTTGTCGGGTGATCCAGAAGGCAATTGAAGTAGTAGATCTGGACCAAAAGATTAAAATGGTCAAAGAGCTTGATGGACATATCATGCGCTGTGTACGCGATCAGAATGGTAACCATGTTATACAAAAGTGTATAGAATGTGTACCCGAAGAAGCAATCCATTTTATAGTTTCAACATTTTTTGATCAAGTTGTGACACTTTCAACTCACCCGTATGGGTGTCGTGTGATACAGAGAGTTCTTGAGCACTGCAAGGATGAAAATACTCAGAGTAAAGTTATGGAGGAAATTCTAGGATCTGTTAGCATGTTGGCACAAGATCAGTATGGAAATTATGTCGTTCAGCATGTATTGGAGCATGGAAAACCTCATGAGCGTTCTGCAATTATTAAGGAATTGGCTGGTAAAATAGTTCAAATGAGTCAGCAGAAGTTTGCCTCTAACGTCGTCGAGAAATGCTTAACCTTTGGCGGTCCAACGGAGCGCCAGCTACTTGTCAGCGAAATGCTTGGCACTACGGATGAAAATGAGCCTCTTCAGGCAATGATGAAAGATCAATTTGCAAACTATGTCGTCCAAAAAGTGCTCGAGACTTGTGATGACCAACAGCGTGAGTTGATTCTCTCTCGAATCAAAGTTCATCTCAATGCCCTGAAGAAATATACTTACGGGAAGCACATCGTTGCTCGTGTAGAGAAACTTGTCGCTGCTGGGGAAAGGAGAATTGCAGCTCAGTCTTCTCCACACCCTTCTTTGCCGCCTCCTCTTTCTCAAACTTTTCCTTCTCCCTCTTCTGCAAGAAATCCGTCACAGCAATGTAGATTACCTGAAACTCGAAATACACTTCCCAATGTAAAAACCCTAACCAAGCCGATAAAATCAACAGCTATTCGAACAAAATTATTCACTGGAGAAATTCAACTTCGAAATTCGAATCCGAGCACTGATTTTACCCCGATTGTGAGAACAGATAGACCGACGAATGCGACAAACAGAAGAACAGAGATTATGGTGGATACGCCGTCGTCACCAGTCGATGCTATCTCCTGTGATTTCTCCACCAGCGCGGCGGATTCCGAGGCCAAGGTTTCTTCAGAAATGGCATGGAGCCTACGGATTGAGCCTCGTCTTGGACGATTTTGGAGGAGAACGAGAGCTGCCGGTCGGCGAGAGAGATTGAAGGATGAAGCAAAGGATGCAGATGAGGAACGGAGAGAAGGAAGCTTGTAG

Protein sequence

MFGGNDGSFGDELETEIGLLLREQRRQETDDRERELNLYRSGSAPPTVEGSLSAVGGLFGGVPGSANAFAELSGSNNGNGFVSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKSAQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDKGRGATEWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELANLRHDLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIGGGRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQIKQDSNNQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAELQHSSVPPASLFLKGGQHASSHNNGAQYQHIDGTNLTYQNFGLSGYSISPPLASMMPGQLGTANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQMSGNALQASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGALLSPQKSQYSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRHNDIHLRYPSGTRNLGGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEFSGDQYGSRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRELANKLFGHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQKCIECVPEEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSSPHPSLPPPLSQTFPSPSSARNPSQQCRLPETRNTLPNVKTLTKPIKSTAIRTKLFTGEIQLRNSNPSTDFTPIVRTDRPTNATNRRTEIMVDTPSSPVDAISCDFSTSAADSEAKVSSEMAWSLRIEPRLGRFWRRTRAAGRRERLKDEAKDADEERREGSL

Homology

[Close]

BLAST of CmaCh02G007880 vs. ExPASy Swiss-Prot
Match: Q9ZW06 (Pumilio homolog 2 OS=Arabidopsis thaliana OX=3702 GN=APUM2 PE=1 SV=1)

HSP 1 Score: 1139.0 bits (2945), Expect = 0.0e+00
Identity = 633/1043 (60.69%), Postives = 758/1043 (72.67%), Query Frame = 0


Query: 3    GGNDGSFGDELETEIGLLLREQRRQ--ETDDRERELNLYRSGSAPPTVEGSLSAVGGLFG 62
            G  D SFGD+ E EIG+LL EQ+R+  E D+ ERELNLYRSGSAPPTV+GS+SA GGLF 
Sbjct: 13   GNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLYRSGSAPPTVDGSVSAAGGLFS 72

Query: 63   GVPGSANAFAELSGSNNGNGF-VSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKS 122
            G  G    F E  G N GNGF   +E  R DPAY SYYY+N+ LNPRLPPPL+S+ED + 
Sbjct: 73   G--GGGAPFLEFGGGNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRV 132

Query: 123  AQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDK-GRGATEWG 182
            AQRLKG++  LGG+G+ R+ N      ++SLFSMPPGF+ RKQ  E E++K    ++EW 
Sbjct: 133  AQRLKGSSNVLGGVGDRRKVN-----DSQSLFSMPPGFDQRKQ-HEFEVEKTSASSSEWD 192

Query: 183  GDGLIGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELA 242
             +GLIGLPGLG+G KQKS A+IFQ DMG   PVT  PSRP SRN F+ENV++ +      
Sbjct: 193  ANGLIGLPGLGIGGKQKSFADIFQADMGHGHPVTKQPSRPASRNTFDENVDSKN------ 252

Query: 243  NLRHDLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIG 302
            NL           S +  Q  GAPS Y+YAA +G SLSR+ TPDPQ +AR PSPCLTPIG
Sbjct: 253  NL-----------SPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIG 312

Query: 303  GGRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQIKQDS 362
             GRV + +KRN ++   FNG   G+NESS+LV+ALSGMNL+    ++E G    Q +QD 
Sbjct: 313  SGRVSSNDKRNTSNQSPFNG---GLNESSDLVNALSGMNLSGSGGLDERG----QAEQDV 372

Query: 363  NNQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAELQHS 422
               + Y +G+QGG N + Q  +  K++                         R+++L+  
Sbjct: 373  EKVRNYMFGLQGGHNEVNQHGFPNKSDQAQKATGLL----------------RNSQLR-- 432

Query: 423  SVPPASLFLKGGQHASSHNNG----AQYQHIDGTNLTYQNFGLSGYSISPPLASMMPGQL 482
                       G   S++N+G     QYQH+D  N    N+GL     +P +ASMM  QL
Sbjct: 433  -----------GAQGSTYNDGGGVATQYQHLDSPNYCLNNYGL-----NPAVASMMANQL 492

Query: 483  GTANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQM--SGNA 542
            GT N   ++EN ++ASA+G SG++SR+ GGG  S+    + ++S  LG+   +M   G  
Sbjct: 493  GTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSS--GQNLSESRNLGRFSNRMMGGGTG 552

Query: 543  LQASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGALLSPQKS 602
            LQ+   DP+Y QY       +  L  LNDPS+D N++GNSYMN LELQ+AY   L  QKS
Sbjct: 553  LQSHMADPMYHQY-------ADSLDLLNDPSMDVNFMGNSYMNMLELQRAY---LGAQKS 612

Query: 603  QYSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRHNDIHLRY 662
            QY VP+  KSG  N H  +G+P FG   SYPGSP+A+ +L NS V P SP+R  ++++RY
Sbjct: 613  QYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLLPNSLVSPCSPMRRGEVNMRY 672

Query: 663  PSGTRN-LGGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEFSGDQYG 722
            PS TRN  GGVM  WH++  +++E F SS+LEEFKSNKT+ FEL+EIAGHV EFS DQYG
Sbjct: 673  PSATRNYAGGVMGSWHMD-ASLDEGFGSSMLEEFKSNKTRGFELAEIAGHVVEFSSDQYG 732

