CmaCh01G010510 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G010510
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr01: 7788730 .. 7794923 (+)
RNA-Seq Expression	CmaCh01G010510
Synteny	CmaCh01G010510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATTTGTGAGTGTGCGCTTGTGTGTGTGTGTGGGTGGGGGGTGTTCGTTTCTGTAATAGCTTGCAGAAGTGGGTTGATGTATTCTTCTTTACTTTCTAGGTGGGTTAGGTTTTTGTAAATTCTTTTCTGATTCTGTCAGCCATACATGTTTTAAGTTCATATTTGCTTCGGTATGATGTTCAATATTGTTCTTCTTGTTATATGACAATGTTAGCCTGAGGCCAACCTTACTGCCACCGAAACTCCACCTAAAAATCTGTAACCTCTGCACGATCGGGTTGGCATTCTTTTGCAAATGGTTTCTAGTGCATTTTGGATATCAAGGGTATTGTGAGATCTTGTGATGGCAAAACGCTAAACTATATAGGAATAAAAATTCCGAACACAGAACATCAAATTATTTACATTTCATTCAATTGCAACACCATCAATCTATCATGAGAAACCTTAAACTAATATCAGGACAAACAATTTGGAGAAAGAATCACCTTCAAAGTAACAAATTCTGACAATAAATCCTCGTAGCAATCTTATATGTACACGCCAACATTAACCACCACCTTCATCAAGCTAGAAACCTTTCCAGGCATTAAGAATTTCATAGAAGATCTCAGCTATTAGATCCCTGTCTGCATTTTGTAGAAAGACATTGAATTCATCTTGGATGTCTAGTATCTTACCAAACTTCACAAGATACTGCATGCAGCATGTCTTCAGTTTTGGTAATTGATAAAGAGATGCATTTTGGAGTCTTTCAAGAACATTCTTGGCATCAATATCTTCTAGCAGACTATCATGGCAGGTTTCTTTTAGGTCATCCATGTCATATTTATCAGCTGCATGAAGAAGTGCCATTCTATGGGAGAGAAACTCTTCATGTTGGACATTACCATACATATAACTAAGAAAAGCCTGGCAAGCTTCAAAGGACATATCAGGGATGTTTACTGTGGATAGTTCCTTTTCTTTCAGGTCATGTGAAAACATGCTGTGGAAAACTGGTGATCGTGAAGCAAGAATAGCACGATGAGCTCCAACGCTTCCATCAGAAGCATTAATTATAATATCTGTGTGGATGCTTTCCTTCAACATTCGACCCAACGAAATAAGAGCTCGTTCATTTGATTGTTTTTGTGACAGTCCATTAGTCCAGATGGAGGAAGGTTCCCCACCCTGTTAGTAATTTGACAACAATGGGTTAAAAGAGGAGTGAAAAAAAAAGGCATCCAAATAGTTCTTTCCTAAACATAGGCGTTGATAAGTACTTTTTCTTAATGATCAGGCATAACTTTTGTCAACTGCTTCTGTGCGTGGCTTGTTTTTATCAATGATCCTTTAACTGTTTCATTATAGTTAACCTCACAATCATTTTTGGAAGAAATATGCAACGCAATCGCAATGGAGAGATATTTATAAGCTCACCTCAGGCGATGCAATCTTCAAGTCAATGAATTCGATGTCAATGATGAACTTTCCTGTTAATGGAACTTCAATTGGCCAAATAAAATCGTCGTTGTTCTTAAGCTGTTTGTCTATTATGTCTGCATGGATGTGGTGGGGTAACAAACATTGGTGAATAGAGGAACTGAAGGTCATAGAGAAAAGAAGAAATTCTGGAAATTAAGACTCTCTCCCCCTCCCCCTTCCACACACACACACACACAAGGGGAGGCAAAAGGATAAGAAATGAAGGCCCAAACACTTAACCAAATTTCTTAGCAGAGATTAGCCATATTCACCCATCAATCAAGTATTTCAACTTATATTCATGAACCAGCATCTGAAGATATAGTAGAAGGTGAATAGACTTTTCTATCTGAAAACTAACTACTCTGCCTTGAAAATGTTCAGAGAACGAGAATGAAATTACCTGGATGAGTCCAAGCCTTCCGACCTCCTGCAGAGGAAACCACTCGGATGGTGAAAGATACAATTGGGGGATTGTCCCTTGTTAAGCTCGATATCTCTGGGTATAATTTAACATATAAAAGCCTGTTTTTTTCCACTGATAAATGCCTTCAATCCAAACAAAAATATTAGACATCCACATATATTCCTATCCTGCTTGGATAGAAAACAAAAAGCATTAAAATCTCCAAGAAGAAGGGGGGAAAGCAGATTCTTATCACTATATCTCCTTAAGAAATGGTTAGAATCTTATCCTCACCCTTAATCACTGGAATTATAGCTTTAAACGAAAAATAAAGAACAAGGAAAGAGGTAAATTTACCAGTTCCACTTGCCAATTTTGAAGGGATCGGATTTGCGGTAGGTGCAGGAAGCTAGATTCTCGATCCTCCATTGCGCGAGACGGGATGTGGTTTCTACTCTGTATGCTGAGTCACTCATCCTAGCAAACGCTAGGGCTGCGGTGATTTCATGGATGCAACCGAAGATGCCGTCGAGGAAGTGCTCTCCGGACTTCCCCAGGTTAGCTAATTCTGCCGTTATTTCTCATCAACATAGGTGGAGCAACACCTGTGAAGACAAATTTCTCTCTCTTCTCTATATAAATATATCTTTCTTCTCTGCACTGCTCGCTGATCAAAGCATAAGAATCTTTGATCAAACAAAAGACGTTGATTTGTGTGTATTTATTGCTTTTATTATCTAATTTGACGCTTTCAGTTGTACCCAGCACGCCAAGATGTTGGTGATTCTTTACGTCATTGATGTTGAAGGTTTGATTTTCGGGAGAGGGTTTGAAAATGGTCTTGGGAGTATGCTTATGCATCATCTATTGGTCCTTCTTTTCTTTTGGGTTTTCTTTCCCACATTAATTTTGTGTTAACATTTGGCTTCAGCATTTGGCTTCGAGGCGTGGTCTTTGCTCCTTCAAAGCAAAGCATCTATTTCAATCCTTTGTTGGGATTTATTCGCAATTTCGCATGGAGGAGTCGATTGTTGGTGAATCAAGGCAGCACAAGAAATAAGAAAAACCCACTCTGCATTCATGGACCCCAGTCAGTCATGGAGGTACGCAATCTTTTTCCCCCGAAATTATATTATATTTATCTTCTTCTTGTTCTTCTGGAGGCCAATGATGGTCTCTTGGCCACCCGCATAAGACCTTTATTTTTCAATATTTAAATATTTCTTTTATTTTAACTTTACAGAGTTAAAATGGAGAGTAGGGGATTTGAACTGAATTTATAGCCCCCCTCATATTTAATATAAAATGAGAATAATAAGAATTAGGCATTCCTTTGATTTCATTTAATCAGAATTACTTAAAAAGTGAAATTATATACTATTCCTATGGCTTAGTTGTATTAAGAAAGTTAATCGAACATAATATAATAATTATCAAAATACCCCCTTTGGTTTTAACCCATTAAAAAAAGATACTAGTAAACTTCTAAAATAGAAGAGCAATTATTTACACAGGACATGATTTGATTTTTATTGTTAGTTCATTTAATAATTCTGGGTAGAGTAGAAGAGATTGAATGATACTGTTACATGATTCTCAAGAAAGTTGTGAGGTCCATAAAATAGGAGATAAAATAATTATTTTTCCAACTTTGAGGTGGACTCTACATTATAATTCAATTCCATTAATTTGACAAAAAAAAATGAATCGAGTTTACGTCAAAGACCTCATTAATTGTTTGTAATTTCGAATACGATCCTTTGGATTTATTCTATAAATATGATACTGAAGTAAATTTCAGTAAATTGTGGTTTGATGAATGATTTTGGAAGAGAGATAGATAGAGAAAAGCCACAACATGAATTGTGTATGAAGAAGAAAGGTATCAGAAGAATCCGAGTTCCCAATATTAGAAGCAACTTCCAAATCCTATAGCAAACAATCATCCTTTCCTTGTATTACAAAAGAACTAATTTAATAAAATTTTGCTGACGCAGGAACAGGTTATTGAATGGCTCATATGATGTGCTATGATCTCATCTCATCCATTGCTCATTGGCTTCTGACCACTTCTATTCTGTCAAATCAAATGGCACACTGTGTGAGCAACTTCGAAGGACGTGTTCTTTTCATTCTCTGTACGTATCTTCCTACCCTTCAACTATTTATGATCGCATGATGGAATTACTTCGAAGGACGTGTTCTTTTCATTCTCTCTACTCACTTCTTTTATTAGATGTCACTCACTCAAGTTCAAATTTCAAACATAAATATTAAACTTTGTAGAGGTATATGATATTTGCCTCTTAAATTTAAATGGTCTTTAAATTTATAGTGTGTATAGGTTTTTTAATTTAAAAAGTTTTAAATTTATAGTTTTATGTTCTATAAGATCCATAATTTTTAACTTTATGTCTTTAACTTATTTGTCTTCTTCTTTTGGGTTAGGGTCTATTAGATATTCAATTTAACTAATAGGATTGTCCCTAAACCTATAAAATTTTAGCCAAATTTTAGATTATAGAAAGAGATTGTGTAGCTATATTGTTCGAGGTTCGAACACTCATTATCTCATTATTGATGGGTTGAAATTCGAGAAAGTTGGATAAGTACCTTTGAGGAGTGGAAGTTTGTAGCCAGTTTTAAGAGTAGTTTGTGTTGTTGGTCAATTAATAGGGCAAAAAAAGTCCATTGATTTATAATTATTTATTTTTTGAGTCTCAGAGGTTTGAAGATTATAACGTTATTAGTTATACTATATTAAAGTTGAGTTGAAAATTAGTGCATTGATAGAATTAAATAGATAAATAACTCAAAATCATTCTAGCAAATATAAAAGTTTGAACCACCACTAAGAGATCTAGAAAATGGCAATGGGACCCTAAAATTACTTTGTAAATTGGTGTTATAAAAATAGAGGGATATATAAAGAAGTTAGGGAGTGGTAGATTCTGCTAATCAGTGAGGTGTGCACTACTAATTCCAAACTAACAACCAAATCACTTTTGACTAATGATATCTCAACTTGTCCAATTACTATAAAATATGTTATAACTATATTAAAAATTTTAGTGACATATGGTATGGTTGTTAACATTTGTTTTAAAATGCAATACTCAGATCTGAATCTTTAGTAGATGTACTTGCTTGGGAACTTGCTGTGTCCAACCATTTCAAAGTTTCAAGATTATTGAAATTAGTGATTTTTTGGATGTATCTATATTGCTTGTTTTTTAGTTAAAGTTTGTAGGTGAATTAGCAATATAGAGACGTTCATTCCGTTTGTAGGTGAATTAGCAAATATTGTTAGTTTTGGTCCGTTACATATCGTCGTTAGCCACAGTTTTAAAACGTATCTATTAGGTAGAAGTTTCCACATTTTTATAAGGAATATTTCGCTCCCCTCTCCAATCGATATGAGATCTCACAATCCATCATCTTGGGGGCCCAACGTCCTTGTTGGTACATCAGTTAGTGTCTAGGTTTGGTACTATTTGTAACCGCTCAAGCGCACCGCTAGTAGGGCCTTTTACGTATCGTCATTGACCTTACGAGTTTAAAATGTGTCTCCTCTCCCACTTATGTGAGATCTCACAATCCATTCCTTGGGGGCCTAGTGTCCTCACAGGCACTCGTCTGATTCTAATCCCATTTATAATAGTTCAAGCCCACCTTTAGTAAATACTCTTAATTTTGGTTCATTACTATTAGGGGAAAGTTTTTACATTTTTATAAGAAATGTTTCACTCCCGCTAACCTGAGATGGTTATGGTGGTTAACACATGGATTCCAACTTTCTGGCTTTCTGTCAAGCACCAGTGCTCCATCTTCCAAAGCTGGTCTAGTAAAATGTATCTCACTGTTTCATTCTTTGCTAAAATATTGTTTTCGAACTTGTAGCTAATTTCTTTTTGTAAAGATAGAAGTGATATCGGATCTCCTAACTTAATCTTTCGTATCTAATTCTTTTGATAGTTCAACTTTTATCTTTAGAATTGTCTATTTGTTTGTCTCATCTATTAACAGTAAAATAATATACGAGTTACCTAAAGATTTTATATAGCATTTTTCGACCCCAACAATGGGATTACTTACTAAATATTTTTTTAAAACTCAAACCACATCTAATATCTTTTCAGGTAAAGATAAGAGCCCCATATATGGATGATGATGTCAGTTGATGAGACCATAGAATCAAGTGACGGTTAGTTAGATTTCTACAATAAAGTTGTAGTCTAGATGTTAGGACGGGTCAATGATTCTAATTTTTTATTAGAGGTGTTTTTTCCCTTTTTTTTAACCCGATAATACAAAGCCAC

