CmaCh02G004650 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G004650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein SICKLE isoform X1
Location	Cma_Chr02: 2439367 .. 2443050 (-)
RNA-Seq Expression	CmaCh02G004650
Synteny	CmaCh02G004650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTTCACCGTTTTCTGCAGTTCGGTGTCGCCGTCGTGGTTTCTTCCGCCCCTGCCGCTACCGCAGCCTCCTCGCAGCGGTTTTATAGACTTCATTATTGTAGCAGGTATTGTTCCAATTTCCTTCTATGTGGAATAGCATTTGACACTACGAAAAAACTACATCTCTCATGAAAATCCTTACCAATATTCATCCCATCTCCGCTGAGTTTGAATTCATTCTCCTAGCCTAATTCCTGCTCGACCTCGTTGTTGCTTAAAGATTTTATTGAACTATGATCTTTCTCGTAGAGTCTTGATTGGCTGTTGGGCTCTTCGTTGGGGTTTACAATTCTTACAATTCTTCGTCTTCGTTAGAGGCTTTAATTGACATGTTTTTTCATATGAAAGATCAAATATGCTACATAAAATATAGATATAGGTATAGTTTGTAGAAGTTATCTATTTCTAGAAATTTCTCTCCTTACACCCGAAACTTTGCTGAAGAATATTATAGGACTACGGATTTCGTCGTTAATCACAGAGAAGGAAGTAGCTAGGGATTTCTTACAACAGCAATTGTTCTTTGGAATCGTAATTTCAGTTCTCTTCGGTCGTTGTTGTAAGTTCCCTATCCGATGCATTCAGTAATTTTACTTCTTTTGTAATTAATTTCAATCGAGGTGCATTTTTGTAACCTCCAAGTAGGGATTATAGATCTATGAGAATTTTGTTTCCTGTTCATGAAGGGGTCTTTAATTTTCATTGTGATCGAGTCTGTTGTGTGTTTTCAGTGATGACAGTGATTGAGAATTGATGATATTAGGTTCAATGGAAGAATCCGAGAAACGGAGGGAGCGACTGAGAGCAATGCGAATGGAAGCTTCTCAGGCTGATGTCGCTAATTATGTTGAAACTTCTCTGCCTAATCATCTTTCCAATCCATTGGTTGAGTCCTCAGCTAACATGCTAGGGCAATCAGAACCATGTACCGCCCCAAGATTTGATTATTACACAAACCCTATGGCTGCATTTTCTTCTAGCAAGAAGAGAGGGAATCAGACTGTGTCTCATGCTTATGTTCCTTCCCACCTCAATAGTTCTCCAGATGCTTATGTTCCATCAAATTTTCCAGGTAATTTTATGATTTCTTAAATAATTTGTGGATGGAAAAAAAAATAAAGGATCATGTAATGGGAATAGGATATCAAGCTACTTGTTTGATGGTGGATGCTTCATTATAGAAGGGTCCAATTGCGAATACATGGGTAAAAAATGGCCTAATGTGCCGGGTTATTATGTTCCCCTCCATAAAAAAATGTTACAAAGAAGCTTTCAAATCAATACAGACATGTAATCTATAAACAAAATCTAGTAGAAGGTGCTCCCAACTTGAGGTTGTAAAATGAACTTGGTCACAAAGTACTGTCGATTCTTTCTAGTTTTAACCTTTTGAGAGCTTTTGAATATAGAGATGGCTGTAGGGAGATGTTATTAGGAATATGAAATGCTTCTGGTTATGAACAAAGAGCCTGCATCAGGGAGCAGTGCAGAAACAAACCAGAGTCTCAAGAATAGCTTGTGTATCCTCTCTACTACTGTGATTAAAACCAAATTCTTTCAAAATCCATGAAACAAACGGGACATTTATAACTTTACTTGCCTGGCTCCTTGCACAAAAAGGAAAAAAAATCCACAAGCTATTTGTTTCAATGGAACTTTCCATAACCTTTTTAAGAGGAAAAGAGAGATTTTCTGCGTGTTGGAGAAAATTCCAACTAGGAAAAGGTGGCTTGCCATCATTCATGTCAGGCTTTCCCATATAAAACTTTTTGTCGCTTTATTAATCCGAGCCACTATGGGAGGGATTCTAAGAGAAACATAATGAGAATCGATTATAAAAGCTAGTCATATACTTTTGAGAAAATTAATGATAAAAGTTAGTCTTTCTTCCTTTTATGGTTCTTATTTGGTTTGATGAGCATGACTGTTAAATGTCTAGAGTATTAAGGATATACAATTAGATGTGTTTCTATTAGTGGTTCGGTATTAAATGTGTGTTTGTTTTGCAAGCTTTTGATGGGGGAGGTAAATGTATATATTTAACATAAATGCTACGTAGCACTCTTTTGTACAAGATATACTTCTGTAGTTTGATTTTAGTTTCCAATTCAAACTTTCTAATTCCTCCCCATGGTTGGATGCGATGCAATCATGAAAGCAGTATTTTTTAAATGATAAAAGACATGAGTTTTGTAATATTTCACATCTATCTTATTAGTATTTGCTAATATTTTACATTAAAGTTTATGTGATGTTACTGGTAGAATTGGGAAGTATCTCATATGGCGATCAGCTATAAATTTTTTTAATGCTTGTTGTGGTTTATATTTTATTTCTCATCATGAGTACGTTCTTTCAGCATTTTGTAGTTAGGGAATCACTTTTCTCCTCCAAATCTAGATATAATATTGTGTTGTAGGAATGAGAAACCCTGAAATGTCTCCCTCTGCGCCTCATCAATTCCATCAACATTCACCTGACCAGAGATTCTATGCACGAGGTTATAGTGGATCTGGTGGCCATGGTAGCCCAGCAATGCCCAGGCCTTTTCCTATGGATCAAAGAAGTCCTAATATGTGGGGTGGACCTAGAAGCCCATATGTCAACCACTTTCCCGGTCCTCCCCCAAGGGTGATGAACTCCCCCAGAGGCCCTTTTGTCAACCAATTCCCTAGCCAGCTACCAAGGGATATGAGCTCACCCAGCTTTGTCTCTGGACCAAGAGGTAATTCTTACCCCAGTCAAACGCAAGACATGGTTAATCACCTCAGTCCAAGTCCTAGTCCTGGGTATCAAGGCAGTTCTAGTCCTGGGTATCAAGGCAGTTCTAGTCCTGGTGGAGGCAGCCATGGTCATCGTGGCAATATGACCCCTAGTCCAAGATTTGGCTTGGGACGAGGTTTTGGTTCTCATGGTCGTCGTTTTTCATCAGACAAATCATCTAGACCAGAACAGTTTTACGATCCATCCATGCTTGAAGATCCCTGGAAGGTTCTGCAACCTGGTATTTGGAGGCCAGTTGCTCCATTGAGAAGTTCTGCCAACCCTTCAGAATCTTGGATTTCGAAATTCAATACGAAAAAAGCAAGAGTTTTAGATGCTTCTTCTGGCAGGTCAGGCTCTCAACCCAGCCTCGCCGAGTATCTGGCTGCTTCCTTCAACGAAGCAGCCAACAACACACTAGGTGAGTAAAACTGTAATTCTGAAACTAGGGATTCTCAAAATCCCAGCCCAATTTTTCTCCATACGCTGGTTTAATATGGTAATATTTAAGGTAAATCTGTAGTGACAGTTATATCTCTCCATGTTAGTTTGTGAGTTCTATGAGCTATTTTCTGTTAGCTATATGTTTTGTCGACTGTGTTTGACTGATGGACATGATTTAGCTATGCTCGTCTTTATCAAGAATTTAGTAGGATTGTGTTCCAAATAATATTGCTCTGTTTCATCATCTTCTTAATGTGGAACGCATCCTGCTGAATTTGATATTTTGAGTAAATGGTTGAAGTTGGGAACTAACCACAAGAGGAGGAAAATATGCAGGGTTGGCCTCTGCTTTTCCACAAGTTATTTTTAAAAATTCTAATGTTCTATTACGTTACGGAGTCTGAAATGCCTTGAGTAAGAACAGATGTATAGAAC

