CmaCh02G001890 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G001890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	LOB domain-containing protein 2
Location	Cma_Chr02: 863332 .. 864195 (-)
RNA-Seq Expression	CmaCh02G001890
Synteny	CmaCh02G001890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGGCACAACCTTGGAGCTCTGCAGCCCGCCCCGGCCTGCGCGGCGTGCAAGCACCAAAGGAAGAAATGTCACGAAACCTGCCCGTTGGCACCGTACTTCCCGGCCGATCAAAACCGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAGAATGTGAGAGAAGAGGATAGGAGAAAGGCAGTGGAGTCTCTAGTTTGGGAGGCTGTTTGTAGGCAAAATGATCCGGTTTTAGGGCCGTTTGGAGAGTACAAAAGGGTGTTGGAAGAGCTTAAAGTTTGTAAAATGGGTCAAAACCAAAGCCAAAGCTCAAACCCATTTGTGGGGCAAGTGGGTTTGCCTTGTTTTGGTGGGTCCATTAGTAACAATGGGAATGGGATTATGGGACTAATTAATGGAGGGGTTAATGGAAGCCATTTGTTTAATTACCTTCATGATAATCTAAGTGCCATTATTGATTCAAGTCCTTATACTAATTCTTCCACTTATAATTTGCAAAGCCCTGAGAAATTGATGAGATTGCACCAAGATCATAAAGAGATTAGTTCAACCATCGTCGTGCCGTTTCAGCCGCCGCCGCCGCAGCAGCAACAGCAGCATCAGCAGCATTCCAATTTCCACCATTGTTTTTAGCCAACTTTCTCTTTGTTGTTGGTTATATTAAAACCATGAAACTGTTGCCTTTTATTCATGAATTCTCAAGTGATCTTCAAACTTGGTACTTAATTTATGTAAACAGCTTGTAATTTTCGTTTGTTTCTTCCGTTTTAGCGGTTAAACTTTTTACTCAAATGTATAATATATTAATTAGTTGAGTTATGCTTACCTTCACAATAA

mRNA sequence

ATGCAAAGGCACAACCTTGGAGCTCTGCAGCCCGCCCCGGCCTGCGCGGCGTGCAAGCACCAAAGGAAGAAATGTCACGAAACCTGCCCGTTGGCACCGTACTTCCCGGCCGATCAAAACCGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAGAATGTGAGAGAAGAGGATAGGAGAAAGGCAGTGGAGTCTCTAGTTTGGGAGGCTGTTTGTAGGCAAAATGATCCGGTTTTAGGGCCGTTTGGAGAGTACAAAAGGGTGTTGGAAGAGCTTAAAGTTTGTAAAATGGGTCAAAACCAAAGCCAAAGCTCAAACCCATTTGTGGGGCAAGTGGGTTTGCCTTGTTTTGGTGGGTCCATTAGTAACAATGGGAATGGGATTATGGGACTAATTAATGGAGGGGTTAATGGAAGCCATTTGTTTAATTACCTTCATGATAATCTAAGTGCCATTATTGATTCAAGTCCTTATACTAATTCTTCCACTTATAATTTGCAAAGCCCTGAGAAATTGATGAGATTGCACCAAGATCATAAAGAGATTAGTTCAACCATCGTCGTGCCGTTTCAGCCGCCGCCGCCGCAGCAGCAACAGCAGCATCAGCAGCATTCCAATTTCCACCATTTTGAGTTATGCTTACCTTCACAATAA

Coding sequence (CDS)

ATGCAAAGGCACAACCTTGGAGCTCTGCAGCCCGCCCCGGCCTGCGCGGCGTGCAAGCACCAAAGGAAGAAATGTCACGAAACCTGCCCGTTGGCACCGTACTTCCCGGCCGATCAAAACCGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAGAATGTGAGAGAAGAGGATAGGAGAAAGGCAGTGGAGTCTCTAGTTTGGGAGGCTGTTTGTAGGCAAAATGATCCGGTTTTAGGGCCGTTTGGAGAGTACAAAAGGGTGTTGGAAGAGCTTAAAGTTTGTAAAATGGGTCAAAACCAAAGCCAAAGCTCAAACCCATTTGTGGGGCAAGTGGGTTTGCCTTGTTTTGGTGGGTCCATTAGTAACAATGGGAATGGGATTATGGGACTAATTAATGGAGGGGTTAATGGAAGCCATTTGTTTAATTACCTTCATGATAATCTAAGTGCCATTATTGATTCAAGTCCTTATACTAATTCTTCCACTTATAATTTGCAAAGCCCTGAGAAATTGATGAGATTGCACCAAGATCATAAAGAGATTAGTTCAACCATCGTCGTGCCGTTTCAGCCGCCGCCGCCGCAGCAGCAACAGCAGCATCAGCAGCATTCCAATTTCCACCATTTTGAGTTATGCTTACCTTCACAATAA

Protein sequence

MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQVGLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFHHFELCLPSQ

Homology

[Close]

BLAST of CmaCh02G001890 vs. ExPASy Swiss-Prot
Match: Q9LNB9 (LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 2.2e-32
Identity = 75/147 (51.02%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVES 73
           ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFGVSNV KMV+ VREEDR K  +S
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LVWEAVCRQNDPVLGPFGEYKRVLEELKVCK----------------MGQNQSQSSNPFV 133
           L WEA+ RQ DPVLG +GEY+R+ EELK+ K                +  N S + N   
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQPLIGWDNNQRVFNNNSNNKNGLA 143

Query: 134 GQVGLPCFGGSISNNGNGI-MGLINGG 144
                   G S++NNG G+   ++NGG
Sbjct: 144 MTNSSGSGGFSVNNNGVGVNREIVNGG 170

[Close]

BLAST of CmaCh02G001890 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.0e-18
Identity = 54/141 (38.30%), Postives = 81/141 (57.45%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVES 73
           ACAACK+QR+KC   C LAPYFP D++R+F   HK+FGVSN+TK++K++   ++  A+ +
Sbjct: 36  ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHT 95

Query: 74  LVWEAVCRQNDPVLGPFG---------EYKR-----VLEELKVCKMGQNQSQSSNPFV-- 133
           +++++  R NDPV G +G         EY R     VL++L + +   +Q     P +  
Sbjct: 96  IMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQHHHQEPHIQM 155

Query: 134 -GQVGLPCFGGSIS-NNGNGI 137
             Q  L  F  S   NN N I
Sbjct: 156 QEQEDLSSFSSSCDLNNNNSI 176

[Close]

BLAST of CmaCh02G001890 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 47/92 (51.09%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVES 73
           ACAACKHQRKKC + C LA YFP D   +F   HK+FGVSN+TKM+K + E  R  A+E+
Sbjct: 13  ACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAMEN 72

Query: 74  LVWEAVCRQNDPVLGPFGEYKRVLEELKVCKM 106
           L++ A  R  DPV G +    R + +LK CK+
Sbjct: 73  LIYHANARALDPVGGVY----RTICDLK-CKI 99

[Close]

BLAST of CmaCh02G001890 vs. ExPASy Swiss-Prot
Match: Q9STS6 (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.6e-17
Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVES 73
           ACAACK+QR++C   CPLAPYFPA+Q + FQ VH++FGV ++ K+++ + E  + +A++S
Sbjct: 36  ACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKS 95

Query: 74  LVWEAVCRQNDPVLGPFG--------------EYKRVLEELKVCKM----GQNQSQSSN 115
           +++++  R   PV G  G              E K V  +L++ +     GQNQ+Q+ N
Sbjct: 96  IIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYRSQPQNGQNQNQNHN 154

[Close]

BLAST of CmaCh02G001890 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 15  CAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVESL 74
           CAACK  R+KC   C  APYFP DQ ++F  VHKVFG SNVTK++  +    R  AV SL
Sbjct: 10  CAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSL 69

Query: 75  VWEAVCRQNDPVLGPFGEYKRVLEELK 102
            +EA  R  DPV G  G    +  +L+
Sbjct: 70  AYEADMRLRDPVYGCVGVISLLQHQLR 96

[Close]

BLAST of CmaCh02G001890 vs. ExPASy TrEMBL
Match: A0A6J1I7L7 (LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.8e-122
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120
           NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120

Query: 121 GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180
           GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL
Sbjct: 121 GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180

Query: 181 MRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFHH 218
           MRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFHH
Sbjct: 181 MRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFHH 217

[Close]

BLAST of CmaCh02G001890 vs. ExPASy TrEMBL
Match: A0A6J1G604 (LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.5e-119
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120
           NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120

Query: 121 GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180
           GLPCFGG+ISNNGNGI+GLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL
Sbjct: 121 GLPCFGGTISNNGNGIVGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180

Query: 181 MRLHQDHKEISSTIVVPFQPPPP--QQQQQHQQHSNFHH 218
           MRLHQDHKEISSTIVVPFQPPPP  QQQ QHQQH NFHH
Sbjct: 181 MRLHQDHKEISSTIVVPFQPPPPPQQQQHQHQQHPNFHH 219

[Close]

BLAST of CmaCh02G001890 vs. ExPASy TrEMBL
Match: A0A6J1CHJ9 (LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.5e-89
Identity = 176/225 (78.22%), Postives = 193/225 (85.78%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHN  ALQPA ACAACKHQRKKCH+TCPLAPYFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVG- 120
           NVREEDRRKAV+SL+WEAVCRQNDPVLGP+GEY+RVLEELKVCK + QNQSQ  NPF G 
Sbjct: 61  NVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLLSQNQSQGQNPFAGY 120

Query: 121 QVGLPCFGG------SISNNGNGIMGL-INGGVNGSHLFNYLHDNLSAIIDSSPYTNSST 180
           +  +PCFGG      S +NNGNGIMG+ INGGVN S+LFNYLHDNLSAIIDSS Y+NSST
Sbjct: 121 KPIMPCFGGWNNGTNSTNNNGNGIMGININGGVNSSNLFNYLHDNLSAIIDSSHYSNSST 180

Query: 181 YNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFH 217
           YNLQSPEKL+RL QD KEI+S++VVP      QQQ Q QQH NFH
Sbjct: 181 YNLQSPEKLIRLQQD-KEITSSVVVPL-----QQQVQQQQHPNFH 219

[Close]

BLAST of CmaCh02G001890 vs. ExPASy TrEMBL
Match: A0A5D3CE97 (LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00180 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 173/246 (70.33%), Postives = 190/246 (77.24%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHN G LQ  PACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120
           NVREED+RKAV+SL+WEAVCRQNDPVLGP+GEYKRVLEE+KVCK + QNQS  +    GQ
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNG---GQ 120

Query: 121 VGL------PCFG---------------------GSISNNGNGIMGLINGGVNGSHLFNY 180
           VGL      PC G                     G++ NNGNGIMG+INGGVN +HLFNY
Sbjct: 121 VGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNY 180

Query: 181 LHDN-LSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPQQQQQHQQ 218
           LHDN +SAIIDSSPY+NSSTYNLQSPEKLMRL QD KEI+S++V P       QQQQ QQ
Sbjct: 181 LHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQD-KEITSSMVGPL------QQQQQQQ 236

[Close]

BLAST of CmaCh02G001890 vs. ExPASy TrEMBL
Match: A0A1S4E1K1 (LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 173/246 (70.33%), Postives = 190/246 (77.24%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHN G LQ  PACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120
           NVREED+RKAV+SL+WEAVCRQNDPVLGP+GEYKRVLEE+KVCK + QNQS  +    GQ
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNG---GQ 120

Query: 121 VGL------PCFG---------------------GSISNNGNGIMGLINGGVNGSHLFNY 180
           VGL      PC G                     G++ NNGNGIMG+INGGVN +HLFNY
Sbjct: 121 VGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNY 180

Query: 181 LHDN-LSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPQQQQQHQQ 218
           LHDN +SAIIDSSPY+NSSTYNLQSPEKLMRL QD KEI+S++V P       QQQQ QQ
Sbjct: 181 LHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQD-KEITSSMVGPL------QQQQQQQ 236

[Close]

BLAST of CmaCh02G001890 vs. NCBI nr
Match: XP_022971099.1 (LOB domain-containing protein 2 [Cucurbita maxima])

HSP 1 Score: 448.4 bits (1152), Expect = 3.8e-122
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120
           NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120

Query: 121 GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180
           GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL
Sbjct: 121 GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180

Query: 181 MRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFHH 218
           MRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFHH
Sbjct: 181 MRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFHH 217

[Close]

BLAST of CmaCh02G001890 vs. NCBI nr
Match: KAG6604879.1 (LOB domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 437.2 bits (1123), Expect = 8.7e-119
Identity = 214/221 (96.83%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK
Sbjct: 16  MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 75

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120
           NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV
Sbjct: 76  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 135

Query: 121 GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180
           GLPCFGGSISNNGNGI+GLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL
Sbjct: 136 GLPCFGGSISNNGNGIVGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 195

Query: 181 MRLHQDHKEISSTIVVPFQPPPP----QQQQQHQQHSNFHH 218
           MRLHQDHKEISSTIVVPFQPPPP    QQQ QHQQH NFHH
Sbjct: 196 MRLHQDHKEISSTIVVPFQPPPPPPPQQQQHQHQQHPNFHH 236

[Close]

BLAST of CmaCh02G001890 vs. NCBI nr
Match: XP_022947169.1 (LOB domain-containing protein 2 [Cucurbita moschata])

HSP 1 Score: 436.8 bits (1122), Expect = 1.1e-118
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120
           NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120

Query: 121 GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180
           GLPCFGG+ISNNGNGI+GLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL
Sbjct: 121 GLPCFGGTISNNGNGIVGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180

Query: 181 MRLHQDHKEISSTIVVPFQPPPP--QQQQQHQQHSNFHH 218
           MRLHQDHKEISSTIVVPFQPPPP  QQQ QHQQH NFHH
Sbjct: 181 MRLHQDHKEISSTIVVPFQPPPPPQQQQHQHQQHPNFHH 219

[Close]

BLAST of CmaCh02G001890 vs. NCBI nr
Match: XP_023533791.1 (LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 214/221 (96.83%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120
           NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQNQSQSSNPFVGQV 120

Query: 121 GLPCFGGSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180
           GLPCFGGSISNNGNGIMGLINGGVNG+HLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL
Sbjct: 121 GLPCFGGSISNNGNGIMGLINGGVNGTHLFNYLHDNLSAIIDSSPYTNSSTYNLQSPEKL 180

Query: 181 MRLHQDHKEISSTIVVPFQPPPPQQ----QQQHQQHSNFHH 218
           MRL QDHKEISSTIVVPFQPPPPQQ    QQQHQQH NFHH
Sbjct: 181 MRLQQDHKEISSTIVVPFQPPPPQQQQQHQQQHQQHPNFHH 221

[Close]

BLAST of CmaCh02G001890 vs. NCBI nr
Match: XP_022140622.1 (LOB domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 337.4 bits (864), Expect = 9.3e-89
Identity = 176/225 (78.22%), Postives = 193/225 (85.78%), Query Frame = 0


Query: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60
           MQRHN  ALQPA ACAACKHQRKKCH+TCPLAPYFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVG- 120
           NVREEDRRKAV+SL+WEAVCRQNDPVLGP+GEY+RVLEELKVCK + QNQSQ  NPF G 
Sbjct: 61  NVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLLSQNQSQGQNPFAGY 120

Query: 121 QVGLPCFGG------SISNNGNGIMGL-INGGVNGSHLFNYLHDNLSAIIDSSPYTNSST 180
           +  +PCFGG      S +NNGNGIMG+ INGGVN S+LFNYLHDNLSAIIDSS Y+NSST
Sbjct: 121 KPIMPCFGGWNNGTNSTNNNGNGIMGININGGVNSSNLFNYLHDNLSAIIDSSHYSNSST 180

Query: 181 YNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFH 217
           YNLQSPEKL+RL QD KEI+S++VVP      QQQ Q QQH NFH
Sbjct: 181 YNLQSPEKLIRLQQD-KEITSSVVVPL-----QQQVQQQQHPNFH 219

[Close]

BLAST of CmaCh02G001890 vs. TAIR 10
Match: AT1G06280.1 (LOB domain-containing protein 2 )

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33
Identity = 75/147 (51.02%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVES 73
           ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFGVSNV KMV+ VREEDR K  +S
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LVWEAVCRQNDPVLGPFGEYKRVLEELKVCK----------------MGQNQSQSSNPFV 133
           L WEA+ RQ DPVLG +GEY+R+ EELK+ K                +  N S + N   
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQPLIGWDNNQRVFNNNSNNKNGLA 143

Query: 134 GQVGLPCFGGSISNNGNGI-MGLINGG 144
                   G S++NNG G+   ++NGG
Sbjct: 144 MTNSSGSGGFSVNNNGVGVNREIVNGG 170

[Close]

BLAST of CmaCh02G001890 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 )

HSP 1 Score: 92.0 bits (227), Expect = 6.4e-19
Identity = 54/141 (38.30%), Postives = 81/141 (57.45%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVES 73
           ACAACK+QR+KC   C LAPYFP D++R+F   HK+FGVSN+TK++K++   ++  A+ +
Sbjct: 36  ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHT 95

Query: 74  LVWEAVCRQNDPVLGPFG---------EYKR-----VLEELKVCKMGQNQSQSSNPFV-- 133
           +++++  R NDPV G +G         EY R     VL++L + +   +Q     P +  
Sbjct: 96  IMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQHHHQEPHIQM 155

Query: 134 -GQVGLPCFGGSIS-NNGNGI 137
             Q  L  F  S   NN N I
Sbjct: 156 QEQEDLSSFSSSCDLNNNNSI 176

[Close]

BLAST of CmaCh02G001890 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 )

HSP 1 Score: 91.7 bits (226), Expect = 8.3e-19
Identity = 47/92 (51.09%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVES 73
           ACAACKHQRKKC + C LA YFP D   +F   HK+FGVSN+TKM+K + E  R  A+E+
Sbjct: 13  ACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAMEN 72

Query: 74  LVWEAVCRQNDPVLGPFGEYKRVLEELKVCKM 106
           L++ A  R  DPV G +    R + +LK CK+
Sbjct: 73  LIYHANARALDPVGGVY----RTICDLK-CKI 99

[Close]

BLAST of CmaCh02G001890 vs. TAIR 10
Match: AT3G47870.1 (LOB domain-containing protein 27 )

HSP 1 Score: 89.0 bits (219), Expect = 5.4e-18
Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVES 73
           ACAACK+QR++C   CPLAPYFPA+Q + FQ VH++FGV ++ K+++ + E  + +A++S
Sbjct: 36  ACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKS 95

Query: 74  LVWEAVCRQNDPVLGPFG--------------EYKRVLEELKVCKM----GQNQSQSSN 115
           +++++  R   PV G  G              E K V  +L++ +     GQNQ+Q+ N
Sbjct: 96  IIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYRSQPQNGQNQNQNHN 154

[Close]

BLAST of CmaCh02G001890 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-17
Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 15  CAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVESL 74
           CAACK  R+KC   C  APYFP DQ ++F  VHKVFG SNVTK++  +    R  AV SL
Sbjct: 10  CAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSL 69

Query: 75  VWEAVCRQNDPVLGPFGEYKRVLEELK 102
            +EA  R  DPV G  G    +  +L+
Sbjct: 70  AYEADMRLRDPVYGCVGVISLLQHQLR 96

The following BLAST results are available for this feature:

BLAST of CmaCh02G001890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNB9	2.2e-32	51.02	LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=...	[more]
Q9LRW1	9.0e-18	38.30	LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 S...	[more]
Q9SSM9	1.2e-17	51.09	LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=...	[more]
Q9STS6	7.6e-17	37.82	LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 S...	[more]
O04479	2.9e-16	48.28	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]

BLAST of CmaCh02G001890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7L7	1.8e-122	100.00	LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3...	[more]
A0A6J1G604	5.5e-119	97.26	LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE...	[more]
A0A6J1CHJ9	4.5e-89	78.22	LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 P...	[more]
A0A5D3CE97	1.3e-83	70.33	LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S4E1K1	1.3e-83	70.33	LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=...	[more]

BLAST of CmaCh02G001890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971099.1	3.8e-122	100.00	LOB domain-containing protein 2 [Cucurbita maxima]	[more]
KAG6604879.1	8.7e-119	96.83	LOB domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947169.1	1.1e-118	97.26	LOB domain-containing protein 2 [Cucurbita moschata]	[more]
XP_023533791.1	1.5e-118	96.83	LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022140622.1	9.3e-89	78.22	LOB domain-containing protein 2 [Momordica charantia]	[more]

BLAST of CmaCh02G001890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06280.1	1.6e-33	51.02	LOB domain-containing protein 2	[more]
AT3G13850.1	6.4e-19	38.30	LOB domain-containing protein 22	[more]
AT1G72980.1	8.3e-19	51.09	LOB domain-containing protein 7	[more]
AT3G47870.1	5.4e-18	37.82	LOB domain-containing protein 27	[more]
AT1G65620.1	2.0e-17	48.28	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 14..105 e-value: 5.0E-33 score: 113.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 13..114 score: 22.630278
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 10..216
None	No IPR available	PANTHER	PTHR31301:SF135	LOB DOMAIN-CONTAINING PROTEIN 2	coord: 10..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G001890.1	CmaCh02G001890.1	mRNA