
CmaCh01G020310 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGGGATATAATGTGGGCGCTTTACGAACACTTGCTCTGCGTAGTTCAACCGCCATGGCAGTGGCCATAACTAAGAGCTTGGATTCTTGTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCACAATCCACGGCCAACAGAAGAGAAAATGCTAGCCAAGAATGGTTTTCTCTTCCAATTTCAAGAAGGTCTGTAATTTTGATCTCCTCGCTACCTCTCGCTCTTGTTTCCGTATCTCCGTCGTCCGAGGCAAGAGAGAGAAGGAGCAGGAAGACTATTCCTCTCGAGGACTATCTCACCAGCCGTTAGTAGTCTCAATCCTTCATGTATCGTTATCTTCTGAATTTCCTTTTAATACTTCAAATTGGTTGAAAATCCTGAAATCTTGATTAGTAATTACGACCTATTCTTCAAATTATATATCTACATTTTATAATCAACGGAAATAAAGTGGGAGTTTTGTTCGTTACGTGTTCAGCTTCTCGTGGAGTTTACAATTCTGTTTCCAGGACCTTAGAGGGATCTGTTATGTTTATCGATAACAATTTTTAAAAAAAAATTAAAAAAACCCGTCGAAATCTCACTTTAGTCGTTGGAGGATCTGGATTATGAGGAACATTTCTATGCAGCATTTTCTTTGATTCACATTGGCGATGACATTTTGATTGCAGCCAATGGACTGAAGTACTATGATATCGAGGAGGGAAAGGGTCCTGTGGCTGAGAAGGGTTCCACAGTACAGGTAATCTGTTTGGGACATTTTCAGAGCTGTTTTGCCTGTCTTTGAATTTTAACTTTTCTCTGTATTAGCTCTCTATTACAGGTTCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTATCAAGTCGAGAATCTAAACTCTTGGCTGGAAATCGTATAATCGCCCAGGTTCTTGAACATTTTGCTTATGTGAACTTGATTTCGTTCATCAGTTGTTATCGAAAAAATTAGTGTGTACAAATGTGATGTTTAATATTGAAACTACATCATAGGATTAAATTTTCTTTAGTCAACAACTTCAGCTTTTAGGTCAATTCAAGTAACTAAGCGTCTGGATGTAATCTACAATTCATCTTTATTAGTTAGAGAATTCAATTTCTAATGTATGTTGACCCATGGTTTGATCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGAGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGGTAAGTGCATTCTTCTATTCCAAACTTGCACAAGCACATGCTTGATTTGTATGTAATCTTCTTCTTCTCCATTATATTCTCTCAAGTCTTACCTTTTATTTTTGCGAGGATTTCTTTGACTCCATTTTCTTTCTTTGTGCAGCGAACGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAGGGAATGAATGAAATCCCAGTAAGTCCCTAAATTTCAATTGTAGATATTGTCGAAATCTCCATGATATTTTTTCATTTACATAAAGTAAGTCCATCATTTGCTTTTTATTATGTTTGACTTTTTGACCCAGCTATTTTTGAAATTTAGTAACATTTACATGTGAAGGCATGAAAACTCAGGGTCTAAAAAGGTTAGGCCCTGAATTTAAGTTGTAAATGTCAATAATTATCCACTACTTAAAGTACGTCAATCATTTACTTTTTTGTGACTTTTTTGACAGATCAATTATCCACAACTTTTTTTTACAGACTAACTATTTTTAAAACTTTAAAATTGCATTTTTAAAAATTTTTAAGTTAGTAAATGTTAGTGTCGAATTATCCACTAAATAAAGTAAGTCAATCATCTACCTTTTTTCATTTTTTATGCGTGGCTTTTTGACAGATCAACTATTTTTAAAATTGTATGATCACATTTGCATGTGAACCCATGAAAACATGGGATTAAACCCTGGTCTAACTCCTTGTTTGGTTTTGTTGTCATATCATTGAATTTGATCTCGGAACATTGCATTGAAAATGGTTTTTCTTTTATCATGAAACATGCGCATATATATTTGGTTTACTTTTTTTTGCCTATGGTCTTTAGTTTACAAATACCAAACCAAAAGATCTATATACTTCAAGGACAGAATATAAAAAATTGTTTAAGAGAAAAATTGAAACTTCAAATGTACTTTTAAAGTGAATAGAAATTACGAAACCATAAAAAAGTTGTAAAGGGTATATTTCATAAGTTTAAAAAGTATTGGCGGAATTAAAAAAATCATATCTAGTTTATGGACAAAAGCCATAATTTGGCCCCTTTTTGGTATTTTAGTGTAATTAGTGGAGGAATCCAAGAAATGGTGAAGTCAAGTGCCCTTTGGTTTACTTATGTTATTTATGCCAATTAGTGCGTGAAGGGTTGAGATAGAGATAAGATGACAACTTTTGAGTTGTATGGTTATCAGATGTACATGTAATCCTGCTTTGTATTGGCAGCCTGGAGCTACTTTTGAATTGAACATCGAGCTTTTAGAAGTGGTGCAGCCTGAAAAAGGTGGGGCCTGACCTGATTCGAGAAGCTGATTTTGATCCCCCACAGGACAAGAAGTTGAGCATTAGCTGACTTAGTCCTTTGGAAGGACGAGGAGAAGCACATCCTATTCTTGGGTAGGGGGAGTTTTTCAATGGAACCTTGAGCGATTAGTGTCAATAGAACGAAAATGTTAAGACCAGTTATTTTGTATCGTATCTTACCCCGACTGACTCATTGTGACGGTCCTTTAAAATATAACAAAAAGATCCACTCTTCTTGGTGCCAAACGCCGCACCAAATTTCTACTTCGGTCTTTGGCCGTGTCGCCTTTTCTCTGCCCCCCCTCTCTCTTGCTTTAACTTTTGAATCCGGTTGGATATTAATTGATAAGAGGTAGAGGGCGGCTCTGATAGGGAAAACGTGACAGCCTTATTTGTATATTGGTGTTATTGTTTTATCAGCAAAAGGAAAAAGCGGAAGTTTCAAGTGTTGTGGATATCATATTCAGAGAGAGAGACGCAATGAATTGGTGTTGCTGGCAAGGGGGATTGGATTGGATTGGATTGGATTG ATAGGGATATAATGTGGGCGCTTTACGAACACTTGCTCTGCGTAGTTCAACCGCCATGGCAGTGGCCATAACTAAGAGCTTGGATTCTTGTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCACAATCCACGGCCAACAGAAGAGAAAATGCTAGCCAAGAATGGTTTTCTCTTCCAATTTCAAGAAGGTCTGTAATTTTGATCTCCTCGCTACCTCTCGCTCTTGTTTCCGTATCTCCGTCGTCCGAGGCAAGAGAGAGAAGGAGCAGGAAGACTATTCCTCTCGAGGACTATCTCACCAGCCCCAATGGACTGAAGTACTATGATATCGAGGAGGGAAAGGGTCCTGTGGCTGAGAAGGGTTCCACAGTACAGGTTCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTATCAAGTCGAGAATCTAAACTCTTGGCTGGAAATCGTATAATCGCCCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGAGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGCGAACGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAGGGAATGAATGAAATCCCACCTGGAGCTACTTTTGAATTGAACATCGAGCTTTTAGAAGTGGTGCAGCCTGAAAAAGGTGGGGCCTGACCTGATTCGAGAAGCTGATTTTGATCCCCCACAGGACAAGAAGTTGAGCATTAGCTGACTTAGTCCTTTGGAAGGACGAGGAGAAGCACATCCTATTCTTGGGTAGGGGGAGTTTTTCAATGGAACCTTGAGCGATTAGTGTCAATAGAACGAAAATGTTAAGACCAGTTATTTTGTATCGTATCTTACCCCGACTGACTCATTGTGACGGTCCTTTAAAATATAACAAAAAGATCCACTCTTCTTGGTGCCAAACGCCGCACCAAATTTCTACTTCGGTCTTTGGCCGTGTCGCCTTTTCTCTGCCCCCCCTCTCTCTTGCTTTAACTTTTGAATCCGGTTGGATATTAATTGATAAGAGGTAGAGGGCGGCTCTGATAGGGAAAACGTGACAGCCTTATTTGTATATTGGTGTTATTGTTTTATCAGCAAAAGGAAAAAGCGGAAGTTTCAAGTGTTGTGGATATCATATTCAGAGAGAGAGACGCAATGAATTGGTGTTGCTGGCAAGGGGGATTGGATTGGATTGGATTGGATTG ATGGCAGTGGCCATAACTAAGAGCTTGGATTCTTGTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCACAATCCACGGCCAACAGAAGAGAAAATGCTAGCCAAGAATGGTTTTCTCTTCCAATTTCAAGAAGGTCTGTAATTTTGATCTCCTCGCTACCTCTCGCTCTTGTTTCCGTATCTCCGTCGTCCGAGGCAAGAGAGAGAAGGAGCAGGAAGACTATTCCTCTCGAGGACTATCTCACCAGCCCCAATGGACTGAAGTACTATGATATCGAGGAGGGAAAGGGTCCTGTGGCTGAGAAGGGTTCCACAGTACAGGTTCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTATCAAGTCGAGAATCTAAACTCTTGGCTGGAAATCGTATAATCGCCCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGAGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGCGAACGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAGGGAATGAATGAAATCCCACCTGGAGCTACTTTTGAATTGAACATCGAGCTTTTAGAAGTGGTGCAGCCTGAAAAAGGTGGGGCCTGA MAVAITKSLDSCPIHRLLPQIRSQSTANRRENASQEWFSLPISRRSVILISSLPLALVSVSPSSEARERRSRKTIPLEDYLTSPNGLKYYDIEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRIIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGKRTVIVPPEAGYGQKGMNEIPPGATFELNIELLEVVQPEKGGA Homology
BLAST of CmaCh01G020310 vs. ExPASy Swiss-Prot
Match: Q9LM71 (Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP18 PE=1 SV=2) HSP 1 Score: 314.3 bits (804), Expect = 1.1e-84 Identity = 163/214 (76.17%), Postives = 178/214 (83.18%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy Swiss-Prot
Match: Q9SR70 (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-4 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.0e-24 Identity = 70/172 (40.70%), Postives = 89/172 (51.74%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy Swiss-Prot
Match: Q4WHX4 (FK506-binding protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=fpr2 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06 Identity = 40/119 (33.61%), Postives = 51/119 (42.86%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy Swiss-Prot
Match: Q9LDY5 (Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-2 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.1e-06 Identity = 47/217 (21.66%), Postives = 83/217 (38.25%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy Swiss-Prot
Match: Q8LB65 (Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-3 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.0e-05 Identity = 45/202 (22.28%), Postives = 77/202 (38.12%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy TrEMBL
Match: A0A6J1J3Q8 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111481058 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy TrEMBL
Match: A0A6J1FSB4 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111446792 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122 Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy TrEMBL
Match: A0A5D3D8R8 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00450 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 2.7e-113 Identity = 207/227 (91.19%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy TrEMBL
Match: A0A1S3BUM2 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103493843 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 2.7e-113 Identity = 207/227 (91.19%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of CmaCh01G020310 vs. ExPASy TrEMBL
Match: A0A0A0L0S6 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G664330 PE=4 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 3.8e-112 Identity = 206/228 (90.35%), Postives = 218/228 (95.61%), Query Frame = 0
BLAST of CmaCh01G020310 vs. NCBI nr
Match: XP_022982129.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita maxima]) HSP 1 Score: 455.3 bits (1170), Expect = 3.1e-124 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmaCh01G020310 vs. NCBI nr
Match: XP_022941513.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita moschata]) HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122 Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0
BLAST of CmaCh01G020310 vs. NCBI nr
Match: KAG6608648.1 (Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037965.1 Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 448.0 bits (1151), Expect = 5.0e-122 Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0
BLAST of CmaCh01G020310 vs. NCBI nr
Match: XP_023523221.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 447.2 bits (1149), Expect = 8.5e-122 Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of CmaCh01G020310 vs. NCBI nr
Match: XP_038898611.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Benincasa hispida]) HSP 1 Score: 417.9 bits (1073), Expect = 5.5e-113 Identity = 209/228 (91.67%), Postives = 218/228 (95.61%), Query Frame = 0
BLAST of CmaCh01G020310 vs. TAIR 10
Match: AT1G20810.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 314.3 bits (804), Expect = 8.0e-86 Identity = 163/214 (76.17%), Postives = 178/214 (83.18%), Query Frame = 0
BLAST of CmaCh01G020310 vs. TAIR 10
Match: AT3G10060.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 112.8 bits (281), Expect = 3.5e-25 Identity = 70/172 (40.70%), Postives = 89/172 (51.74%), Query Frame = 0
BLAST of CmaCh01G020310 vs. TAIR 10
Match: AT5G13410.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07 Identity = 39/130 (30.00%), Postives = 55/130 (42.31%), Query Frame = 0
BLAST of CmaCh01G020310 vs. TAIR 10
Match: AT1G18170.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 52.8 bits (125), Expect = 4.3e-07 Identity = 47/217 (21.66%), Postives = 83/217 (38.25%), Query Frame = 0
BLAST of CmaCh01G020310 vs. TAIR 10
Match: AT1G73655.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 52.0 bits (123), Expect = 7.4e-07 Identity = 45/202 (22.28%), Postives = 77/202 (38.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|