CmaCh02G006230 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G006230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5
Location	Cma_Chr02: 3756334 .. 3759242 (+)
RNA-Seq Expression	CmaCh02G006230
Synteny	CmaCh02G006230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAGGAAGTTTAAAGCGCCTGGATTCTGGTTTGCTCCTCTGCTTCAGTTTGGCATCAAATTCCGTGCGCCACAACGATTTCATTACCTAATCCAATCCCAATCTTCCACCTCACTGCAACGCCATTTTCATCGTCCTCATGACTCCGGCTTTGTCCTCCTCCTCCTCCTCCGCCGCCGCCTCCCAGCGGCTTATCCGCTGCACTGCTTCGCTGTGGCGAACTCACGCGCCCCACCGCTCTCCCTCGATGTCTCCTCCGCCGAGGAAGCTGAAACTAATGGCGGAGATAATGGTCAAGGCTAAGTATGCGGTTCTCGAACGGGACGATTACGACGACGTCAGGTGTGAGAAATGTCTCTCCGGCGACCGGGACGATGAGCTGCTGTTGTGTGACAAATGCGACAAGGGATTTCATATGAAATGTGTGAGTCCGATCGTTGCTAGGGTCCCGATTGGATCCTGGCTTTGCCCCAAATGCTGTGGCCAAAAAAGAGTAAGAAGTAAGAATATTCTCGAACTTGTTGATTCTTGATTCTTGATTTGTTTTTTTTTTGTCAACTTCGTAAGGTGTATAATCTTTGGACTGTCAACGTGTTCGAATTCCATTCTTCATTTTTTTTAAAATTTTGCTTGTAGGTTTTTCTCAGAAGAAGATTATCGATTTTTTCCGAATTCAGAAATGTAAAGACGCAGAATCTCTATATCTATCCGCTCAAGGTAAATTCTTGATTACAGTGTTCAAAATTCATATGATCTTATGTTTGTTTTATAATCTTGATCACGATCGTGCTCCTGATATTCAATAATATGGGATAGTTATGATATACTTTCTATATATCTGCTCAAATTGTTATTCCTTTCGTAGACATTTCCCTTTACAGTCAATTTTAATTGTTTAAAAGCTAGAATATGGTTCTTGAAGCGACATCCCAGATGAATTCCAGAGAAGAAGATCATCTCATATTCTTCCTTATACTTAATTGAATATGCCGAGATTAAGTCATAGAAATTCTTTAAACAACAAGGAGTTCACCTGATTCTTGTGGTTACTTTAAGTTTAGCTGCTTATGAAGGAGACATACTAAATGTTTATGCTTTATATAACACATGCTGTAAGACCATTAGATGTTCAAATATAAATCTTCTAAGTACTCTGCTGAAATTTTTCTACACCATAGGTGTTCCTGAACTGTTCATTTCATGTTGGTCGGTTTTCTTTTAATATTCCTTTTGTTGTACCTTTAATGCCACAATAAAAAATGTTATGATACCACTTGTTGTAGCGTTGGAAGCCACAAATAAAAAGCTTTGATTTGCAATTATGTGAAGTTATTGTCATTTTGTATTTACTTAGAGACAATTGGGAGGAACTTTGTTGAGAGACTTTGTAGTGCGAGAGAGTGTGAGAGATAACTTGTAAACACTTTGGTTATAGTGATTGGCTACATGGATGTAGGGGAATTTCTTCTTTCCGAACTACGTAAATCTTTGTGTCTCTTTGTTTAATATATATTGATGGGTGTGTGAGTGCAATCGATCTTACGTCCGCTTCCGTTACAACAATTGGTATCCGAGAATTTTGTGGCACTTAGGGTAAAACACCTTTCATTTAGACTTATTCATGGTTTCATTGTTTTTAATATTATACAAATGGTATCGTGAACTGAAGCTATAAAGCATAGGAGACGACTACGGTCATTGGTGTGGCAGAAGAAAAGGAGAAGATTACTATCATTTCTTCCAAGTGAAGATCCTGATCGCAGATTGAAACAGATGGGTTCACTTGCTGCAGCTTTAACAACATTGCAAATGGAGTTCAGTGATGATCTGACATATTTGCCGGGCATGGCTTCAAGATCTGCTAACCAGGCAGAGCTTGAAGATGGTGGAATGCAGGTTTAAATACTCATCTGTTGTTATTGACTGAGCTAAGAGTGGAATGGTCATAAATTATGACATCTATCTGCCTTCTGTTGTAGGTTCTTTCCAAAGAGGATATTGAGACTTTTGAACTCTGCAGAACCATGAGCAGAAGAGGCGAATGTGCTCCCCTTTTGGTAGTTTTTGATTCCTGTGAAGGGTAACTTTATTTTGAGCTTCTTAATCATATTCCCATATGATTCTAACCTCTCTACTGAGTAGGTCCATGCTCAATCTATGATGTAGTTTTACTGTACAAGCCGATGATCAAATTAAGGATATGACTTTTATTGCTGAATATACTGGTGATGTCGATTATCTTACAAACCGCGAACACGATGATTGTGATAGTATGATGACCCTTCTTTCAGCCAAACATCCATCTAGAAGTCTTGTCATCTGCCCTGACACACATGGAAACATTGCTCGCTTCATCAATGGAATAAATAATCATACTCCGTAAGTTGAACAAGGCTACCACATTGTCTTTTATACGTTTATATACTCGTGTTCATTCATATCAGCCTTCATGTCTGTGGAGATAGAGACTGAGTTATGCACATATTGATATCTTCTTTTAGTTTATGTAATATTTGAGAGAATGAAATTGTTGATATTCCATTTTTGTGCAGAGAAGGTAAGAAGAAACAGAACTGTAAATGTGTGAGATACAATGTTAAGGGCGAATGCCGTGTGATTTTGGTTGCGATTCGGGATATTGCTAAAGGGGAGAGGCTTTATTATGACTACAACGGATATGAGTATGAATACCCCACCCATCATTTTCTCTGAGAATTTCTTAGGATAAGTCTAACAACTTTGGGATCTGATTTGTGTGTCCCATACAGTTTTTTCACCATTTTTCCTTCTTCTTCTGCTGAATCTTGTTGCAAAGTCAACAGTTTTTGCTGATTCTACCAAAGTAATTTGTATTGCATACCCTCGGCCGAGGTCGAGGCTCGGACCAACCAGGCCAGGGAGGGGGTGGG

mRNA sequence

ATCAGGAAGTTTAAAGCGCCTGGATTCTGGTTTGCTCCTCTGCTTCAGTTTGGCATCAAATTCCGTGCGCCACAACGATTTCATTACCTAATCCAATCCCAATCTTCCACCTCACTGCAACGCCATTTTCATCGTCCTCATGACTCCGGCTTTGTCCTCCTCCTCCTCCTCCGCCGCCGCCTCCCAGCGGCTTATCCGCTGCACTGCTTCGCTGTGGCGAACTCACGCGCCCCACCGCTCTCCCTCGATGTCTCCTCCGCCGAGGAAGCTGAAACTAATGGCGGAGATAATGGTCAAGGCTAAGTATGCGGTTCTCGAACGGGACGATTACGACGACGTCAGGTGTGAGAAATGTCTCTCCGGCGACCGGGACGATGAGCTGCTGTTGTGTGACAAATGCGACAAGGGATTTCATATGAAATGTGTGAGTCCGATCGTTGCTAGGGTCCCGATTGGATCCTGGCTTTGCCCCAAATGCTGTGGCCAAAAAAGAGTAAGAAGTTTTTCTCAGAAGAAGATTATCGATTTTTTCCGAATTCAGAAATGTAAAGACGCAGAATCTCTATATCTATCCGCTCAAGCTATAAAGCATAGGAGACGACTACGGTCATTGGTGTGGCAGAAGAAAAGGAGAAGATTACTATCATTTCTTCCAAGTGAAGATCCTGATCGCAGATTGAAACAGATGGGTTCACTTGCTGCAGCTTTAACAACATTGCAAATGGAGTTCAGTGATGATCTGACATATTTGCCGGGCATGGCTTCAAGATCTGCTAACCAGGCAGAGCTTGAAGATGGTGGAATGCAGGTTCTTTCCAAAGAGGATATTGAGACTTTTGAACTCTGCAGAACCATGAGCAGAAGAGGCGAATGTGCTCCCCTTTTGGTAGTTTTTGATTCCTGTGAAGGTTTTACTGTACAAGCCGATGATCAAATTAAGGATATGACTTTTATTGCTGAATATACTGGTGATGTCGATTATCTTACAAACCGCGAACACGATGATTGTGATAGTATGATGACCCTTCTTTCAGCCAAACATCCATCTAGAAGTCTTGTCATCTGCCCTGACACACATGGAAACATTGCTCGCTTCATCAATGGAATAAATAATCATACTCCAGAAGGTAAGAAGAAACAGAACTGTAAATGTGTGAGATACAATGTTAAGGGCGAATGCCGTGTGATTTTGGTTGCGATTCGGGATATTGCTAAAGGGGAGAGGCTTTATTATGACTACAACGGATATGAGTATGAATACCCCACCCATCATTTTCTCTGAGAATTTCTTAGGATAAGTCTAACAACTTTGGGATCTGATTTGTGTGTCCCATACAGTTTTTTCACCATTTTTCCTTCTTCTTCTGCTGAATCTTGTTGCAAAGTCAACAGTTTTTGCTGATTCTACCAAAGTAATTTGTATTGCATACCCTCGGCCGAGGTCGAGGCTCGGACCAACCAGGCCAGGGAGGGGGTGGG

Coding sequence (CDS)

ATGACTCCGGCTTTGTCCTCCTCCTCCTCCTCCGCCGCCGCCTCCCAGCGGCTTATCCGCTGCACTGCTTCGCTGTGGCGAACTCACGCGCCCCACCGCTCTCCCTCGATGTCTCCTCCGCCGAGGAAGCTGAAACTAATGGCGGAGATAATGGTCAAGGCTAAGTATGCGGTTCTCGAACGGGACGATTACGACGACGTCAGGTGTGAGAAATGTCTCTCCGGCGACCGGGACGATGAGCTGCTGTTGTGTGACAAATGCGACAAGGGATTTCATATGAAATGTGTGAGTCCGATCGTTGCTAGGGTCCCGATTGGATCCTGGCTTTGCCCCAAATGCTGTGGCCAAAAAAGAGTAAGAAGTTTTTCTCAGAAGAAGATTATCGATTTTTTCCGAATTCAGAAATGTAAAGACGCAGAATCTCTATATCTATCCGCTCAAGCTATAAAGCATAGGAGACGACTACGGTCATTGGTGTGGCAGAAGAAAAGGAGAAGATTACTATCATTTCTTCCAAGTGAAGATCCTGATCGCAGATTGAAACAGATGGGTTCACTTGCTGCAGCTTTAACAACATTGCAAATGGAGTTCAGTGATGATCTGACATATTTGCCGGGCATGGCTTCAAGATCTGCTAACCAGGCAGAGCTTGAAGATGGTGGAATGCAGGTTCTTTCCAAAGAGGATATTGAGACTTTTGAACTCTGCAGAACCATGAGCAGAAGAGGCGAATGTGCTCCCCTTTTGGTAGTTTTTGATTCCTGTGAAGGTTTTACTGTACAAGCCGATGATCAAATTAAGGATATGACTTTTATTGCTGAATATACTGGTGATGTCGATTATCTTACAAACCGCGAACACGATGATTGTGATAGTATGATGACCCTTCTTTCAGCCAAACATCCATCTAGAAGTCTTGTCATCTGCCCTGACACACATGGAAACATTGCTCGCTTCATCAATGGAATAAATAATCATACTCCAGAAGGTAAGAAGAAACAGAACTGTAAATGTGTGAGATACAATGTTAAGGGCGAATGCCGTGTGATTTTGGTTGCGATTCGGGATATTGCTAAAGGGGAGAGGCTTTATTATGACTACAACGGATATGAGTATGAATACCCCACCCATCATTTTCTCTGA

Protein sequence

MTPALSSSSSSAAASQRLIRCTASLWRTHAPHRSPSMSPPPRKLKLMAEIMVKAKYAVLERDDYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKCCGQKRVRSFSQKKIIDFFRIQKCKDAESLYLSAQAIKHRRRLRSLVWQKKRRRLLSFLPSEDPDRRLKQMGSLAAALTTLQMEFSDDLTYLPGMASRSANQAELEDGGMQVLSKEDIETFELCRTMSRRGECAPLLVVFDSCEGFTVQADDQIKDMTFIAEYTGDVDYLTNREHDDCDSMMTLLSAKHPSRSLVICPDTHGNIARFINGINNHTPEGKKKQNCKCVRYNVKGECRVILVAIRDIAKGERLYYDYNGYEYEYPTHHFL

Homology

[Close]

BLAST of CmaCh02G006230 vs. ExPASy Swiss-Prot
Match: B9RU15 (Probable Histone-lysine N-methyltransferase ATXR5 OS=Ricinus communis OX=3988 GN=ATXR5 PE=1 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.8e-151
Identity = 274/381 (71.92%), Postives = 308/381 (80.84%), Query Frame = 0


