CmaCh01G019870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G019870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ribonuclease P protein subunit p25-like protein
Location	Cma_Chr01: 12778619 .. 12782199 (-)
RNA-Seq Expression	CmaCh01G019870
Synteny	CmaCh01G019870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTGACGAAAGACGAGGTTTGAAATTTATTATATATTTAAATAAATATTTTGGAAAATAAAAAGGAATATTAGAAGAGAAAATCAGCGAGAACTTGATAGGACCGGGTGAAGTAGTCGGTTAGGGTAGTTTTCGCAATAGTGCCGCTACTATATAAAGGGCGAAACACCAGTGCTGGCGATTTAGGGCGTAACAGAAGAAACAAGCCGTAGAAGAGGGCTCTCGTTTGTGGAGCGGATAATCCTACTTTCAATCGCTGTAAGTCCTCAGATCGAACCTCATAGCTTCAAGTATGCTTCATTTTGCTTGTTTTTGGAGACGACTGTCATCGCACTCTGCACTCTCTCTTTCGTTTTCTGTATTTTACTTCTCTTTCTGGTTCGTAGCTTTTCATTCTATACTCTAGGATGTTTCGATGCTGTTCAATGTTCGTCTCTTTGTTTGTTTTGTGGGTTGGAGCAGTGGGAGATTACTGATTTTGTTTGCATCTGTAAAATCGGATAACTGTCTTGGCTGCGCAGATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAGATTCGGATTACAAGCCAGGGAAGGATGCGCAACTATATCACATATGCCATGACCCTACTTCAGGTTTCTCTCCATATGTTTGGCTTAATTGCTGGGGTTAATTGTCTGTCTAAATCTCTTAATACGTGCTTTGAGTTTTTTTTACTGTAAAATGTCGTCTTACCATGGAATTAACATATTGTGGGTTCTGCATATAATTCGTAGTGTTAATAATAATAAATTGTGTTGGCATCATCAACGAGCTGTTTTGGCACAAAGAAGTGTCATCTTATTTTCACTGTCTTATGTGCAAAATTATGAGTCTCTGTAGTATATGCCCTCCCCTTCTCTCATTGATTGGCGCTAGCTAGTGGAACAAATTGGAAAGTTCATTGTCACGAATCATGCGATATGGCTATTAGTTTTATCAAAATTCATAGTGCTTTCATTTTATGTATAGCTCTAGGAGTTGCTGACCTAAAATATCAAATTCTGTGTTTCTAATCAGTAGTGTTGTTGGTTATCTTTTGCACGATTCAATGGCAGTAGGTCTTTTAGGCATTTAGGTCATAAATCTTTAATTGCTGTTCTGTTTTTTTTAATGCTTGGGTAGACATAATAAAGGATAAATTGCAAATTTTTGTTGTATTTGTACTACGTGCAAGTCAATTTTATTTTCTGAAGAGAGAATGAGACTATGGCATACTCCTTGTTTTAAAGGAAATGCATGGTATTATGTGTATTATATTACATTTATTGATGATAAGAATTTTCATTAATTTGACATTTGACCCATTGCATATATCATACCCTTTTCCGTATATTTTGCAGGAAAAGGGTTCCAATGAAATTGTTTTCAAGGCTATGGGAAGGGCTATAAACAAGACTGTGACCATCGTGGAACTAATCAAGGTTTGCTGTAATAGTTTGAGTTGCTGATGCTGAACCACTTGATACTTTTGAGATTGGGCCTGATAGTGTTTCTGTTGATAAATGCAGAGGCGAATTGTAGGTCTTCATCAGAATACCTCAATTGGCTCCACAGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCGTAAGATAATTTTAAACACTAGTCATGCGAAGATTATTCAAACTAGCCTCTTACTTTATAATACCATATTCATTATTTCAATGACATGAGTCTTTCAACATGTGGAAAATTTTCTTGCTTTGAGCTTTGTTTCATAGAGTTATTTGATTGTTGTTACAGATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACACTTTCAAAGAAAGAATTAAATACATCTTCTGTGGGGTGAGTCCTTACTTGCTATTAAGGTGTCTCATTTTAAATAAATTTGAGACTGTTGAACTTATATGAAGATATTCTCATTTTATTTATTATCTGAAAGTCTATGGCATTAAACATGAACAAGACCTTAAGTTCAATTTCTCTCACAGATTCATTTATTATAATTTGTCAGATATGCAGGGTTTTGCTTACGTAGGGTCTGTGGATTGAATGATTATTACTAATAATTTAAAAATTTTCTGAAGACTTTATTTAAGATTCTTCAGATTTGTTAGTCTTCTACATCTCATAATTGTTAAATGCTTTTCGACAAATAAACAATTTTCTCACACGTAACTATTACCTCAGGTACCAGCCTCCGCTTCCTGCTGAGCTGGTGAAAACATATGTGGAGTACGACTACGAGGGAGGTACTGACATGTCTTATCATATTATTATTTTTTATTATTGGATTATTGTATTGCATATTTGACACCGTTGTTTTTGTATACTGCAGAAGGTTCACCTCATGATCTGGGTCCAGGACGAGGTAGAGAACGGGGCCGTAATGGCAGAGGAAGAGCCCGGGGTAGAGGTGTGTAGCATTTGATTTCATTTCAGTCTTTCTTTAGCCCTTTGTCATGTTATTGTGTATGGAAGATAATGGGTTTTATGGTTAGTGACAGACTTGCAGTGCCAAATATAGGAATTGGAATTTTGTTATTCATTCAGTTTCTTGCATGAAGGAGAGTGAATATGCCCCCGTAACAGTTTGTTTTTATTGTTAAATTGTACTTGTTTTAGGACCCCCAGGCAATGGCTATGTGACAAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGCGGAAATGTAAGAGGGAGGGGTCGAGGGAGGAGTGGTGGTAATTTCCGTGGCCGTGGAAGAGGAGGATACAACGGTCCTCAGTATGATTTACAGCAAGATGGAGGATACAACCAAGACTTACCAGCTCAAGGCCGTGGTATTTTCTTATTTCCTTCTTTCAGTATGGCTTATATTTAATTGATCTTTGATTGGGCTATTTAGCTGGGATATGCAGGTTTTGGTCAATACTTTTTGTATTGAATTAAAGCCGCGAAGGGTTTTAATTCAGCCTTATATTTCAACTATTGCCTTTCTTTTGAGCTTGTGTTCACTTTGGAATTGTTTACATTTTCAGGGCGTGGACGTGGAAGGGGGGGTTTTCGTGGAAGGGGCCGTGGTTTCAGGACTAGTGGAGGACCGATCCAAGCTGCCGCATGAAGTGGTTAAAGGTTAAAATCTTAATTATATGCAATATTATCATTAGGATCCTCTCTTCCTTTAGTTGCTAGTTGCAAGGGACGACCATATTAACAGAGTAGGGATTTGACTTCTTTTATTTTTGCCCTTTGGAGGTGGTAGTTAGATGGAAGAAGTGTTTGAAAGAGCCGCCATGTGAGGGTGGCGACTCGTTTTCTTGTAGACTTAGGTGAGCGGCTGCTTTGACGTTTGTATTTTAGTATTTTTTAAAAAAGAAACTCTTGGCCACATTTTGAGTTCTCTATTACAGTTTCTTTTTTCACCTCTGGTTCCCTCTGATAATATTCTAACCGTTCGCTGTTTTTCAATGCATTTCGAAGTCTACTCTGTTTTTTTAATAGAAGAAATGTTAGGACCACTGGTGGACCAGTGCATTTTGTTTGGCCTATTATCG

