CmaCh01G016150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G016150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr01: 11110885 .. 11112692 (+)
RNA-Seq Expression	CmaCh01G016150
Synteny	CmaCh01G016150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTTAGCTTCCTACTTGGTATCAACTCGATGCTTTTGGGACTTAGTGGATTTGTAAATTCTCTAATACAAAATTTAAGGTATTTTACTTCAATGTGTAAGAAGTTTTGATGAGTTCTGTGAGTTTGACATATGCCTGTATGCCTGCCCGCCCCCATCAAACGTAGAAGTATTTGTTCCTGTCTGACCATTGAATCGGTTCAAACCGTTTGCTTAAGGAATAGAGGTTTTTGATATAGTTGTGCACGTTTTTCAATGAAATTTGTCAGGTTGCACTAAGTTACTTACGGATGTATGCATGTAGTTCGGGAATACATTGGGTACACCCTACACACAAGCAGCACCCGAGCGTGAATGAGATGACATGTGAACTATGACATTGAAGATTTAAGGTATTTTAGTTCAATGGGTAAGTTTTGATGAGTTCTAAGCTTGTGAGCCTCCCCCCCCCCTCAAATGTAGAAGTATTTGTTCCTATCTGACTATTGAATCGGTTCAAACCGTTTGTGTAAGGAATAGAGGTTTTTGATGTAGTTGCGCACGTTTTTCAATGGAATTTACTAGGTTGCACTAAGTTTCTTACAGATGTATGCATGTGGTTCAGGAATACATTGGGTACGCCCTACACACAAGTAGCACCCGAGCGTGAATGAGATGACATATTTAAGGTATTTTAGTTCATGTGTAAGTTTTGATGAGTTCTAAGTTTGTGAGTCTGCCATATGCCTGCCTGTCGGTCTGCCCCCATCAAACATAGAAGTATTTGTTCCTGTTTGACCATTGAATCGATTCAAACCGTTTGCTTAAGGAAAGAGGTTTTTGATGTAGTTGCACACGTTTTTCAATGAATTTGCCAGGTTGCGCTAAGTTACTTACGGATTTATGCATGTAGTTCGAGAATACATTGGGTACACCCTACACACAAGTAGCACCCGAGCGTGAATGAGATGAGATGTGAACCATGACATTGAAGATTACCTAGTAGAATAATTGTACCATCACATTTATTTACAAATATATATAATTATAAAAAAATGAATAAATGTGGATGTGTGTGTTTGTAAGTTTGTGGATTGGTTTTTGGTAGGATTAGGGAATTATAATAATGAATTAAAGGGAGTCACATGATGACACGTGAGAGCGGTCCCTCGGTAGTGGAGTTTGCACGTGTTCAACTTGAGATTTCCCTGCTCTTCTCCAATCTTCATTTTTAGCATTTTATGGGAATTTTATATTTAATTTCGAGATTTTGAATTTTCATCCATTTTACCAATTAAAAAGAGATAAATTTACTTTTACCAAGACCGTAAATTATACACTTACTGAAAATGGGCCGAGTAAGTGGGCCGATATTGGCCCAATAGCCTGAACAAATGACTTAACATTTTAGCCCATCTAAGGCCCAAAATCAAAAGAAGGAAAAGGAAAGGAGGAAGAACCCGTGCGTGCCAGCTGTTTAGTACATGTCAGGCTGTCAATCCGAAGATTTCTAAATATAAAAATAAATAAATAAATAGAAAAGCTGTCGAAACAGAAAACGCACAGTTTTGAACATCGTCTCTGAACCATCCGTCTCAATCCAACGGCTTAGATTTAATCTCTCTCTCCACTCTGGTCTTCGTCCTCAACGCAATTATCGCTCCTCTCTCTCTCTCTCTCTCTCTCGCGCGCGCGCGGAGAGAAAAAGAAAAGAAAGAACACAGAAAGAAGGGAAAGAAAAATTATCGAACCCCCAAATTCTCCAGCTCCTTCGGTTTCTTCTCCCTCTATTTCGAATCCTGCTCTCTCAGATTCTTCAGATCTAA

mRNA sequence

ATGTTTCTTAGCTTCCTACTTGGTATCAACTCGATGCTTTTGGGACTTAGTGGATTTGTAAATTCTCTAATACAAAATTTAAGATTTAATCTCTCTCTCCACTCTGGTCTTCGTCCTCAACGCAATTATCGCTCCTCTCTCTCTCTCTCTCTCTCTCGCGCGCGCGCGGAGAGAAAAAGAAAAGAAAGAACACAGAAAGAAGGGAAAGAAAAATTATCGAACCCCCAAATTCTCCAGCTCCTTCGGTTTCTTCTCCCTCTATTTCGAATCCTGCTCTCTCAGATTCTTCAGATCTAA

Coding sequence (CDS)

ATGTTTCTTAGCTTCCTACTTGGTATCAACTCGATGCTTTTGGGACTTAGTGGATTTGTAAATTCTCTAATACAAAATTTAAGATTTAATCTCTCTCTCCACTCTGGTCTTCGTCCTCAACGCAATTATCGCTCCTCTCTCTCTCTCTCTCTCTCTCGCGCGCGCGCGGAGAGAAAAAGAAAAGAAAGAACACAGAAAGAAGGGAAAGAAAAATTATCGAACCCCCAAATTCTCCAGCTCCTTCGGTTTCTTCTCCCTCTATTTCGAATCCTGCTCTCTCAGATTCTTCAGATCTAA

Protein sequence

MFLSFLLGINSMLLGLSGFVNSLIQNLRFNLSLHSGLRPQRNYRSSLSLSLSRARAERKRKERTQKEGKEKLSNPQILQLLRFLLPLFRILLSQILQI

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh01G016150 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G016150 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G016150 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G016150 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 51..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G016150.1	CmaCh01G016150.1	mRNA