CmaCh02G007140 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G007140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	GDSL esterase/lipase
Location	Cma_Chr02: 4326334 .. 4327125 (-)
RNA-Seq Expression	CmaCh02G007140
Synteny	CmaCh02G007140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATTCTTATATTTGGTGATTGATACCGGAAATAACAACTTCATTCACACTATTTTTAAGGCTAATTATGCACCATACGACAAAGATTTTCTGGATCATGTTGCTACGGGAAGGTTTAGTGATGTAAAACTCATCCCTGATATGATAACTTCTAAGTTAGGCATAAAAGAACTTGTTCCTTCATTTTTGGATCCAAAACTTTCAGATGATGATGTCAAAACAGGTGTTAGTTTTGCGTCAGCTGGCTTGGGGTTTGACGATTTGACTTCTATGATATCCAATGTCATTCATGTGATGAAGCAAATTGATCTTTTCAAAAACTACATTCAAAGGCTTCAAGGGATTGTGGGTGTGGAAGAAAGTAGAAGGATTATTGGTAATGCTTTGGTTGTTATTATTGCAGGAACTAATGACTCAGCATTAATTTCTACGACCTTCTGACAAGACAACTACAATACAATATTAGCGGTTACCAAGGTTTTATACAGAATAGACTACAAAGCTTGATCGAAGTAAATTATCTTAACATTAAAAACTTTCTAGTATGTGGCTTGTTTTCCATATTATTATTTTTAAACATAATTATGATTGAAAATTGACTGGAAATTTACCAACTTGGATGTCGTTATATAGTTGTTGCTGGCCTCCCTCCGGTTGGTTATCTTTCCATTCAAGAGACTATATCATTTCAAAATCCCCTCCACCGAGTATGTTTGGAGGATCAAAATTCAGATTCCAAAGACTACAACCAAAAGCTTTCAAAGCTACTTAGCAATTTACAATAACAACTAA

mRNA sequence

CTATTCTTATATTTGGTGATTGATACCGGAAATAACAACTTCATTCACACTATTTTTAAGGCTAATTATGCACCATACGACAAAGATTTTCTGGATCATGTTGCTACGGGAAGGTTTAGTGATGTAAAACTCATCCCTGATATGATAACTTCTAAGTTAGGCATAAAAGAACTTGTTCCTTCATTTTTGGATCCAAAACTTTCAGATGATGATGTCAAAACAGGTGTTAGTTTTGCGTCAGCTGGCTTGGGGTTTGACGATTTGACTTCTATGATATCCAATGTCATTCATGTGATGAAGCAAATTGATCTTTTCAAAAACTACATTCAAAGGCTTCAAGGGATTGTGGGTGTGGAAGAAAGTAGAAGGATTATTGGTAATGCTTTGGTTAATAGACTACAAAGCTTGATCGAAGTAAATTATCTTAACATTAAAAACTTTCTATTGTTGCTGGCCTCCCTCCGGTTGGTTATCTTTCCATTCAAGAGACTATATCATTTCAAAATCCCCTCCACCGAGTATGTTTGGAGGATCAAAATTCAGATTCCAAAGACTACAACCAAAAGCTTTCAAAGCTACTTAGCAATTTACAATAACAACTAA

Coding sequence (CDS)

CTATTCTTATATTTGGTGATTGATACCGGAAATAACAACTTCATTCACACTATTTTTAAGGCTAATTATGCACCATACGACAAAGATTTTCTGGATCATGTTGCTACGGGAAGGTTTAGTGATGTAAAACTCATCCCTGATATGATAACTTCTAAGTTAGGCATAAAAGAACTTGTTCCTTCATTTTTGGATCCAAAACTTTCAGATGATGATGTCAAAACAGGTGTTAGTTTTGCGTCAGCTGGCTTGGGGTTTGACGATTTGACTTCTATGATATCCAATGTCATTCATGTGATGAAGCAAATTGATCTTTTCAAAAACTACATTCAAAGGCTTCAAGGGATTGTGGGTGTGGAAGAAAGTAGAAGGATTATTGGTAATGCTTTGGTTAATAGACTACAAAGCTTGATCGAAGTAAATTATCTTAACATTAAAAACTTTCTATTGTTGCTGGCCTCCCTCCGGTTGGTTATCTTTCCATTCAAGAGACTATATCATTTCAAAATCCCCTCCACCGAGTATGTTTGGAGGATCAAAATTCAGATTCCAAAGACTACAACCAAAAGCTTTCAAAGCTACTTAGCAATTTACAATAACAACTAA

Protein sequence

LFLYLVIDTGNNNFIHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDPKLSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRIIGNALVNRLQSLIEVNYLNIKNFLLLLASLRLVIFPFKRLYHFKIPSTEYVWRIKIQIPKTTTKSFQSYLAIYNNN

Homology

[Close]