Query: 1   MTPALSSSSSSAAASQRLIRCTASLWRTHAPHRSPSMSPPPRKLKLMAEIMVKAKYAVLE 60
           M PA  +++++ A      R   S  RT A   SP  SPPP+KLK ++EI+ KA+YAV+E
Sbjct: 1   MAPASITTTTTVAR-----RIVGSRRRTKA--TSPPDSPPPKKLKPISEILAKAQYAVVE 60

Query: 61  RDDYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKCCGQKRVR 120
           R DY DV C +C SG+R +ELLLCDKCDKGFHMKCV PIV RVPIGSWLCPKC GQ+RVR
Sbjct: 61  RADYGDVSCMQCGSGERAEELLLCDKCDKGFHMKCVRPIVVRVPIGSWLCPKCSGQRRVR 120

Query: 121 SFSQKKIIDFFRIQKCKDAESLYLSAQAI-KHRRRLRSLVWQKKRRRLLSFLPSEDPDRR 180
             SQ+KIIDFFRIQKC        S Q I KHRRR  SLV+QK+RRRLL F+ SEDP +R
Sbjct: 121 RLSQRKIIDFFRIQKCNHKTDKCSSPQDIRKHRRRSGSLVYQKRRRRLLPFVSSEDPAQR 180

Query: 181 LKQMGSLAAALTTLQMEFSDDLTYLPGMASRSANQAELEDGGMQVLSKEDIETFELCRTM 240
           LKQMG+LA+ALT LQMEFSDDLTY  GMA RSANQA  E+GGMQVL+KEDIET E CR M
Sbjct: 181 LKQMGTLASALTELQMEFSDDLTYSSGMAPRSANQARFEEGGMQVLTKEDIETLEQCRAM 240

Query: 241 SRRGECAPLLVVFDSCEGFTVQADDQIKDMTFIAEYTGDVDYLTNREHDDCDSMMTLLSA 300
            +RG+C PLLVVFDS EGFTV+AD QIKDMTFIAEYTGDVDY+ NREHDDCDSMMTLL A
Sbjct: 241 CKRGDCPPLLVVFDSREGFTVEADGQIKDMTFIAEYTGDVDYIRNREHDDCDSMMTLLLA 300

Query: 301 KHPSRSLVICPDTHGNIARFINGINNHTPEGKKKQNCKCVRYNVKGECRVILVAIRDIAK 360
           K PS+SLVICPD  GNIARFI+GINNHT +GKKKQNCKCVRY+V GECRV LVA RDIAK
Sbjct: 301 KDPSKSLVICPDKRGNIARFISGINNHTLDGKKKQNCKCVRYSVNGECRVFLVATRDIAK 360

Query: 361 GERLYYDYNGYEYEYPTHHFL 381
           GERLYYDYNGYE+EYPT HF+
Sbjct: 361 GERLYYDYNGYEHEYPTQHFV 374

[Close]

BLAST of CmaCh02G006230 vs. ExPASy Swiss-Prot
Match: Q8VZJ1 (Histone-lysine N-methyltransferase ATXR5 OS=Arabidopsis thaliana OX=3702 GN=ATXR5 PE=1 SV=2)

HSP 1 Score: 484.2 bits (1245), Expect = 1.4e-135
Identity = 246/380 (64.74%), Postives = 294/380 (77.37%), Query Frame = 0


Query: 8   SSSSAAASQRLIRCTASLWRTHAPHRSPSM-SPPPRKLKLMAEIMVKAKYAV-----LER 67
           ++SS AAS       +S  RT AP R PS  SPPPRK+K MAEIM K+   V      + 
Sbjct: 5   NASSPAASP-----CSSRRRTKAPARRPSSESPPPRKMKSMAEIMAKSVPVVEQEEEEDE 64

Query: 68  DDYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKCCGQKRVRS 127
           D Y +V CEKC SG+ DDELLLCDKCD+GFHMKC+ PIV RVPIG+WLC  C  Q+ VR 
Sbjct: 65  DSYSNVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCSDQRPVRR 124

Query: 128 FSQKKIIDFFRIQK-CKDAESLYLSAQAIKHRRRLRSLVWQKKRRRLLSFLPSEDPDRRL 187
            SQKKI+ FFRI+K     + L LS +  + RRR  SL  +K+RR+LL  +PSEDPD+RL
Sbjct: 125 LSQKKILHFFRIEKHTHQTDKLELSQEETRKRRRSCSLTVKKRRRKLLPLVPSEDPDQRL 184

Query: 188 KQMGSLAAALTTLQMEFSDDLTYLPGMASRSANQAELEDGGMQVLSKEDIETFELCRTMS 247
            QMG+LA+ALT L +++SD L Y+PGMA RSANQ++LE GGMQVL KED+ET E C++M 
Sbjct: 185 AQMGTLASALTALGIKYSDGLNYVPGMAPRSANQSKLEKGGMQVLCKEDLETLEQCQSMY 244

Query: 248 RRGECAPLLVVFDSCEGFTVQADDQIKDMTFIAEYTGDVDYLTNREHDDCDSMMTLLSAK 307
           RRGEC PL+VVFD  EG+TV+AD  IKD+TFIAEYTGDVDYL NRE DDCDS+MTLL ++
Sbjct: 245 RRGECPPLVVVFDPLEGYTVEADGPIKDLTFIAEYTGDVDYLKNREKDDCDSIMTLLLSE 304

Query: 308 HPSRSLVICPDTHGNIARFINGINNHTPEGKKKQNCKCVRYNVKGECRVILVAIRDIAKG 367
            PS++LVICPD  GNI+RFINGINNH P  KKKQNCKCVRY++ GECRV+LVA RDI+KG
Sbjct: 305 DPSKTLVICPDKFGNISRFINGINNHNPVAKKKQNCKCVRYSINGECRVLLVATRDISKG 364

Query: 368 ERLYYDYNGYEYEYPTHHFL 381
           ERLYYDYNGYE+EYPTHHFL
Sbjct: 365 ERLYYDYNGYEHEYPTHHFL 379

[Close]

BLAST of CmaCh02G006230 vs. ExPASy Swiss-Prot
Match: Q9FNE9 (Histone-lysine N-methyltransferase ATXR6 OS=Arabidopsis thaliana OX=3702 GN=ATXR6 PE=1 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 6.4e-109
Identity = 199/321 (61.99%), Postives = 238/321 (74.14%), Query Frame = 0


Query: 63  DYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKCCGQKRVRSF 122
           D+D V CE+C SG +  +LLLCDKCDKGFH+ C+ PI+  VP GSW CP C   +  +SF
Sbjct: 30  DWDTV-CEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSKHQIPKSF 89

Query: 123 S--QKKIIDFFRIQKCKDAESLYLSAQAIKHRRRLRSLVWQKKRRRLLSFLPSEDPDRRL 182
              Q KIIDFFRI++  D+  +  S+ +I  +R+  SLV  KK+RRLL + PS DP RRL
Sbjct: 90  PLIQTKIIDFFRIKRSPDSSQISSSSDSIGKKRKKTSLVMSKKKRRLLPYNPSNDPQRRL 149

Query: 183 KQMGSLAAALTTLQMEFSDDLTYLPGMASRSANQAELEDGGMQVLSKEDIETFELCRTMS 242
           +QM SLA AL     +FS++LTY+ G A RSANQA  E GGMQVLSKE +ET  LC+ M 
Sbjct: 150 EQMASLATALRASNTKFSNELTYVSGKAPRSANQAAFEKGGMQVLSKEGVETLALCKKMM 209

Query: 243 RRGECAPLLVVFDSCEGFTVQADDQIKDMTFIAEYTGDVDYLTNREHD-DCDSMMTLLSA 302
             GEC PL+VVFD  EGFTV+AD  IKD T I EY GDVDYL+NRE D D DSMMTLL A
Sbjct: 210 DLGECPPLMVVFDPYEGFTVEADRFIKDWTIITEYVGDVDYLSNREDDYDGDSMMTLLHA 269

Query: 303 KHPSRSLVICPDTHGNIARFINGINNHTPEGKKKQNCKCVRYNVKGECRVILVAIRDIAK 362
             PS+ LVICPD   NIARFI+GINNH+PEG+KKQN KCVR+N+ GE RV+LVA RDI+K
Sbjct: 270 SDPSQCLVICPDRRSNIARFISGINNHSPEGRKKQNLKCVRFNINGEARVLLVANRDISK 329

Query: 363 GERLYYDYNGYEYEYPTHHFL 381
           GERLYYDYNGYE+EYPT HF+
Sbjct: 330 GERLYYDYNGYEHEYPTEHFV 349

[Close]

BLAST of CmaCh02G006230 vs. ExPASy Swiss-Prot
Match: A6H619 (PHD and RING finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Phrf1 PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 4.7e-11
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 45  KLMAEIMVKAKYAVLERDDYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVP 104
           K++ +I V+   A  E ++ D   CE C   DR+D LLLCD CD G+HM+C+ P +  VP
Sbjct: 165 KILKKIPVENTKA-CEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVP 224

Query: 105 IGSWLCPKC 114
           +  W CP+C
Sbjct: 225 VDEWFCPEC 232

[Close]

BLAST of CmaCh02G006230 vs. ExPASy Swiss-Prot
Match: Q63625 (PHD and RING finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Phrf1 PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 60  ERDDYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKC 114
           E ++ D   CE C   DR+D LLLCD CD G+HM+C+ P +  VP+  W CP+C
Sbjct: 182 EAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 235

[Close]

BLAST of CmaCh02G006230 vs. TAIR 10
Match: AT5G09790.2 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 )

HSP 1 Score: 484.2 bits (1245), Expect = 9.7e-137
Identity = 246/380 (64.74%), Postives = 294/380 (77.37%), Query Frame = 0


Query: 8   SSSSAAASQRLIRCTASLWRTHAPHRSPSM-SPPPRKLKLMAEIMVKAKYAV-----LER 67
           ++SS AAS       +S  RT AP R PS  SPPPRK+K MAEIM K+   V      + 
Sbjct: 5   NASSPAASP-----CSSRRRTKAPARRPSSESPPPRKMKSMAEIMAKSVPVVEQEEEEDE 64

Query: 68  DDYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKCCGQKRVRS 127
           D Y +V CEKC SG+ DDELLLCDKCD+GFHMKC+ PIV RVPIG+WLC  C  Q+ VR 
Sbjct: 65  DSYSNVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCSDQRPVRR 124

Query: 128 FSQKKIIDFFRIQK-CKDAESLYLSAQAIKHRRRLRSLVWQKKRRRLLSFLPSEDPDRRL 187
            SQKKI+ FFRI+K     + L LS +  + RRR  SL  +K+RR+LL  +PSEDPD+RL
Sbjct: 125 LSQKKILHFFRIEKHTHQTDKLELSQEETRKRRRSCSLTVKKRRRKLLPLVPSEDPDQRL 184

Query: 188 KQMGSLAAALTTLQMEFSDDLTYLPGMASRSANQAELEDGGMQVLSKEDIETFELCRTMS 247
            QMG+LA+ALT L +++SD L Y+PGMA RSANQ++LE GGMQVL KED+ET E C++M 
Sbjct: 185 AQMGTLASALTALGIKYSDGLNYVPGMAPRSANQSKLEKGGMQVLCKEDLETLEQCQSMY 244

Query: 248 RRGECAPLLVVFDSCEGFTVQADDQIKDMTFIAEYTGDVDYLTNREHDDCDSMMTLLSAK 307
           RRGEC PL+VVFD  EG+TV+AD  IKD+TFIAEYTGDVDYL NRE DDCDS+MTLL ++
Sbjct: 245 RRGECPPLVVVFDPLEGYTVEADGPIKDLTFIAEYTGDVDYLKNREKDDCDSIMTLLLSE 304

Query: 308 HPSRSLVICPDTHGNIARFINGINNHTPEGKKKQNCKCVRYNVKGECRVILVAIRDIAKG 367
            PS++LVICPD  GNI+RFINGINNH P  KKKQNCKCVRY++ GECRV+LVA RDI+KG
Sbjct: 305 DPSKTLVICPDKFGNISRFINGINNHNPVAKKKQNCKCVRYSINGECRVLLVATRDISKG 364

Query: 368 ERLYYDYNGYEYEYPTHHFL 381
           ERLYYDYNGYE+EYPTHHFL
Sbjct: 365 ERLYYDYNGYEHEYPTHHFL 379

[Close]

BLAST of CmaCh02G006230 vs. TAIR 10
Match: AT5G09790.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 )

HSP 1 Score: 452.6 bits (1163), Expect = 3.1e-127
Identity = 234/379 (61.74%), Postives = 279/379 (73.61%), Query Frame = 0


Query: 8   SSSSAAASQRLIRCTASLWRTHAPHRSPSM-SPPPRKLKLMAEIMVKAKYAV-----LER 67
           ++SS AAS       +S  RT AP R PS  SPPPRK+K MAEIM K+   V      + 
Sbjct: 5   NASSPAASP-----CSSRRRTKAPARRPSSESPPPRKMKSMAEIMAKSVPVVEQEEEEDE 64

Query: 68  DDYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKCCGQKRVRS 127
           D Y +V CEKC SG+ DDELLLCDKCD+GFHMKC+ PIV RVPIG+WLC  C  Q+ VR 
Sbjct: 65  DSYSNVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCSDQRPVRK 124

Query: 128 FSQKKIIDFFRIQKCKDAESLYLSAQAIKHRRRLRSLVWQKKRRRLLSFLPSEDPDRRLK 187
            ++K                          RRR  SL  +K+RR+LL  +PSEDPD+RL 
Sbjct: 125 ETRK--------------------------RRRSCSLTVKKRRRKLLPLVPSEDPDQRLA 184

Query: 188 QMGSLAAALTTLQMEFSDDLTYLPGMASRSANQAELEDGGMQVLSKEDIETFELCRTMSR 247
           QMG+LA+ALT L +++SD L Y+PGMA RSANQ++LE GGMQVL KED+ET E C++M R
Sbjct: 185 QMGTLASALTALGIKYSDGLNYVPGMAPRSANQSKLEKGGMQVLCKEDLETLEQCQSMYR 244

Query: 248 RGECAPLLVVFDSCEGFTVQADDQIKDMTFIAEYTGDVDYLTNREHDDCDSMMTLLSAKH 307
           RGEC PL+VVFD  EG+TV+AD  IKD+TFIAEYTGDVDYL NRE DDCDS+MTLL ++ 
Sbjct: 245 RGECPPLVVVFDPLEGYTVEADGPIKDLTFIAEYTGDVDYLKNREKDDCDSIMTLLLSED 304

Query: 308 PSRSLVICPDTHGNIARFINGINNHTPEGKKKQNCKCVRYNVKGECRVILVAIRDIAKGE 367
           PS++LVICPD  GNI+RFINGINNH P  KKKQNCKCVRY++ GECRV+LVA RDI+KGE
Sbjct: 305 PSKTLVICPDKFGNISRFINGINNHNPVAKKKQNCKCVRYSINGECRVLLVATRDISKGE 352

Query: 368 RLYYDYNGYEYEYPTHHFL 381
           RLYYDYNGYE+EYPTHHFL
Sbjct: 365 RLYYDYNGYEHEYPTHHFL 352

[Close]

BLAST of CmaCh02G006230 vs. TAIR 10
Match: AT5G24330.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 )

HSP 1 Score: 395.6 bits (1015), Expect = 4.5e-110
Identity = 199/321 (61.99%), Postives = 238/321 (74.14%), Query Frame = 0


Query: 63  DYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKCCGQKRVRSF 122
           D+D V CE+C SG +  +LLLCDKCDKGFH+ C+ PI+  VP GSW CP C   +  +SF
Sbjct: 30  DWDTV-CEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSKHQIPKSF 89

Query: 123 S--QKKIIDFFRIQKCKDAESLYLSAQAIKHRRRLRSLVWQKKRRRLLSFLPSEDPDRRL 182
              Q KIIDFFRI++  D+  +  S+ +I  +R+  SLV  KK+RRLL + PS DP RRL
Sbjct: 90  PLIQTKIIDFFRIKRSPDSSQISSSSDSIGKKRKKTSLVMSKKKRRLLPYNPSNDPQRRL 149

Query: 183 KQMGSLAAALTTLQMEFSDDLTYLPGMASRSANQAELEDGGMQVLSKEDIETFELCRTMS 242
           +QM SLA AL     +FS++LTY+ G A RSANQA  E GGMQVLSKE +ET  LC+ M 
Sbjct: 150 EQMASLATALRASNTKFSNELTYVSGKAPRSANQAAFEKGGMQVLSKEGVETLALCKKMM 209

Query: 243 RRGECAPLLVVFDSCEGFTVQADDQIKDMTFIAEYTGDVDYLTNREHD-DCDSMMTLLSA 302
             GEC PL+VVFD  EGFTV+AD  IKD T I EY GDVDYL+NRE D D DSMMTLL A
Sbjct: 210 DLGECPPLMVVFDPYEGFTVEADRFIKDWTIITEYVGDVDYLSNREDDYDGDSMMTLLHA 269

Query: 303 KHPSRSLVICPDTHGNIARFINGINNHTPEGKKKQNCKCVRYNVKGECRVILVAIRDIAK 362
             PS+ LVICPD   NIARFI+GINNH+PEG+KKQN KCVR+N+ GE RV+LVA RDI+K
Sbjct: 270 SDPSQCLVICPDRRSNIARFISGINNHSPEGRKKQNLKCVRFNINGEARVLLVANRDISK 329

Query: 363 GERLYYDYNGYEYEYPTHHFL 381
           GERLYYDYNGYE+EYPT HF+
Sbjct: 330 GERLYYDYNGYEHEYPTEHFV 349

[Close]

BLAST of CmaCh02G006230 vs. TAIR 10
Match: AT3G01460.1 (methyl-CPG-binding domain 9 )

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-09
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 42   RKLK-LMAEIMVKAKYAV-----LERDDYDDVRCEKCLSGDRDDELLLCDKCDKGFHMKC 101
            RKL+ L AE+  + K  V     L +  +D+  C+ C     DD +LLCD CD  +H  C
Sbjct: 1257 RKLECLSAEMKKEIKDIVVSVNKLPKAPWDEGVCKVCGVDKDDDSVLLCDTCDAEYHTYC 1316

Query: 102  VSPIVARVPIGSWLCPKCCGQKRV 120
            ++P + R+P G+W CP C   KR+
Sbjct: 1317 LNPPLIRIPDGNWYCPSCVIAKRM 1340

[Close]

BLAST of CmaCh02G006230 vs. TAIR 10
Match: AT1G77250.1 (RING/FYVE/PHD-type zinc finger family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07
Identity = 23/62 (37.10%), Postives = 33/62 (53.23%), Query Frame = 0


Query: 69  CEKCLSGDRDDELLLCDKCDKGFHMKCVSPIVARVPIGSWLCPKCCG-----QKRVRSFS 126
           C  CL+   DD+++LCD CD  +H+ C+ P    VP G W C  C       QK  ++F 
Sbjct: 405 CRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVPNGEWFCTACKAAILKVQKARKAFE 464

The following BLAST results are available for this feature:

BLAST of CmaCh02G006230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9RU15	1.8e-151	71.92	Probable Histone-lysine N-methyltransferase ATXR5 OS=Ricinus communis OX=3988 GN...	[more]
Q8VZJ1	1.4e-135	64.74	Histone-lysine N-methyltransferase ATXR5 OS=Arabidopsis thaliana OX=3702 GN=ATXR...	[more]
Q9FNE9	6.4e-109	61.99	Histone-lysine N-methyltransferase ATXR6 OS=Arabidopsis thaliana OX=3702 GN=ATXR...	[more]
A6H619	4.7e-11	43.48	PHD and RING finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Phrf...	[more]
Q63625	8.0e-11	48.15	PHD and RING finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN...	[more]

BLAST of CmaCh02G006230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09790.2	9.7e-137	64.74	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5	[more]
AT5G09790.1	3.1e-127	61.74	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5	[more]
AT5G24330.1	4.5e-110	61.99	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6	[more]
AT3G01460.1	4.5e-09	38.10	methyl-CPG-binding domain 9	[more]
AT1G77250.1	1.5e-07	37.10	RING/FYVE/PHD-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 68..114 e-value: 1.5E-10 score: 51.1
IPR001214	SET domain	SMART	SM00317	set_7	coord: 246..374 e-value: 4.3E-4 score: 29.6
IPR001214	SET domain	PFAM	PF00856	SET	coord: 270..368 e-value: 1.7E-7 score: 31.8
IPR001214	SET domain	PROSITE	PS50280	SET	coord: 231..368 score: 13.692865
None	No IPR available	GENE3D	2.170.270.10	SET domain	coord: 152..380 e-value: 6.7E-73 score: 247.2
None	No IPR available	PANTHER	PTHR10615	HISTONE ACETYLTRANSFERASE	coord: 12..377
None	No IPR available	PANTHER	PTHR10615:SF170	HISTONE-LYSINE N-METHYLTRANSFERASE ATXR5	coord: 12..377
None	No IPR available	CDD	cd10539	SET_ATXR5_6-like	coord: 243..380 e-value: 9.09242E-94 score: 275.058
None	No IPR available	SUPERFAMILY	82199	SET domain	coord: 240..369
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 4..128 e-value: 5.4E-18 score: 67.1
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 68..114 e-value: 3.9E-10 score: 39.5
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 66..116 score: 9.8727
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 69..113
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 58..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G006230.1	CmaCh02G006230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0005515	protein binding