mRNA sequence

ATGAACTTGACGAAAGACGAGATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAGATTCGGATTACAAGCCAGGGAAGGATGCGCAACTATATCACATATGCCATGACCCTACTTCAGGAAAAGGGTTCCAATGAAATTGTTTTCAAGGCTATGGGAAGGGCTATAAACAAGACTGTGACCATCGTGGAACTAATCAAGAGGCGAATTGTAGGTCTTCATCAGAATACCTCAATTGGCTCCACAGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACACTTTCAAAGAAAGAATTAAATACATCTTCTGTGGGGTACCAGCCTCCGCTTCCTGCTGAGCTGGTGAAAACATATGTGGAGTACGACTACGAGGGAGAAGGTTCACCTCATGATCTGGGTCCAGGACGAGGTAGAGAACGGGGCCGTAATGGCAGAGGAAGAGCCCGGGGTAGAGGACCCCCAGGCAATGGCTATGTGACAAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGCGGAAATGTAAGAGGGAGGGGTCGAGGGAGGAGTGGTGGTAATTTCCGTGGCCGTGGAAGAGGAGGATACAACGGTCCTCAGTATGATTTACAGCAAGATGGAGGATACAACCAAGACTTACCAGCTCAAGGCCGTGGGCGTGGACGTGGAAGGGGGGGTTTTCGTGGAAGGGGCCGTGGTTTCAGGACTAGTGGAGGACCGATCCAAGCTGCCGCATGAAGTGGTTAAAGGTTAAAATCTTAATTATATGCAATATTATCATTAGGATCCTCTCTTCCTTTAGTTGCTAGTTGCAAGGGACGACCATATTAACAGAGTAGGGATTTGACTTCTTTTATTTTTGCCCTTTGGAGGTGGTAGTTAGATGGAAGAAGTGTTTGAAAGAGCCGCCATGTGAGGGTGGCGACTCGTTTTCTTGTAGACTTAGGTGAGCGGCTGCTTTGACGTTTGTATTTTAGTATTTTTTAAAAAAGAAACTCTTGGCCACATTTTGAGTTCTCTATTACAGTTTCTTTTTTCACCTCTGGTTCCCTCTGATAATATTCTAACCGTTCGCTGTTTTTCAATGCATTTCGAAGTCTACTCTGTTTTTTTAATAGAAGAAATGTTAGGACCACTGGTGGACCAGTGCATTTTGTTTGGCCTATTATCG

Coding sequence (CDS)

ATGAACTTGACGAAAGACGAGATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAGATTCGGATTACAAGCCAGGGAAGGATGCGCAACTATATCACATATGCCATGACCCTACTTCAGGAAAAGGGTTCCAATGAAATTGTTTTCAAGGCTATGGGAAGGGCTATAAACAAGACTGTGACCATCGTGGAACTAATCAAGAGGCGAATTGTAGGTCTTCATCAGAATACCTCAATTGGCTCCACAGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACACTTTCAAAGAAAGAATTAAATACATCTTCTGTGGGGTACCAGCCTCCGCTTCCTGCTGAGCTGGTGAAAACATATGTGGAGTACGACTACGAGGGAGAAGGTTCACCTCATGATCTGGGTCCAGGACGAGGTAGAGAACGGGGCCGTAATGGCAGAGGAAGAGCCCGGGGTAGAGGACCCCCAGGCAATGGCTATGTGACAAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGCGGAAATGTAAGAGGGAGGGGTCGAGGGAGGAGTGGTGGTAATTTCCGTGGCCGTGGAAGAGGAGGATACAACGGTCCTCAGTATGATTTACAGCAAGATGGAGGATACAACCAAGACTTACCAGCTCAAGGCCGTGGGCGTGGACGTGGAAGGGGGGGTTTTCGTGGAAGGGGCCGTGGTTTCAGGACTAGTGGAGGACCGATCCAAGCTGCCGCATGA

Protein sequence

MNLTKDEMDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTSGGPIQAAA

Homology

[Close]

BLAST of CmaCh01G019870 vs. ExPASy Swiss-Prot
Match: Q99JH1 (Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-15
Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 8   MDRYHR-------VEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAM 67
           M++Y R          P  + P D  E+R+    ++RN +  A+  L+   +  +VF   
Sbjct: 1   MEQYRRAGSVELPASSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGS 60

Query: 68  GRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSMIVIT 127
           GRA  K V+  E++KRR+ GLHQ T +      D+W P   + GL PL   RHV  + + 
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVL 120

Query: 128 LSKKELNTSSVGYQPP 135
           LS+  L+ S  GYQPP
Sbjct: 121 LSRDPLDPSECGYQPP 136

[Close]

BLAST of CmaCh01G019870 vs. ExPASy Swiss-Prot
Match: Q2KIR4 (Ribonuclease P protein subunit p25-like protein OS=Bos taurus OX=9913 GN=RPP25L PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.5e-14
Identity = 52/160 (32.50%), Postives = 77/160 (48.12%), Query Frame = 0


Query: 17  PRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKR 76
           P  + P D  E+R+ +  ++RN +  A+  L+   +  +VF   GRA  K V+  E++KR
Sbjct: 17  PMPQLPPDTLEMRVRAGSKIRNLLGLALERLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76

Query: 77  RIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSMIVITLSKKELNTSSVGYQPP 136
           R+ GL+Q T +      D+W P   + GL PL    HV  + + LS+  L+ +  GYQPP
Sbjct: 77  RVPGLYQLTKLRFLQTEDSWVPTSPDTGLDPLTVRSHVPAVWVLLSRDPLDPNEYGYQPP 136

Query: 137 LPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRAR 175
                            G+P DLGP      G   R RAR
Sbjct: 137 -----------------GAPPDLGPTPASSCGPQPRRRAR 159

[Close]

BLAST of CmaCh01G019870 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.2e-14
Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 0


Query: 17  PRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKR 76
           P  + P D  E+R+    ++RN +  A+  L+   +  +VF   GRA  K V+  E++KR
Sbjct: 17  PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76

Query: 77  RIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSMIVITLSKKELNTSSVGYQPP 136
           R+ GLHQ T +      D+W P   + GL PL   RHV  + + LS+  L+ +  GYQPP
Sbjct: 77  RVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136

Query: 137 LPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRAR 175
                            G+P  LG       G   R RAR
Sbjct: 137 -----------------GAPPGLGSMPSSSCGPRSRRRAR 159

[Close]

BLAST of CmaCh01G019870 vs. ExPASy Swiss-Prot
Match: Q91WE3 (Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0


Query: 28  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI 87
           +R+    ++RN + +A   + +  +  IVF   GRA  KTVT  E++KRR+ GLHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 88  GSTDITDTWEPLEEGLLP----------LETTRHVSMIVITLSKKELNTSSVGYQPP 135
               + + W+ L  G  P          L   ++V  + I LSK  L+   +GYQPP
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154

[Close]

BLAST of CmaCh01G019870 vs. ExPASy Swiss-Prot
Match: Q5PPN2 (Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0


Query: 28  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI 87
           +R+    ++RN + +A   + +  +  IVF   GRA  KTVT  E++KRR+ GLHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 88  GSTDITDTWEPLEEGLLP----------LETTRHVSMIVITLSKKELNTSSVGYQPP 135
               + + W+ L  G  P          L   ++V  + I LSK  L+   +GYQPP
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154

[Close]

BLAST of CmaCh01G019870 vs. ExPASy TrEMBL
Match: A0A6J1J1F5 (ribonuclease P protein subunit p25-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481000 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.2e-142
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE
Sbjct: 121 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 180

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 247
           YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 240

Query: 248 GRGGFRGRGRGFRTSGGPIQAAA 271
           GRGGFRGRGRGFRTSGGPIQAAA
Sbjct: 241 GRGGFRGRGRGFRTSGGPIQAAA 263

[Close]

BLAST of CmaCh01G019870 vs. ExPASy TrEMBL
Match: A0A6J1FSH3 (ribonuclease P protein subunit p25-like protein OS=Cucurbita moschata OX=3662 GN=LOC111446464 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 255/263 (96.96%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKT   YDYEGEGSPHD GPGRGRER RNGRGRARGRGPPGNGYVTNE
Sbjct: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 247
           YDDGDWDRNRGGNVRGRGRGRSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240

Query: 248 GRGGFRGRGRGFRTSGGPIQAAA 271
           GRGGFRGRGRGFRT+GGPIQAAA
Sbjct: 241 GRGGFRGRGRGFRTNGGPIQAAA 260

[Close]

BLAST of CmaCh01G019870 vs. ExPASy TrEMBL
Match: A0A0A0LJ75 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G874340 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 252/264 (95.45%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 36  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 95

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELN S
Sbjct: 96  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNKS 155

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKT+VEYDYEGEGSPHD GPGRGR RGRNGRGR+RGRGPPGNG+V NE
Sbjct: 156 SVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANE 215

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQD-LPAQGRGRG 247
           YDDGDWDRNRGGN RGRGRGRSGGNFRGRGRGGYNGPQ+DLQQDGGYNQD LPAQGRGRG
Sbjct: 216 YDDGDWDRNRGGNGRGRGRGRSGGNFRGRGRGGYNGPQFDLQQDGGYNQDMLPAQGRGRG 275

Query: 248 RGRGGFRGRGRGFRTSGGPIQAAA 271
           RGRGG+RGRGRGFRT+GGPIQAAA
Sbjct: 276 RGRGGYRGRGRGFRTNGGPIQAAA 299

[Close]

BLAST of CmaCh01G019870 vs. ExPASy TrEMBL
Match: A0A5A7V7U0 (Ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001350 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 254/273 (93.04%), Postives = 263/273 (96.34%), Query Frame = 0


Query: 1   MNLTKD--EMDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFK 60
           MN ++D  EMDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFK
Sbjct: 1   MNTSQDEGEMDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFK 60

Query: 61  AMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVIT 120
           AMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVIT
Sbjct: 61  AMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVIT 120

Query: 121 LSKKELNTSSVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGP 180
           LSKKELN SSVGYQPPLPAELVKT+VEYDYEGEGSPHD GPGRGR RGRNGRGR+RGRGP
Sbjct: 121 LSKKELNKSSVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGP 180

Query: 181 PGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDL 240
           PGNG+V NEYDDGDWDRNRGGN RGRGRGRSGGNFRGRGRGGYNGPQ+DL QDGGYNQD+
Sbjct: 181 PGNGFVANEYDDGDWDRNRGGNGRGRGRGRSGGNFRGRGRGGYNGPQFDL-QDGGYNQDM 240

Query: 241 -PAQGRGRGRGRGGFRGRGRGFRTSGGPIQAAA 271
            PAQGRGRGRGRGG+RGRGRGFRT+GGPIQAAA
Sbjct: 241 PPAQGRGRGRGRGGYRGRGRGFRTNGGPIQAAA 272

[Close]

BLAST of CmaCh01G019870 vs. ExPASy TrEMBL
Match: A0A6J1ILQ2 (ribonuclease P protein subunit p25-like protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476415 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.1e-133
Identity = 248/263 (94.30%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKT+VEYDYEGEGSPHD GPGRGR RGR+GRGR+RGRGPPGNG+V NE
Sbjct: 121 SVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRSGRGRSRGRGPPGNGFVGNE 180

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 247
           YDDGDWDRNRGGN RGR RGR GGNFRGRGRGGYNGPQ+DLQQDGGYNQD P QGRGRGR
Sbjct: 181 YDDGDWDRNRGGNGRGRVRGRGGGNFRGRGRGGYNGPQFDLQQDGGYNQDFPPQGRGRGR 240

Query: 248 GRGGFRGRGRGFRTSGGPIQAAA 271
           GRGG+RGRGRGFRT+GGPIQAAA
Sbjct: 241 GRGGYRGRGRGFRTNGGPIQAAA 263

[Close]

BLAST of CmaCh01G019870 vs. NCBI nr
Match: XP_022982024.1 (ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982025.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982026.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982027.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982028.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima])

HSP 1 Score: 513.8 bits (1322), Expect = 8.7e-142
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE
Sbjct: 121 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 180

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 247
           YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 240

Query: 248 GRGGFRGRGRGFRTSGGPIQAAA 271
           GRGGFRGRGRGFRTSGGPIQAAA
Sbjct: 241 GRGGFRGRGRGFRTSGGPIQAAA 263

[Close]

BLAST of CmaCh01G019870 vs. NCBI nr
Match: XP_023525730.1 (ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo] >XP_023525731.1 ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo] >XP_023525732.1 ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo] >KAG7037926.1 Ribonuclease P protein subunit p25-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 510.4 bits (1313), Expect = 9.7e-141
Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKTYVEYDYEGEGSPHD GPGRGRERGRNGRGRARGRGPPGNGYVTNE
Sbjct: 121 SVGYQPPLPAELVKTYVEYDYEGEGSPHDQGPGRGRERGRNGRGRARGRGPPGNGYVTNE 180

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 247
           YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 240

Query: 248 GRGGFRGRGRGFRTSGGPIQAAA 271
           GRGGFRGRGRGFRT+GGPIQAAA
Sbjct: 241 GRGGFRGRGRGFRTNGGPIQAAA 263

[Close]

BLAST of CmaCh01G019870 vs. NCBI nr
Match: KAG6608609.1 (Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 510.4 bits (1313), Expect = 9.7e-141
Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 49  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 108

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 109 VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 168

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKTYVEYDYEGEGSPHD GPGRGRERGRNGRGRARGRGPPGNGYVTNE
Sbjct: 169 SVGYQPPLPAELVKTYVEYDYEGEGSPHDQGPGRGRERGRNGRGRARGRGPPGNGYVTNE 228

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 247
           YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR
Sbjct: 229 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 288

Query: 248 GRGGFRGRGRGFRTSGGPIQAAA 271
           GRGGFRGRGRGFRT+GGPIQAAA
Sbjct: 289 GRGGFRGRGRGFRTNGGPIQAAA 311

[Close]

BLAST of CmaCh01G019870 vs. NCBI nr
Match: XP_038900199.1 (ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida])

HSP 1 Score: 493.8 bits (1270), Expect = 9.4e-136
Identity = 252/263 (95.82%), Postives = 258/263 (98.10%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELN S
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNKS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKT+VEYDYEGEGSPHD GPGRGR RGRNGRGR+RGRGPPGNG+V NE
Sbjct: 121 SVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANE 180

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 247
           YDDGDWDRNRGGN RGRGRGRSGGNFRGRGRGGYNGPQ+DLQQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNGRGRGRGRSGGNFRGRGRGGYNGPQFDLQQDGGYNQDLPAQGRGRGR 240

Query: 248 GRGGFRGRGRGFRTSGGPIQAAA 271
           GRGG+RGRGRGFRT+GGPIQAAA
Sbjct: 241 GRGGYRGRGRGFRTNGGPIQAAA 263

[Close]

BLAST of CmaCh01G019870 vs. NCBI nr
Match: XP_022941062.1 (ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_022941063.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_022941064.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_022941065.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_022941066.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata])

HSP 1 Score: 491.5 bits (1264), Expect = 4.6e-135
Identity = 255/263 (96.96%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 187
           SVGYQPPLPAELVKT   YDYEGEGSPHD GPGRGRER RNGRGRARGRGPPGNGYVTNE
Sbjct: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180

Query: 188 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 247
           YDDGDWDRNRGGNVRGRGRGRSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240

Query: 248 GRGGFRGRGRGFRTSGGPIQAAA 271
           GRGGFRGRGRGFRT+GGPIQAAA
Sbjct: 241 GRGGFRGRGRGFRTNGGPIQAAA 260

[Close]

BLAST of CmaCh01G019870 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-84
Identity = 189/265 (71.32%), Postives = 205/265 (77.36%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MD+Y RV KP+A+TPID NEIRITSQGR RNYITYAMTLLQ+KGS E+VFKAMGRAINKT
Sbjct: 1   MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRI  LHQNTSIGSTDITDTWEP EEGLLPLETTRHVSMI ITLSK ELNTS
Sbjct: 61  VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEG-EGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTN 187
           SVGYQ P+P ELVK   + DYEG EGSP     GRGR RGR GRGR RGRG  GN YV  
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGREGSP----GGRGRGRGR-GRGRGRGRGGRGNAYVNV 180

Query: 188 EYDDGDWDRNRG-GNVRGRGRGRSGGNFRGRGRGGYNGP--QYDLQQDGGYNQDLPAQGR 247
           E++DG W+R +  G  RGRGRGRS    RGRGRGGYNGP  +YD  QDGGY  D P + R
Sbjct: 181 EHEDGGWEREQSYGRGRGRGRGRSS---RGRGRGGYNGPPNEYDAPQDGGYGYDAPHEHR 240

Query: 248 G---RG------RGRGGFRG-RGRG 259
           G   RG      +GRGG+ G +GRG
Sbjct: 241 GYDDRGGYDAPPQGRGGYDGPQGRG 257

[Close]

BLAST of CmaCh01G019870 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-81
Identity = 198/319 (62.07%), Postives = 213/319 (66.77%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MD+Y RVEKP+A+TPI ENEIRITS GR RNYITYAM LLQE  SNE++FKAMGRAINK+
Sbjct: 1   MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           VTIVELIKRRI GLHQ TSIGSTDITDTWEP EEGL  +ETTRHVSMI ITLSK++LNTS
Sbjct: 61  VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120

Query: 128 SVGYQPPLPAELVKTYVEYDYEG-EGSPHDLG-----PGRGRERGRNGRGR--------- 187
           SVGYQ P+P E+VK   E DYEG +GSP   G      GRGR RGR GRG          
Sbjct: 121 SVGYQCPIPIEMVKPLAEIDYEGQDGSPRGRGGRRGRGGRGRGRGRGGRGNGPANVEYDD 180

Query: 188 -ARGRGPPGNGYVTNEYDDGDWDRNRGGN--------------------VRGRGRGRSGG 247
             RGRG  GNGYV NEYDDG   R RGG                      RGRGRGR GG
Sbjct: 181 GGRGRGGRGNGYVNNEYDDG--GRGRGGRGSGYVNNEYNDGGMEQDRSYGRGRGRGRGGG 240

Query: 248 NFRGRGRGGYNG---PQYDLQQDG---GYN----------QDLPAQGRGRGRGRGGFRGR 271
              GRGRGGYNG   P Y+ QQDG   GYN             P QGRGRGRGRGG RGR
Sbjct: 241 R-GGRGRGGYNGPPPPYYEAQQDGGDYGYNNVAPPADHGYDGPPPQGRGRGRGRGG-RGR 300

[Close]

BLAST of CmaCh01G019870 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.6e-35
Identity = 123/289 (42.56%), Postives = 149/289 (51.56%), Query Frame = 0


Query: 8   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 67
           MDRY RV KP+ E+PI+ENEIRITS+G +RNYI+YA +LLQEK   +IV KAMG+AI+KT
Sbjct: 1   MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60

Query: 68  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 127
           V I E++K +I GLHQ+ +I S  ITD WEP EEGL P+E TRHVSMI ITLS  ELN  
Sbjct: 61  VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120

Query: 128 SVGYQPPLPAELVK-------------TYVEYDYEGE-------GSPHDLGPGRG--RER 187
           S GYQ P  ++  K              Y  Y  EGE       G   D+   +G  +E+
Sbjct: 121 SPGYQAPAQSDQSKPQYQPQQGRQARLPYNAYGEEGEVVAEGEAGEEVDMETTKGVMKEK 180

Query: 188 GRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSGGNFRGR--------- 247
            +    +       G        D  D      G   G G GR GG   GR         
Sbjct: 181 TKGTIKKIIKTMKVGIQTRAEAVDVVDEAMAIVGGRGGYGGGRDGGYGGGRDDGYGERRN 240

Query: 248 -GRGGYNGPQYDLQQDGGYNQDL-PAQGRGRGRGRGGFRGRGRGFRTSG 264
            G G     +Y   +D GY        G GR  G GG RG  RG R  G
Sbjct: 241 DGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDGYGGRRGGFRGGRGGG 289

The following BLAST results are available for this feature:

BLAST of CmaCh01G019870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99JH1	1.7e-15	34.56	Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp2...	[more]
Q2KIR4	2.5e-14	32.50	Ribonuclease P protein subunit p25-like protein OS=Bos taurus OX=9913 GN=RPP25L ...	[more]
Q8N5L8	7.2e-14	32.50	Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25...	[more]
Q91WE3	1.0e-12	33.33	Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1	[more]
Q5PPN2	1.0e-12	33.33	Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 S...	[more]

BLAST of CmaCh01G019870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J1F5	4.2e-142	100.00	ribonuclease P protein subunit p25-like protein OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FSH3	2.2e-135	96.96	ribonuclease P protein subunit p25-like protein OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LJ75	1.1e-134	95.45	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G874340 PE=4 S...	[more]
A0A5A7V7U0	1.6e-133	93.04	Ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucumis melo var. ...	[more]
A0A6J1ILQ2	2.1e-133	94.30	ribonuclease P protein subunit p25-like protein isoform X2 OS=Cucurbita maxima O...	[more]

BLAST of CmaCh01G019870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982024.1	8.7e-142	100.00	ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982025...	[more]
XP_023525730.1	9.7e-141	99.24	ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG6608609.1	9.7e-141	99.24	Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma...	[more]
XP_038900199.1	9.4e-136	95.82	ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida]	[more]
XP_022941062.1	4.6e-135	96.96	ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_0229410...	[more]

BLAST of CmaCh01G019870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76010.1	1.4e-84	71.32	Alba DNA/RNA-binding protein	[more]
AT1G20220.1	1.1e-81	62.07	Alba DNA/RNA-binding protein	[more]
AT3G07030.1	2.6e-35	42.56	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 21..125 e-value: 3.6E-35 score: 121.9
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 23..136
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 26..90 e-value: 5.8E-20 score: 70.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..270
None	No IPR available	PANTHER	PTHR13516	RIBONUCLEASE P SUBUNIT P25	coord: 8..263
None	No IPR available	PANTHER	PTHR13516:SF14	ALBA DNA/RNA-BINDING PROTEIN	coord: 8..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G019870.1	CmaCh01G019870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding