CmaCh02G003560 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACTGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCATAGGCTACAACACTGGCGCCAGATGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGACGTCCCTGCCGGTCACATCGCCGTCTGTGTCGGCAGCGAATGTCGGCGGTTCATCGTCCGCGCTACCTTCCTGAACCATCCGATCTTCCAGAAGCTTCTCTCGGAAGCCGAAGAAGAATACGGATTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATATCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAAACCTTTACTGTATGGATTTGCCGATAATAAATCCGTTTGTTGA ATGTCACTGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCATAGGCTACAACACTGGCGCCAGATGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGACGTCCCTGCCGGTCACATCGCCGTCTGTGTCGGCAGCGAATGTCGGCGGTTCATCGTCCGCGCTACCTTCCTGAACCATCCGATCTTCCAGAAGCTTCTCTCGGAAGCCGAAGAAGAATACGGATTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATATCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAAACCTTTACTGTATGGATTTGCCGATAATAAATCCGTTTGTTGA ATGTCACTGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCATAGGCTACAACACTGGCGCCAGATGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGACGTCCCTGCCGGTCACATCGCCGTCTGTGTCGGCAGCGAATGTCGGCGGTTCATCGTCCGCGCTACCTTCCTGAACCATCCGATCTTCCAGAAGCTTCTCTCGGAAGCCGAAGAAGAATACGGATTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATATCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAAACCTTTACTGTATGGATTTGCCGATAATAAATCCGTTTGTTGA MSLETAKSNNIRRIVRLRHRLQHWRQMARVASSRAPPSDVPAGHIAVCVGSECRRFIVRATFLNHPIFQKLLSEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDWQRRCDEDIRKNSEFLGESKPLLYGFADNKSVC Homology
BLAST of CmaCh02G003560 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.8e-12 Identity = 38/94 (40.43%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of CmaCh02G003560 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12 Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of CmaCh02G003560 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12 Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of CmaCh02G003560 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of CmaCh02G003560 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12 Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of CmaCh02G003560 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 151.0 bits (380), Expect = 7.8e-37 Identity = 79/150 (52.67%), Postives = 105/150 (70.00%), Query Frame = 0
BLAST of CmaCh02G003560 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 147.9 bits (372), Expect = 6.6e-36 Identity = 75/144 (52.08%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of CmaCh02G003560 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 135.6 bits (340), Expect = 3.4e-32 Identity = 75/152 (49.34%), Postives = 100/152 (65.79%), Query Frame = 0
BLAST of CmaCh02G003560 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 135.6 bits (340), Expect = 3.4e-32 Identity = 75/152 (49.34%), Postives = 100/152 (65.79%), Query Frame = 0
BLAST of CmaCh02G003560 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 135.6 bits (340), Expect = 3.4e-32 Identity = 71/142 (50.00%), Postives = 94/142 (66.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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