mRNA sequence

ACTCTTCACCGTTTTCTGCAGTTCGGTGTCGCCGTCGTGGTTTCTTCCGCCCCTGCCGCTACCGCAGCCTCCTCGCAGCGGTTTTATAGACTTCATTATTGTAGCAGAATATTATAGGACTACGGATTTCGTCGTTAATCACAGAGAAGGAAGTAGCTAGGGATTTCTTACAACAGCAATTGTTCTTTGGAATCGTAATTTCAGTTCTCTTCGGTCGTTGTTTGATGACAGTGATTGAGAATTGATGATATTAGGTTCAATGGAAGAATCCGAGAAACGGAGGGAGCGACTGAGAGCAATGCGAATGGAAGCTTCTCAGGCTGATGTCGCTAATTATGTTGAAACTTCTCTGCCTAATCATCTTTCCAATCCATTGGTTGAGTCCTCAGCTAACATGCTAGGGCAATCAGAACCATGTACCGCCCCAAGATTTGATTATTACACAAACCCTATGGCTGCATTTTCTTCTAGCAAGAAGAGAGGGAATCAGACTGTGTCTCATGCTTATGTTCCTTCCCACCTCAATAGTTCTCCAGATGCTTATGTTCCATCAAATTTTCCAGGAATGAGAAACCCTGAAATGTCTCCCTCTGCGCCTCATCAATTCCATCAACATTCACCTGACCAGAGATTCTATGCACGAGGTTATAGTGGATCTGGTGGCCATGGTAGCCCAGCAATGCCCAGGCCTTTTCCTATGGATCAAAGAAGTCCTAATATGTGGGGTGGACCTAGAAGCCCATATGTCAACCACTTTCCCGGTCCTCCCCCAAGGGTGATGAACTCCCCCAGAGGCCCTTTTGTCAACCAATTCCCTAGCCAGCTACCAAGGGATATGAGCTCACCCAGCTTTGTCTCTGGACCAAGAGGTAATTCTTACCCCAGTCAAACGCAAGACATGGTTAATCACCTCAGTCCAAGTCCTAGTCCTGGGTATCAAGGCAGTTCTAGTCCTGGGTATCAAGGCAGTTCTAGTCCTGGTGGAGGCAGCCATGGTCATCGTGGCAATATGACCCCTAGTCCAAGATTTGGCTTGGGACGAGGTTTTGGTTCTCATGGTCGTCGTTTTTCATCAGACAAATCATCTAGACCAGAACAGTTTTACGATCCATCCATGCTTGAAGATCCCTGGAAGGTTCTGCAACCTGGTATTTGGAGGCCAGTTGCTCCATTGAGAAGTTCTGCCAACCCTTCAGAATCTTGGATTTCGAAATTCAATACGAAAAAAGCAAGAGTTTTAGATGCTTCTTCTGGCAGGTCAGGCTCTCAACCCAGCCTCGCCGAGTATCTGGCTGCTTCCTTCAACGAAGCAGCCAACAACACACTAGGTGAGTAAAACTGTAATTCTGAAACTAGGGATTCTCAAAATCCCAGCCCAATTTTTCTCCATACGCTGGTTTAATATGGTAATATTTAAGGTAAATCTGTAGTGACAGTTATATCTCTCCATGTTAGTTTGTGAGTTCTATGAGCTATTTTCTGTTAGCTATATGTTTTGTCGACTGTGTTTGACTGATGGACATGATTTAGCTATGCTCGTCTTTATCAAGAATTTAGTAGGATTGTGTTCCAAATAATATTGCTCTGTTTCATCATCTTCTTAATGTGGAACGCATCCTGCTGAATTTGATATTTTGAGTAAATGGTTGAAGTTGGGAACTAACCACAAGAGGAGGAAAATATGCAGGGTTGGCCTCTGCTTTTCCACAAGTTATTTTTAAAAATTCTAATGTTCTATTACGTTACGGAGTCTGAAATGCCTTGAGTAAGAACAGATGTATAGAAC

Coding sequence (CDS)

ATGATATTAGGTTCAATGGAAGAATCCGAGAAACGGAGGGAGCGACTGAGAGCAATGCGAATGGAAGCTTCTCAGGCTGATGTCGCTAATTATGTTGAAACTTCTCTGCCTAATCATCTTTCCAATCCATTGGTTGAGTCCTCAGCTAACATGCTAGGGCAATCAGAACCATGTACCGCCCCAAGATTTGATTATTACACAAACCCTATGGCTGCATTTTCTTCTAGCAAGAAGAGAGGGAATCAGACTGTGTCTCATGCTTATGTTCCTTCCCACCTCAATAGTTCTCCAGATGCTTATGTTCCATCAAATTTTCCAGGAATGAGAAACCCTGAAATGTCTCCCTCTGCGCCTCATCAATTCCATCAACATTCACCTGACCAGAGATTCTATGCACGAGGTTATAGTGGATCTGGTGGCCATGGTAGCCCAGCAATGCCCAGGCCTTTTCCTATGGATCAAAGAAGTCCTAATATGTGGGGTGGACCTAGAAGCCCATATGTCAACCACTTTCCCGGTCCTCCCCCAAGGGTGATGAACTCCCCCAGAGGCCCTTTTGTCAACCAATTCCCTAGCCAGCTACCAAGGGATATGAGCTCACCCAGCTTTGTCTCTGGACCAAGAGGTAATTCTTACCCCAGTCAAACGCAAGACATGGTTAATCACCTCAGTCCAAGTCCTAGTCCTGGGTATCAAGGCAGTTCTAGTCCTGGGTATCAAGGCAGTTCTAGTCCTGGTGGAGGCAGCCATGGTCATCGTGGCAATATGACCCCTAGTCCAAGATTTGGCTTGGGACGAGGTTTTGGTTCTCATGGTCGTCGTTTTTCATCAGACAAATCATCTAGACCAGAACAGTTTTACGATCCATCCATGCTTGAAGATCCCTGGAAGGTTCTGCAACCTGGTATTTGGAGGCCAGTTGCTCCATTGAGAAGTTCTGCCAACCCTTCAGAATCTTGGATTTCGAAATTCAATACGAAAAAAGCAAGAGTTTTAGATGCTTCTTCTGGCAGGTCAGGCTCTCAACCCAGCCTCGCCGAGTATCTGGCTGCTTCCTTCAACGAAGCAGCCAACAACACACTAGGTGAGTAA

Protein sequence

MILGSMEESEKRRERLRAMRMEASQADVANYVETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHAYVPSHLNSSPDAYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRVMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPSQTQDMVNHLSPSPSPGYQGSSSPGYQGSSSPGGGSHGHRGNMTPSPRFGLGRGFGSHGRRFSSDKSSRPEQFYDPSMLEDPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVLDASSGRSGSQPSLAEYLAASFNEAANNTLGE

Homology

[Close]

BLAST of CmaCh02G004650 vs. ExPASy Swiss-Prot
Match: Q9SB47 (Protein SICKLE OS=Arabidopsis thaliana OX=3702 GN=SIC PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.5e-25
Identity = 132/361 (36.57%), Postives = 179/361 (49.58%), Query Frame = 0


Query: 6   MEESEKRRERLRAMRMEA---SQADVANYVETSL-PNHLSNPLVESSANMLGQSEPCTAP 65
           ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     
Sbjct: 1   MEDSEKRKQMLKAMRMEAAAQNDDDATTGTETSMSTGHLSNPLAETSNH---QQDSFETQ 60

Query: 66  RFDYYTNPMAAFSSSKKRGNQTVSHAYV--PSHLNSSPDAYVPSNFPGMRNPEMSP-SAP 125
           RFDYYT+PMAA+SS KK  N+T    Y+  PSH  SSP   VP  FP    P + P S  
Sbjct: 61  RFDYYTDPMAAYSSFKK--NKTPKQQYISSPSHQGSSP---VPPQFP----PSVPPGSLC 120

Query: 126 HQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPP 185
            ++   +    F+A  Y   G  H SP+   P       P  W    R P VNH  GPP 
Sbjct: 121 SEYQAQTNHGGFHAAHYEPRGMAHLSPSHRGP-------PAGWNNNFRPPPVNH-SGPPQ 180

Query: 186 RVMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPSQTQDMVNHLSPSPSPGYQGSSS 245
            V   PR PF   F  ++P +M +  F  G RG SY +      N+          G  +
Sbjct: 181 WV---PR-PF--PFSQEMP-NMGNNRF--GGRG-SYNNTPPQFSNY----------GRQN 240

Query: 246 PGYQGSSSPGGGSHGHRGNMTPSPRFGLGRGFGSHGRRFSSDKSSRPEQFYDPSMLEDPW 305
             + G++ P  G    RG        G+   FG  G R   +  +  E+FY  SM EDPW
Sbjct: 241 ANWGGNTYPNSGRGRSRGR-------GMNTSFGRDGGRRPMEPGA--ERFYSNSMAEDPW 300

Query: 306 KVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVLDASSGRSGSQPSLAEYLAASFNE 357
           K L+P +W+  +   SS++  ++W+ K    KK+   +A+   S +Q SLAEYLAAS + 
Sbjct: 301 KHLKPVLWKNCSDASSSSSTGQAWLPKSIAPKKSVTSEATHKTSSNQQSLAEYLAASLDG 312

[Close]

BLAST of CmaCh02G004650 vs. TAIR 10
Match: AT4G24500.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-26
Identity = 132/361 (36.57%), Postives = 179/361 (49.58%), Query Frame = 0


Query: 6   MEESEKRRERLRAMRMEA---SQADVANYVETSL-PNHLSNPLVESSANMLGQSEPCTAP 65
           ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     
Sbjct: 1   MEDSEKRKQMLKAMRMEAAAQNDDDATTGTETSMSTGHLSNPLAETSNH---QQDSFETQ 60

Query: 66  RFDYYTNPMAAFSSSKKRGNQTVSHAYV--PSHLNSSPDAYVPSNFPGMRNPEMSP-SAP 125
           RFDYYT+PMAA+SS KK  N+T    Y+  PSH  SSP   VP  FP    P + P S  
Sbjct: 61  RFDYYTDPMAAYSSFKK--NKTPKQQYISSPSHQGSSP---VPPQFP----PSVPPGSLC 120

Query: 126 HQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPP 185
            ++   +    F+A  Y   G  H SP+   P       P  W    R P VNH  GPP 
Sbjct: 121 SEYQAQTNHGGFHAAHYEPRGMAHLSPSHRGP-------PAGWNNNFRPPPVNH-SGPPQ 180

Query: 186 RVMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPSQTQDMVNHLSPSPSPGYQGSSS 245
            V   PR PF   F  ++P +M +  F  G RG SY +      N+          G  +
Sbjct: 181 WV---PR-PF--PFSQEMP-NMGNNRF--GGRG-SYNNTPPQFSNY----------GRQN 240

Query: 246 PGYQGSSSPGGGSHGHRGNMTPSPRFGLGRGFGSHGRRFSSDKSSRPEQFYDPSMLEDPW 305
             + G++ P  G    RG        G+   FG  G R   +  +  E+FY  SM EDPW
Sbjct: 241 ANWGGNTYPNSGRGRSRGR-------GMNTSFGRDGGRRPMEPGA--ERFYSNSMAEDPW 300

Query: 306 KVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVLDASSGRSGSQPSLAEYLAASFNE 357
           K L+P +W+  +   SS++  ++W+ K    KK+   +A+   S +Q SLAEYLAAS + 
Sbjct: 301 KHLKPVLWKNCSDASSSSSTGQAWLPKSIAPKKSVTSEATHKTSSNQQSLAEYLAASLDG 312

[Close]

BLAST of CmaCh02G004650 vs. TAIR 10
Match: AT4G24500.3 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-26
Identity = 132/361 (36.57%), Postives = 179/361 (49.58%), Query Frame = 0


Query: 6   MEESEKRRERLRAMRMEA---SQADVANYVETSL-PNHLSNPLVESSANMLGQSEPCTAP 65
           ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     
Sbjct: 1   MEDSEKRKQMLKAMRMEAAAQNDDDATTGTETSMSTGHLSNPLAETSNH---QQDSFETQ 60

Query: 66  RFDYYTNPMAAFSSSKKRGNQTVSHAYV--PSHLNSSPDAYVPSNFPGMRNPEMSP-SAP 125
           RFDYYT+PMAA+SS KK  N+T    Y+  PSH  SSP   VP  FP    P + P S  
Sbjct: 61  RFDYYTDPMAAYSSFKK--NKTPKQQYISSPSHQGSSP---VPPQFP----PSVPPGSLC 120

Query: 126 HQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPP 185
            ++   +    F+A  Y   G  H SP+   P       P  W    R P VNH  GPP 
Sbjct: 121 SEYQAQTNHGGFHAAHYEPRGMAHLSPSHRGP-------PAGWNNNFRPPPVNH-SGPPQ 180

Query: 186 RVMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPSQTQDMVNHLSPSPSPGYQGSSS 245
            V   PR PF   F  ++P +M +  F  G RG SY +      N+          G  +
Sbjct: 181 WV---PR-PF--PFSQEMP-NMGNNRF--GGRG-SYNNTPPQFSNY----------GRQN 240

Query: 246 PGYQGSSSPGGGSHGHRGNMTPSPRFGLGRGFGSHGRRFSSDKSSRPEQFYDPSMLEDPW 305
             + G++ P  G    RG        G+   FG  G R   +  +  E+FY  SM EDPW
Sbjct: 241 ANWGGNTYPNSGRGRSRGR-------GMNTSFGRDGGRRPMEPGA--ERFYSNSMAEDPW 300

Query: 306 KVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVLDASSGRSGSQPSLAEYLAASFNE 357
           K L+P +W+  +   SS++  ++W+ K    KK+   +A+   S +Q SLAEYLAAS + 
Sbjct: 301 KHLKPVLWKNCSDASSSSSTGQAWLPKSIAPKKSVTSEATHKTSSNQQSLAEYLAASLDG 312

[Close]

BLAST of CmaCh02G004650 vs. TAIR 10
Match: AT4G24500.2 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.6e-14
Identity = 114/359 (31.75%), Postives = 156/359 (43.45%), Query Frame = 0


Query: 6   MEESEKRRERLRAMRMEA---SQADVANYVETSL-PNHLSNPLVESSANMLGQSEPCTAP 65
           ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +     E     
Sbjct: 1   MEDSEKRKQMLKAMRMEAAAQNDDDATTGTETSMSTGHLSNPLAETSNHQQDSFE----- 60

Query: 66  RFDYYTNPMAAFSSSKKRGNQTVSHAYVPSHLNSSPDAYVPSNFPGMRNPEMSP-SAPHQ 125
                                        SH  SSP   VP  FP    P + P S   +
Sbjct: 61  ---------------------------TQSHQGSSP---VPPQFP----PSVPPGSLCSE 120

Query: 126 FHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRV 185
           +   +    F+A  Y   G  H SP+   P       P  W    R P VNH  GPP  V
Sbjct: 121 YQAQTNHGGFHAAHYEPRGMAHLSPSHRGP-------PAGWNNNFRPPPVNH-SGPPQWV 180

Query: 186 MNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPSQTQDMVNHLSPSPSPGYQGSSSPG 245
              PR PF   F  ++P +M +  F  G RG SY +      N+          G  +  
Sbjct: 181 ---PR-PF--PFSQEMP-NMGNNRF--GGRG-SYNNTPPQFSNY----------GRQNAN 240

Query: 246 YQGSSSPGGGSHGHRGNMTPSPRFGLGRGFGSHGRRFSSDKSSRPEQFYDPSMLEDPWKV 305
           + G++ P  G    RG        G+   FG  G R   +  +  E+FY  SM EDPWK 
Sbjct: 241 WGGNTYPNSGRGRSRGR-------GMNTSFGRDGGRRPMEPGA--ERFYSNSMAEDPWKH 283

Query: 306 LQPGIWRPVAPLRSSANPSESWISK-FNTKKARVLDASSGRSGSQPSLAEYLAASFNEA 357
           L+P +W+  +   SS++  ++W+ K    KK+   +A+   S +Q SLAEYLAAS + A
Sbjct: 301 LKPVLWKNCSDASSSSSTGQAWLPKSIAPKKSVTSEATHKTSSNQQSLAEYLAASLDGA 283

The following BLAST results are available for this feature:

BLAST of CmaCh02G004650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB47	2.5e-25	36.57	Protein SICKLE OS=Arabidopsis thaliana OX=3702 GN=SIC PE=1 SV=1	[more]

BLAST of CmaCh02G004650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24500.1	1.7e-26	36.57	hydroxyproline-rich glycoprotein family protein	[more]
AT4G24500.3	1.7e-26	36.57	hydroxyproline-rich glycoprotein family protein	[more]
AT4G24500.2	2.6e-14	31.75	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 6..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..250
IPR028265	TTDN1/Protein SICKLE	PFAM	PF15502	MPLKIP	coord: 271..302 e-value: 4.1E-7 score: 30.1
IPR039292	Protein SICKLE	PANTHER	PTHR36054	PROTEIN SICKLE	coord: 6..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G004650.1	CmaCh02G004650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:1903730	regulation of phosphatidate phosphatase activity
cellular_component	GO:0016020	membrane