mRNA sequence

TACATTTGTGAGTGTGCGCTTGTGTGTGTGTGTGGGTGGGGGGTGTTCGTTTCTGTAATAGCTTGCAGAAGTGGGTTGATGTATTCTTCTTTACTTTCTAGGTGGGTTAGGTTTTTGTAAATTCTTTTCTGATTCTGTCAGCCATACATGTTTTAAGTTCATATTTGCTTCGGTATGATGTTCAATATTGTTCTTCTTGTTATATGACAATGTTAGCCTGAGGCCAACCTTACTGCCACCGAAACTCCACCTAAAAATCTGTAACCTCTGCACGATCGGGTTGGCATTCTTTTGCAAATGGTTTCTAGTGCATTTTGGATATCAAGGGTATTGTGAGATCTTGTGATGGCAAAACGCTAAACTATATAGGAATAAAAATTCCGAACACAGAACATCAAATTATTTACATTTCATTCAATTGCAACACCATCAATCTATCATGAGAAACCTTAAACTAATATCAGGACAAACAATTTGGAGAAAGAATCACCTTCAAAGTAACAAATTCTGACAATAAATCCTCGTAGCAATCTTATATGTACACGCCAACATTAACCACCACCTTCATCAAGCTAGAAACCTTTCCAGGCATTAAGAATTTCATAGAAGATCTCAGCTATTAGATCCCTGTCTGCATTTTGTAGAAAGACATTGAATTCATCTTGGATGTCTAGTATCTTACCAAACTTCACAAGATACTGCATGCAGCATGTCTTCAGTTTTGGTAATTGATAAAGAGATGCATTTTGGAGTCTTTCAAGAACATTCTTGGCATCAATATCTTCTAGCAGACTATCATGGCAGGTTTCTTTTAGGTCATCCATGTCATATTTATCAGCTGCATGAAGAAGTGCCATTCTATGGGAGAGAAACTCTTCATGTTGGACATTACCATACATATAACTAAGAAAAGCCTGGCAAGCTTCAAAGGACATATCAGGGATGTTTACTGTGGATAGTTCCTTTTCTTTCAGGTCATGTGAAAACATGCTGTGGAAAACTGGTGATCGTGAAGCAAGAATAGCACGATGAGCTCCAACGCTTCCATCAGAAGCATTAATTATAATATCTGTGTGGATGCTTTCCTTCAACATTCGACCCAACGAAATAAGAGCTCGTTCATTTGATTGTTTTTGTGACAGTCCATTAGTCCAGATGGAGGAAGGTTCCCCACCCTGTTAGTAATTTGACAACAATGGGTTAAAAGAGGAGTGAAAAAAAAAGGCATCCAAATAGTTCTTTCCTAAACATAGGCGTTGATAAGTACTTTTTCTTAATGATCAGGCATAACTTTTGTCAACTGCTTCTGTGCGTGGCTTGTTTTTATCAATGATCCTTTAACTGTTTCATTATAGTTAACCTCACAATCATTTTTGGAAGAAATATGCAACGCAATCGCAATGGAGAGATATTTATAAGCTCACCTCAGGCGATGCAATCTTCAAGTCAATGAATTCGATGTCAATGATGAACTTTCCTGTTAATGGAACTTCAATTGGCCAAATAAAATCGTCGTTGTTCTTAAGCTGTTTGTCTATTATGTCTGCATGGATGTGGTGGGGTAACAAACATTGGTGAATAGAGGAACTGAAGGTCATAGAGAAAAGAAGAAATTCTGGAAATTAAGACTCTCTCCCCCTCCCCCTTCCACACACACACACACACAAGGGGAGGCAAAAGGATAAGAAATGAAGGCCCAAACACTTAACCAAATTTCTTAGCAGAGATTAGCCATATTCACCCATCAATCAAGTATTTCAACTTATATTCATGAACCAGCATCTGAAGATATAGTAGAAGGTGAATAGACTTTTCTATCTGAAAACTAACTACTCTGCCTTGAAAATGTTCAGAGAACGAGAATGAAATTACCTGGATGAGTCCAAGCCTTCCGACCTCCTGCAGAGGAAACCACTCGGATGGTGAAAGATACAATTGGGGGATTGTCCCTTGTTAAGCTCGATATCTCTGGGTATAATTTAACATATAAAAGCCTGTTTTTTTCCACTGATAAATGCCTTCAATCCAAACAAAAATATTAGACATCCACATATATTCCTATCCTGCTTGGATAGAAAACAAAAAGCATTAAAATCTCCAAGAAGAAGGGGGGAAAGCAGATTCTTATCACTATATCTCCTTAAGAAATGGGATCGGATTTGCGGTAGGTGCAGGAAGCTAGATTCTCGATCCTCCATTGCGCGAGACGGGATGTGGTTTCTACTCTGTATGCTGAGTCACTCATCCTAGCAAACGCTAGGGCTGCGGTGATTTCATGGATGCAACCGAAGATGCCGTCGAGGAAGTGCTCTCCGGACTTCCCCAGCATTTGGCTTCGAGGCGTGGTCTTTGCTCCTTCAAAGCAAAGCATCTATTTCAATCCTTTGTTGGGATTTATTCGCAATTTCGCATGGAGGAGTCGATTGTTGGTGAATCAAGGCAGCACAAGAAATAAGAAAAACCCACTCTGCATTCATGGACCCCAGTCAGTCATGGAGGAACAGGTTATTGAATGGCTCATATGATGTGCTATGATCTCATCTCATCCATTGCTCATTGGCTTCTGACCACTTCTATTCTGTCAAATCAAATGGCACACTGTGTGAGCAACTTCGAAGGACGTGTTCTTTTCATTCTCTGTAAAGATAAGAGCCCCATATATGGATGATGATGTCAGTTGATGAGACCATAGAATCAAGTGACGGTTAGTTAGATTTCTACAATAAAGTTGTAGTCTAGATGTTAGGACGGGTCAATGATTCTAATTTTTTATTAGAGGTGTTTTTTCCCTTTTTTTTAACCCGATAATACAAAGCCAC

Coding sequence (CDS)

ATGCAACCGAAGATGCCGTCGAGGAAGTGCTCTCCGGACTTCCCCAGCATTTGGCTTCGAGGCGTGGTCTTTGCTCCTTCAAAGCAAAGCATCTATTTCAATCCTTTGTTGGGATTTATTCGCAATTTCGCATGGAGGAGTCGATTGTTGGTGAATCAAGGCAGCACAAGAAATAAGAAAAACCCACTCTGCATTCATGGACCCCAGTCAGTCATGGAGGAACAGGTTATTGAATGGCTCATATGA

Protein sequence

MQPKMPSRKCSPDFPSIWLRGVVFAPSKQSIYFNPLLGFIRNFAWRSRLLVNQGSTRNKKNPLCIHGPQSVMEEQVIEWLI

Homology

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BLAST of CmaCh01G010510 vs. NCBI nr
Match: KAG7037301.1 (hypothetical protein SDJN02_00926, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35
Identity = 80/105 (76.19%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   MQPKMPSRKCSPDFPS------------------------IWLRGVVFAPSKQSIYFNPL 60
           MQPKMPSRKCSPDFPS                        IWLRGVVFAPSKQSIYFNPL
Sbjct: 41  MQPKMPSRKCSPDFPSCTQHAKMLVVLYDIDVEGLIFGRGIWLRGVVFAPSKQSIYFNPL 100

Query: 61  LGFIRNFAWRSRLLVNQGSTRNKKNPLCIHGPQSVMEEQVIEWLI 82
           LGFIRNFAWRSRLLVNQGSTRNKKNPLCIHGPQSVMEEQVIEW I
Sbjct: 101 LGFIRNFAWRSRLLVNQGSTRNKKNPLCIHGPQSVMEEQVIEWPI 145

The following BLAST results are available for this feature:

BLAST of CmaCh01G010510 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G010510 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G010510 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037301.1	1.6e-35	76.19	hypothetical protein SDJN02_00926, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh01G010510 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G010510.1	CmaCh01G010510.1	mRNA