Query: 723  SRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRELANKLF 782
            SRFIQQKLETAT DEKNM+Y+EIMP ALALMTDVFGNYVIQKFFEHGL  QRRELA+KLF
Sbjct: 733  SRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPPQRRELADKLF 792

Query: 783  GHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQKCIECVP 842
             ++L LSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGH+MRCVRDQNGNHV+QKCIECVP
Sbjct: 793  DNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVP 852

Query: 843  EEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSMLAQDQY 902
            EE I FI+STFF  VVTLSTHPYGCRVIQRVLEHC D +TQSKVM+EI+ ++SMLAQDQY
Sbjct: 853  EENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQY 912

Query: 903  GNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEM 962
            GNYV+QHVLEHGKP ER+ IIKELAGKIVQMSQQKFASNVVEKCLTFGGP ER+ LV+EM
Sbjct: 913  GNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEM 971

Query: 963  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVA 1022
            LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL RIKVHLNALKKYTYGKHIVA
Sbjct: 973  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVA 971

Query: 1023 RVEKLVAAGERRIAAQSSPHPSL 1035
            RVEKLVAAGERR+A QS   P +
Sbjct: 1033 RVEKLVAAGERRMALQSLTQPQM 971

[Close]

BLAST of CmaCh02G007880 vs. ExPASy Swiss-Prot
Match: Q9ZW07 (Pumilio homolog 1 OS=Arabidopsis thaliana OX=3702 GN=APUM1 PE=1 SV=1)

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 629/1043 (60.31%), Postives = 752/1043 (72.10%), Query Frame = 0


Query: 3    GGNDGSFGDELETEIGLLLREQRRQ--ETDDRERELNLYRSGSAPPTVEGSLSAVGGLFG 62
            G  D SFGD+ E EIG+LL EQ+R+  E D+ ERELNL+RSGSAPPTV+GS+SA GGLF 
Sbjct: 13   GNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLFRSGSAPPTVDGSVSAAGGLFS 72

Query: 63   GVPGSANAFAELSGSNNGNGF-VSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKS 122
            G  G    F E  G N GNGF   +E  R DPAY SYYY+N+ LNPRLPPPL+S+ED + 
Sbjct: 73   G--GGGAPFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRV 132

Query: 123  AQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDKGRGATEWGG 182
            AQRLKG+N  LGG+G+ R+ N       RSLFSMPPGF   K         G  A+EW  
Sbjct: 133  AQRLKGSNNVLGGVGDRRKVNDN-----RSLFSMPPGFEGEK--------TGASASEWDA 192

Query: 183  DGLIGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELAN 242
            +GLIGLPGLGLG KQKS A+IFQ DMG   PV   PSRP SRN F+ENV++ +      N
Sbjct: 193  NGLIGLPGLGLGGKQKSFADIFQADMGHGHPVAQQPSRPASRNTFDENVDSNN------N 252

Query: 243  LRHDLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIGG 302
            L           S +  Q  GAPS Y+YAA +G SLSR+ TPDPQ +AR PSPCLTPIG 
Sbjct: 253  L-----------SPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGS 312

Query: 303  GRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQIKQDSN 362
            GR+ + +KRN ++   FNGV+SG+NESS+LV+ALSG+NL+    +++     SQ +QD  
Sbjct: 313  GRMSSNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSCSVGLDDR----SQAEQDVE 372

Query: 363  NQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAELQHSS 422
              + Y +G+QGG N + Q  +  K++       S                 R+++L+   
Sbjct: 373  KVRNYMFGLQGGHNEVNQHEFPNKSDQAHKATGSL----------------RNSQLR--- 432

Query: 423  VPPASLFLKGGQHASSHNNGA----QYQHIDGTNLTYQNFGLSGYSISPPLASMMPGQLG 482
                      G H S++N G      YQ +D       N+ L+ Y+++P +ASMM  QLG
Sbjct: 433  ----------GPHGSAYNGGVGLANPYQQLDS-----PNYCLNNYALNPAVASMMANQLG 492

Query: 483  TANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQMSGN--AL 542
              N   +++NV   SALG SG++SR  G G  S+    + ++S  LG+   +M G    L
Sbjct: 493  NNNFAPMYDNV---SALGFSGMDSRHHGRGFVSS--GQNLSESRNLGRFSNRMMGGGAGL 552

Query: 543  QASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYL-GNSYMNQLELQKAYGALLSPQKS 602
            Q+  VDP+Y QY       +  L  LNDPS+DRN++ G+SYM+ LELQ+AY   L  QKS
Sbjct: 553  QSHMVDPMYNQY-------ADSLDLLNDPSMDRNFMGGSSYMDMLELQRAY---LGAQKS 612

Query: 603  QYSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRHNDIHLRY 662
            QY VP+  KSG  N H Y+G+P FG +MSYPGSP+A+  + NS + P SP+R +++++R+
Sbjct: 613  QYGVPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRDEVNMRF 672

Query: 663  PSGTRNL-GGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEFSGDQYG 722
            PS TRN  GG+M  WH++  + +E F SS+LEEFKSNKT+ FELSEIAGHV EFS DQYG
Sbjct: 673  PSATRNYSGGLMGSWHMD-ASFDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYG 732

Query: 723  SRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRELANKLF 782
            SRFIQQKLETAT DEKNM+Y+EIMPQAL LMTDVFGNYVIQKFFEHGL  QRRELA KLF
Sbjct: 733  SRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQRRELAEKLF 792

Query: 783  GHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQKCIECVP 842
             H+L LSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGH+MRCVRDQNGNHV+QKCIECVP
Sbjct: 793  DHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVP 852

Query: 843  EEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSMLAQDQY 902
            EE I FI+STFF  VVTLSTHPYGCRVIQRVLEHC D +TQSKVMEEIL +VSMLAQDQY
Sbjct: 853  EENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQY 912

Query: 903  GNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEM 962
            GNYVVQHVLEHGKP ER+ IIKELAGKIVQMSQQKFASNVVEKCLTFGGP ER+LLV+EM
Sbjct: 913  GNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEM 967

Query: 963  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVA 1022
            LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL+RIKVHL ALKKYTYGKH+VA
Sbjct: 973  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVA 967

Query: 1023 RVEKLVAAGERRIAAQSSPHPSL 1035
            R+EKLVAAGERR+A QS   P +
Sbjct: 1033 RIEKLVAAGERRMALQSLTQPQM 967

[Close]

BLAST of CmaCh02G007880 vs. ExPASy Swiss-Prot
Match: Q9ZW02 (Pumilio homolog 3 OS=Arabidopsis thaliana OX=3702 GN=APUM3 PE=1 SV=1)

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 623/1040 (59.90%), Postives = 747/1040 (71.83%), Query Frame = 0


Query: 3    GGNDGSFGDELETEIGLLLREQRRQ--ETDDRERELNLYRSGSAPPTVEGSLSAVGGLFG 62
            G  D SFGD+ E EIG+LL EQ+R+  E D+ ERELNLYRSGSAPPTV+GSLSA GGLF 
Sbjct: 14   GNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLYRSGSAPPTVDGSLSAAGGLFS 73

Query: 63   GVPGSANAFAELSGSNNGNGF-VSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKS 122
            G  G   +F E  G N GNGF   +E  R DPAY SYYY+N+ LNPRLPPPL+S+ED + 
Sbjct: 74   G--GGGASFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRV 133

Query: 123  AQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDKGRGATEWGG 182
            AQRLKG+N  LGG+G+ R+ N      +RSLFSMPPGF A K         G  A+EW  
Sbjct: 134  AQRLKGSNNVLGGVGDRRKVN-----DSRSLFSMPPGFEAGK--------PGASASEWDA 193

Query: 183  DGLIGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELAN 242
            +GLI   GLGLG KQKS A+IFQ DMG   PV   PSRP SRN F+ENV++ +      N
Sbjct: 194  NGLI---GLGLGGKQKSFADIFQADMGH--PVVQQPSRPASRNTFDENVDSNN------N 253

Query: 243  LRHDLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIGG 302
            L           S +  Q  GAPS Y YAA +G SLSR+ TPDPQ +AR PSPCLTPIG 
Sbjct: 254  L-----------SPSASQGIGAPSPYCYAAVLGSSLSRNGTPDPQGIARVPSPCLTPIGS 313

Query: 303  GRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQIKQDSN 362
            GRV + +KRN ++   FNGV+SG+NESS+LV+ALSG+NL+    ++E G    Q +QD  
Sbjct: 314  GRVSSNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSGTGGLDERG----QAEQDVE 373

Query: 363  NQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAELQHSS 422
              + Y +G+Q G N +    +  +++      S                  R+++++   
Sbjct: 374  KVRNYMFGLQDGHNEVNPHGFPNRSDQARGTASC-----------------RNSQMR--- 433

Query: 423  VPPASLFLKGGQHASSHNNGA----QYQHIDGTNLTYQNFGLSGYSISPPLASMMPGQLG 482
                      G   S++N+G+     YQH D  N          Y+++P +ASMM  QLG
Sbjct: 434  ----------GSQGSAYNSGSGVANPYQHHDSPNY---------YALNPAVASMMANQLG 493

Query: 483  TANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQM--SGNAL 542
            T N   ++EN  +++ LG S ++SR+ GG   S+    + ++S  +G++G +M   G   
Sbjct: 494  TNNYSPMYEN--ASATLGYSAMDSRLHGGSFVSS--GQNLSESRNIGRVGNRMMEGGTGH 553

Query: 543  QASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGALLSPQKSQ 602
             +   DP+Y QY R  E A +    LNDPS+DRNY GNSYMN LE+Q+AY   L  QKSQ
Sbjct: 554  PSHLADPMYHQYARFSENADS-FDLLNDPSMDRNY-GNSYMNMLEIQRAY---LGSQKSQ 613

Query: 603  YSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRHNDIHLRYP 662
            Y +P+  KSG  N H Y+G+P FG +MSYPGSP+A+  + NS + P SP+R  ++++RYP
Sbjct: 614  YGLPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEVNMRYP 673

Query: 663  SGTRN-LGGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEFSGDQYGS 722
            + TRN  GGVM  WH++  +++E F SS+LEEFKSNKT+ FELSEIAGHV EFS DQYGS
Sbjct: 674  AATRNYTGGVMGSWHMD-ASLDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYGS 733

Query: 723  RFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRELANKLFG 782
            RFIQQKLETAT DEKNM+Y+EIMP+ALALMTDVFGNYVIQKFFEHGL  QRREL  KL  
Sbjct: 734  RFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPPQRRELGEKLID 793

Query: 783  HILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQKCIECVPE 842
            ++L LSLQMYGCRVIQKAIEVVDLDQKI+MVKELDGH+MRCVRDQNGNHV+QKCIECVPE
Sbjct: 794  NVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCIECVPE 853

Query: 843  EAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSMLAQDQYG 902
            E I FI+STFF  VVTLSTHPYGCRVIQRVLEHC + +TQSKVMEEIL +VSML QDQYG
Sbjct: 854  ENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYG 913

Query: 903  NYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEML 962
            NYVVQHVLEHGKP ER+ IIKELAGKIVQMSQQKFASNVVEKCLTFGGP ER+LLV+EML
Sbjct: 914  NYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEML 961

Query: 963  GTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVAR 1022
            GTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL+RIKVHLNALKKYTYGKHIVAR
Sbjct: 974  GTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVAR 961

Query: 1023 VEKLVAAGERRIAAQSSPHP 1033
            VEKLVAAGERR+A QS P P
Sbjct: 1034 VEKLVAAGERRMALQSLPQP 961

[Close]

BLAST of CmaCh02G007880 vs. ExPASy Swiss-Prot
Match: Q9SS47 (Pumilio homolog 4 OS=Arabidopsis thaliana OX=3702 GN=APUM4 PE=1 SV=2)

HSP 1 Score: 669.8 bits (1727), Expect = 5.5e-191
Identity = 449/1044 (43.01%), Postives = 612/1044 (58.62%), Query Frame = 0


Query: 4    GNDGSFGDELETEIGLLLREQRRQET--DDRERELNLYRSGSAPPTVEGSLSAVGGLFGG 63
            G++    D  + E+  LL++ R Q++   +RER+++++RSGSAPPTVEG L A+   +  
Sbjct: 19   GSNVDLEDRFQRELESLLQQHRNQQSFGRERERDIDVHRSGSAPPTVEGLLRAMDNQYLN 78

Query: 64   VPGSANA-FAELSGSNNGNG--FVSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWK 123
               S +     +S     NG   +S++ LR  P Y SYYYSN + NPRLPPPL+S+EDW+
Sbjct: 79   NNNSDHRDVGNISSITTSNGVELLSDDELRWHPEYLSYYYSNEHSNPRLPPPLLSREDWR 138

Query: 124  SAQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEV-----ELDKGRG 183
             AQR   +      +GE R+  V  D+++ SLFS+ PG    +  +++      + +GR 
Sbjct: 139  VAQRFHNSESVFDPVGEWRKKTVEVDNSS-SLFSVQPGVPVEQAENDLMELRNAVAQGRS 198

Query: 184  ----ATEWGGDGLIGLPGL-GLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENV 243
                  + G + LIGL G  GLG ++KS A+I Q+ + R   +    SRP S N F +  
Sbjct: 199  QKVQRLDQGREDLIGLSGYSGLGPRRKSFADILQEGLERDAALGSQLSRPASCNTFRD-- 258

Query: 244  ETMSATDELANLRHDLMVSEV-MRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVA 303
              M     L+N       S +      +  +  +P++    + +   + R+ TPD  LV 
Sbjct: 259  --MKDAAVLSNFSAGGFDSPLAFHDSLHSTAKNSPNT-MLGSTMSSPVPRNRTPDSHLVG 318

Query: 304  RAPSPCLTPIGGGRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEE 363
            R+ +  L PI G RVG  EK+N       N  S     ++++   LS +N++    + +E
Sbjct: 319  RSTASGLPPI-GTRVGPVEKKNTFGTAIQNCES---YTAADVADTLSRLNMSEMSQV-KE 378

Query: 364  GHLLSQIKQDSNNQQG-YAYGMQGGQNHIKQQSYAK-KNESGGAPRSSFSDLNDNNGGGP 423
             H+ SQ++ +  NQ     Y   G +  ++QQ+ A+ K+    A     S    + G   
Sbjct: 379  NHMQSQLQVELENQSDVMRYIPNGHKKALRQQNTAETKDHLFSANYGGMSGYGASLGAST 438

Query: 424  NFSRDRHAELQHSSVPPASLFLKGGQHASSHNNGAQYQHIDGTNLTYQNFGLSGYSISPP 483
              S  +   +   +   ASL+     H+   + G    +I   N+   +F  +G      
Sbjct: 439  VGSHGQ-VNIPKRTSSSASLY-STSDHSRLGSVGLSDVNIRNGNINGTDFSTAG------ 498

Query: 484  LASMMPGQLGTANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLG 543
                  G +    L +L E+ ++          S + G G           D   L +L 
Sbjct: 499  ------GYMAKNKLNSLAEHYSAEG--------SHLTGDG-----------DRQSLNRLI 558

Query: 544  GQMSGNALQASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGA 603
             Q++ + L +  +DP Y QYL T    +A +    D SL RN  G S     +    Y A
Sbjct: 559  NQVA-SELHSPVMDPHYSQYLHTASSTAAPI----DHSLIRNNFGTS---NGDTANEYLA 618

Query: 604  LLSPQKSQYSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRH 663
            +L  Q  Q      G    +N   +F +P++ +   Y G+ + +P   NS       +  
Sbjct: 619  MLLAQNRQQ----LGNLNAANSR-FFESPSYDLGNMYLGNHLPSP-SKNSRNFQNMRMSQ 678

Query: 664  NDIHLRYPSGTRNLGGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEF 723
            +   ++ P      GG+    H+++G+  E   +SLLE FK+NKT+  ELSEI GHV EF
Sbjct: 679  SASMMKVP-----FGGLQGSSHVDIGSTAE---ASLLEGFKNNKTRSLELSEIVGHVIEF 738

Query: 724  SGDQYGSRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRE 783
            S DQYGSRFIQQKLETAT +EKN I+ EI+P    LMTDVFGNYVIQKFFEHG   QR+E
Sbjct: 739  SMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKE 798

Query: 784  LANKLFGHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQK 843
            LA ++ GH+L LSLQMYGCRVIQKA+EVV+L+Q+ +MVKELDG +M+CV DQNGNHVIQK
Sbjct: 799  LAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQK 858

Query: 844  CIECVPEEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSM 903
            CIE +P++ I FI+S+F+ +V+ LSTHPYGCRVIQRVLEH  D  TQ  +MEEI+ SV  
Sbjct: 859  CIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCT 918

Query: 904  LAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQ 963
            LAQDQYGNYV+QH+++HGKPHERS II +LAG+IV+MSQQKFASNVVEKCLTFGGP ERQ
Sbjct: 919  LAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQ 978

Query: 964  LLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTY 1023
            +LV+EMLG TDENEPLQAMMKD F NYVVQKVLETCDDQ   LILSRIKVHLNALK+YTY
Sbjct: 979  VLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTY 996

Query: 1024 GKHIVARVEKLVAAGERRIAAQSS 1030
            GKHIVARVEKL+  GERRI   SS
Sbjct: 1039 GKHIVARVEKLITTGERRIGLSSS 996

[Close]

BLAST of CmaCh02G007880 vs. ExPASy Swiss-Prot
Match: Q9LJX4 (Pumilio homolog 5 OS=Arabidopsis thaliana OX=3702 GN=APUM5 PE=1 SV=2)

HSP 1 Score: 489.6 bits (1259), Expect = 1.0e-136
Identity = 374/1033 (36.21%), Postives = 523/1033 (50.63%), Query Frame = 0


Query: 5    NDGSFG--DELETEIGLLLREQRRQETDDRERELNLYRSGSAPPTVEGSLSAVGGLFGGV 64
            + G FG  D    ++G L++  R    D   +  +  RS SAPP++EGS +A+  L    
Sbjct: 24   DSGIFGSLDMAVEDLGFLMKRNRLDSGDQTGKFPS--RSESAPPSMEGSFAALRNLLKQQ 83

Query: 65   PGSANAFAELSGSNNGNGFVSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKSAQR 124
             GS++     +  N    + SEE +RSDPAY +YY SN+NLNPRLPPPLIS+E+    + 
Sbjct: 84   EGSSSEVLSRAIEN----YDSEEEIRSDPAYVAYYLSNINLNPRLPPPLISRENQHLLRH 143

Query: 125  LKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDKGRGATEWGGDGL 184
                N        T   N+G  S   SL S     +  ++  E E   G   +       
Sbjct: 144  FGDNNQS----PTTSWDNMGIRS---SLHSSRTALSTHREEPEDEASSGEQQSY------ 203

Query: 185  IGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELANLRH 244
                   L  ++KS+A++ Q+D   T                 +++  +S+     + R 
Sbjct: 204  -----ASLAGRRKSIADMIQEDFPLTLSSVFKRPHSAGNRPIAQDIHAISSDTSSEHARR 263

Query: 245  ----DLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIG 304
                D+    ++R   +  SS A +S         S S +N    +L AR  S       
Sbjct: 264  LPESDINSVNLLRE-TDSLSSDAIASEDPFTTDLASQSFTNAQTERLNARQAS------- 323

Query: 305  GGRVGTAEKRNI----ASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQI 364
                   E  N+    ASP S   V+S +  + E        +  S        +  S  
Sbjct: 324  ------HEDNNLSVFGASPPS--SVASRMRRNQE--------DQQSQGRRMPPQYTPSSY 383

Query: 365  KQDSNNQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAE 424
            +  +++ Q  +Y   GG   + Q   +    + G   S+F                   +
Sbjct: 384  QVQASSPQQMSYPRIGGTQDMMQ---SLPKIATGEVHSTF-------------------Q 443

Query: 425  LQHSSVPPASLFLKGGQHASSHNNGAQYQHIDGTNLTYQNFGLSGY----SISPPLASMM 484
              H   PP  ++     + +S  +   +Q+   + +    +   GY     I P   S  
Sbjct: 444  SPHGLAPP-PMYTSTAAYMTS-LSPFYHQNFQSSGMFVPQYNYGGYPPASGIVPQYMSGY 503

Query: 485  PGQLGTANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQMSG 544
            P    T  +P    +++S S    SG  +  L  G++S                    SG
Sbjct: 504  PSHEATVPMP---YDISSTS----SGYNNPRLLPGVSS--------------------SG 563

Query: 545  NALQASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGALLSPQ 604
              +  S VDP  LQY     +  AQ+ A   P        +S+  + +    Y A   P 
Sbjct: 564  QNI-PSLVDPFQLQY-----FQQAQVDAYAPPFQSST---DSFGQKDQQAVGYMANHEPL 623

Query: 605  KSQYSVPFSGKSGVSNHHGYFG-NPAFGVHMSYPGSPMANPVLSNSPVG--PGSPVRHND 664
             S  S P  G     +   YF   P   V   YPGSP+A+PV+ +SPVG       R ++
Sbjct: 624  NSPLS-PGYGLQSPRHMGNYFAVPPGVRVMPQYPGSPLASPVMPSSPVGGMMSHFGRRSE 683

Query: 665  IHLRYPSGTRNLGGVMSPWHLEVGN----INESFSSSLLEEFKSNKTKCFELSEIAGHVF 724
                    +RN G     W    G     +++    S L+E KS   +  ELS+IAG V 
Sbjct: 684  TRYHQQGPSRNTGIYPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVV 743

Query: 725  EFSGDQYGSRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQR 784
            EFS DQ+GSRFIQQKLE  + +EK  ++ E++PQA  LMTDVFGNYVIQKF EHG   QR
Sbjct: 744  EFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQR 803

Query: 785  RELANKLFGHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVI 844
             EL  +L G +++LSLQMYGCRVIQKA+EV+D+DQK ++++ELDG++++CVRDQNGNHVI
Sbjct: 804  EELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVI 863

Query: 845  QKCIECVPEEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSV 904
            QKCIE +P   I F+++ F  QV TLSTHPYGCRVIQR+LEHC D+     +++EIL S 
Sbjct: 864  QKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESA 923

Query: 905  SMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTE 964
              LA DQYGNYV QHVLE GKP ER  II++L G +VQMSQ K+ASNVVEKCL     TE
Sbjct: 924  FALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTE 947

Query: 965  RQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKY 1017
            R+ L+ E++G ++E+  L AMMKDQFANYVVQKVLE   DQQRE+++ R+K+HL +L+KY
Sbjct: 984  REFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKY 947

[Close]

BLAST of CmaCh02G007880 vs. TAIR 10
Match: AT2G29190.1 (pumilio 2 )

HSP 1 Score: 1139.0 bits (2945), Expect = 0.0e+00
Identity = 633/1043 (60.69%), Postives = 758/1043 (72.67%), Query Frame = 0


Query: 3    GGNDGSFGDELETEIGLLLREQRRQ--ETDDRERELNLYRSGSAPPTVEGSLSAVGGLFG 62
            G  D SFGD+ E EIG+LL EQ+R+  E D+ ERELNLYRSGSAPPTV+GS+SA GGLF 
Sbjct: 13   GNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLYRSGSAPPTVDGSVSAAGGLFS 72

Query: 63   GVPGSANAFAELSGSNNGNGF-VSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKS 122
            G  G    F E  G N GNGF   +E  R DPAY SYYY+N+ LNPRLPPPL+S+ED + 
Sbjct: 73   G--GGGAPFLEFGGGNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRV 132

Query: 123  AQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDK-GRGATEWG 182
            AQRLKG++  LGG+G+ R+ N      ++SLFSMPPGF+ RKQ  E E++K    ++EW 
Sbjct: 133  AQRLKGSSNVLGGVGDRRKVN-----DSQSLFSMPPGFDQRKQ-HEFEVEKTSASSSEWD 192

Query: 183  GDGLIGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELA 242
             +GLIGLPGLG+G KQKS A+IFQ DMG   PVT  PSRP SRN F+ENV++ +      
Sbjct: 193  ANGLIGLPGLGIGGKQKSFADIFQADMGHGHPVTKQPSRPASRNTFDENVDSKN------ 252

Query: 243  NLRHDLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIG 302
            NL           S +  Q  GAPS Y+YAA +G SLSR+ TPDPQ +AR PSPCLTPIG
Sbjct: 253  NL-----------SPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIG 312

Query: 303  GGRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQIKQDS 362
             GRV + +KRN ++   FNG   G+NESS+LV+ALSGMNL+    ++E G    Q +QD 
Sbjct: 313  SGRVSSNDKRNTSNQSPFNG---GLNESSDLVNALSGMNLSGSGGLDERG----QAEQDV 372

Query: 363  NNQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAELQHS 422
               + Y +G+QGG N + Q  +  K++                         R+++L+  
Sbjct: 373  EKVRNYMFGLQGGHNEVNQHGFPNKSDQAQKATGLL----------------RNSQLR-- 432

Query: 423  SVPPASLFLKGGQHASSHNNG----AQYQHIDGTNLTYQNFGLSGYSISPPLASMMPGQL 482
                       G   S++N+G     QYQH+D  N    N+GL     +P +ASMM  QL
Sbjct: 433  -----------GAQGSTYNDGGGVATQYQHLDSPNYCLNNYGL-----NPAVASMMANQL 492

Query: 483  GTANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQM--SGNA 542
            GT N   ++EN ++ASA+G SG++SR+ GGG  S+    + ++S  LG+   +M   G  
Sbjct: 493  GTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSS--GQNLSESRNLGRFSNRMMGGGTG 552

Query: 543  LQASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGALLSPQKS 602
            LQ+   DP+Y QY       +  L  LNDPS+D N++GNSYMN LELQ+AY   L  QKS
Sbjct: 553  LQSHMADPMYHQY-------ADSLDLLNDPSMDVNFMGNSYMNMLELQRAY---LGAQKS 612

Query: 603  QYSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRHNDIHLRY 662
            QY VP+  KSG  N H  +G+P FG   SYPGSP+A+ +L NS V P SP+R  ++++RY
Sbjct: 613  QYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLLPNSLVSPCSPMRRGEVNMRY 672

Query: 663  PSGTRN-LGGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEFSGDQYG 722
            PS TRN  GGVM  WH++  +++E F SS+LEEFKSNKT+ FEL+EIAGHV EFS DQYG
Sbjct: 673  PSATRNYAGGVMGSWHMD-ASLDEGFGSSMLEEFKSNKTRGFELAEIAGHVVEFSSDQYG 732

Query: 723  SRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRELANKLF 782
            SRFIQQKLETAT DEKNM+Y+EIMP ALALMTDVFGNYVIQKFFEHGL  QRRELA+KLF
Sbjct: 733  SRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPPQRRELADKLF 792

Query: 783  GHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQKCIECVP 842
             ++L LSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGH+MRCVRDQNGNHV+QKCIECVP
Sbjct: 793  DNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVP 852

Query: 843  EEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSMLAQDQY 902
            EE I FI+STFF  VVTLSTHPYGCRVIQRVLEHC D +TQSKVM+EI+ ++SMLAQDQY
Sbjct: 853  EENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQY 912

Query: 903  GNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEM 962
            GNYV+QHVLEHGKP ER+ IIKELAGKIVQMSQQKFASNVVEKCLTFGGP ER+ LV+EM
Sbjct: 913  GNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEM 971

Query: 963  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVA 1022
            LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL RIKVHLNALKKYTYGKHIVA
Sbjct: 973  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVA 971

Query: 1023 RVEKLVAAGERRIAAQSSPHPSL 1035
            RVEKLVAAGERR+A QS   P +
Sbjct: 1033 RVEKLVAAGERRMALQSLTQPQM 971

[Close]

BLAST of CmaCh02G007880 vs. TAIR 10
Match: AT2G29190.2 (pumilio 2 )

HSP 1 Score: 1139.0 bits (2945), Expect = 0.0e+00
Identity = 633/1043 (60.69%), Postives = 758/1043 (72.67%), Query Frame = 0


Query: 3    GGNDGSFGDELETEIGLLLREQRRQ--ETDDRERELNLYRSGSAPPTVEGSLSAVGGLFG 62
            G  D SFGD+ E EIG+LL EQ+R+  E D+ ERELNLYRSGSAPPTV+GS+SA GGLF 
Sbjct: 13   GNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLYRSGSAPPTVDGSVSAAGGLFS 72

Query: 63   GVPGSANAFAELSGSNNGNGF-VSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKS 122
            G  G    F E  G N GNGF   +E  R DPAY SYYY+N+ LNPRLPPPL+S+ED + 
Sbjct: 73   G--GGGAPFLEFGGGNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRV 132

Query: 123  AQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDK-GRGATEWG 182
            AQRLKG++  LGG+G+ R+ N      ++SLFSMPPGF+ RKQ  E E++K    ++EW 
Sbjct: 133  AQRLKGSSNVLGGVGDRRKVN-----DSQSLFSMPPGFDQRKQ-HEFEVEKTSASSSEWD 192

Query: 183  GDGLIGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELA 242
             +GLIGLPGLG+G KQKS A+IFQ DMG   PVT  PSRP SRN F+ENV++ +      
Sbjct: 193  ANGLIGLPGLGIGGKQKSFADIFQADMGHGHPVTKQPSRPASRNTFDENVDSKN------ 252

Query: 243  NLRHDLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIG 302
            NL           S +  Q  GAPS Y+YAA +G SLSR+ TPDPQ +AR PSPCLTPIG
Sbjct: 253  NL-----------SPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIG 312

Query: 303  GGRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQIKQDS 362
             GRV + +KRN ++   FNG   G+NESS+LV+ALSGMNL+    ++E G    Q +QD 
Sbjct: 313  SGRVSSNDKRNTSNQSPFNG---GLNESSDLVNALSGMNLSGSGGLDERG----QAEQDV 372

Query: 363  NNQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAELQHS 422
               + Y +G+QGG N + Q  +  K++                         R+++L+  
Sbjct: 373  EKVRNYMFGLQGGHNEVNQHGFPNKSDQAQKATGLL----------------RNSQLR-- 432

Query: 423  SVPPASLFLKGGQHASSHNNG----AQYQHIDGTNLTYQNFGLSGYSISPPLASMMPGQL 482
                       G   S++N+G     QYQH+D  N    N+GL     +P +ASMM  QL
Sbjct: 433  -----------GAQGSTYNDGGGVATQYQHLDSPNYCLNNYGL-----NPAVASMMANQL 492

Query: 483  GTANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQM--SGNA 542
            GT N   ++EN ++ASA+G SG++SR+ GGG  S+    + ++S  LG+   +M   G  
Sbjct: 493  GTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSS--GQNLSESRNLGRFSNRMMGGGTG 552

Query: 543  LQASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGALLSPQKS 602
            LQ+   DP+Y QY       +  L  LNDPS+D N++GNSYMN LELQ+AY   L  QKS
Sbjct: 553  LQSHMADPMYHQY-------ADSLDLLNDPSMDVNFMGNSYMNMLELQRAY---LGAQKS 612

Query: 603  QYSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRHNDIHLRY 662
            QY VP+  KSG  N H  +G+P FG   SYPGSP+A+ +L NS V P SP+R  ++++RY
Sbjct: 613  QYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLLPNSLVSPCSPMRRGEVNMRY 672

Query: 663  PSGTRN-LGGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEFSGDQYG 722
            PS TRN  GGVM  WH++  +++E F SS+LEEFKSNKT+ FEL+EIAGHV EFS DQYG
Sbjct: 673  PSATRNYAGGVMGSWHMD-ASLDEGFGSSMLEEFKSNKTRGFELAEIAGHVVEFSSDQYG 732

Query: 723  SRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRELANKLF 782
            SRFIQQKLETAT DEKNM+Y+EIMP ALALMTDVFGNYVIQKFFEHGL  QRRELA+KLF
Sbjct: 733  SRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPPQRRELADKLF 792

Query: 783  GHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQKCIECVP 842
             ++L LSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGH+MRCVRDQNGNHV+QKCIECVP
Sbjct: 793  DNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVP 852

Query: 843  EEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSMLAQDQY 902
            EE I FI+STFF  VVTLSTHPYGCRVIQRVLEHC D +TQSKVM+EI+ ++SMLAQDQY
Sbjct: 853  EENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQY 912

Query: 903  GNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEM 962
            GNYV+QHVLEHGKP ER+ IIKELAGKIVQMSQQKFASNVVEKCLTFGGP ER+ LV+EM
Sbjct: 913  GNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEM 971

Query: 963  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVA 1022
            LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL RIKVHLNALKKYTYGKHIVA
Sbjct: 973  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVA 971

Query: 1023 RVEKLVAAGERRIAAQSSPHPSL 1035
            RVEKLVAAGERR+A QS   P +
Sbjct: 1033 RVEKLVAAGERRMALQSLTQPQM 971

[Close]

BLAST of CmaCh02G007880 vs. TAIR 10
Match: AT2G29200.1 (pumilio 1 )

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 629/1043 (60.31%), Postives = 752/1043 (72.10%), Query Frame = 0


Query: 3    GGNDGSFGDELETEIGLLLREQRRQ--ETDDRERELNLYRSGSAPPTVEGSLSAVGGLFG 62
            G  D SFGD+ E EIG+LL EQ+R+  E D+ ERELNL+RSGSAPPTV+GS+SA GGLF 
Sbjct: 13   GNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLFRSGSAPPTVDGSVSAAGGLFS 72

Query: 63   GVPGSANAFAELSGSNNGNGF-VSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKS 122
            G  G    F E  G N GNGF   +E  R DPAY SYYY+N+ LNPRLPPPL+S+ED + 
Sbjct: 73   G--GGGAPFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRV 132

Query: 123  AQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDKGRGATEWGG 182
            AQRLKG+N  LGG+G+ R+ N       RSLFSMPPGF   K         G  A+EW  
Sbjct: 133  AQRLKGSNNVLGGVGDRRKVNDN-----RSLFSMPPGFEGEK--------TGASASEWDA 192

Query: 183  DGLIGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELAN 242
            +GLIGLPGLGLG KQKS A+IFQ DMG   PV   PSRP SRN F+ENV++ +      N
Sbjct: 193  NGLIGLPGLGLGGKQKSFADIFQADMGHGHPVAQQPSRPASRNTFDENVDSNN------N 252

Query: 243  LRHDLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIGG 302
            L           S +  Q  GAPS Y+YAA +G SLSR+ TPDPQ +AR PSPCLTPIG 
Sbjct: 253  L-----------SPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGS 312

Query: 303  GRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQIKQDSN 362
            GR+ + +KRN ++   FNGV+SG+NESS+LV+ALSG+NL+    +++     SQ +QD  
Sbjct: 313  GRMSSNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSCSVGLDDR----SQAEQDVE 372

Query: 363  NQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAELQHSS 422
              + Y +G+QGG N + Q  +  K++       S                 R+++L+   
Sbjct: 373  KVRNYMFGLQGGHNEVNQHEFPNKSDQAHKATGSL----------------RNSQLR--- 432

Query: 423  VPPASLFLKGGQHASSHNNGA----QYQHIDGTNLTYQNFGLSGYSISPPLASMMPGQLG 482
                      G H S++N G      YQ +D       N+ L+ Y+++P +ASMM  QLG
Sbjct: 433  ----------GPHGSAYNGGVGLANPYQQLDS-----PNYCLNNYALNPAVASMMANQLG 492

Query: 483  TANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQMSGN--AL 542
              N   +++NV   SALG SG++SR  G G  S+    + ++S  LG+   +M G    L
Sbjct: 493  NNNFAPMYDNV---SALGFSGMDSRHHGRGFVSS--GQNLSESRNLGRFSNRMMGGGAGL 552

Query: 543  QASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYL-GNSYMNQLELQKAYGALLSPQKS 602
            Q+  VDP+Y QY       +  L  LNDPS+DRN++ G+SYM+ LELQ+AY   L  QKS
Sbjct: 553  QSHMVDPMYNQY-------ADSLDLLNDPSMDRNFMGGSSYMDMLELQRAY---LGAQKS 612

Query: 603  QYSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRHNDIHLRY 662
            QY VP+  KSG  N H Y+G+P FG +MSYPGSP+A+  + NS + P SP+R +++++R+
Sbjct: 613  QYGVPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRDEVNMRF 672

Query: 663  PSGTRNL-GGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEFSGDQYG 722
            PS TRN  GG+M  WH++  + +E F SS+LEEFKSNKT+ FELSEIAGHV EFS DQYG
Sbjct: 673  PSATRNYSGGLMGSWHMD-ASFDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYG 732

Query: 723  SRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRELANKLF 782
            SRFIQQKLETAT DEKNM+Y+EIMPQAL LMTDVFGNYVIQKFFEHGL  QRRELA KLF
Sbjct: 733  SRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQRRELAEKLF 792

Query: 783  GHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQKCIECVP 842
             H+L LSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGH+MRCVRDQNGNHV+QKCIECVP
Sbjct: 793  DHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVP 852

Query: 843  EEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSMLAQDQY 902
            EE I FI+STFF  VVTLSTHPYGCRVIQRVLEHC D +TQSKVMEEIL +VSMLAQDQY
Sbjct: 853  EENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQY 912

Query: 903  GNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEM 962
            GNYVVQHVLEHGKP ER+ IIKELAGKIVQMSQQKFASNVVEKCLTFGGP ER+LLV+EM
Sbjct: 913  GNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEM 967

Query: 963  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVA 1022
            LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL+RIKVHL ALKKYTYGKH+VA
Sbjct: 973  LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVA 967

Query: 1023 RVEKLVAAGERRIAAQSSPHPSL 1035
            R+EKLVAAGERR+A QS   P +
Sbjct: 1033 RIEKLVAAGERRMALQSLTQPQM 967

[Close]

BLAST of CmaCh02G007880 vs. TAIR 10
Match: AT2G29140.1 (pumilio 3 )

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 623/1040 (59.90%), Postives = 747/1040 (71.83%), Query Frame = 0


Query: 3    GGNDGSFGDELETEIGLLLREQRRQ--ETDDRERELNLYRSGSAPPTVEGSLSAVGGLFG 62
            G  D SFGD+ E EIG+LL EQ+R+  E D+ ERELNLYRSGSAPPTV+GSLSA GGLF 
Sbjct: 14   GNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLYRSGSAPPTVDGSLSAAGGLFS 73

Query: 63   GVPGSANAFAELSGSNNGNGF-VSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWKS 122
            G  G   +F E  G N GNGF   +E  R DPAY SYYY+N+ LNPRLPPPL+S+ED + 
Sbjct: 74   G--GGGASFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRV 133

Query: 123  AQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEVELDKGRGATEWGG 182
            AQRLKG+N  LGG+G+ R+ N      +RSLFSMPPGF A K         G  A+EW  
Sbjct: 134  AQRLKGSNNVLGGVGDRRKVN-----DSRSLFSMPPGFEAGK--------PGASASEWDA 193

Query: 183  DGLIGLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENVETMSATDELAN 242
            +GLI   GLGLG KQKS A+IFQ DMG   PV   PSRP SRN F+ENV++ +      N
Sbjct: 194  NGLI---GLGLGGKQKSFADIFQADMGH--PVVQQPSRPASRNTFDENVDSNN------N 253

Query: 243  LRHDLMVSEVMRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVARAPSPCLTPIGG 302
            L           S +  Q  GAPS Y YAA +G SLSR+ TPDPQ +AR PSPCLTPIG 
Sbjct: 254  L-----------SPSASQGIGAPSPYCYAAVLGSSLSRNGTPDPQGIARVPSPCLTPIGS 313

Query: 303  GRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEEGHLLSQIKQDSN 362
            GRV + +KRN ++   FNGV+SG+NESS+LV+ALSG+NL+    ++E G    Q +QD  
Sbjct: 314  GRVSSNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSGTGGLDERG----QAEQDVE 373

Query: 363  NQQGYAYGMQGGQNHIKQQSYAKKNESGGAPRSSFSDLNDNNGGGPNFSRDRHAELQHSS 422
              + Y +G+Q G N +    +  +++      S                  R+++++   
Sbjct: 374  KVRNYMFGLQDGHNEVNPHGFPNRSDQARGTASC-----------------RNSQMR--- 433

Query: 423  VPPASLFLKGGQHASSHNNGA----QYQHIDGTNLTYQNFGLSGYSISPPLASMMPGQLG 482
                      G   S++N+G+     YQH D  N          Y+++P +ASMM  QLG
Sbjct: 434  ----------GSQGSAYNSGSGVANPYQHHDSPNY---------YALNPAVASMMANQLG 493

Query: 483  TANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLGGQM--SGNAL 542
            T N   ++EN  +++ LG S ++SR+ GG   S+    + ++S  +G++G +M   G   
Sbjct: 494  TNNYSPMYEN--ASATLGYSAMDSRLHGGSFVSS--GQNLSESRNIGRVGNRMMEGGTGH 553

Query: 543  QASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGALLSPQKSQ 602
             +   DP+Y QY R  E A +    LNDPS+DRNY GNSYMN LE+Q+AY   L  QKSQ
Sbjct: 554  PSHLADPMYHQYARFSENADS-FDLLNDPSMDRNY-GNSYMNMLEIQRAY---LGSQKSQ 613

Query: 603  YSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRHNDIHLRYP 662
            Y +P+  KSG  N H Y+G+P FG +MSYPGSP+A+  + NS + P SP+R  ++++RYP
Sbjct: 614  YGLPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEVNMRYP 673

Query: 663  SGTRN-LGGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEFSGDQYGS 722
            + TRN  GGVM  WH++  +++E F SS+LEEFKSNKT+ FELSEIAGHV EFS DQYGS
Sbjct: 674  AATRNYTGGVMGSWHMD-ASLDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYGS 733

Query: 723  RFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRELANKLFG 782
            RFIQQKLETAT DEKNM+Y+EIMP+ALALMTDVFGNYVIQKFFEHGL  QRREL  KL  
Sbjct: 734  RFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPPQRRELGEKLID 793

Query: 783  HILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQKCIECVPE 842
            ++L LSLQMYGCRVIQKAIEVVDLDQKI+MVKELDGH+MRCVRDQNGNHV+QKCIECVPE
Sbjct: 794  NVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCIECVPE 853

Query: 843  EAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSMLAQDQYG 902
            E I FI+STFF  VVTLSTHPYGCRVIQRVLEHC + +TQSKVMEEIL +VSML QDQYG
Sbjct: 854  ENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYG 913

Query: 903  NYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEML 962
            NYVVQHVLEHGKP ER+ IIKELAGKIVQMSQQKFASNVVEKCLTFGGP ER+LLV+EML
Sbjct: 914  NYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEML 961

Query: 963  GTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVAR 1022
            GTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL+RIKVHLNALKKYTYGKHIVAR
Sbjct: 974  GTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVAR 961

Query: 1023 VEKLVAAGERRIAAQSSPHP 1033
            VEKLVAAGERR+A QS P P
Sbjct: 1034 VEKLVAAGERRMALQSLPQP 961

[Close]

BLAST of CmaCh02G007880 vs. TAIR 10
Match: AT3G10360.1 (pumilio 4 )

HSP 1 Score: 669.8 bits (1727), Expect = 3.9e-192
Identity = 449/1044 (43.01%), Postives = 612/1044 (58.62%), Query Frame = 0


Query: 4    GNDGSFGDELETEIGLLLREQRRQET--DDRERELNLYRSGSAPPTVEGSLSAVGGLFGG 63
            G++    D  + E+  LL++ R Q++   +RER+++++RSGSAPPTVEG L A+   +  
Sbjct: 19   GSNVDLEDRFQRELESLLQQHRNQQSFGRERERDIDVHRSGSAPPTVEGLLRAMDNQYLN 78

Query: 64   VPGSANA-FAELSGSNNGNG--FVSEELLRSDPAYSSYYYSNVNLNPRLPPPLISKEDWK 123
               S +     +S     NG   +S++ LR  P Y SYYYSN + NPRLPPPL+S+EDW+
Sbjct: 79   NNNSDHRDVGNISSITTSNGVELLSDDELRWHPEYLSYYYSNEHSNPRLPPPLLSREDWR 138

Query: 124  SAQRLKGANLGLGGIGETRRSNVGTDSAARSLFSMPPGFNARKQASEV-----ELDKGRG 183
             AQR   +      +GE R+  V  D+++ SLFS+ PG    +  +++      + +GR 
Sbjct: 139  VAQRFHNSESVFDPVGEWRKKTVEVDNSS-SLFSVQPGVPVEQAENDLMELRNAVAQGRS 198

Query: 184  ----ATEWGGDGLIGLPGL-GLGTKQKSLAEIFQDDMGRTTPVTGLPSRPTSRNAFEENV 243
                  + G + LIGL G  GLG ++KS A+I Q+ + R   +    SRP S N F +  
Sbjct: 199  QKVQRLDQGREDLIGLSGYSGLGPRRKSFADILQEGLERDAALGSQLSRPASCNTFRD-- 258

Query: 244  ETMSATDELANLRHDLMVSEV-MRSGANGQSSGAPSSYTYAAAVGGSLSRSNTPDPQLVA 303
              M     L+N       S +      +  +  +P++    + +   + R+ TPD  LV 
Sbjct: 259  --MKDAAVLSNFSAGGFDSPLAFHDSLHSTAKNSPNT-MLGSTMSSPVPRNRTPDSHLVG 318

Query: 304  RAPSPCLTPIGGGRVGTAEKRNIASPKSFNGVSSGINESSELVSALSGMNLASDDAINEE 363
            R+ +  L PI G RVG  EK+N       N  S     ++++   LS +N++    + +E
Sbjct: 319  RSTASGLPPI-GTRVGPVEKKNTFGTAIQNCES---YTAADVADTLSRLNMSEMSQV-KE 378

Query: 364  GHLLSQIKQDSNNQQG-YAYGMQGGQNHIKQQSYAK-KNESGGAPRSSFSDLNDNNGGGP 423
             H+ SQ++ +  NQ     Y   G +  ++QQ+ A+ K+    A     S    + G   
Sbjct: 379  NHMQSQLQVELENQSDVMRYIPNGHKKALRQQNTAETKDHLFSANYGGMSGYGASLGAST 438

Query: 424  NFSRDRHAELQHSSVPPASLFLKGGQHASSHNNGAQYQHIDGTNLTYQNFGLSGYSISPP 483
              S  +   +   +   ASL+     H+   + G    +I   N+   +F  +G      
Sbjct: 439  VGSHGQ-VNIPKRTSSSASLY-STSDHSRLGSVGLSDVNIRNGNINGTDFSTAG------ 498

Query: 484  LASMMPGQLGTANLPTLFENVASASALGASGLESRVLGGGLASANLASSAADSHILGKLG 543
                  G +    L +L E+ ++          S + G G           D   L +L 
Sbjct: 499  ------GYMAKNKLNSLAEHYSAEG--------SHLTGDG-----------DRQSLNRLI 558

Query: 544  GQMSGNALQASFVDPIYLQYLRTPEYASAQLGALNDPSLDRNYLGNSYMNQLELQKAYGA 603
             Q++ + L +  +DP Y QYL T    +A +    D SL RN  G S     +    Y A
Sbjct: 559  NQVA-SELHSPVMDPHYSQYLHTASSTAAPI----DHSLIRNNFGTS---NGDTANEYLA 618

Query: 604  LLSPQKSQYSVPFSGKSGVSNHHGYFGNPAFGVHMSYPGSPMANPVLSNSPVGPGSPVRH 663
            +L  Q  Q      G    +N   +F +P++ +   Y G+ + +P   NS       +  
Sbjct: 619  MLLAQNRQQ----LGNLNAANSR-FFESPSYDLGNMYLGNHLPSP-SKNSRNFQNMRMSQ 678

Query: 664  NDIHLRYPSGTRNLGGVMSPWHLEVGNINESFSSSLLEEFKSNKTKCFELSEIAGHVFEF 723
            +   ++ P      GG+    H+++G+  E   +SLLE FK+NKT+  ELSEI GHV EF
Sbjct: 679  SASMMKVP-----FGGLQGSSHVDIGSTAE---ASLLEGFKNNKTRSLELSEIVGHVIEF 738

Query: 724  SGDQYGSRFIQQKLETATVDEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAVQRRE 783
            S DQYGSRFIQQKLETAT +EKN I+ EI+P    LMTDVFGNYVIQKFFEHG   QR+E
Sbjct: 739  SMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKE 798

Query: 784  LANKLFGHILTLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHIMRCVRDQNGNHVIQK 843
            LA ++ GH+L LSLQMYGCRVIQKA+EVV+L+Q+ +MVKELDG +M+CV DQNGNHVIQK
Sbjct: 799  LAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQK 858

Query: 844  CIECVPEEAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDENTQSKVMEEILGSVSM 903
            CIE +P++ I FI+S+F+ +V+ LSTHPYGCRVIQRVLEH  D  TQ  +MEEI+ SV  
Sbjct: 859  CIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCT 918

Query: 904  LAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPTERQ 963
            LAQDQYGNYV+QH+++HGKPHERS II +LAG+IV+MSQQKFASNVVEKCLTFGGP ERQ
Sbjct: 919  LAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQ 978

Query: 964  LLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTY 1023
            +LV+EMLG TDENEPLQAMMKD F NYVVQKVLETCDDQ   LILSRIKVHLNALK+YTY
Sbjct: 979  VLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTY 996

Query: 1024 GKHIVARVEKLVAAGERRIAAQSS 1030
            GKHIVARVEKL+  GERRI   SS
Sbjct: 1039 GKHIVARVEKLITTGERRIGLSSS 996

The following BLAST results are available for this feature:

BLAST of CmaCh02G007880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW06	0.0e+00	60.69	Pumilio homolog 2 OS=Arabidopsis thaliana OX=3702 GN=APUM2 PE=1 SV=1	[more]
Q9ZW07	0.0e+00	60.31	Pumilio homolog 1 OS=Arabidopsis thaliana OX=3702 GN=APUM1 PE=1 SV=1	[more]
Q9ZW02	0.0e+00	59.90	Pumilio homolog 3 OS=Arabidopsis thaliana OX=3702 GN=APUM3 PE=1 SV=1	[more]
Q9SS47	5.5e-191	43.01	Pumilio homolog 4 OS=Arabidopsis thaliana OX=3702 GN=APUM4 PE=1 SV=2	[more]
Q9LJX4	1.0e-136	36.21	Pumilio homolog 5 OS=Arabidopsis thaliana OX=3702 GN=APUM5 PE=1 SV=2	[more]

BLAST of CmaCh02G007880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29190.1	0.0e+00	60.69	pumilio 2	[more]
AT2G29190.2	0.0e+00	60.69	pumilio 2	[more]
AT2G29200.1	0.0e+00	60.31	pumilio 1	[more]
AT2G29140.1	0.0e+00	59.90	pumilio 3	[more]
AT3G10360.1	3.9e-192	43.01	pumilio 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1165..1185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 423..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1170..1191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1043..1061
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1024..1061
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1166..1191
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 30..1025
None	No IPR available	PANTHER	PTHR12537:SF128	PUMILIO HOMOLOG 1-RELATED	coord: 30..1025
IPR001313	Pumilio RNA-binding repeat	SMART	SM00025	pum_5	coord: 733..768 e-value: 1.1E-4 score: 31.6 coord: 914..949 e-value: 6.5E-6 score: 35.7 coord: 697..732 e-value: 1.2E-5 score: 34.8 coord: 769..804 e-value: 7.4E-8 score: 42.1 coord: 878..913 e-value: 9.5E-7 score: 38.4 coord: 956..991 e-value: 6.4E-7 score: 39.0 coord: 841..877 e-value: 9.5E-7 score: 38.4 coord: 805..840 e-value: 4.0E-7 score: 39.7
IPR001313	Pumilio RNA-binding repeat	PFAM	PF00806	PUF	coord: 964..993 e-value: 1.7E-8 score: 33.9 coord: 845..880 e-value: 9.0E-15 score: 54.0 coord: 883..915 e-value: 2.4E-10 score: 39.9 coord: 816..839 e-value: 1.6E-5 score: 24.5 coord: 773..806 e-value: 1.9E-9 score: 37.0 coord: 701..735 e-value: 9.4E-10 score: 38.0 coord: 738..769 e-value: 7.4E-6 score: 25.5 coord: 919..951 e-value: 2.9E-6 score: 26.9
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 805..840 score: 9.923805
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 697..732 score: 10.717073
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 878..913 score: 12.326939
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 841..877 score: 10.950386
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 733..768 score: 9.83048
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 769..804 score: 10.600416
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 914..949 score: 9.480509
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 950..991 score: 10.18045
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 677..1023 e-value: 5.9E-143 score: 478.1
IPR012940	Nucleic acid binding NABP	PFAM	PF07990	NABP	coord: 288..696 e-value: 2.7E-134 score: 448.6
IPR033133	Pumilio homology domain	PROSITE	PS50303	PUM_HD	coord: 677..1017 score: 132.394623
IPR033712	Pumilio, RNA binding domain	CDD	cd07920	Pumilio	coord: 693..1013 e-value: 2.52028E-176 score: 519.456
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 680..1014

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G007880.1	CmaCh02G007880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006417	regulation of translation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding