CmaCh02G006070 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G006070
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr02: 3634986 .. 3639076 (+)
RNA-Seq ExpressionCmaCh02G006070
SyntenyCmaCh02G006070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGTTTTGAACCCTTTCGAATCCTTTTGAAATATGTTATTGCGGGTTCTAACCGTTGGGATCTTTCTGCTTATAGCTTTGAACCAATTCGAGCTCAATTGAATACTTTCCAGCACGAAATTGAGTTCGTTCCTTCAAGTTTTGGTGGTAAGACTCAGTCTAGACCTTTTCGAGCCATTTTTAAGTGCCTTAGCTTAGTCTCTTACACTTCGAAAGCTCTCTTTTTTAGGTTCAAATTAGTTCTGGACCGTCAAATCAAGTCTGGGGGTGATTTGTGGTTAAGATTTTCCTTTTTGGTCACTCACTTAGATTCAACTAAGGTTTTTGAATTAAGTCTAACCTTATGATGTTGTTTTTATTGTTTAGGAACATTTTCAGATTGATTTAGGAAATGCTTTAGCACTTTAGGTAAGCAGTTTCTATCTATTGAGTTTGATTGCTGTTTGGCTTTAATTGTTTTATTAAGTATATTTTATTGAACTCTTTTTCTATATGTTAAGTTCTGAATATGTTGGACGTGTAGTTGTAATTTGTAATGTTAAGCATGATGGGGTGCTTGTGGTGCTTCAGTGATGCTTAGCATGATGAGATGTTGTGATTTGATCCTAAGTAGACAAGCATGCTGTAGAGTTGAGATTGTTTGAAAAAGAATGTTGGTTGTGTTAAGAGCACGTCTATGTAATTTTTGGTGAAGTTCTTCGGTTGGGAAATAGCCATAAAGCCATTAGCACAAGTGAATCTACAAAAAAGAATGCCCTGGATGACTCTATTTCTAAGTTGGTGCCCCCCTATGCAAAAGAAAAAAACAAAAAAACAAAAAAAAAAAAACAATCACAAAGTCACTTATTTATGCAATGCACATACTCTTAATATTTTTGGAAAAGGATTTTCAATACTTTTGGATGACACCTCACTTTTCATATGGAGATAAGGATTTATTGAATATAACCTTATTAATGTACCACCTTTTCAAGAATGCAAAAGCCTTGCTATGGAAAAATCTCATTATGATTTCTTTGGACTCTGCGGAAAGAAAGAAATTAAAGAGTATTCACAGAGAAGGCACAAACTTATACAAAACTCTTCAATAATGTTGTTTTCCATTCTATATCTTAGTGTAAATTGCCTAGCACTTTTACTTCCGGTAGTCACACCTCCCTCATTGTAAATTGGGAAGTCTTTTTTTGTTTTTTTTTTTGTTTTGGTAAACATCATGCATAACACATCCCTTTTGTAAATTTCAAACATCAACGAAATTGTTTCTTGTAAAAAAAAAGGTATGATTTTGACATCGTTTTGTAGTTTTGAATGTTTTTTTTTTGTTTGGCTGAATCTTTGTCATACTTTCTCTCACTTAAACTCCTGTACTAAATTTAATATATGTTTTGATTGGTAGTGTTGCAATATTTCACATTTCTTCTCATTTTAAACTCATGGTTTTACTCTTGACCTCAATCTGCTCATTCCTGGTATTTGTTTTTGTTTTTTAGGCACTTTTATCGTGAAAGCAACTATGAGAAATCATTCACCAACTTCTCCATTCCTTCTCTACTCCCACTTAAAAAACAAGCCTCTTGGTTTGAAATCAGAAATTGCAGGAAAAACTATCTTACATTTATCATCTTCTGGGCATATCAATCAAAGCACGGATGCTTTGGTGGAAACCTCGTCTAAAGTGGCCTCGCAGAGTAACTTAGTTGCTTTAGAGTCCATCAATGGTAAATGTGGTACCTCACCCGATTTTGCTTTAACTGAAAGTCATGTGATAAACACTCTTCTAGGCAACATAAGTGACCCAAAATCAGCATTGGAGTACTTCAAAAGGATTGAGAAGAAGAGTGGTTATGTCAAGAGCACTAATGCTATATCTGTCCTGCTTCTCATTTTGATGAATTCGGCAGAGACCCAGAAAATAGCTCAGAATATGCTCAATCGGTTTGCGTCAGGAAATTCAGTCTCCTCTAGTTGTCTTATAAACGGTTTAGTAGAATGCATGAAGCTGTACAGTTTTCCATCAGATATCCAGGTTTTTAATTATTTATTGAATAGTTACGTTAGAGCTTACAAAATTGAAGAAGCTCTTCATTGTTTTAATAAAATGGTAGAATTTGATGTAAAGCCATCAATTCAGTGTATGAATATTCTTTTGACTGCTATGGTTAGGAAAAACATGATTTGTGAAGCACGGGAGTTGCATAACAAAATGTTGCTGGAAGGAGTTGCAGGTAACTGTTTTACTCTGCATGTTATGATGCGTGCTTGTTTGAAGGAAATAAATATTGTGGAGGCAGAGCAGCATTTTTTAGAAGCAAAAGCAAGAGGAGTGAAACTTGATCCACAAGCATATAGTACTTTTATCCATGTAGTTTGTTTGAAACCGAATTCTGGATATGCTTTGTCTTTGTTAAGAGAGATGAGAGCTACAGGTTGGGTTCCTTCTGAGGGCACATTTACAAGTGTTATTACTGCTTGTGTGAAGGAAGGAAATATGGTAGAGGCTTTGCGGCTGAAAGATGACATGGTTAATTGTGGGAAGTCTATGAATTTGGCTGTTAAAACAAGTTTAATAAAGGGTTATTGCATGCAAGGAGACCTGAGTAGTGCTCTAGATCTTGTGAATGAAATTTATAACTGTGGTTTGGTTCCCAACAGAGTTACGTACTCAGTTATGATTGATGGTTTCTGTAAGAACGGGTGCATGGAAAAGGCATATGAATTTTACTCTGAGATGAAAATTAAGGGCATCAAGCCAAGTGTTTATTCTTTGAATTCTATGATACAAGGGTATTTGAAATGCCAGTCTTTGCAGAATGCATTCACGATGTTTGATGAAGCAGTTGAGAGTGGTCTTGCAAATGTTTTCACGTTTAATACTTTATTATCGTGGCTTTGTAAGGAGGGTAAGGTAAATGAAGCTTGCAATTTCTGGGATGAGGTGATTGTTAAGGGTATCAGTCCTAATGCCGTTTCTTACAATACCATGATACTCGGTCATTGTAGAAAAGGTAATGTTATTGAAGCATGTAAGGTGTACAAGGAGATGCAAGATAATGGTTTTACCCCAAATGTTGTTACCTTTTCTATTCTAATGGACGGTTATTTCAAGAAAGGTGATATTGACAATGCTTTTAGTATATTTCACAAGATGATAGATGCTAATATTCTCCCCACAGACATCACTTTAGGCATTATTATCAAAGGTTTGTGCAAAGCTGGTCGTACTTCGGAGGGAAGGGATATGTTCAATAAGTTTGTTTCTGAAGGTTCTATTCCTACATGTGTAGCTTACAATACTATTATTGATGGTTTCATCAAGGAAGGTGACATTAATTTGGCCTTGAATGTATTTAGGGAAATGTGTGAAGTTGGCATTTCTCCTAGTATTGTTACCTACACGTCCTTAATTGATGGGTTTTGTAAAAGTAATAATATAGATCTTGCTTTAAAGTTGTTGAATGATATGAAAAGGAAGGGTCTTGAAATGGACATTACGGCATATGGCACACTTATTGACAGTTTTTGCAAAAGAAGGGATATGAAAAGTGCATGTGAACTTTATAATGAACTTCTTGGAGCTGGTTTATCTCCAAATGTTGTTATCTACAATAGCATGATTACTGGGTTTAAGAATCTAAACAACATGAAAGCAGCAATTGACTTATATAAGAACATGGTGAATGAGGGGATTCCATGTGATTTGCAAACTTATACCTCATTGATTGACGGACTCCTGAAAGAAGGAAGACTTCTTTATGCATCTGATCTCTACACTGAAATGCTTTCCAAGGGTATTTCGCCTGATAATCGAGCACAAACAGTTCTCATCACTGGTCTTTGTAACAAAGGACAATTAGAAAATGCACGCAAGATTTTGGAAGAGATGAATGGAAGAAACTTGACTCCTAGTGTTCTCATTTATAACACATTAATAGCTGGACACTTTAAGGAAGGAAATTTGCAAGAGGCTTTTAGGTTGCATGATGAGATGCTGGGTAGAGGTCTTGTTCCTGATAACACTACGTATGATATTCTTGTCAACGGAAAGTTCAAAGGAGATTGTACTTTTAATAGAGATTTGAGTTTCTAA

mRNA sequence

ATGAGGAGTTTTGAACCCTTTCGAATCCTTTTGAAATATGTTATTGCGGGTTCTAACCGTTGGGATCTTTCTGCTTATAGCTTTGAACCAATTCGAGCTCAATTGAATACTTTCCAGCACGAAATTGAGTTCGTTCCTTCAAGTTTTGGTGGCACTTTTATCGTGAAAGCAACTATGAGAAATCATTCACCAACTTCTCCATTCCTTCTCTACTCCCACTTAAAAAACAAGCCTCTTGGTTTGAAATCAGAAATTGCAGGAAAAACTATCTTACATTTATCATCTTCTGGGCATATCAATCAAAGCACGGATGCTTTGGTGGAAACCTCGTCTAAAGTGGCCTCGCAGAGTAACTTAGTTGCTTTAGAGTCCATCAATGGTAAATGTGGTACCTCACCCGATTTTGCTTTAACTGAAAGTCATGTGATAAACACTCTTCTAGGCAACATAAGTGACCCAAAATCAGCATTGGAGTACTTCAAAAGGATTGAGAAGAAGAGTGGTTATGTCAAGAGCACTAATGCTATATCTGTCCTGCTTCTCATTTTGATGAATTCGGCAGAGACCCAGAAAATAGCTCAGAATATGCTCAATCGGTTTGCGTCAGGAAATTCAGTCTCCTCTAGTTGTCTTATAAACGGTTTAGTAGAATGCATGAAGCTGTACAGTTTTCCATCAGATATCCAGGTTTTTAATTATTTATTGAATAGTTACGTTAGAGCTTACAAAATTGAAGAAGCTCTTCATTGTTTTAATAAAATGGTAGAATTTGATGTAAAGCCATCAATTCAGTGTATGAATATTCTTTTGACTGCTATGGTTAGGAAAAACATGATTTGTGAAGCACGGGAGTTGCATAACAAAATGTTGCTGGAAGGAGTTGCAGGTAACTGTTTTACTCTGCATGTTATGATGCGTGCTTGTTTGAAGGAAATAAATATTGTGGAGGCAGAGCAGCATTTTTTAGAAGCAAAAGCAAGAGGAGTGAAACTTGATCCACAAGCATATAGTACTTTTATCCATGTAGTTTGTTTGAAACCGAATTCTGGATATGCTTTGTCTTTGTTAAGAGAGATGAGAGCTACAGGTTGGGTTCCTTCTGAGGGCACATTTACAAGTGTTATTACTGCTTGTGTGAAGGAAGGAAATATGGTAGAGGCTTTGCGGCTGAAAGATGACATGGTTAATTGTGGGAAGTCTATGAATTTGGCTGTTAAAACAAGTTTAATAAAGGGTTATTGCATGCAAGGAGACCTGAGTAGTGCTCTAGATCTTGTGAATGAAATTTATAACTGTGGTTTGGTTCCCAACAGAGTTACGTACTCAGTTATGATTGATGGTTTCTGTAAGAACGGGTGCATGGAAAAGGCATATGAATTTTACTCTGAGATGAAAATTAAGGGCATCAAGCCAAGTGTTTATTCTTTGAATTCTATGATACAAGGGTATTTGAAATGCCAGTCTTTGCAGAATGCATTCACGATGTTTGATGAAGCAGTTGAGAGTGGTCTTGCAAATGTTTTCACGTTTAATACTTTATTATCGTGGCTTTGTAAGGAGGGTAAGGTAAATGAAGCTTGCAATTTCTGGGATGAGGTGATTGTTAAGGGTATCAGTCCTAATGCCGTTTCTTACAATACCATGATACTCGGTCATTGTAGAAAAGGTAATGTTATTGAAGCATGTAAGGTGTACAAGGAGATGCAAGATAATGGTTTTACCCCAAATGTTGTTACCTTTTCTATTCTAATGGACGGTTATTTCAAGAAAGGTGATATTGACAATGCTTTTAGTATATTTCACAAGATGATAGATGCTAATATTCTCCCCACAGACATCACTTTAGGCATTATTATCAAAGGTTTGTGCAAAGCTGGTCGTACTTCGGAGGGAAGGGATATGTTCAATAAGTTTGTTTCTGAAGGTTCTATTCCTACATGTGTAGCTTACAATACTATTATTGATGGTTTCATCAAGGAAGGTGACATTAATTTGGCCTTGAATGTATTTAGGGAAATGTGTGAAGTTGGCATTTCTCCTAGTATTGTTACCTACACGTCCTTAATTGATGGGTTTTGTAAAAGTAATAATATAGATCTTGCTTTAAAGTTGTTGAATGATATGAAAAGGAAGGGTCTTGAAATGGACATTACGGCATATGGCACACTTATTGACAGTTTTTGCAAAAGAAGGGATATGAAAAGTGCATGTGAACTTTATAATGAACTTCTTGGAGCTGGTTTATCTCCAAATGTTGTTATCTACAATAGCATGATTACTGGGTTTAAGAATCTAAACAACATGAAAGCAGCAATTGACTTATATAAGAACATGGTGAATGAGGGGATTCCATGTGATTTGCAAACTTATACCTCATTGATTGACGGACTCCTGAAAGAAGGAAGACTTCTTTATGCATCTGATCTCTACACTGAAATGCTTTCCAAGGGTATTTCGCCTGATAATCGAGCACAAACAGTTCTCATCACTGGTCTTTGTAACAAAGGACAATTAGAAAATGCACGCAAGATTTTGGAAGAGATGAATGGAAGAAACTTGACTCCTAGTGTTCTCATTTATAACACATTAATAGCTGGACACTTTAAGGAAGGAAATTTGCAAGAGGCTTTTAGGTTGCATGATGAGATGCTGGGTAGAGGTCTTGTTCCTGATAACACTACGTATGATATTCTTGTCAACGGAAAGTTCAAAGGAGATTGTACTTTTAATAGAGATTTGAGTTTCTAA

Coding sequence (CDS)

ATGAGGAGTTTTGAACCCTTTCGAATCCTTTTGAAATATGTTATTGCGGGTTCTAACCGTTGGGATCTTTCTGCTTATAGCTTTGAACCAATTCGAGCTCAATTGAATACTTTCCAGCACGAAATTGAGTTCGTTCCTTCAAGTTTTGGTGGCACTTTTATCGTGAAAGCAACTATGAGAAATCATTCACCAACTTCTCCATTCCTTCTCTACTCCCACTTAAAAAACAAGCCTCTTGGTTTGAAATCAGAAATTGCAGGAAAAACTATCTTACATTTATCATCTTCTGGGCATATCAATCAAAGCACGGATGCTTTGGTGGAAACCTCGTCTAAAGTGGCCTCGCAGAGTAACTTAGTTGCTTTAGAGTCCATCAATGGTAAATGTGGTACCTCACCCGATTTTGCTTTAACTGAAAGTCATGTGATAAACACTCTTCTAGGCAACATAAGTGACCCAAAATCAGCATTGGAGTACTTCAAAAGGATTGAGAAGAAGAGTGGTTATGTCAAGAGCACTAATGCTATATCTGTCCTGCTTCTCATTTTGATGAATTCGGCAGAGACCCAGAAAATAGCTCAGAATATGCTCAATCGGTTTGCGTCAGGAAATTCAGTCTCCTCTAGTTGTCTTATAAACGGTTTAGTAGAATGCATGAAGCTGTACAGTTTTCCATCAGATATCCAGGTTTTTAATTATTTATTGAATAGTTACGTTAGAGCTTACAAAATTGAAGAAGCTCTTCATTGTTTTAATAAAATGGTAGAATTTGATGTAAAGCCATCAATTCAGTGTATGAATATTCTTTTGACTGCTATGGTTAGGAAAAACATGATTTGTGAAGCACGGGAGTTGCATAACAAAATGTTGCTGGAAGGAGTTGCAGGTAACTGTTTTACTCTGCATGTTATGATGCGTGCTTGTTTGAAGGAAATAAATATTGTGGAGGCAGAGCAGCATTTTTTAGAAGCAAAAGCAAGAGGAGTGAAACTTGATCCACAAGCATATAGTACTTTTATCCATGTAGTTTGTTTGAAACCGAATTCTGGATATGCTTTGTCTTTGTTAAGAGAGATGAGAGCTACAGGTTGGGTTCCTTCTGAGGGCACATTTACAAGTGTTATTACTGCTTGTGTGAAGGAAGGAAATATGGTAGAGGCTTTGCGGCTGAAAGATGACATGGTTAATTGTGGGAAGTCTATGAATTTGGCTGTTAAAACAAGTTTAATAAAGGGTTATTGCATGCAAGGAGACCTGAGTAGTGCTCTAGATCTTGTGAATGAAATTTATAACTGTGGTTTGGTTCCCAACAGAGTTACGTACTCAGTTATGATTGATGGTTTCTGTAAGAACGGGTGCATGGAAAAGGCATATGAATTTTACTCTGAGATGAAAATTAAGGGCATCAAGCCAAGTGTTTATTCTTTGAATTCTATGATACAAGGGTATTTGAAATGCCAGTCTTTGCAGAATGCATTCACGATGTTTGATGAAGCAGTTGAGAGTGGTCTTGCAAATGTTTTCACGTTTAATACTTTATTATCGTGGCTTTGTAAGGAGGGTAAGGTAAATGAAGCTTGCAATTTCTGGGATGAGGTGATTGTTAAGGGTATCAGTCCTAATGCCGTTTCTTACAATACCATGATACTCGGTCATTGTAGAAAAGGTAATGTTATTGAAGCATGTAAGGTGTACAAGGAGATGCAAGATAATGGTTTTACCCCAAATGTTGTTACCTTTTCTATTCTAATGGACGGTTATTTCAAGAAAGGTGATATTGACAATGCTTTTAGTATATTTCACAAGATGATAGATGCTAATATTCTCCCCACAGACATCACTTTAGGCATTATTATCAAAGGTTTGTGCAAAGCTGGTCGTACTTCGGAGGGAAGGGATATGTTCAATAAGTTTGTTTCTGAAGGTTCTATTCCTACATGTGTAGCTTACAATACTATTATTGATGGTTTCATCAAGGAAGGTGACATTAATTTGGCCTTGAATGTATTTAGGGAAATGTGTGAAGTTGGCATTTCTCCTAGTATTGTTACCTACACGTCCTTAATTGATGGGTTTTGTAAAAGTAATAATATAGATCTTGCTTTAAAGTTGTTGAATGATATGAAAAGGAAGGGTCTTGAAATGGACATTACGGCATATGGCACACTTATTGACAGTTTTTGCAAAAGAAGGGATATGAAAAGTGCATGTGAACTTTATAATGAACTTCTTGGAGCTGGTTTATCTCCAAATGTTGTTATCTACAATAGCATGATTACTGGGTTTAAGAATCTAAACAACATGAAAGCAGCAATTGACTTATATAAGAACATGGTGAATGAGGGGATTCCATGTGATTTGCAAACTTATACCTCATTGATTGACGGACTCCTGAAAGAAGGAAGACTTCTTTATGCATCTGATCTCTACACTGAAATGCTTTCCAAGGGTATTTCGCCTGATAATCGAGCACAAACAGTTCTCATCACTGGTCTTTGTAACAAAGGACAATTAGAAAATGCACGCAAGATTTTGGAAGAGATGAATGGAAGAAACTTGACTCCTAGTGTTCTCATTTATAACACATTAATAGCTGGACACTTTAAGGAAGGAAATTTGCAAGAGGCTTTTAGGTTGCATGATGAGATGCTGGGTAGAGGTCTTGTTCCTGATAACACTACGTATGATATTCTTGTCAACGGAAAGTTCAAAGGAGATTGTACTTTTAATAGAGATTTGAGTTTCTAA

Protein sequence

MRSFEPFRILLKYVIAGSNRWDLSAYSFEPIRAQLNTFQHEIEFVPSSFGGTFIVKATMRNHSPTSPFLLYSHLKNKPLGLKSEIAGKTILHLSSSGHINQSTDALVETSSKVASQSNLVALESINGKCGTSPDFALTESHVINTLLGNISDPKSALEYFKRIEKKSGYVKSTNAISVLLLILMNSAETQKIAQNMLNRFASGNSVSSSCLINGLVECMKLYSFPSDIQVFNYLLNSYVRAYKIEEALHCFNKMVEFDVKPSIQCMNILLTAMVRKNMICEARELHNKMLLEGVAGNCFTLHVMMRACLKEINIVEAEQHFLEAKARGVKLDPQAYSTFIHVVCLKPNSGYALSLLREMRATGWVPSEGTFTSVITACVKEGNMVEALRLKDDMVNCGKSMNLAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLVPNRVTYSVMIDGFCKNGCMEKAYEFYSEMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTMFDEAVESGLANVFTFNTLLSWLCKEGKVNEACNFWDEVIVKGISPNAVSYNTMILGHCRKGNVIEACKVYKEMQDNGFTPNVVTFSILMDGYFKKGDIDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEGSIPTCVAYNTIIDGFIKEGDINLALNVFREMCEVGISPSIVTYTSLIDGFCKSNNIDLALKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITGFKNLNNMKAAIDLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGISPDNRAQTVLITGLCNKGQLENARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLVPDNTTYDILVNGKFKGDCTFNRDLSF
Homology
BLAST of CmaCh02G006070 vs. ExPASy Swiss-Prot
Match: Q9SV46 (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g54980 PE=1 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 3.3e-196
Identity = 353/768 (45.96%), Postives = 519/768 (67.58%), Query Frame = 0

Query: 139 ESHVINTLLGNISDPKSALEYFKRIEKKSGYVKSTNAISVLLLILMNSAETQKIAQNMLN 198
           ++ VI+ LL   ++P++AL ++       G  +  +   VL+ IL++S ET   A ++L 
Sbjct: 72  DASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLI 131

Query: 199 RFASGNSVS--SSCLINGLVECMKLYSFPSDIQVFNYLLNSYVRAYKIEEALHCFNKMVE 258
           R+ S ++ +  +S L++ LV+  K + F  + + FNYLLN+Y +  + + A+   N+M+E
Sbjct: 132 RYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLE 191

Query: 259 FDVKPSIQCMNILLTAMVRKNMICEARELHNKMLLEGVAGNCFTLHVMMRACLKEINIVE 318
            DV P    +N  L+A+V++N + EA+EL+++M+  GV G+  T  ++MRA L+E    E
Sbjct: 192 LDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251

Query: 319 AEQHFLEAKARGVKLDPQAYSTFIHVVCLKPNSGYALSLLREMRATG-WVPSEGTFTSVI 378
           A +    A  RG + D   YS  +   C   +   A SLLREM+     VPS+ T+TSVI
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311

Query: 379 TACVKEGNMVEALRLKDDMVNCGKSMNLAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLV 438
            A VK+GNM +A+RLKD+M++ G SMN+   TSLI G+C   DL SAL L +++   G  
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371

Query: 439 PNRVTYSVMIDGFCKNGCMEKAYEFYSEMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTM 498
           PN VT+SV+I+ F KNG MEKA EFY +M++ G+ PSV+ ++++IQG+LK Q  + A  +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431

Query: 499 FDEAVESGLANVFTFNTLLSWLCKEGKVNEACNFWDEVIVKGISPNAVSYNTMILGHCRK 558
           FDE+ E+GLANVF  NT+LSWLCK+GK +EA     ++  +GI PN VSYN ++LGHCR+
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491

Query: 559 GNVIEACKVYKEMQDNGFTPNVVTFSILMDGYFKKGDIDNAFSIFHKMIDANILPTDITL 618
            N+  A  V+  + + G  PN  T+SIL+DG F+  D  NA  + + M  +NI    +  
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551

Query: 619 GIIIKGLCKAGRTSEGRDMFNKFVSEGSI-PTCVAYNTIIDGFIKEGDINLALNVFREMC 678
             II GLCK G+TS+ R++    + E  +  +C++YN+IIDGF KEG+++ A+  + EMC
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611

Query: 679 EVGISPSIVTYTSLIDGFCKSNNIDLALKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMK 738
             GISP+++TYTSL++G CK+N +D AL++ ++MK KG+++DI AYG LID FCKR +M+
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671

Query: 739 SACELYNELLGAGLSPNVVIYNSMITGFKNLNNMKAAIDLYKNMVNEGIPCDLQTYTSLI 798
           SA  L++ELL  GL+P+  IYNS+I+GF+NL NM AA+DLYK M+ +G+ CDL TYT+LI
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731

Query: 799 DGLLKEGRLLYASDLYTEMLSKGISPDNRAQTVLITGLCNKGQLENARKILEEMNGRNLT 858
           DGLLK+G L+ AS+LYTEM + G+ PD    TV++ GL  KGQ     K+ EEM   N+T
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791

Query: 859 PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLVPDNTTYDILVNGK 903
           P+VLIYN +IAGH++EGNL EAFRLHDEML +G++PD  T+DILV+G+
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQ 839

BLAST of CmaCh02G006070 vs. ExPASy Swiss-Prot
Match: O80958 (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LOJ PE=1 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 4.1e-194
Identity = 373/861 (43.32%), Postives = 537/861 (62.37%), Query Frame = 0

Query: 52  TFIVKATMRNHSPTSPFLLYSHLKNKPLGLKSEIAGKTILHL--SSSGHINQSTDALVET 111
           TF+V    R      P  L+  +  KP+  ++       LH   + S  I+ ST   + T
Sbjct: 3   TFMVSKRFR-----PPIFLHRFINPKPISSQTR-----FLHPPDNQSRDISDSTTETIST 62

Query: 112 -----SSKVASQSNLVALESINGKCGTSPDFALTESHVINTLLGNISDPKSALEYFKRIE 171
                 + V + S L +               + ++ VI  LLG  +DP SAL+Y   ++
Sbjct: 63  LEFPHKTSVPNHSPLTSTSETENH--------VDDARVIEVLLGRRNDPVSALQYCNWVK 122

Query: 172 KKSGYVKSTNAISVLLLILMNSAETQKIAQNMLNRFASGN-SVSSSCLINGLVECMKLYS 231
                 +  +   VL+ IL++S  T   A N+L  F S N ++  + ++N LV+  K + 
Sbjct: 123 PLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFG 182

Query: 232 FPSDIQVFNYLLNSYVRAYKIEEALHCFNKMVEFDVKPSIQCMNILLTAMVRKNMICEAR 291
           F    + FNYLLN+Y+R  +++ A+ CF  MV+  V P +  +N +L+++VR N+I EA+
Sbjct: 183 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 242

Query: 292 ELHNKMLLEGVAGNCFTLHVMMRACLKEINIVEAEQHFLEAKARGVKLDPQAYSTFIHVV 351
           E++NKM+L GVAG+  T  ++MRA L+E    EA + F    +RG + D   +S  +   
Sbjct: 243 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 302

Query: 352 CLKPNSGYALSLLREMRATGWVP-SEGTFTSVITACVKEGNMVEALRLKDDMVNCGKSMN 411
           C  P+   AL LLREMR    VP S+ T+TSVI A VKEGNM EA+R+ D+MV  G  M+
Sbjct: 303 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 362

Query: 412 LAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLVPNRVTYSVMIDGFCKNGCMEKAYEFYS 471
           +   TSL+ GYC   +L  ALDL N +   GL P++V +SVM++ FCKN  MEKA EFY 
Sbjct: 363 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 422

Query: 472 EMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTMFDEAVESGLANVFTFNTLLSWLCKEGK 531
            MK   I PS   +++MIQG LK +S + A  +F+++ ES +A+ F  N +    CK+GK
Sbjct: 423 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGK 482

Query: 532 VNEACNFWDEVIVKGISPNAVSYNTMILGHCRKGNVIEACKVYKEMQDNGFTPNVVTFSI 591
           V+ A +F   +  KGI PN V YN M+L HCR  N+  A  ++ EM + G  PN  T+SI
Sbjct: 483 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 542

Query: 592 LMDGYFKKGDIDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEG 651
           L+DG+FK  D  NA+ + ++M  +N    ++    II GLCK G+TS+ ++M    + E 
Sbjct: 543 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 602

Query: 652 SIP-TCVAYNTIIDGFIKEGDINLALNVFREMCEVGISPSIVTYTSLIDGFCKSNNIDLA 711
               +C +YN+IIDGF+K GD + A+  +REM E G SP++VT+TSLI+GFCKSN +DLA
Sbjct: 603 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 662

Query: 712 LKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITG 771
           L++ ++MK   L++D+ AYG LID FCK+ DMK+A  L++EL   GL PNV +YNS+I+G
Sbjct: 663 LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG 722

Query: 772 FKNLNNMKAAIDLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGISPD 831
           F+NL  M AAIDLYK MVN+GI CDL TYT++IDGLLK+G +  ASDLY+E+L  GI PD
Sbjct: 723 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPD 782

Query: 832 NRAQTVLITGLCNKGQLENARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHD 891
                VL+ GL  KGQ   A K+LEEM  +++TP+VL+Y+T+IAGH +EGNL EAFRLHD
Sbjct: 783 EILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHD 842

Query: 892 EMLGRGLVPDNTTYDILVNGK 903
           EML +G+V D+T +++LV+G+
Sbjct: 843 EMLEKGIVHDDTVFNLLVSGR 845

BLAST of CmaCh02G006070 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.6e-92
Identity = 229/830 (27.59%), Postives = 389/830 (46.87%), Query Frame = 0

Query: 141 HVINTLLGNISDPKSALEYFKRIEKKSGYVKSTNAISVLLLILMNSA---ETQKIAQNML 200
           HV   L+G I DPK  L +F  +    G+  ST +  +L+  L+ +        + Q +L
Sbjct: 72  HVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLL 131

Query: 201 NRFASGNSVSSSCLINGLVECMKLYSFPSDIQVFNYLLNSYVRAYKIEEALHCFNKMV-E 260
            R     ++  S + N L  C +     S    F+ L+  YVR+ ++ + +  F  M+ +
Sbjct: 132 LR-----ALKPSDVFNVLFSCYEKCKLSSS-SSFDLLIQHYVRSRRVLDGVLVFKMMITK 191

Query: 261 FDVKPSIQCMNILLTAMVRKNMICEARELHNKMLLEGVAGNCFTLHVMMRACLKEINIVE 320
             + P ++ ++ LL  +V+      A EL N M+  G+  + +    ++R+  +  ++  
Sbjct: 192 VSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSR 251

Query: 321 AEQHFLEAKARG-----------------------------------VKLDPQAYSTFIH 380
           A++     +A G                                   +K D   Y T ++
Sbjct: 252 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 311

Query: 381 VVCLKPNSGYALSLLREMRATGWVPSEGTFTSVITACVKEGNMVEALRLKDDMVNCGKSM 440
            +C        L ++ EM    + PSE   +S++    K G + EAL L   +V+ G S 
Sbjct: 312 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 371

Query: 441 NLAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLVPNRVTYSVMIDGFCKNGCMEKAYEFY 500
           NL V  +LI   C       A  L + +   GL PN VTYS++ID FC+ G ++ A  F 
Sbjct: 372 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 431

Query: 501 SEMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTMFDEAVESGL-ANVFTFNTLLSWLCKE 560
            EM   G+K SVY  NS+I G+ K   +  A     E +   L   V T+ +L+   C +
Sbjct: 432 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 491

Query: 561 GKVNEACNFWDEVIVKGISPNAVSYNTMILGHCRKGNVIEACKVYKEMQDNGFTPNVVTF 620
           GK+N+A   + E+  KGI+P+  ++ T++ G  R G + +A K++ EM +    PN VT+
Sbjct: 492 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 551

Query: 621 SILMDGYFKKGDIDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVS 680
           +++++GY ++GD+  AF    +M +  I+P   +   +I GLC  G+ SE +   +    
Sbjct: 552 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 611

Query: 681 EGSIPTCVAYNTIIDGFIKEGDINLALNVFREMCEVGISPSIVTYTSLIDGFCKSNNIDL 740
                  + Y  ++ GF +EG +  AL+V +EM + G+   +V Y  LIDG  K  +  L
Sbjct: 612 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 671

Query: 741 ALKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMIT 800
              LL +M  +GL+ D   Y ++ID+  K  D K A  +++ ++  G  PN V Y ++I 
Sbjct: 672 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 731

Query: 801 GF------------------------------------KNLNNMKAAIDLYKNMVNEGIP 860
           G                                     K   +M+ A++L+ N + +G+ 
Sbjct: 732 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH-NAILKGLL 791

Query: 861 CDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGISPDNRAQTVLITGLCNKGQLENARKI 895
            +  TY  LI G  ++GR+  AS+L T M+  G+SPD    T +I  LC +  ++ A ++
Sbjct: 792 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 851

BLAST of CmaCh02G006070 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 5.0e-91
Identity = 234/888 (26.35%), Postives = 417/888 (46.96%), Query Frame = 0

Query: 90  ILHLSSSGHINQSTDALVETSSKVASQSNLVALESINGKCGTSPDFALTESHVINTLLGN 149
           +L  S S ++ + +DA  E +  +  ++    L S N     +P+  L+   V+ +    
Sbjct: 19  LLFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLS---VLRS--KR 78

Query: 150 ISDPKSALEYFKRIEKKSGYVKSTNAISVLLLILMNSAETQK---IAQNMLNRFASGNSV 209
           + DP   L +F  ++ +    +  ++ S L L L N    +K   + + M+ R      V
Sbjct: 79  VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEV 138

Query: 210 SSSCLINGLVECMKLYSFPSDIQV-FNYLLNSYVRAYKIEEALHCFNKMVEFDVKPSIQC 269
            SS     +V C + +   SD  V F  L + Y+    IEEA+  F+  +  ++ P +  
Sbjct: 139 WSS-----IVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSR 198

Query: 270 MNILLTA----------------MVRKNMICEARELHNKMLLEGVAGNC----------- 329
             +LL A                MV +N++ + +  H  ++    AGN            
Sbjct: 199 CKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 258

Query: 330 -----------------------------FTLHVMMRACLKEINIVEAEQHFLEAKARGV 389
                                        +T  V++    K   + +A+   +E  + GV
Sbjct: 259 KEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 318

Query: 390 KLDPQAYSTFIHVVCLKPNSGYALSLLREMRATGWVPSEGTFTSVITACVKEGNMVEALR 449
            LD   YS  I  +    N+  A  L+ EM + G       +   I    KEG M +A  
Sbjct: 319 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 378

Query: 450 LKDDMVNCGKSMNLAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLVPNRVTYSVMIDGFC 509
           L D M+  G         SLI+GYC + ++    +L+ E+    +V +  TY  ++ G C
Sbjct: 379 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 438

Query: 510 KNGCMEKAYEFYSEMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTMFDEAVESGLA-NVF 569
            +G ++ AY    EM   G +P+V    ++I+ +L+     +A  +  E  E G+A ++F
Sbjct: 439 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 498

Query: 570 TFNTLLSWLCKEGKVNEACNFWDEVIVKGISPNAVSYNTMILGHCRKGNVIEACKVYKEM 629
            +N+L+  L K  +++EA +F  E++  G+ PNA +Y   I G+        A K  KEM
Sbjct: 499 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 558

Query: 630 QDNGFTPNVVTFSILMDGYFKKGDIDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRT 689
           ++ G  PN V  + L++ Y KKG +  A S +  M+D  IL    T  +++ GL K  + 
Sbjct: 559 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 618

Query: 690 SEGRDMFNKFVSEGSIPTCVAYNTIIDGFIKEGDINLALNVFREMCEVGISPSIVTYTSL 749
            +  ++F +   +G  P   +Y  +I+GF K G++  A ++F EM E G++P+++ Y  L
Sbjct: 619 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 678

Query: 750 IDGFCKSNNIDLALKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGL 809
           + GFC+S  I+ A +LL++M  KGL  +   Y T+ID +CK  D+  A  L++E+   GL
Sbjct: 679 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 738

Query: 810 SPNVVIYNSMITGFKNLNNMKAAIDLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASD 869
            P+  +Y +++ G   LN+++ AI ++     +G       + +LI+ + K G+    ++
Sbjct: 739 VPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGK----TE 798

Query: 870 LYTEMLSKGI--------SPDNRAQTVLITGLCNKGQLENARKILEEMNGRNLTPSVLIY 909
           L TE+L++ +         P++    ++I  LC +G LE A+++  +M   NL P+V+ Y
Sbjct: 799 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 858

BLAST of CmaCh02G006070 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.1e-82
Identity = 166/546 (30.40%), Postives = 286/546 (52.38%), Query Frame = 0

Query: 364 WVPSEGTFTSVITACVKEGNMVEALRLKDDMVNCGKSMNL---AVKTSLIKGYCMQGDLS 423
           W      F       V  G + EA R+ + M+N G  +++    V  + +   C +   +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK--TA 230

Query: 424 SALDLVNEIYNCGLVPNRVTYSVMIDGFCKNGCMEKAYEFYSEMKIKGIKPSVYSLNSMI 483
           +A+ +  E    G+  N  +Y+++I   C+ G +++A+     M++KG  P V S ++++
Sbjct: 231 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 290

Query: 484 QGYLKCQSLQNAFTMFDEAVESGL-ANVFTFNTLLSWLCKEGKVNEACNFWDEVIVKGIS 543
            GY +   L   + + +     GL  N + + +++  LC+  K+ EA   + E+I +GI 
Sbjct: 291 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 350

Query: 544 PNAVSYNTMILGHCRKGNVIEACKVYKEMQDNGFTPNVVTFSILMDGYFKKGDIDNAFSI 603
           P+ V Y T+I G C++G++  A K + EM     TP+V+T++ ++ G+ + GD+  A  +
Sbjct: 351 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 410

Query: 604 FHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEGSIPTCVAYNTIIDGFIK 663
           FH+M    + P  +T   +I G CKAG   +   + N  +  G  P  V Y T+IDG  K
Sbjct: 411 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 470

Query: 664 EGDINLALNVFREMCEVGISPSIVTYTSLIDGFCKSNNIDLALKLLNDMKRKGLEMDITA 723
           EGD++ A  +  EM ++G+ P+I TY S+++G CKS NI+ A+KL+ + +  GL  D   
Sbjct: 471 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 530

Query: 724 YGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITGFKNLNNMKAAIDLYKNMV 783
           Y TL+D++CK  +M  A E+  E+LG GL P +V +N ++ GF     ++    L   M+
Sbjct: 531 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 590

Query: 784 NEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGISPDNRAQTVLITGLCNKGQLE 843
            +GI  +  T+ SL+        L  A+ +Y +M S+G+ PD +    L+ G C    ++
Sbjct: 591 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 650

Query: 844 NARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLVPDNTTYDILV 903
            A  + +EM G+  + SV  Y+ LI G  K     EA  + D+M   GL  D   +D   
Sbjct: 651 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 710

Query: 904 NGKFKG 906
           + K+KG
Sbjct: 711 DTKYKG 714

BLAST of CmaCh02G006070 vs. TAIR 10
Match: AT3G54980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 686.8 bits (1771), Expect = 2.4e-197
Identity = 353/768 (45.96%), Postives = 519/768 (67.58%), Query Frame = 0

Query: 139 ESHVINTLLGNISDPKSALEYFKRIEKKSGYVKSTNAISVLLLILMNSAETQKIAQNMLN 198
           ++ VI+ LL   ++P++AL ++       G  +  +   VL+ IL++S ET   A ++L 
Sbjct: 72  DASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLI 131

Query: 199 RFASGNSVS--SSCLINGLVECMKLYSFPSDIQVFNYLLNSYVRAYKIEEALHCFNKMVE 258
           R+ S ++ +  +S L++ LV+  K + F  + + FNYLLN+Y +  + + A+   N+M+E
Sbjct: 132 RYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLE 191

Query: 259 FDVKPSIQCMNILLTAMVRKNMICEARELHNKMLLEGVAGNCFTLHVMMRACLKEINIVE 318
            DV P    +N  L+A+V++N + EA+EL+++M+  GV G+  T  ++MRA L+E    E
Sbjct: 192 LDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251

Query: 319 AEQHFLEAKARGVKLDPQAYSTFIHVVCLKPNSGYALSLLREMRATG-WVPSEGTFTSVI 378
           A +    A  RG + D   YS  +   C   +   A SLLREM+     VPS+ T+TSVI
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311

Query: 379 TACVKEGNMVEALRLKDDMVNCGKSMNLAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLV 438
            A VK+GNM +A+RLKD+M++ G SMN+   TSLI G+C   DL SAL L +++   G  
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371

Query: 439 PNRVTYSVMIDGFCKNGCMEKAYEFYSEMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTM 498
           PN VT+SV+I+ F KNG MEKA EFY +M++ G+ PSV+ ++++IQG+LK Q  + A  +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431

Query: 499 FDEAVESGLANVFTFNTLLSWLCKEGKVNEACNFWDEVIVKGISPNAVSYNTMILGHCRK 558
           FDE+ E+GLANVF  NT+LSWLCK+GK +EA     ++  +GI PN VSYN ++LGHCR+
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491

Query: 559 GNVIEACKVYKEMQDNGFTPNVVTFSILMDGYFKKGDIDNAFSIFHKMIDANILPTDITL 618
            N+  A  V+  + + G  PN  T+SIL+DG F+  D  NA  + + M  +NI    +  
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551

Query: 619 GIIIKGLCKAGRTSEGRDMFNKFVSEGSI-PTCVAYNTIIDGFIKEGDINLALNVFREMC 678
             II GLCK G+TS+ R++    + E  +  +C++YN+IIDGF KEG+++ A+  + EMC
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611

Query: 679 EVGISPSIVTYTSLIDGFCKSNNIDLALKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMK 738
             GISP+++TYTSL++G CK+N +D AL++ ++MK KG+++DI AYG LID FCKR +M+
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671

Query: 739 SACELYNELLGAGLSPNVVIYNSMITGFKNLNNMKAAIDLYKNMVNEGIPCDLQTYTSLI 798
           SA  L++ELL  GL+P+  IYNS+I+GF+NL NM AA+DLYK M+ +G+ CDL TYT+LI
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731

Query: 799 DGLLKEGRLLYASDLYTEMLSKGISPDNRAQTVLITGLCNKGQLENARKILEEMNGRNLT 858
           DGLLK+G L+ AS+LYTEM + G+ PD    TV++ GL  KGQ     K+ EEM   N+T
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791

Query: 859 PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLVPDNTTYDILVNGK 903
           P+VLIYN +IAGH++EGNL EAFRLHDEML +G++PD  T+DILV+G+
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQ 839

BLAST of CmaCh02G006070 vs. TAIR 10
Match: AT2G39230.1 (LATERAL ORGAN JUNCTION )

HSP 1 Score: 679.9 bits (1753), Expect = 2.9e-195
Identity = 373/861 (43.32%), Postives = 537/861 (62.37%), Query Frame = 0

Query: 52  TFIVKATMRNHSPTSPFLLYSHLKNKPLGLKSEIAGKTILHL--SSSGHINQSTDALVET 111
           TF+V    R      P  L+  +  KP+  ++       LH   + S  I+ ST   + T
Sbjct: 3   TFMVSKRFR-----PPIFLHRFINPKPISSQTR-----FLHPPDNQSRDISDSTTETIST 62

Query: 112 -----SSKVASQSNLVALESINGKCGTSPDFALTESHVINTLLGNISDPKSALEYFKRIE 171
                 + V + S L +               + ++ VI  LLG  +DP SAL+Y   ++
Sbjct: 63  LEFPHKTSVPNHSPLTSTSETENH--------VDDARVIEVLLGRRNDPVSALQYCNWVK 122

Query: 172 KKSGYVKSTNAISVLLLILMNSAETQKIAQNMLNRFASGN-SVSSSCLINGLVECMKLYS 231
                 +  +   VL+ IL++S  T   A N+L  F S N ++  + ++N LV+  K + 
Sbjct: 123 PLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFG 182

Query: 232 FPSDIQVFNYLLNSYVRAYKIEEALHCFNKMVEFDVKPSIQCMNILLTAMVRKNMICEAR 291
           F    + FNYLLN+Y+R  +++ A+ CF  MV+  V P +  +N +L+++VR N+I EA+
Sbjct: 183 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 242

Query: 292 ELHNKMLLEGVAGNCFTLHVMMRACLKEINIVEAEQHFLEAKARGVKLDPQAYSTFIHVV 351
           E++NKM+L GVAG+  T  ++MRA L+E    EA + F    +RG + D   +S  +   
Sbjct: 243 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 302

Query: 352 CLKPNSGYALSLLREMRATGWVP-SEGTFTSVITACVKEGNMVEALRLKDDMVNCGKSMN 411
           C  P+   AL LLREMR    VP S+ T+TSVI A VKEGNM EA+R+ D+MV  G  M+
Sbjct: 303 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 362

Query: 412 LAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLVPNRVTYSVMIDGFCKNGCMEKAYEFYS 471
           +   TSL+ GYC   +L  ALDL N +   GL P++V +SVM++ FCKN  MEKA EFY 
Sbjct: 363 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 422

Query: 472 EMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTMFDEAVESGLANVFTFNTLLSWLCKEGK 531
            MK   I PS   +++MIQG LK +S + A  +F+++ ES +A+ F  N +    CK+GK
Sbjct: 423 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGK 482

Query: 532 VNEACNFWDEVIVKGISPNAVSYNTMILGHCRKGNVIEACKVYKEMQDNGFTPNVVTFSI 591
           V+ A +F   +  KGI PN V YN M+L HCR  N+  A  ++ EM + G  PN  T+SI
Sbjct: 483 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 542

Query: 592 LMDGYFKKGDIDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEG 651
           L+DG+FK  D  NA+ + ++M  +N    ++    II GLCK G+TS+ ++M    + E 
Sbjct: 543 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 602

Query: 652 SIP-TCVAYNTIIDGFIKEGDINLALNVFREMCEVGISPSIVTYTSLIDGFCKSNNIDLA 711
               +C +YN+IIDGF+K GD + A+  +REM E G SP++VT+TSLI+GFCKSN +DLA
Sbjct: 603 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 662

Query: 712 LKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITG 771
           L++ ++MK   L++D+ AYG LID FCK+ DMK+A  L++EL   GL PNV +YNS+I+G
Sbjct: 663 LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG 722

Query: 772 FKNLNNMKAAIDLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGISPD 831
           F+NL  M AAIDLYK MVN+GI CDL TYT++IDGLLK+G +  ASDLY+E+L  GI PD
Sbjct: 723 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPD 782

Query: 832 NRAQTVLITGLCNKGQLENARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHD 891
                VL+ GL  KGQ   A K+LEEM  +++TP+VL+Y+T+IAGH +EGNL EAFRLHD
Sbjct: 783 EILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHD 842

Query: 892 EMLGRGLVPDNTTYDILVNGK 903
           EML +G+V D+T +++LV+G+
Sbjct: 843 EMLEKGIVHDDTVFNLLVSGR 845

BLAST of CmaCh02G006070 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 341.7 bits (875), Expect = 1.9e-93
Identity = 229/830 (27.59%), Postives = 389/830 (46.87%), Query Frame = 0

Query: 141 HVINTLLGNISDPKSALEYFKRIEKKSGYVKSTNAISVLLLILMNSA---ETQKIAQNML 200
           HV   L+G I DPK  L +F  +    G+  ST +  +L+  L+ +        + Q +L
Sbjct: 72  HVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLL 131

Query: 201 NRFASGNSVSSSCLINGLVECMKLYSFPSDIQVFNYLLNSYVRAYKIEEALHCFNKMV-E 260
            R     ++  S + N L  C +     S    F+ L+  YVR+ ++ + +  F  M+ +
Sbjct: 132 LR-----ALKPSDVFNVLFSCYEKCKLSSS-SSFDLLIQHYVRSRRVLDGVLVFKMMITK 191

Query: 261 FDVKPSIQCMNILLTAMVRKNMICEARELHNKMLLEGVAGNCFTLHVMMRACLKEINIVE 320
             + P ++ ++ LL  +V+      A EL N M+  G+  + +    ++R+  +  ++  
Sbjct: 192 VSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSR 251

Query: 321 AEQHFLEAKARG-----------------------------------VKLDPQAYSTFIH 380
           A++     +A G                                   +K D   Y T ++
Sbjct: 252 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 311

Query: 381 VVCLKPNSGYALSLLREMRATGWVPSEGTFTSVITACVKEGNMVEALRLKDDMVNCGKSM 440
            +C        L ++ EM    + PSE   +S++    K G + EAL L   +V+ G S 
Sbjct: 312 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 371

Query: 441 NLAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLVPNRVTYSVMIDGFCKNGCMEKAYEFY 500
           NL V  +LI   C       A  L + +   GL PN VTYS++ID FC+ G ++ A  F 
Sbjct: 372 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 431

Query: 501 SEMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTMFDEAVESGL-ANVFTFNTLLSWLCKE 560
            EM   G+K SVY  NS+I G+ K   +  A     E +   L   V T+ +L+   C +
Sbjct: 432 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 491

Query: 561 GKVNEACNFWDEVIVKGISPNAVSYNTMILGHCRKGNVIEACKVYKEMQDNGFTPNVVTF 620
           GK+N+A   + E+  KGI+P+  ++ T++ G  R G + +A K++ EM +    PN VT+
Sbjct: 492 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 551

Query: 621 SILMDGYFKKGDIDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVS 680
           +++++GY ++GD+  AF    +M +  I+P   +   +I GLC  G+ SE +   +    
Sbjct: 552 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 611

Query: 681 EGSIPTCVAYNTIIDGFIKEGDINLALNVFREMCEVGISPSIVTYTSLIDGFCKSNNIDL 740
                  + Y  ++ GF +EG +  AL+V +EM + G+   +V Y  LIDG  K  +  L
Sbjct: 612 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 671

Query: 741 ALKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMIT 800
              LL +M  +GL+ D   Y ++ID+  K  D K A  +++ ++  G  PN V Y ++I 
Sbjct: 672 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 731

Query: 801 GF------------------------------------KNLNNMKAAIDLYKNMVNEGIP 860
           G                                     K   +M+ A++L+ N + +G+ 
Sbjct: 732 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH-NAILKGLL 791

Query: 861 CDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGISPDNRAQTVLITGLCNKGQLENARKI 895
            +  TY  LI G  ++GR+  AS+L T M+  G+SPD    T +I  LC +  ++ A ++
Sbjct: 792 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 851

BLAST of CmaCh02G006070 vs. TAIR 10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 337.4 bits (864), Expect = 3.5e-92
Identity = 234/888 (26.35%), Postives = 417/888 (46.96%), Query Frame = 0

Query: 90  ILHLSSSGHINQSTDALVETSSKVASQSNLVALESINGKCGTSPDFALTESHVINTLLGN 149
           +L  S S ++ + +DA  E +  +  ++    L S N     +P+  L+   V+ +    
Sbjct: 19  LLFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLS---VLRS--KR 78

Query: 150 ISDPKSALEYFKRIEKKSGYVKSTNAISVLLLILMNSAETQK---IAQNMLNRFASGNSV 209
           + DP   L +F  ++ +    +  ++ S L L L N    +K   + + M+ R      V
Sbjct: 79  VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEV 138

Query: 210 SSSCLINGLVECMKLYSFPSDIQV-FNYLLNSYVRAYKIEEALHCFNKMVEFDVKPSIQC 269
            SS     +V C + +   SD  V F  L + Y+    IEEA+  F+  +  ++ P +  
Sbjct: 139 WSS-----IVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSR 198

Query: 270 MNILLTA----------------MVRKNMICEARELHNKMLLEGVAGNC----------- 329
             +LL A                MV +N++ + +  H  ++    AGN            
Sbjct: 199 CKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 258

Query: 330 -----------------------------FTLHVMMRACLKEINIVEAEQHFLEAKARGV 389
                                        +T  V++    K   + +A+   +E  + GV
Sbjct: 259 KEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 318

Query: 390 KLDPQAYSTFIHVVCLKPNSGYALSLLREMRATGWVPSEGTFTSVITACVKEGNMVEALR 449
            LD   YS  I  +    N+  A  L+ EM + G       +   I    KEG M +A  
Sbjct: 319 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 378

Query: 450 LKDDMVNCGKSMNLAVKTSLIKGYCMQGDLSSALDLVNEIYNCGLVPNRVTYSVMIDGFC 509
           L D M+  G         SLI+GYC + ++    +L+ E+    +V +  TY  ++ G C
Sbjct: 379 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 438

Query: 510 KNGCMEKAYEFYSEMKIKGIKPSVYSLNSMIQGYLKCQSLQNAFTMFDEAVESGLA-NVF 569
            +G ++ AY    EM   G +P+V    ++I+ +L+     +A  +  E  E G+A ++F
Sbjct: 439 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 498

Query: 570 TFNTLLSWLCKEGKVNEACNFWDEVIVKGISPNAVSYNTMILGHCRKGNVIEACKVYKEM 629
            +N+L+  L K  +++EA +F  E++  G+ PNA +Y   I G+        A K  KEM
Sbjct: 499 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 558

Query: 630 QDNGFTPNVVTFSILMDGYFKKGDIDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRT 689
           ++ G  PN V  + L++ Y KKG +  A S +  M+D  IL    T  +++ GL K  + 
Sbjct: 559 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 618

Query: 690 SEGRDMFNKFVSEGSIPTCVAYNTIIDGFIKEGDINLALNVFREMCEVGISPSIVTYTSL 749
            +  ++F +   +G  P   +Y  +I+GF K G++  A ++F EM E G++P+++ Y  L
Sbjct: 619 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 678

Query: 750 IDGFCKSNNIDLALKLLNDMKRKGLEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGL 809
           + GFC+S  I+ A +LL++M  KGL  +   Y T+ID +CK  D+  A  L++E+   GL
Sbjct: 679 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 738

Query: 810 SPNVVIYNSMITGFKNLNNMKAAIDLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASD 869
            P+  +Y +++ G   LN+++ AI ++     +G       + +LI+ + K G+    ++
Sbjct: 739 VPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGK----TE 798

Query: 870 LYTEMLSKGI--------SPDNRAQTVLITGLCNKGQLENARKILEEMNGRNLTPSVLIY 909
           L TE+L++ +         P++    ++I  LC +G LE A+++  +M   NL P+V+ Y
Sbjct: 799 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 858

BLAST of CmaCh02G006070 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 309.7 bits (792), Expect = 7.9e-84
Identity = 166/546 (30.40%), Postives = 286/546 (52.38%), Query Frame = 0

Query: 364 WVPSEGTFTSVITACVKEGNMVEALRLKDDMVNCGKSMNL---AVKTSLIKGYCMQGDLS 423
           W      F       V  G + EA R+ + M+N G  +++    V  + +   C +   +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK--TA 230

Query: 424 SALDLVNEIYNCGLVPNRVTYSVMIDGFCKNGCMEKAYEFYSEMKIKGIKPSVYSLNSMI 483
           +A+ +  E    G+  N  +Y+++I   C+ G +++A+     M++KG  P V S ++++
Sbjct: 231 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 290

Query: 484 QGYLKCQSLQNAFTMFDEAVESGL-ANVFTFNTLLSWLCKEGKVNEACNFWDEVIVKGIS 543
            GY +   L   + + +     GL  N + + +++  LC+  K+ EA   + E+I +GI 
Sbjct: 291 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 350

Query: 544 PNAVSYNTMILGHCRKGNVIEACKVYKEMQDNGFTPNVVTFSILMDGYFKKGDIDNAFSI 603
           P+ V Y T+I G C++G++  A K + EM     TP+V+T++ ++ G+ + GD+  A  +
Sbjct: 351 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 410

Query: 604 FHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEGSIPTCVAYNTIIDGFIK 663
           FH+M    + P  +T   +I G CKAG   +   + N  +  G  P  V Y T+IDG  K
Sbjct: 411 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 470

Query: 664 EGDINLALNVFREMCEVGISPSIVTYTSLIDGFCKSNNIDLALKLLNDMKRKGLEMDITA 723
           EGD++ A  +  EM ++G+ P+I TY S+++G CKS NI+ A+KL+ + +  GL  D   
Sbjct: 471 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 530

Query: 724 YGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITGFKNLNNMKAAIDLYKNMV 783
           Y TL+D++CK  +M  A E+  E+LG GL P +V +N ++ GF     ++    L   M+
Sbjct: 531 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 590

Query: 784 NEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGISPDNRAQTVLITGLCNKGQLE 843
            +GI  +  T+ SL+        L  A+ +Y +M S+G+ PD +    L+ G C    ++
Sbjct: 591 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 650

Query: 844 NARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLVPDNTTYDILV 903
            A  + +EM G+  + SV  Y+ LI G  K     EA  + D+M   GL  D   +D   
Sbjct: 651 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 710

Query: 904 NGKFKG 906
           + K+KG
Sbjct: 711 DTKYKG 714

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SV463.3e-19645.96Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidop... [more]
O809584.1e-19443.32Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidop... [more]
Q9FJE62.6e-9227.59Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
Q9FIT75.0e-9126.35Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop... [more]
Q0WVK71.1e-8230.40Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
AT3G54980.12.4e-19745.96Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G39230.12.9e-19543.32LATERAL ORGAN JUNCTION [more]
AT5G59900.11.9e-9327.59Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G61990.13.5e-9226.35Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G05670.17.9e-8430.40Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 719..752
e-value: 5.1E-7
score: 27.5
coord: 859..891
e-value: 8.1E-9
score: 33.1
coord: 578..611
e-value: 5.5E-8
score: 30.5
coord: 439..473
e-value: 6.2E-11
score: 39.8
coord: 407..437
e-value: 2.3E-5
score: 22.3
coord: 826..856
e-value: 0.0014
score: 16.6
coord: 683..716
e-value: 7.4E-10
score: 36.4
coord: 614..647
e-value: 8.3E-6
score: 23.7
coord: 370..402
e-value: 2.5E-5
score: 22.2
coord: 753..786
e-value: 1.1E-5
score: 23.3
coord: 789..821
e-value: 1.3E-7
score: 29.4
coord: 648..681
e-value: 4.0E-9
score: 34.1
coord: 543..577
e-value: 1.5E-10
score: 38.6
coord: 508..542
e-value: 2.8E-8
score: 31.4
coord: 230..262
e-value: 1.1E-6
score: 26.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 506..532
e-value: 3.2E-8
score: 33.1
coord: 816..848
e-value: 2.5E-5
score: 23.9
coord: 711..742
e-value: 7.7E-6
score: 25.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 370..398
e-value: 1.4E-4
score: 21.8
coord: 614..642
e-value: 0.0046
score: 17.1
coord: 475..504
e-value: 0.0088
score: 16.2
coord: 230..258
e-value: 8.6E-4
score: 19.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 540..587
e-value: 5.5E-18
score: 64.9
coord: 407..450
e-value: 4.3E-12
score: 46.0
coord: 855..901
e-value: 3.2E-14
score: 52.9
coord: 750..799
e-value: 3.9E-14
score: 52.6
coord: 645..694
e-value: 1.2E-16
score: 60.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 786..820
score: 12.046526
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 821..855
score: 10.358486
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 506..540
score: 12.112294
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 611..645
score: 9.722731
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 437..471
score: 13.975715
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 402..436
score: 9.613118
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 576..610
score: 12.145178
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 751..785
score: 10.183105
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 646..680
score: 12.013642
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 541..575
score: 13.471496
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 716..750
score: 11.301158
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 681..715
score: 12.704205
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 332..366
score: 8.648523
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 227..261
score: 10.698286
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 856..890
score: 12.309597
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 367..401
score: 9.108898
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 572..660
e-value: 6.5E-24
score: 86.3
coord: 661..764
e-value: 1.1E-32
score: 114.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 503..571
e-value: 4.2E-19
score: 70.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 219..387
e-value: 8.5E-32
score: 112.7
coord: 765..908
e-value: 1.6E-37
score: 131.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 388..502
e-value: 1.4E-30
score: 108.8
NoneNo IPR availablePANTHERPTHR47941:SF11PPR CONTAINING PLANT-LIKE PROTEINcoord: 99..908
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 99..908
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 413..617
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 587..815

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G006070.1CmaCh02G006070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding