CmaCh01G013990 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G013990
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	small glutamine-rich tetratricopeptide repeat-containing protein 2
Location	Cma_Chr01: 9894344 .. 9897295 (-)
RNA-Seq Expression	CmaCh01G013990
Synteny	CmaCh01G013990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAAGGTTATAATTGGTTACCTTCACACAAATGTATCGTTTAGATACTTCGCTTTTTATTATTTAGACGTACTCTTCATGCTTACATTTATCCTTTATTTGATAAAATAAGACATTATTTTTGCAGTCTAATTGATATTCCAATCTCTCTTTTTATAGGCCCAGCTCACTGAAAGGTTCTAATATGGAAAAATATGTTCTGTTTTAGGTAACAGGGCTATGCAGTCAAAACTATTCTCCGACGCAATTGAGTTGTATAGTTGTGCAATCGCACTATGTGAAAATAATGCCATTTACTACTGTAACAGGTAGAATGCTGTAATATCATAAAGAGCATTAATACGAATTGCAATAAAGTATCTAATCGTGCTAGTTAAGGAATTTCTTTTCCTTCTATATGTATGAGATAAGAACTGATTCACTCATACATTCACTTTTCTGAGTTATGCAGATTAGTTTACCACCCTTGTAAACTGAATGCTGTGAAAAAAAAAAAAAAAAAATGCTATCCCATTAGTCATACGAGAAACTTAACATTTGTCAAATTTTCGTAAACATGATTGAGATTCCTGGACATACTTAGGCTTCTCTTACCGCTTATACTTTCAATACTCCATATTATCCAAATATTTTGACATTAAATATTGTCGAATCACAAATACACAGACAAAAATATTGTATGGACGTAAAAATGTATCTGCTCACAACCATTATCTTTATAGTTTCACTTTGTCCTGGTTTACTTGGCTTTTTTTGTCAATTTTAATTTCATTGAAATGTATGGAAGACAGATTCATTGTTGTTATTTTACTCATCCAATTTTGCTTTGATGAATTTTTTTTTTCAATGTCAAAAAAATTAGAACTCCTCAGGGCAGCTGCTTACACTCAAATCCAAAAATACTCTGAAGCAACAAGAGACTCTTTGAAATCCATTGAAATTGACCCAAATTATAGCAAGGCATATAGTCGTCTGGGCTTGGCTTTATATGACCAGGGGAGCTATCGTGATGCTATTGATAAAGGATTTATGAAAGGTTGGTGAGACTTCGAACATTAGAACCCTTGCAGTGCTTTAGGCTAATTAAACTTATGTTCAATTATGAAAGTTTTTGTAGAGAACTATATGTATTTGGAACTGATTAGGTCTTCTTTTTTGCACATACCATGTTTTTTATTACCCATATCGAATGCATTTTAAAATGTCAGCTTTATTGTGCAGCCTTGCAGTTGGATCCAAACAATGAAGCTGTCAGGGAAAATATTCGAGTTAATAGACTGACTTTTATTCTTTCATATTTTTCAATACTGAAAGCTCGGTTTCTTTAAATTAAACAATGCATTGACTTTCACCACCACAACTGGTTTTTCTTTTACTGTAACACTATTATTATTTGAAAATGTTTTATTTCAACTCATCATAGGTAGCTGAACAGAAGTTAAAGGAAGCACAGCGACAAACTCACCATGAGCAGGTACAACGTGCTTTATTTTCTCATGAAACAAACGATCCCTTCACAAAGGATTGTTGGTTCTCAAACTTGTAATAGAAGTTAGTAAGTTCAAGGAAGCCATTGATTGCTCCTCCTATGAGTCGTGGTACAAATATTTGGATTTTGAAGTGCGAATAGGCCACTTCCTTCGGATGGTATAATTTAAGCATTGTAACCACCTAATATAATTGACGGCTCTAGAATGAAAATGATCTCGATCTCTTCCAAATTCAAGATAAAAAAAAAATGTTGCCATGTTTTTGTCTATGTCAACTCCTATTCATTGTGTTGCTCTCTCCTCAGAATCCTACTACTTTACTAGTTCTCACTTAATAATCAACACTATCTAGTGGTCATGGGTCAGAATTCTTAAAGCCCAGAGTAAGTTGTTTTTCCGTAATGATCAAGTATGTAATATCTTTCTGTGGCCATATAAGACTGCTGGAAAATTTACTTCATTAATGTGATGTGAATGAAATGGCTTCAGGAGCCAAAAGTGCCATTGTTCAGCCACTTGAACTTAGTAGAAATGTTGCAAATGCGATCCAATTTGAATATGTAATGAGCAGTAGCCTGCTAATTTTTGCTATGGTTTTGTTTGCTCATCCTTCTGCTAACTCCACTACAATTTATCTTCCATGGATTTAATTCTATGCAGGGTTCATCCAGTCGAAGTCAAGAATCCCAATACCAGCAGTCTAGTGGAGCGTCAAGGAATGACAGCCCTTCACCTCCCTTCCCTTCTATGCCCTTTAATGGCACTTTACCTTCCGAAATCTCAAACATATTCATGAACATGGCTGCTAACCATGGGCAACATACCGGAGTCGGGGGAGAAGAGAACAGAAGCGGAAATGGATCAGCAGATGATCCAAGAACAAATATGGATGCAAATTTCAGTTTCAGCGTTGGAGATGGAATGCCACAGGATCTCAATGGTGCTTTGAGATCTATGATGCAGATGTTCACCGGTGCAGCCCCCGGTGGAAACCCTCAGGATAACATCAATAGAAGACCCCCACAAGGCTGAAACCTTCAGGTCGGTATGTTGTTGCGCCGGGTCCCCTCTATTTGACTTTTTTCTTTTTTATTCAGTTGACTTCGATTTCCTTTATATCTTATAGGCATGAATCTTTGAATTAAAAAACTAGGGGGCCTTGAACAGATTCACCCTTCAAATAAATATGCTAGTTCTCGTCTTTTTTAAAGAAAAAAAAGCTAGTGAATGGTTGTTCTCAGGTACGGTCAATGGCCGAAAAATGAACAATTTATTCCGTTTTCTGTTATTTTTGTCATTTTCGATCTTAGAAGTGAATTCGATCTTTTTGTCCAAGTCAATTCCTTAACTCGGCCTCTGTCTCAATTATTCTTTTTATATGCAAGTCTGACCTAATCGATATGGGCTAGATCGATGCAAGCCGAGTATGATATAACATTTTCATTTTATTATTTCAAAG

mRNA sequence

ATGGTAACAGGGCTATGCAGTCAAAACTATTCTCCGACGCAATTGAGTTGTATAGTTGTGCAATCGCACTATGTGAAAATAATGCCATTTACTACTGTAACAGAACTCCTCAGGGCAGCTGCTTACACTCAAATCCAAAAATACTCTGAAGCAACAAGAGACTCTTTGAAATCCATTGAAATTGACCCAAATTATAGCAAGGCATATAGTCGTCTGGGCTTGGCTTTATATGACCAGGGGAGCTATCGTGATGCTATTGATAAAGGATTTATGAAAGCCTTGCAGTTGGATCCAAACAATGAAGCTGTCAGGGAAAATATTCGAGTAGCTGAACAGAAGTTAAAGGAAGCACAGCGACAAACTCACCATGAGCAGGGTTCATCCAGTCGAAGTCAAGAATCCCAATACCAGCAGTCTAGTGGAGCGTCAAGGAATGACAGCCCTTCACCTCCCTTCCCTTCTATGCCCTTTAATGGCACTTTACCTTCCGAAATCTCAAACATATTCATGAACATGGCTGCTAACCATGGGCAACATACCGGAGTCGGGGGAGAAGAGAACAGAAGCGGAAATGGATCAGCAGATGATCCAAGAACAAATATGGATGCAAATTTCAGTTTCAGCGTTGGAGATGGAATGCCACAGGATCTCAATGGTGCTTTGAGATCTATGATGCAGATGTTCACCGGTGCAGCCCCCGGTGGAAACCCTCAGGATAACATCAATAGAAGACCCCCACAAGGCTGAAACCTTCAGGTCGGTATGTTGTTGCGCCGGGTCCCCTCTATTTGACTTTTTTCTTTTTTATTCAGTTGACTTCGATTTCCTTTATATCTTATAGGCATGAATCTTTGAATTAAAAAACTAGGGGGCCTTGAACAGATTCACCCTTCAAATAAATATGCTAGTTCTCGTCTTTTTTAAAGAAAAAAAAGCTAGTGAATGGTTGTTCTCAGGTACGGTCAATGGCCGAAAAATGAACAATTTATTCCGTTTTCTGTTATTTTTGTCATTTTCGATCTTAGAAGTGAATTCGATCTTTTTGTCCAAGTCAATTCCTTAACTCGGCCTCTGTCTCAATTATTCTTTTTATATGCAAGTCTGACCTAATCGATATGGGCTAGATCGATGCAAGCCGAGTATGATATAACATTTTCATTTTATTATTTCAAAG

Coding sequence (CDS)

ATGGTAACAGGGCTATGCAGTCAAAACTATTCTCCGACGCAATTGAGTTGTATAGTTGTGCAATCGCACTATGTGAAAATAATGCCATTTACTACTGTAACAGAACTCCTCAGGGCAGCTGCTTACACTCAAATCCAAAAATACTCTGAAGCAACAAGAGACTCTTTGAAATCCATTGAAATTGACCCAAATTATAGCAAGGCATATAGTCGTCTGGGCTTGGCTTTATATGACCAGGGGAGCTATCGTGATGCTATTGATAAAGGATTTATGAAAGCCTTGCAGTTGGATCCAAACAATGAAGCTGTCAGGGAAAATATTCGAGTAGCTGAACAGAAGTTAAAGGAAGCACAGCGACAAACTCACCATGAGCAGGGTTCATCCAGTCGAAGTCAAGAATCCCAATACCAGCAGTCTAGTGGAGCGTCAAGGAATGACAGCCCTTCACCTCCCTTCCCTTCTATGCCCTTTAATGGCACTTTACCTTCCGAAATCTCAAACATATTCATGAACATGGCTGCTAACCATGGGCAACATACCGGAGTCGGGGGAGAAGAGAACAGAAGCGGAAATGGATCAGCAGATGATCCAAGAACAAATATGGATGCAAATTTCAGTTTCAGCGTTGGAGATGGAATGCCACAGGATCTCAATGGTGCTTTGAGATCTATGATGCAGATGTTCACCGGTGCAGCCCCCGGTGGAAACCCTCAGGATAACATCAATAGAAGACCCCCACAAGGCTGA

Protein sequence

MVTGLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINRRPPQG

Homology

[Close]

BLAST of CmaCh01G013990 vs. ExPASy Swiss-Prot
Match: Q32LM2 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus OX=9913 GN=SGTA PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 25  VKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRD 84
           +++ P   V    RAAAY+++  Y+ A +D  ++I IDP+YSKAY R+GLAL     + +
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPSYSKAYGRMGLALSSLNKHTE 177

Query: 85  AIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQT 122
           A+   + KAL+LDP+NE  + N++VAE +L+EA   T
Sbjct: 178 AV-AYYRKALELDPDNETYKSNLKVAELRLREAPSPT 213

[Close]

BLAST of CmaCh01G013990 vs. ExPASy Swiss-Prot
Match: Q8VD33 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus OX=10090 GN=Sgtb PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 39/97 (40.21%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 25  VKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRD 84
           +++ P   V    RAAA +++  Y++A +D  K+I ID  YSKAY R+GLAL     + +
Sbjct: 112 IELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEE 171

Query: 85  AIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQT 122
           A+   + KAL LDP N++ + N+++AEQKL+E    T
Sbjct: 172 AV-TSYQKALDLDPENDSYKSNLKIAEQKLREVSSPT 207

[Close]

BLAST of CmaCh01G013990 vs. ExPASy Swiss-Prot
Match: Q80W98 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus OX=10116 GN=Sgtb PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 39/97 (40.21%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 25  VKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRD 84
           +++ P   V    RAAA +++  Y++A +D  K+I ID  YSKAY R+GLAL     + +
Sbjct: 112 IELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEE 171

Query: 85  AIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQT 122
           A+   + KAL LDP N++ + N+++AEQKL+E    T
Sbjct: 172 AV-TSYQKALDLDPENDSYKSNLKIAEQKLREVSSPT 207

[Close]

BLAST of CmaCh01G013990 vs. ExPASy Swiss-Prot
Match: O43765 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens OX=9606 GN=SGTA PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.7e-12
Identity = 41/97 (42.27%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 25  VKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRD 84
           +++ P   V    RAAAY+++  Y+ A +D  ++I IDP YSKAY R+GLAL     + +
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVE 177

Query: 85  AIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQT 122
           A+   + KAL+LDP+NE  + N+++AE KL+EA   T
Sbjct: 178 AV-AYYKKALELDPDNETYKSNLKIAELKLREAPSPT 213

[Close]

BLAST of CmaCh01G013990 vs. ExPASy Swiss-Prot
Match: Q8BJU0 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 4.7e-12
Identity = 40/97 (41.24%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 25  VKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRD 84
           +++ P   V    RAAAY+++  Y  A +D  ++I IDP YSKAY R+GLAL     + +
Sbjct: 119 IELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAE 178

Query: 85  AIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQT 122
           A+   + KAL+LDP+N+  + N+++AE KL+EA   T
Sbjct: 179 AV-AYYKKALELDPDNDTYKSNLKIAELKLREAPSPT 214

[Close]

BLAST of CmaCh01G013990 vs. ExPASy TrEMBL
Match: A0A6J1ISS6 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480278 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 4   GLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP 63
           GLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP
Sbjct: 191 GLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP 250

Query: 64  NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH 123
           NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH
Sbjct: 251 NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH 310

Query: 124 EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG 183
           EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG
Sbjct: 311 EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG 370

Query: 184 GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINR 243
           GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINR
Sbjct: 371 GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINR 430

Query: 244 RPPQG 249
           RPPQG
Sbjct: 431 RPPQG 435

[Close]

BLAST of CmaCh01G013990 vs. ExPASy TrEMBL
Match: A0A6J1FK29 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446452 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.7e-127
Identity = 240/245 (97.96%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 4   GLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP 63
           GLCSQNY+PTQLSCI VQ HYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP
Sbjct: 191 GLCSQNYTPTQLSCIAVQLHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP 250

Query: 64  NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH 123
           NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH
Sbjct: 251 NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH 310

Query: 124 EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG 183
           EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG
Sbjct: 311 EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG 370

Query: 184 GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINR 243
           GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAA G NPQDNINR
Sbjct: 371 GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASGANPQDNINR 430

Query: 244 RPPQG 249
           RPPQG
Sbjct: 431 RPPQG 435

[Close]

BLAST of CmaCh01G013990 vs. ExPASy TrEMBL
Match: A0A6J1J0T2 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480278 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.0e-110
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 38  RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 97
           RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD
Sbjct: 224 RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 283

Query: 98  PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 157
           PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF
Sbjct: 284 PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 343

Query: 158 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 217
           NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL
Sbjct: 344 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 403

Query: 218 NGALRSMMQMFTGAAPGGNPQDNINRRPPQG 249
           NGALRSMMQMFTGAAPGGNPQDNINRRPPQG
Sbjct: 404 NGALRSMMQMFTGAAPGGNPQDNINRRPPQG 434

[Close]

BLAST of CmaCh01G013990 vs. ExPASy TrEMBL
Match: A0A6J1FR00 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446452 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.3e-108
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 38  RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 97
           RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD
Sbjct: 224 RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 283

Query: 98  PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 157
           PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF
Sbjct: 284 PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 343

Query: 158 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 217
           NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL
Sbjct: 344 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 403

Query: 218 NGALRSMMQMFTGAAPGGNPQDNINRRPPQG 249
           NGALRSMMQMFTGAA G NPQDNINRRPPQG
Sbjct: 404 NGALRSMMQMFTGAASGANPQDNINRRPPQG 434

[Close]

BLAST of CmaCh01G013990 vs. ExPASy TrEMBL
Match: A0A6J1C318 (small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111008001 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 3.0e-86
Identity = 181/217 (83.41%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 38  RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 97
           RAAAYTQIQKYSEATRD LKSIEIDPNYSKAYSRLGLALYDQG+YRDAIDKGF+KAL LD
Sbjct: 224 RAAAYTQIQKYSEATRDCLKSIEIDPNYSKAYSRLGLALYDQGNYRDAIDKGFIKALMLD 283

Query: 98  PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 157
           PNNEAVRENIRVAEQKLKEAQRQ+ HEQGSSSRSQESQ  QS G SRND+ SPPFPSMPF
Sbjct: 284 PNNEAVRENIRVAEQKLKEAQRQSQHEQGSSSRSQESQ-NQSGGGSRNDNTSPPFPSMPF 343

Query: 158 NGTLPSEISNIFMNMAAN-----HGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDG 217
           N TLPSEISN+FMNMAAN     HGQH   G EENR+GNG  DDP  +MD NFSFS+GDG
Sbjct: 344 NVTLPSEISNMFMNMAANATTPFHGQHPQDGQEENRNGNG-LDDPGPSMDGNFSFSIGDG 403

Query: 218 MPQDLNGALRSMMQMFTGAAPGGNPQDNINRR-PPQG 249
           MPQDLNGALRSMMQMFTG+AP GNPQD+ NRR PPQG
Sbjct: 404 MPQDLNGALRSMMQMFTGSAPSGNPQDDTNRRSPPQG 438

[Close]

BLAST of CmaCh01G013990 vs. NCBI nr
Match: XP_022980997.1 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 [Cucurbita maxima] >XP_022980998.1 small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 474.9 bits (1221), Expect = 4.1e-130
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 4   GLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP 63
           GLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP
Sbjct: 191 GLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP 250

Query: 64  NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH 123
           NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH
Sbjct: 251 NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH 310

Query: 124 EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG 183
           EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG
Sbjct: 311 EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG 370

Query: 184 GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINR 243
           GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINR
Sbjct: 371 GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINR 430

Query: 244 RPPQG 249
           RPPQG
Sbjct: 431 RPPQG 435

[Close]

BLAST of CmaCh01G013990 vs. NCBI nr
Match: XP_022941046.1 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 [Cucurbita moschata] >XP_022941047.1 small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 464.5 bits (1194), Expect = 5.6e-127
Identity = 240/245 (97.96%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 4   GLCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP 63
           GLCSQNY+PTQLSCI VQ HYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP
Sbjct: 191 GLCSQNYTPTQLSCIAVQLHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDP 250

Query: 64  NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH 123
           NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH
Sbjct: 251 NYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHH 310

Query: 124 EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG 183
           EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG
Sbjct: 311 EQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVG 370

Query: 184 GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPGGNPQDNINR 243
           GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAA G NPQDNINR
Sbjct: 371 GEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASGANPQDNINR 430

Query: 244 RPPQG 249
           RPPQG
Sbjct: 431 RPPQG 435

[Close]

BLAST of CmaCh01G013990 vs. NCBI nr
Match: XP_022980999.1 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 6.2e-110
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 38  RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 97
           RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD
Sbjct: 224 RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 283

Query: 98  PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 157
           PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF
Sbjct: 284 PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 343

Query: 158 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 217
           NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL
Sbjct: 344 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 403

Query: 218 NGALRSMMQMFTGAAPGGNPQDNINRRPPQG 249
           NGALRSMMQMFTGAAPGGNPQDNINRRPPQG
Sbjct: 404 NGALRSMMQMFTGAAPGGNPQDNINRRPPQG 434

[Close]

BLAST of CmaCh01G013990 vs. NCBI nr
Match: XP_023525254.1 (small glutamine-rich tetratricopeptide repeat-containing protein 2 [Cucurbita pepo subsp. pepo] >XP_023525255.1 small glutamine-rich tetratricopeptide repeat-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.4 bits (1038), Expect = 6.9e-109
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 38  RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 97
           RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD
Sbjct: 224 RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 283

Query: 98  PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 157
           PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF
Sbjct: 284 PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 343

Query: 158 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 217
           NGTLPSEISN+FMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL
Sbjct: 344 NGTLPSEISNMFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 403

Query: 218 NGALRSMMQMFTGAAPGGNPQDNINRRPPQG 249
           NGALRSMMQMFTGAAPG NPQDNINRRPPQG
Sbjct: 404 NGALRSMMQMFTGAAPGANPQDNINRRPPQG 434

[Close]

BLAST of CmaCh01G013990 vs. NCBI nr
Match: XP_022941048.1 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 402.5 bits (1033), Expect = 2.6e-108
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 38  RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 97
           RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD
Sbjct: 224 RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLD 283

Query: 98  PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 157
           PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF
Sbjct: 284 PNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPF 343

Query: 158 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 217
           NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL
Sbjct: 344 NGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDL 403

Query: 218 NGALRSMMQMFTGAAPGGNPQDNINRRPPQG 249
           NGALRSMMQMFTGAA G NPQDNINRRPPQG
Sbjct: 404 NGALRSMMQMFTGAASGANPQDNINRRPPQG 434

[Close]

BLAST of CmaCh01G013990 vs. TAIR 10
Match: AT4G08320.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 112/239 (46.86%), Postives = 147/239 (61.51%), Query Frame = 0


Query: 15  LSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGL 74
           L  + + S  + +     V    RAAAYTQI   SEA +D LKSIEIDPNYSKAYSRLGL
Sbjct: 192 LEAVELYSFAIALTDKNAVFYCNRAAAYTQINMCSEAIKDCLKSIEIDPNYSKAYSRLGL 251

Query: 75  ALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHHEQGSSS-RSQE 134
           A Y QG Y +AI+KGF KAL LDP+NE+V+ENIRVAEQK++E Q++    Q +S+  +QE
Sbjct: 252 AYYAQGKYAEAIEKGFKKALLLDPHNESVKENIRVAEQKIREEQQRQRRSQNTSTFYTQE 311

Query: 135 SQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAAN--HGQHT-----GVGGEE 194
            +     G        P   SMP N     ++ ++FMNMA N   G H+     G GG+ 
Sbjct: 312 PEMGGGQGI-------PSQFSMPVN----PDLMSMFMNMAGNTFPGNHSRNNEGGAGGDG 371

Query: 195 NRSGNGSADDPRTNMDANFSFSVG--DGMPQDLNGALRSMMQMFTGAAPG---GNPQDN 241
            R+G   AD+P  ++  N +  +G  + MP+DL+GALRSMMQMF G+  G    NPQD+
Sbjct: 372 TRNG---ADEPEIHVGGNINIDLGGTEQMPEDLSGALRSMMQMFGGSMGGTGNNNPQDS 416

[Close]

BLAST of CmaCh01G013990 vs. TAIR 10
Match: AT4G08320.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-39
Identity = 110/238 (46.22%), Postives = 145/238 (60.92%), Query Frame = 0


Query: 15  LSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGL 74
           L  + + S  + +     V    RAAAYTQI   SEA +D LKSIEIDPNYSKAYSRLGL
Sbjct: 192 LEAVELYSFAIALTDKNAVFYCNRAAAYTQINMCSEAIKDCLKSIEIDPNYSKAYSRLGL 251

Query: 75  ALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQES 134
           A Y QG Y +AI+KGF KAL LDP+NE+V+ENIRVAEQK++E Q++    Q ++S     
Sbjct: 252 AYYAQGKYAEAIEKGFKKALLLDPHNESVKENIRVAEQKIREEQQRQRRSQQNTSTFYTQ 311

Query: 135 QYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAAN--HGQHT-----GVGGEEN 194
           + +   G        P   SMP N     ++ ++FMNMA N   G H+     G GG+  
Sbjct: 312 EPEMGGGQG-----IPSQFSMPVN----PDLMSMFMNMAGNTFPGNHSRNNEGGAGGDGT 371

Query: 195 RSGNGSADDPRTNMDANFSFSVG--DGMPQDLNGALRSMMQMFTGAAPG---GNPQDN 241
           R+G   AD+P  ++  N +  +G  + MP+DL+GALRSMMQMF G+  G    NPQD+
Sbjct: 372 RNG---ADEPEIHVGGNINIDLGGTEQMPEDLSGALRSMMQMFGGSMGGTGNNNPQDS 417

[Close]

BLAST of CmaCh01G013990 vs. TAIR 10
Match: AT4G12400.1 (stress-inducible protein, putative )

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-09
Identity = 30/94 (31.91%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 22  SHYVKIMPFTTVTELL---RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYD 81
           +H+ + +  +    +L   R+A+Y  + +Y EA  D+ K+IE+ P++SK YSRLG A   
Sbjct: 23  THFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAKKTIELKPDWSKGYSRLGAAFIG 82

Query: 82  QGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQ 113
              + +A+D  + K L++DP+NE ++  +  A +
Sbjct: 83  LSKFDEAVD-SYKKGLEIDPSNEMLKSGLADASR 115

[Close]

BLAST of CmaCh01G013990 vs. TAIR 10
Match: AT4G12400.2 (stress-inducible protein, putative )

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-09
Identity = 30/94 (31.91%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 22  SHYVKIMPFTTVTELL---RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYD 81
           +H+ + +  +    +L   R+A+Y  + +Y EA  D+ K+IE+ P++SK YSRLG A   
Sbjct: 23  THFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAKKTIELKPDWSKGYSRLGAAFIG 82

Query: 82  QGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQ 113
              + +A+D  + K L++DP+NE ++  +  A +
Sbjct: 83  LSKFDEAVD-SYKKGLEIDPSNEMLKSGLADASR 115

[Close]

BLAST of CmaCh01G013990 vs. TAIR 10
Match: AT1G62740.1 (stress-inducible protein, putative )

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 30/115 (26.09%), Postives = 60/115 (52.17%), Query Frame = 0


Query: 22  SHYVKIMPFTTVTELL---RAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYD 81
           +H+   +  T    +L   R+AA+  +  Y EA  D+ K++E+ P++ K YSRLG A   
Sbjct: 23  NHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKKTVELKPDWGKGYSRLGAAHLG 82

Query: 82  QGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQE 134
              + +A++  + K L++DP+NE ++  +  A+     ++    +  G + +  E
Sbjct: 83  LNQFDEAVE-AYSKGLEIDPSNEGLKSGLADAKASASRSRASAPNPFGDAFQGPE 136

The following BLAST results are available for this feature:

BLAST of CmaCh01G013990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32LM2	2.1e-12	42.27	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos ta...	[more]
Q8VD33	2.1e-12	40.21	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus mus...	[more]
Q80W98	2.1e-12	40.21	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus ...	[more]
O43765	4.7e-12	42.27	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo s...	[more]
Q8BJU0	4.7e-12	41.24	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus mu...	[more]

BLAST of CmaCh01G013990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ISS6	2.0e-130	100.00	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 OS...	[more]
A0A6J1FK29	2.7e-127	97.96	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 OS...	[more]
A0A6J1J0T2	3.0e-110	100.00	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 OS...	[more]
A0A6J1FR00	1.3e-108	99.05	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 OS...	[more]
A0A6J1C318	3.0e-86	83.41	small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Momordica ...	[more]

BLAST of CmaCh01G013990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980997.1	4.1e-130	100.00	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 [C...	[more]
XP_022941046.1	5.6e-127	97.96	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 [C...	[more]
XP_022980999.1	6.2e-110	100.00	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [C...	[more]
XP_023525254.1	6.9e-109	99.05	small glutamine-rich tetratricopeptide repeat-containing protein 2 [Cucurbita pe...	[more]
XP_022941048.1	2.6e-108	99.05	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [C...	[more]

BLAST of CmaCh01G013990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08320.1	1.6e-39	46.86	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G08320.2	2.1e-39	46.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G12400.1	1.7e-09	31.91	stress-inducible protein, putative	[more]
AT4G12400.2	1.7e-09	31.91	stress-inducible protein, putative	[more]
AT1G62740.1	2.3e-06	26.09	stress-inducible protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	PFAM	PF13431	TPR_17	coord: 56..86 e-value: 7.3E-5 score: 22.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..211
None	No IPR available	PANTHER	PTHR45831	LD24721P	coord: 38..245
None	No IPR available	PANTHER	PTHR45831:SF2	LD24721P	coord: 38..245
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 66..100 e-value: 0.0025 score: 27.0 coord: 32..65 e-value: 17.0 score: 12.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 22..149 e-value: 7.0E-23 score: 83.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 26..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G013990.1	CmaCh01G013990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006620	posttranslational protein targeting to endoplasmic reticulum membrane
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
cellular_component	GO:0016020	membrane
cellular_component	GO:0072380	TRC complex
molecular_function	GO:0060090	molecular adaptor activity
molecular_function	GO:0005515	protein binding