CmaCh02G002650 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G002650
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPre-mRNA-splicing factor SYF2
LocationCma_Chr02: 1198444 .. 1200245 (-)
RNA-Seq ExpressionCmaCh02G002650
SyntenyCmaCh02G002650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTTTATTTGCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCAGAAGTCAAAGCCCTGAATCAGAAAAATGAGCCAGGTTTTTTCACATGCTACAATTTCTTTGCAACTTCCTTGAACATAATGACTTCTCTTATTGTAGCTGACAATTTCATTATTTATCACTATCTATCCTTTTGTCTAATTTGTTAACGTTTTCTTGGAATTACGTAGCTTTTTTAACATTGCTAAAAATTGGCCCTATAAATTGCATAACCATTCCTCCTCCACCTTTCAAATTCAAGTGATATCATTGGTGGTCTTTTTCTCTTATCTCATGTTAATGTTTTTTTGTGAATTTTGATCACAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTTCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGGTAATTTTCTACATTTTTCAAAAGTAGCTAACAATTCCTATCAAGTGTCAAGTAATGACTTATGGATCCATGGATGCAGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCAACAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGGTGAGTCTCTATCTGTACTACAAATTTACACTATGGTGATCTTAGCTGCTTTTTTATGGAAAAATACATTTTTTAATAATTTGACTAGATTCCTTAATTTGCTAGTTGATGACGAACACATGATTTGATCTAGGATATAGATATTGTGAATCTGATTGTGAATTGAAAAAACTTCGTACTTAAAGTACTGGTGTTTCTCACTGTATAAAGCTATTTAAGTGTTTGTTTAATTATGAATCGCGTTATATCCCAAAGTAATCACATTTTTTGGGGGGAGGACTTGGATATAAAGTTTGCTTAATTGGTTGTATTTTATGTATTTGTTTTTAATATGTAAATACTTATCTAAAAGGGTTAAACTGCTTTGGTTTTAACAGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTCAATGTTGACATTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGTACTGTTAGTTCCACTGTATAGTTTCGATCATATGTGTAATTATCAGATTTCTGAGGATATAGATCTTGTGTCACTATCCTACAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAA

mRNA sequence

ATGACTCTTTATTTGCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCAGAAGTCAAAGCCCTGAATCAGAAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTTCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCAACAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTCAATGTTGACATTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAA

Coding sequence (CDS)

ATGACTCTTTATTTGCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCAGAAGTCAAAGCCCTGAATCAGAAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTTCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCAACAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTCAATGTTGACATTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAA

Protein sequence

MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Homology
[Close]
BLAST of CmaCh02G002650 vs. ExPASy Swiss-Prot
Match: Q8AVQ6 (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 86/219 (39.27%), Postives = 125/219 (57.08%), Query Frame = 0 

Query: 113 KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPT--ESRGISKQKWLEDRKKKIGK 172
           K   R +K  EL LK NEARK N   +  E K+ + P+  E+R    +  L++ +KK  +
Sbjct: 26  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--R 85

Query: 173 LLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNV 232
              ANG+D  +A +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 86  ECAANGVDFERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQLRQ-YQRLTKQIKP 145

Query: 233 DIEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHE 292
           D+EEY   KE   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++
Sbjct: 146 DMEEYEMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 205

Query: 293 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 328
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 206 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 240

[Close]
BLAST of CmaCh02G002650 vs. ExPASy Swiss-Prot
Match: Q28G05 (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.8e-25
Identity = 85/219 (38.81%), Postives = 125/219 (57.08%), Query Frame = 0 

Query: 113 KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPT--ESRGISKQKWLEDRKKKIGK 172
           K   R +K  EL LK NEARK N   +  E K+ + P+  E+R    +  L++ +KK  +
Sbjct: 35  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--R 94

Query: 173 LLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNV 232
              ANG+D  +A +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 95  ECAANGVDYERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQLRQ-YQRLTKQIKP 154

Query: 233 DIEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHE 292
           D+EEY   K+   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++
Sbjct: 155 DMEEYEMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 214

Query: 293 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 328
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 215 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]
BLAST of CmaCh02G002650 vs. ExPASy Swiss-Prot
Match: Q6DV01 (Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-23
Identity = 81/215 (37.67%), Postives = 127/215 (59.07%), Query Frame = 0 

Query: 119 KKLFELRLKMNEARKANQTAIAAEKKKMEPPTE-SRGISKQKW---LEDRKKKIGKLLDA 178
           +K  EL LK NEARK N   +  E K+++ P       S+ +W   +E++KK+      A
Sbjct: 41  RKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKSRLEWELKVEEKKKE----CVA 100

Query: 179 NGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEY 238
            G D  +  +L+ + E AE   +K +K     G+  +    +   Y++ T+ +  D+E+Y
Sbjct: 101 KGEDYERVKLLEISAEDAERFERKRKKRNPDLGFSDYAAAQMRQ-YQRLTRQIKPDLEKY 160

Query: 239 NKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDI 298
            K++ ES  EFY  ++SL +G      E  +D MV++L+ + +KR+ +SRRR +++D DI
Sbjct: 161 AKLREESGEEFYPTSNSLLHGTHVPCKEG-VDKMVEDLEKQIQKREKYSRRRPYNDDADI 220

Query: 299 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 328
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 221 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]
BLAST of CmaCh02G002650 vs. ExPASy Swiss-Prot
Match: Q9D198 (Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-23
Identity = 84/215 (39.07%), Postives = 124/215 (57.67%), Query Frame = 0 

Query: 117 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPT--ESRGISKQKWLEDRKKKIGKLLDA 176
           R +K  EL LK NEARK N   +  E K+++ P   E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 177 NGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEY 236
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQLRQ-YHRLTKQIKPDMESY 151

Query: 237 NKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDI 296
            + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 297 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 328
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]
BLAST of CmaCh02G002650 vs. ExPASy Swiss-Prot
Match: Q4QRB2 (Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-23
Identity = 84/215 (39.07%), Postives = 124/215 (57.67%), Query Frame = 0 

Query: 117 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPT--ESRGISKQKWLEDRKKKIGKLLDA 176
           R +K  EL LK NEARK N   +  E K+++ P   E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 177 NGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEY 236
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQLRQ-YHRLTKQIKPDMESY 151

Query: 237 NKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDI 296
            + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 297 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 328
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]
BLAST of CmaCh02G002650 vs. ExPASy TrEMBL
Match: A0A6J1I290 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111469841 PE=3 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.3e-174
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 74
           MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 60

Query: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 135 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194
           NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 254
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 240

Query: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 315 LEIKNNLERGTALPD 330
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of CmaCh02G002650 vs. ExPASy TrEMBL
Match: A0A6J1G6N2 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111451319 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 9.0e-171
Identity = 308/315 (97.78%), Postives = 313/315 (99.37%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 74
           MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60

Query: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 135 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194
           NQTAIAAEKKKMEPP+ESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 254
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 315 LEIKNNLERGTALPD 330
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of CmaCh02G002650 vs. ExPASy TrEMBL
Match: A0A6J1FXE9 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.7e-166
Identity = 298/315 (94.60%), Postives = 305/315 (96.83%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 74
           MSDEGRVHPDCRNASNPYHEC+EYCFK+IAEVKA NQ+NEPV TSSE VQAGRSS   NF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134
            PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 135 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194
           NQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 254
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 315 LEIKNNLERGTALPD 330
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of CmaCh02G002650 vs. ExPASy TrEMBL
Match: A0A6J1JD37 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.9e-165
Identity = 297/315 (94.29%), Postives = 305/315 (96.83%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 74
           MSDEGRVHPDCRNASNPYHEC+EYCFK+IAEVKA NQ+NEPV TSSE VQAGRSS   NF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134
            PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 135 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194
           NQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 254
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 315 LEIKNNLERGTALPD 330
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of CmaCh02G002650 vs. ExPASy TrEMBL
Match: A0A0A0LJ81 (Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.1e-163
Identity = 293/315 (93.02%), Postives = 305/315 (96.83%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 74
           MSDEGRVHPDCRNASNPYHECSEYCFK+IAE+KA +QKNEPV TSSE VQAGRSS   +F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134
            PPDEYEDLHDEKP+EEGHSDGD DK SG ENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 135 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194
           NQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 254
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+D+EEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314
           APKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 315 LEIKNNLERGTALPD 330
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of CmaCh02G002650 vs. NCBI nr
Match: KAG7027023.1 (Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 637.1 bits (1642), Expect = 8.3e-179
Identity = 323/329 (98.18%), Postives = 327/329 (99.39%), Query Frame = 0 

Query: 1   MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSS 60
           MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSS
Sbjct: 1   MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSS 60

Query: 61  EAVQAGRSSAPFNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKK 120
           EAVQAGRSSAP NFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKK
Sbjct: 61  EAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKK 120

Query: 121 LFELRLKMNEARKANQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMT 180
           LFELRLKMNEARKANQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDMT
Sbjct: 121 LFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMT 180

Query: 181 KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESD 240
           KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMKESD
Sbjct: 181 KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESD 240

Query: 241 PEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE 300
           PEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE
Sbjct: 241 PEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE 300

Query: 301 HFNKKIERAFGRYTLEIKNNLERGTALPD 330
           HFNKKIERAFGRYTLEIKNNLERGTALPD
Sbjct: 301 HFNKKIERAFGRYTLEIKNNLERGTALPD 329

[Close]
BLAST of CmaCh02G002650 vs. NCBI nr
Match: XP_023532640.1 (pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177
Identity = 321/329 (97.57%), Postives = 326/329 (99.09%), Query Frame = 0 

Query: 1   MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSS 60
           MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSS
Sbjct: 1   MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSS 60

Query: 61  EAVQAGRSSAPFNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKK 120
           EAVQAGRSSAP NFAPPDEYEDLHDEKPEEEGHSDGDTDKLSG ENVEGDFTKLTGRKKK
Sbjct: 61  EAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGEENVEGDFTKLTGRKKK 120

Query: 121 LFELRLKMNEARKANQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMT 180
           LFELRLKMNEARKANQTAIAAEKKKMEPP+ESRGISKQKWLE+RKKKIGKLLDANGLDMT
Sbjct: 121 LFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEERKKKIGKLLDANGLDMT 180

Query: 181 KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESD 240
           KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMKESD
Sbjct: 181 KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESD 240

Query: 241 PEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE 300
           PEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE
Sbjct: 241 PEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE 300

Query: 301 HFNKKIERAFGRYTLEIKNNLERGTALPD 330
           HFNKKIERAFGRYTLEIKNNLERGTALPD
Sbjct: 301 HFNKKIERAFGRYTLEIKNNLERGTALPD 329

[Close]
BLAST of CmaCh02G002650 vs. NCBI nr
Match: XP_022971056.1 (pre-mRNA-splicing factor syf2-like [Cucurbita maxima])

HSP 1 Score: 622.1 bits (1603), Expect = 2.8e-174
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 74
           MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 60

Query: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 135 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194
           NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 254
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 240

Query: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 315 LEIKNNLERGTALPD 330
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of CmaCh02G002650 vs. NCBI nr
Match: XP_022947463.1 (pre-mRNA-splicing factor syf2-like [Cucurbita moschata])

HSP 1 Score: 609.4 bits (1570), Expect = 1.9e-170
Identity = 308/315 (97.78%), Postives = 313/315 (99.37%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 74
           MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60

Query: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 135 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194
           NQTAIAAEKKKMEPP+ESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 254
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 315 LEIKNNLERGTALPD 330
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of CmaCh02G002650 vs. NCBI nr
Match: XP_023532641.1 (pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606.7 bits (1563), Expect = 1.2e-169
Identity = 307/315 (97.46%), Postives = 312/315 (99.05%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 74
           MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60

Query: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134
           APPDEYEDLHDEKPEEEGHSDGDTDKLSG ENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGEENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 135 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194
           NQTAIAAEKKKMEPP+ESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEERKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 254
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 315 LEIKNNLERGTALPD 330
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of CmaCh02G002650 vs. TAIR 10
Match: AT2G16860.1 (GCIP-interacting family protein )

HSP 1 Score: 416.0 bits (1068), Expect = 2.8e-116
Identity = 222/316 (70.25%), Postives = 249/316 (78.80%), Query Frame = 0 

Query: 15  MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKA-LNQKNEPVATSSEAVQAGRSSAPFN 74
           M  E RVHPDC NASNPYHEC EYCFK IAE KA   ++N  +A   E  +         
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEKQNTGLAKVHEQTR--------- 60

Query: 75  FAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARK 134
             P D+     D   EEE   D    ++        D T+LTGR+KKLFELRLKMNEARK
Sbjct: 61  -EPLDDKRIEEDSSEEEEEEEDNQEPQV--------DVTQLTGRQKKLFELRLKMNEARK 120

Query: 135 ANQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAES 194
           +NQT + +EKKKME PTE++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAES
Sbjct: 121 SNQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAES 180

Query: 195 KYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYG 254
           KYKKWEK+P P GWDVFNQKTLY+AYKKRTKN+ VD+EEYN+M+ +DPEFYREASSLQYG
Sbjct: 181 KYKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYG 240

Query: 255 KAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY 314
           KAPK S+DKID M KEL DRE+KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+Y
Sbjct: 241 KAPKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKY 298

Query: 315 TLEIKNNLERGTALPD 330
           TLEIKNNLERGTALPD
Sbjct: 301 TLEIKNNLERGTALPD 298

The following BLAST results are available for this feature:
BLAST of CmaCh02G002650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8AVQ61.3e-2539.27Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1[more]
Q28G053.8e-2538.81Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1[more]
Q6DV011.6e-2337.67Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1[more]
Q9D1981.6e-2339.07Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1[more]
Q4QRB21.6e-2339.07Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1[more]
BLAST of CmaCh02G002650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I2901.3e-174100.00Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111469841 PE=3 S... [more]
A0A6J1G6N29.0e-17197.78Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111451319 PE=3... [more]
A0A6J1FXE98.7e-16694.60Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3... [more]
A0A6J1JD371.9e-16594.29Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 S... [more]
A0A0A0LJ811.1e-16393.02Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV... [more]
BLAST of CmaCh02G002650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7027023.18.3e-17998.18Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023532640.12.1e-17797.57pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo][more]
XP_022971056.12.8e-174100.00pre-mRNA-splicing factor syf2-like [Cucurbita maxima][more]
XP_022947463.11.9e-17097.78pre-mRNA-splicing factor syf2-like [Cucurbita moschata][more]
XP_023532641.11.2e-16997.46pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo][more]
BLAST of CmaCh02G002650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G16860.12.8e-11670.25GCIP-interacting family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 263..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..298
NoneNo IPR availablePANTHERPTHR13264:SF5PRE-MRNA-SPLICING FACTOR SYF2coord: 15..329
IPR013260mRNA splicing factor SYF2PFAMPF08231SYF2coord: 175..322
e-value: 3.2E-34
score: 118.6
IPR013260mRNA splicing factor SYF2PANTHERPTHR13264GCIP-INTERACTING PROTEIN P29coord: 15..329

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G002650.1CmaCh02G002650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0071014 post-mRNA release spliceosomal complex
cellular_component GO:0000974 Prp19 complex