BLAST of CmaCh02G007140 vs. ExPASy Swiss-Prot
Match: Q9LMJ3 (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana OX=3702 GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 9.7e-32
Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 7   IDTGNNNFIHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDPK 66
           IDTGNNN+I T  +AN+ PY  +F  H ATGRFS+ KLIPD I S +GIK+ VP FLDP 
Sbjct: 46  IDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPH 105

Query: 67  LSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRIIG 126
           LSD D+ TGV FASAG G+D+LT   ++ + V KQ D+ ++Y++RL  IVG E++  I+ 
Sbjct: 106 LSDSDIITGVCFASAGSGYDNLTDRATSTLSVDKQADMLRSYVERLSQIVGDEKAASIVS 165

Query: 127 NALV 131
            ALV
Sbjct: 166 EALV 169

[Close]

BLAST of CmaCh02G007140 vs. ExPASy Swiss-Prot
Match: O22918 (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana OX=3702 GN=At2g30220 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 71/124 (57.26%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 8   DTGNNNFI-HTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDPK 67
           DTGNNN+    +FKAN+ PY  D   H A GRFS+ KLI D+I++KL IKE VP FL P 
Sbjct: 43  DTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGKLISDVISTKLNIKEFVPPFLQPN 102

Query: 68  LSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRIIG 127
           +SD D+ TGV FASAG G+DD TS+ S  I V +Q  +FKNYI RL+GIVG +++  II 
Sbjct: 103 ISDQDIVTGVCFASAGAGYDDETSLSSKAIPVSQQPSMFKNYIARLKGIVGDKKAMEIIN 162

Query: 128 NALV 131
           NALV
Sbjct: 163 NALV 166

[Close]

BLAST of CmaCh02G007140 vs. ExPASy Swiss-Prot
Match: O22927 (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana OX=3702 GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-31
Identity = 71/125 (56.80%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 7   IDTGNNNF-IHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDP 66
           +DTGNNN+   TIFKA + PY  D   H A GR+S+ K+I D+I SKL IKELVP FL P
Sbjct: 43  VDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLNIKELVPPFLQP 102

Query: 67  KLSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRII 126
            +S  D+ TGVSFASAG G+DD +S+ S  I V +Q  +FKNYI RL+GIVG +++  II
Sbjct: 103 NISHQDIVTGVSFASAGAGYDDRSSLSSKAIPVSQQPSMFKNYIARLKGIVGDKKAMEII 162

Query: 127 GNALV 131
            NALV
Sbjct: 163 NNALV 167

[Close]

BLAST of CmaCh02G007140 vs. ExPASy Swiss-Prot
Match: Q9SIQ3 (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana OX=3702 GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.8e-31
Identity = 69/125 (55.20%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 7   IDTGNNNF-IHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDP 66
           +DTGNNN+ + TIF+A + PY  D  D  A GRFS+ KLI D+I +KL IKE +P FL P
Sbjct: 44  VDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQP 103

Query: 67  KLSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRII 126
            LSD D+ TGV FASAG G+DDLTS+ +  I V +Q ++FK+YI RL+GIVG +++  II
Sbjct: 104 NLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEII 163

Query: 127 GNALV 131
            NA V
Sbjct: 164 NNAFV 168

[Close]

BLAST of CmaCh02G007140 vs. ExPASy Swiss-Prot
Match: Q9SIQ2 (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana OX=3702 GN=At2g31550 PE=3 SV=3)

HSP 1 Score: 136.0 bits (341), Expect = 4.8e-31
Identity = 69/125 (55.20%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 7   IDTGNNNF-IHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDP 66
           +DTGNNN+ + TIF+A + PY  D  D  A GRFS+ KLI D+I +KL IKE +P FL P
Sbjct: 44  VDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQP 103

Query: 67  KLSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRII 126
            LSD D+ TGV FASAG G+DDLTS+ +  I V +Q ++FK+YI RL+GIVG +++  II
Sbjct: 104 NLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEII 163

Query: 127 GNALV 131
            NA V
Sbjct: 164 NNAFV 168

[Close]

BLAST of CmaCh02G007140 vs. TAIR 10
Match: AT1G06990.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 6.9e-33
Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 7   IDTGNNNFIHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDPK 66
           IDTGNNN+I T  +AN+ PY  +F  H ATGRFS+ KLIPD I S +GIK+ VP FLDP 
Sbjct: 46  IDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPH 105

Query: 67  LSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRIIG 126
           LSD D+ TGV FASAG G+D+LT   ++ + V KQ D+ ++Y++RL  IVG E++  I+ 
Sbjct: 106 LSDSDIITGVCFASAGSGYDNLTDRATSTLSVDKQADMLRSYVERLSQIVGDEKAASIVS 165

Query: 127 NALV 131
            ALV
Sbjct: 166 EALV 169

[Close]

BLAST of CmaCh02G007140 vs. TAIR 10
Match: AT2G30220.1 (GDSL-like Lipase/Acylhydrolase family protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.0e-33
Identity = 71/124 (57.26%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 8   DTGNNNFI-HTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDPK 67
           DTGNNN+    +FKAN+ PY  D   H A GRFS+ KLI D+I++KL IKE VP FL P 
Sbjct: 43  DTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGKLISDVISTKLNIKEFVPPFLQPN 102

Query: 68  LSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRIIG 127
           +SD D+ TGV FASAG G+DD TS+ S  I V +Q  +FKNYI RL+GIVG +++  II 
Sbjct: 103 ISDQDIVTGVCFASAGAGYDDETSLSSKAIPVSQQPSMFKNYIARLKGIVGDKKAMEIIN 162

Query: 128 NALV 131
           NALV
Sbjct: 163 NALV 166

[Close]

BLAST of CmaCh02G007140 vs. TAIR 10
Match: AT2G30310.1 (GDSL-like Lipase/Acylhydrolase family protein )

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-32
Identity = 71/125 (56.80%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 7   IDTGNNNF-IHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDP 66
           +DTGNNN+   TIFKA + PY  D   H A GR+S+ K+I D+I SKL IKELVP FL P
Sbjct: 43  VDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLNIKELVPPFLQP 102

Query: 67  KLSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRII 126
            +S  D+ TGVSFASAG G+DD +S+ S  I V +Q  +FKNYI RL+GIVG +++  II
Sbjct: 103 NISHQDIVTGVSFASAGAGYDDRSSLSSKAIPVSQQPSMFKNYIARLKGIVGDKKAMEII 162

Query: 127 GNALV 131
            NALV
Sbjct: 163 NNALV 167

[Close]

BLAST of CmaCh02G007140 vs. TAIR 10
Match: AT2G31540.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-32
Identity = 69/125 (55.20%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 7   IDTGNNNF-IHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDP 66
           +DTGNNN+ + TIF+A + PY  D  D  A GRFS+ KLI D+I +KL IKE +P FL P
Sbjct: 44  VDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQP 103

Query: 67  KLSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRII 126
            LSD D+ TGV FASAG G+DDLTS+ +  I V +Q ++FK+YI RL+GIVG +++  II
Sbjct: 104 NLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEII 163

Query: 127 GNALV 131
            NA V
Sbjct: 164 NNAFV 168

[Close]

BLAST of CmaCh02G007140 vs. TAIR 10
Match: AT2G24560.1 (GDSL-like Lipase/Acylhydrolase family protein )

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30
Identity = 66/125 (52.80%), Postives = 88/125 (70.40%), Query Frame = 0


Query: 7   IDTGNNNF-IHTIFKANYAPYDKDFLDHVATGRFSDVKLIPDMITSKLGIKELVPSFLDP 66
           +DTGNNN+   TIFKA + PY  D  +H A+GRF++ K+  D+I +KL IK+ VP FL P
Sbjct: 43  VDTGNNNYHSQTIFKAKHLPYGIDLPNHKASGRFTNGKIFSDIIATKLNIKQFVPPFLQP 102

Query: 67  KLSDDDVKTGVSFASAGLGFDDLTSMISNVIHVMKQIDLFKNYIQRLQGIVGVEESRRII 126
            LSD ++ TGV FASAG G+DD TS+ +  I V+ Q  +FKNYI RL+ IVG +++  II
Sbjct: 103 NLSDQEIVTGVCFASAGAGYDDHTSLSTQAIRVLDQQKMFKNYIARLKSIVGDKKAMEII 162

Query: 127 GNALV 131
            NALV
Sbjct: 163 KNALV 167

The following BLAST results are available for this feature:

BLAST of CmaCh02G007140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMJ3	9.7e-32	54.84	GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana OX=3702 GN=At1g06990 PE=2...	[more]
O22918	1.3e-31	57.26	GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana OX=3702 GN=At2g30220 PE=3...	[more]
O22927	3.7e-31	56.80	GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana OX=3702 GN=At2g30310 PE=2...	[more]
Q9SIQ3	4.8e-31	55.20	GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana OX=3702 GN=At2g31540 PE=2...	[more]
Q9SIQ2	4.8e-31	55.20	GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana OX=3702 GN=At2g31550 PE=3...	[more]

BLAST of CmaCh02G007140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06990.1	6.9e-33	54.84	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT2G30220.1	9.0e-33	57.26	GDSL-like Lipase/Acylhydrolase family protein	[more]
AT2G30310.1	2.6e-32	56.80	GDSL-like Lipase/Acylhydrolase family protein	[more]
AT2G31540.1	3.4e-32	55.20	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT2G24560.1	2.4e-30	52.80	GDSL-like Lipase/Acylhydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036514	SGNH hydrolase superfamily	GENE3D	3.40.50.1110	SGNH hydrolase	coord: 6..130 e-value: 1.8E-11 score: 46.0
None	No IPR available	PANTHER	PTHR45642	GDSL ESTERASE/LIPASE EXL3	coord: 6..130
None	No IPR available	PANTHER	PTHR45642:SF30	GDSL-LIKE LIPASE/ACYLHYDROLASE	coord: 6..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G007140.1	CmaCh02G007140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds