CmaCh01G019750 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G019750
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcriptional regulator ATRX homolog isoform X1
Location	Cma_Chr01: 12720931 .. 12723691 (+)
RNA-Seq Expression	CmaCh01G019750
Synteny	CmaCh01G019750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATCAAAGTCGGATACCCCGCAGGATTTGAAATAGTTTTCCCGTCTTGTTTTCATCCGAAATTTTGAAAACTCATCACTTTCCTATCGTTCTTCTAAGTCCCAACCCCAGAAGAGTGAGAATCCACCAGTACTCTTCGCCCAAACTGCTTCAGTTGGTAGAATGTCTTCCGAGGATCAAAAGCTGATTAAGAAAACCAAAGTGGAGGTAGACGATGCGGACGACGGAATAAGCCTGGGTACCCTTTTGCAAGAAAAAAGGAAGAAACTCCTAAATGTGGGTCCTAAATCTATCTCAAAGCCGAAGAAGGAAGAAGTTCAGGGAGAAGATGGAGTGGGAAAATCCCCAAATATAAATTGTAGGTCTGCTTCTAAGGGCACCAAGGTTAAAAAAGAAGAGCGTTTCAACTCTGTTGATGATGATTTTGACGAGAAGCCAGCCAAAAAGAGCTCTGCAGCAAAACGTGATATGGTTCGTATATCTTTCTGTGTTCTATGCTCCGATTTTCTTCAACTGTTTCGATTAATGAGCGACTGAAAGTAGAGTAATCGATTTAGGACAATGTAAGGGAGTAGAATATCCCTGGTGGTTGTAAGAAATGTGTTACTCTAGCGTGGAAGCTACAAGGTTTTTAGTGCAGAATTTTGGGTTCTTAATGTGATAATCTCTTCTTCATATACACTGAAAGCTGTTAACATATGTGTTTTCTGAATGGGCTGGGGAGATAGGAACTGAAGAAGAAGAAGAAAGTGAACGAGGAGAAGAGCAAAAGCGCCAAGGGGGAGCTGGAGAGCCAGAAAAAAGAGAAGAAGGAGAAGAAGGTATATGATTTGCCCGGTCAGAAGCGAGATCCCCCAGAAGAGGTATTAAAGAATGATTTGATAGGTATCAGTTTTATGTTTGGGAGTTCTTTAGCTGATGATCTTCATTTGCTCTTGGTTATTCAGAGAGACCCGCTGAGGATCTTTTACGAAACGCTCCACAAGCAAGTTCCCCACAGTGAAATGGCAGAGTTTTGGTAAGAAAACTGCTCTAATTGTTATTTCTTTAGTATTATCAAGAGTAGTTTTGATACCTTGAAGACGTTATGTTAACAAAGATGTTTATGTATGGGCTAAGTTTTCTGAGAACTCTCTAGTAGAACGTGTTTACTGGTTTCCATTTTCATGCCGATGGCTAGTCAGTATGGAACATAACTAGTTGTGTTCATGTTACTTCATGCCATGAACACAACTAGTTACATTGGAGAAACTCATATGTCGAATTCCGCGTTTGATTCAGATGGTTGAATGATGTCTGTTATGTTGCCCGACATAAGATCTTTAACATTCTGTATACTGCAAAGTAGACACTCAGGAGACGTTTATCAACAGGGATTTAGCAGTGTTAGAATGGAGGAGTGACTAATTCAGGAGATGTTTATTGTTTGTACATAACCATCTCATAAATGGGGAAGTGCACAAACGTGTTAGACAGGAATAAAGACTAGATTAAGATGCCATAAGCATGACACAACTCAATGTGCAGTCTGCAGTCCATTCTACCTCATCCTCCTTGGAAGTTTTCTTGTGGTGTTCTGCATGAACTGAGAACAACTAGAAAAGTGGGGCAATTACTCTCTAATTTGCTATTTCATTTGTTACATCTTTAATGAGTCCACGATCTCCCTGCATTTATACTTTGCAGCATCTGATCATCTTGTGTATGTGAGATTCCACATTGGTTGGAGAGAAGAACGAATCATTCCTTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACAATTTGCTAGCGGTGAGCTTCGACTATTACAAATGGTACCAAAATTAGACATGAGGGCTTGGGCTATTACTAATGGTACCAGAATTAGACAGGAGACATAGTGCCTGTGAGGACGCTGGGCCCTCAAGAAGTGTGGATTGTGAGATCCCATATTGGTTGGAGGAGAGAACGAAACATTCCTTATAAAGGTGTGAAAACCTTCCACTAGGCGGAGTGTCAGTGAGGACGTTGGGCCCTCAATGAGGTTGGATTTTGAGATTCCACATTGGTTGTAGAGTAGAACAAAGCATTCTTTATAAGAGTGTGGAAACCTTTCCCTAGTAGACTAAAACCTTGAGGGAAGTCCAAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGAGTTTGAGTTGTTACTATGTACGAGCATAAGTTAATCATGTTTCAAATTTTCGTTTTCTAAAAGGTAGTAATGGAATGAGATTGAGTTTGTTGTTCATCACTACTTAATATTGTGGAGTTTGGTCTGCAGGATGATGGAGTCTGGTTTACTATCCAAAGAAGAAGCAAAGAAAGTTTTTGACAAGAAGCAGAAGAAGGCACCACTGCAAAAGTTGAGTTCCCCAGGGAAGACTGTGACTGCAGTAAAGAGCGTCACGAAGACCACCATTGTCAAGAAAACTGTCCAATCTCCTCCAGTTTCTTCAAATAAGAAGACGATGACAGTGGGCTCCAAAGTTGTGGCAAAACAGTCAACGAAGCGCAATTTGAAAGACGAAAGCTCCGAAGATGAATCAGACGATGACTTCATAATCAGTCGAAGCATGAAAAAGAAACCAAGAGCAGCCTAATTCAGGTGTAAATGGACAAATCCTTCTATTCAGAAACTGATTTAAATCTCTGATTAGTTGTTCCAAAACATTGCATCAATGTTATAATGAGATTGATACTCCTTTGGTCGTTTCTCCCTTGTGTGCGATGTGCTCATGTTTAT

mRNA sequence

CAAAATCAAAGTCGGATACCCCGCAGGATTTGAAATAGTTTTCCCGTCTTGTTTTCATCCGAAATTTTGAAAACTCATCACTTTCCTATCGTTCTTCTAAGTCCCAACCCCAGAAGAGTGAGAATCCACCAGTACTCTTCGCCCAAACTGCTTCAGTTGGTAGAATGTCTTCCGAGGATCAAAAGCTGATTAAGAAAACCAAAGTGGAGGTAGACGATGCGGACGACGGAATAAGCCTGGGTACCCTTTTGCAAGAAAAAAGGAAGAAACTCCTAAATGTGGGTCCTAAATCTATCTCAAAGCCGAAGAAGGAAGAAGTTCAGGGAGAAGATGGAGTGGGAAAATCCCCAAATATAAATTGTAGGTCTGCTTCTAAGGGCACCAAGGTTAAAAAAGAAGAGCGTTTCAACTCTGTTGATGATGATTTTGACGAGAAGCCAGCCAAAAAGAGCTCTGCAGCAAAACGTGATATGGAACTGAAGAAGAAGAAGAAAGTGAACGAGGAGAAGAGCAAAAGCGCCAAGGGGGAGCTGGAGAGCCAGAAAAAAGAGAAGAAGGAGAAGAAGGTATATGATTTGCCCGGTCAGAAGCGAGATCCCCCAGAAGAGAGAGACCCGCTGAGGATCTTTTACGAAACGCTCCACAAGCAAGTTCCCCACAGTGAAATGGCAGAGTTTTGGATGATGGAGTCTGGTTTACTATCCAAAGAAGAAGCAAAGAAAGTTTTTGACAAGAAGCAGAAGAAGGCACCACTGCAAAAGTTGAGTTCCCCAGGGAAGACTGTGACTGCAGTAAAGAGCGTCACGAAGACCACCATTGTCAAGAAAACTGTCCAATCTCCTCCAGTTTCTTCAAATAAGAAGACGATGACAGTGGGCTCCAAAGTTGTGGCAAAACAGTCAACGAAGCGCAATTTGAAAGACGAAAGCTCCGAAGATGAATCAGACGATGACTTCATAATCAGTCGAAGCATGAAAAAGAAACCAAGAGCAGCCTAATTCAGGTGTAAATGGACAAATCCTTCTATTCAGAAACTGATTTAAATCTCTGATTAGTTGTTCCAAAACATTGCATCAATGTTATAATGAGATTGATACTCCTTTGGTCGTTTCTCCCTTGTGTGCGATGTGCTCATGTTTAT

Coding sequence (CDS)

ATGTCTTCCGAGGATCAAAAGCTGATTAAGAAAACCAAAGTGGAGGTAGACGATGCGGACGACGGAATAAGCCTGGGTACCCTTTTGCAAGAAAAAAGGAAGAAACTCCTAAATGTGGGTCCTAAATCTATCTCAAAGCCGAAGAAGGAAGAAGTTCAGGGAGAAGATGGAGTGGGAAAATCCCCAAATATAAATTGTAGGTCTGCTTCTAAGGGCACCAAGGTTAAAAAAGAAGAGCGTTTCAACTCTGTTGATGATGATTTTGACGAGAAGCCAGCCAAAAAGAGCTCTGCAGCAAAACGTGATATGGAACTGAAGAAGAAGAAGAAAGTGAACGAGGAGAAGAGCAAAAGCGCCAAGGGGGAGCTGGAGAGCCAGAAAAAAGAGAAGAAGGAGAAGAAGGTATATGATTTGCCCGGTCAGAAGCGAGATCCCCCAGAAGAGAGAGACCCGCTGAGGATCTTTTACGAAACGCTCCACAAGCAAGTTCCCCACAGTGAAATGGCAGAGTTTTGGATGATGGAGTCTGGTTTACTATCCAAAGAAGAAGCAAAGAAAGTTTTTGACAAGAAGCAGAAGAAGGCACCACTGCAAAAGTTGAGTTCCCCAGGGAAGACTGTGACTGCAGTAAAGAGCGTCACGAAGACCACCATTGTCAAGAAAACTGTCCAATCTCCTCCAGTTTCTTCAAATAAGAAGACGATGACAGTGGGCTCCAAAGTTGTGGCAAAACAGTCAACGAAGCGCAATTTGAAAGACGAAAGCTCCGAAGATGAATCAGACGATGACTTCATAATCAGTCGAAGCATGAAAAAGAAACCAAGAGCAGCCTAA

Protein sequence

MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGKSPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAKGELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLSKEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSKVVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA

Homology

[Close]

BLAST of CmaCh01G019750 vs. ExPASy TrEMBL
Match: A0A6J1J474 (protein PXR1-like OS=Cucurbita maxima OX=3661 GN=LOC111481191 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.2e-137
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK
Sbjct: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK
Sbjct: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
           GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS
Sbjct: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
           KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK
Sbjct: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA
Sbjct: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 277

[Close]

BLAST of CmaCh01G019750 vs. ExPASy TrEMBL
Match: A0A6J1FIR2 (protein PXR1-like OS=Cucurbita moschata OX=3662 GN=LOC111446106 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.7e-133
Identity = 270/277 (97.47%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSSEDQKLIKKTKVEVD+ADDGISLG LLQEKRKKL NVGPKSISKPKKEEVQGEDGVGK
Sbjct: 1   MSSEDQKLIKKTKVEVDEADDGISLGALLQEKRKKLQNVGPKSISKPKKEEVQGEDGVGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SPNINC SASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK
Sbjct: 61  SPNINCGSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
           GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS
Sbjct: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
           KEEAKKVF+KKQKKAPLQKLSSPGKTVT VKSVTKTTIVK TVQSPPVSSNKKTMTVGSK
Sbjct: 181 KEEAKKVFEKKQKKAPLQKLSSPGKTVTTVKSVTKTTIVKNTVQSPPVSSNKKTMTVGSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA
Sbjct: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 277

[Close]

BLAST of CmaCh01G019750 vs. ExPASy TrEMBL
Match: A0A6J1CXC1 (transcriptional regulator ATRX homolog OS=Momordica charantia OX=3673 GN=LOC111015025 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 2.0e-102
Identity = 221/278 (79.50%), Postives = 245/278 (88.13%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSSEDQK IKK+KVE+D+ +DG+SLG++ Q K+KKL N G K +S  KKEE+QGEDGVGK
Sbjct: 1   MSSEDQKPIKKSKVELDEMEDGMSLGSIFQAKKKKLSNGGSKPLSNLKKEELQGEDGVGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKV-NEEKSKSA 120
           SP +   S  KGTKVKKEERFNS DDD+DE P+KKSSAAKRDME KKKKKV  EEKSK++
Sbjct: 61  SPKMGSGSVPKGTKVKKEERFNSSDDDYDETPSKKSSAAKRDMEPKKKKKVKEEEKSKTS 120

Query: 121 KGELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLL 180
           K + ESQKKE++EKKVYDLPGQKRDPPEERDPLRIFYETLHKQ+PHSEMA+FWMMESGLL
Sbjct: 121 KAKQESQKKERREKKVYDLPGQKRDPPEERDPLRIFYETLHKQLPHSEMAQFWMMESGLL 180

Query: 181 SKEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGS 240
           SKEEAKKVF+KKQKKAPLQKLSSP K VTAVKSVTKT IVKKTVQS P+SSNKKT TV S
Sbjct: 181 SKEEAKKVFEKKQKKAPLQKLSSPVKAVTAVKSVTKTAIVKKTVQSSPLSSNKKT-TVDS 240

Query: 241 KVVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           KV+ KQS KR  KDESSEDESDDDFIISRS+KKKPRAA
Sbjct: 241 KVMTKQSKKRKSKDESSEDESDDDFIISRSVKKKPRAA 277

[Close]

BLAST of CmaCh01G019750 vs. ExPASy TrEMBL
Match: A0A5D3E5S8 (Golgin subfamily A member 6-like protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008030 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 6.3e-101
Identity = 215/277 (77.62%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSS+DQK +KK K E+DD+DDG+SLG LLQEKRKKLLNVG K +SKPKKEE+ G DG+GK
Sbjct: 1   MSSQDQKPLKKAKPELDDSDDGMSLGALLQEKRKKLLNVGSKLLSKPKKEELLGVDGLGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SP I+  SA KG+KVKKEERFNSV+DDFDEKPAKKSSAAKRD ELKKKKKV EE+   + 
Sbjct: 61  SPKIDSGSAPKGSKVKKEERFNSVNDDFDEKPAKKSSAAKRDTELKKKKKVKEEEKSKSS 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
            ELES KKE+K+KKVYDLPGQKRDPPEERDPLRIFYE+LHKQ+PHSEMA+FWMMESGLLS
Sbjct: 121 KELESLKKERKQKKVYDLPGQKRDPPEERDPLRIFYESLHKQLPHSEMAQFWMMESGLLS 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
           KEEAK+VF+KKQKKAPLQKLSSP KTV+AVKSVTKT +VKKTVQS P+SSN +T  V SK
Sbjct: 181 KEEAKEVFEKKQKKAPLQKLSSPMKTVSAVKSVTKTAVVKKTVQSSPLSSN-RTTKVDSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VV K S KR  KD+SSED+SDDDF IS+S+KKK RAA
Sbjct: 241 VVMKSSKKRKSKDDSSEDDSDDDFFISQSIKKKARAA 276

[Close]

BLAST of CmaCh01G019750 vs. ExPASy TrEMBL
Match: A0A1S3CRI7 (uncharacterized protein LOC103503875 OS=Cucumis melo OX=3656 GN=LOC103503875 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 6.3e-101
Identity = 215/277 (77.62%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSS+DQK +KK K E+DD+DDG+SLG LLQEKRKKLLNVG K +SKPKKEE+ G DG+GK
Sbjct: 1   MSSQDQKPLKKAKPELDDSDDGMSLGALLQEKRKKLLNVGSKLLSKPKKEELLGVDGLGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SP I+  SA KG+KVKKEERFNSV+DDFDEKPAKKSSAAKRD ELKKKKKV EE+   + 
Sbjct: 61  SPKIDSGSAPKGSKVKKEERFNSVNDDFDEKPAKKSSAAKRDTELKKKKKVKEEEKSKSS 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
            ELES KKE+K+KKVYDLPGQKRDPPEERDPLRIFYE+LHKQ+PHSEMA+FWMMESGLLS
Sbjct: 121 KELESLKKERKQKKVYDLPGQKRDPPEERDPLRIFYESLHKQLPHSEMAQFWMMESGLLS 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
           KEEAK+VF+KKQKKAPLQKLSSP KTV+AVKSVTKT +VKKTVQS P+SSN +T  V SK
Sbjct: 181 KEEAKEVFEKKQKKAPLQKLSSPMKTVSAVKSVTKTAVVKKTVQSSPLSSN-RTTKVDSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VV K S KR  KD+SSED+SDDDF IS+S+KKK RAA
Sbjct: 241 VVMKSSKKRKSKDDSSEDDSDDDFFISQSIKKKARAA 276

[Close]

BLAST of CmaCh01G019750 vs. NCBI nr
Match: XP_022982324.1 (protein PXR1-like [Cucurbita maxima])

HSP 1 Score: 497.7 bits (1280), Expect = 6.6e-137
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK
Sbjct: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK
Sbjct: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
           GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS
Sbjct: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
           KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK
Sbjct: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA
Sbjct: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 277

[Close]

BLAST of CmaCh01G019750 vs. NCBI nr
Match: KAG6608598.1 (hypothetical protein SDJN03_01940, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 487.6 bits (1254), Expect = 6.9e-134
Identity = 272/277 (98.19%), Postives = 274/277 (98.92%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSSEDQKLIKKTKVEVD+ADDGISLG LLQEKRKKL NVGPKSISKPKKEEVQGEDGVGK
Sbjct: 1   MSSEDQKLIKKTKVEVDEADDGISLGALLQEKRKKLQNVGPKSISKPKKEEVQGEDGVGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SPNINC SASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK
Sbjct: 61  SPNINCGSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
           GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS
Sbjct: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
           KEEAKKVF+KKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK
Sbjct: 181 KEEAKKVFEKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA
Sbjct: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 277

[Close]

BLAST of CmaCh01G019750 vs. NCBI nr
Match: XP_023525196.1 (protein PXR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 484.6 bits (1246), Expect = 5.8e-133
Identity = 270/277 (97.47%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSSEDQKLIKKTKVE D+ADDGISLG LLQEKRKKLLNVGPKSISKPKKEEVQGEDG GK
Sbjct: 1   MSSEDQKLIKKTKVEEDEADDGISLGALLQEKRKKLLNVGPKSISKPKKEEVQGEDGAGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SPNINC SASKGTKV+KEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK
Sbjct: 61  SPNINCGSASKGTKVQKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
           GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS
Sbjct: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
           KEEAKKVF+KKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK
Sbjct: 181 KEEAKKVFEKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA
Sbjct: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 277

[Close]

BLAST of CmaCh01G019750 vs. NCBI nr
Match: XP_022940536.1 (protein PXR1-like [Cucurbita moschata])

HSP 1 Score: 484.2 bits (1245), Expect = 7.6e-133
Identity = 270/277 (97.47%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSSEDQKLIKKTKVEVD+ADDGISLG LLQEKRKKL NVGPKSISKPKKEEVQGEDGVGK
Sbjct: 1   MSSEDQKLIKKTKVEVDEADDGISLGALLQEKRKKLQNVGPKSISKPKKEEVQGEDGVGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SPNINC SASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK
Sbjct: 61  SPNINCGSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
           GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS
Sbjct: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
           KEEAKKVF+KKQKKAPLQKLSSPGKTVT VKSVTKTTIVK TVQSPPVSSNKKTMTVGSK
Sbjct: 181 KEEAKKVFEKKQKKAPLQKLSSPGKTVTTVKSVTKTTIVKNTVQSPPVSSNKKTMTVGSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA
Sbjct: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 277

[Close]

BLAST of CmaCh01G019750 vs. NCBI nr
Match: KAG7037915.1 (hypothetical protein SDJN02_01546, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-119
Identity = 252/277 (90.97%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MSSEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGK 60
           MSSEDQKLIKKTKVEVD+ADDGISLG LLQEKRKKL NVGPKSISKPKKEEVQGE+GVGK
Sbjct: 1   MSSEDQKLIKKTKVEVDEADDGISLGALLQEKRKKLQNVGPKSISKPKKEEVQGEEGVGK 60

Query: 61  SPNINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120
           SPNINC SASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK
Sbjct: 61  SPNINCGSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAK 120

Query: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLS 180
           GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPH               
Sbjct: 121 GELESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPH--------------- 180

Query: 181 KEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240
             +AKKVF+KKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK
Sbjct: 181 --KAKKVFEKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKKTMTVGSK 240

Query: 241 VVAKQSTKRNLKDESSEDESDDDFIISRSMKKKPRAA 278
           VVAKQSTKRNLKDESS+DESDDDFIISRSMKKKPRAA
Sbjct: 241 VVAKQSTKRNLKDESSDDESDDDFIISRSMKKKPRAA 260

[Close]

BLAST of CmaCh01G019750 vs. TAIR 10
Match: AT1G19990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). )

HSP 1 Score: 125.6 bits (314), Expect = 6.4e-29
Identity = 114/274 (41.61%), Postives = 161/274 (58.76%), Query Frame = 0


Query: 3   SEDQKLIKKTKVEVDDADDGISLGTLLQEKRKKLLNVGPKSISKPKKEEVQGEDGVGKSP 62
           SED   +K  K++ +  +D  SL +  ++K     N G K   K KKEE   +D   K P
Sbjct: 4   SED---VKAMKMKEEAEEDNKSLSSFAKKKPTNGNNAGSK---KLKKEENDDDDDDNK-P 63

Query: 63  NINCRSASKGTKVKKEERFNSVDDDFDEKPAKKSSAAKRDMELKKKKKVNEEKSKSAKGE 122
             +  S S+   VKK+E    +D D ++KP  K +++   + + K+ K         K E
Sbjct: 64  IKSSVSGSRAKPVKKKE---EIDKDDEKKPVSKRNSS---VGVSKENK---------KPE 123

Query: 123 LESQKKEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWMMESGLLSKE 182
            E + K+K+E+KVYDLPGQKR+ P+ERDPLRIFYE+L+KQ+P S+MA+ W+MESGLL  E
Sbjct: 124 KEEEVKKKRERKVYDLPGQKREQPDERDPLRIFYESLYKQIPTSDMAQIWLMESGLLPAE 183

Query: 183 EAKKVFDKKQKKAPLQKLSSPGKTVTAV-KSVTKT-TIVKKTVQSPP--VSSNKKTMTVG 242
           +AKKV +KK +K    KLSSP K+  +  +S +K+ T+ KK VQ  P    SNKK     
Sbjct: 184 KAKKVLEKKLQKG--GKLSSPVKSAASTPRSNSKSVTVKKKEVQKSPSEALSNKK----- 243

Query: 243 SKVVAKQSTKRNLKDESSEDESDDDFIISRSMKK 273
            K    + T +  K  S +D+SDDDF+ SR  KK
Sbjct: 244 -KGNDSKPTTKKRKKNSDDDDSDDDFLASRVSKK 247

[Close]

BLAST of CmaCh01G019750 vs. TAIR 10
Match: AT5G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 68/159 (42.77%), Postives = 99/159 (62.26%), Query Frame = 0


Query: 115 KSKSAKGELESQK-KEKKEKKVYDLPGQKRDPPEERDPLRIFYETLHKQVPHSEMAEFWM 174
           K+K+    +   K K K+EKKVY L GQK DPPEER+PLRIFYE+L KQ+P SEMAEFW+
Sbjct: 100 KAKTTSATVSLVKGKAKREKKVYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAEFWL 159

Query: 175 MESGLLSKEEAKKVFDKKQKKAPLQKLSSPGKTVTAVKSVTKTTIVKKTVQSPPVSSNKK 234
           ME G+LS E+AK+ F+KKQ+K    ++ +P K+               T  S   SS + 
Sbjct: 160 MEHGMLSPEKAKRAFEKKQRKMKQIRMGTPSKSA-------------PTFSSKAESSQRT 219

Query: 235 TMTVGSKVVAKQSTKRNLKDESSEDESDDDFIISRSMKK 273
           + +  + + A++  K+ + D+  +D+ DDDFI+S   +K
Sbjct: 220 SASKNNGLDARK--KKKVVDD--DDDDDDDFILSHKRRK 241

The following BLAST results are available for this feature:

BLAST of CmaCh01G019750 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G019750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J474	3.2e-137	100.00	protein PXR1-like OS=Cucurbita maxima OX=3661 GN=LOC111481191 PE=4 SV=1	[more]
A0A6J1FIR2	3.7e-133	97.47	protein PXR1-like OS=Cucurbita moschata OX=3662 GN=LOC111446106 PE=4 SV=1	[more]
A0A6J1CXC1	2.0e-102	79.50	transcriptional regulator ATRX homolog OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3E5S8	6.3e-101	77.62	Golgin subfamily A member 6-like protein 22 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CRI7	6.3e-101	77.62	uncharacterized protein LOC103503875 OS=Cucumis melo OX=3656 GN=LOC103503875 PE=...	[more]

BLAST of CmaCh01G019750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982324.1	6.6e-137	100.00	protein PXR1-like [Cucurbita maxima]	[more]
KAG6608598.1	6.9e-134	98.19	hypothetical protein SDJN03_01940, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023525196.1	5.8e-133	97.47	protein PXR1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022940536.1	7.6e-133	97.47	protein PXR1-like [Cucurbita moschata]	[more]
KAG7037915.1	1.3e-119	90.97	hypothetical protein SDJN02_01546, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh01G019750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19990.1	6.4e-29	41.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G11600.1	1.1e-20	42.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..277
None	No IPR available	PANTHER	PTHR33828	OS05G0596200 PROTEIN	coord: 1..276
None	No IPR available	PANTHER	PTHR33828:SF2	NUCLEOLIN	coord: 1..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G019750.1	CmaCh01G019750.1	mRNA