Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCTTCCCCTAAAATTCCAACCTCAACGCTCCGTCTTCCATGGAAGCACCGTCTAATGCTTCGTCTCGGTACTATAGCCACCAACACCTTTTGCCGATCCGATTTCACCATCAACCGTTGGCTCACCGGAATCCTTGACCGGAGAACCCCCCCCTCTTCCAAACCAATAGACGGCGTCTCCTCTTCCGATCTCCTCATCGACAAATCCCGCAACCTCTGGGTTCGAATCTTCACCCCCATCGACGATGTTCAATCCCTGCCGGTGATTTTCTATTACCATGGCGGCGGCTTCGCTTTCTCTTACGCTGATTCATCTCTTTACCACACCACCGCTCACCAATTTGCCAAACAACTACGCGCCGTCGTGATCTCCGTTAACTACCGCCTCGCTCCGGAGTTCCGATTCCCGTGCCAATACGACGACGGATTCGACGCATTGAAATTCATAGACGAAATCGATGATGGGACATTACCGGCGAGCGCAGATTTGGGGCGTAGCTTCATTTTGGGGGAAAGCGCCGGGGGGAATCTGGGGCACCACGTGGCAGTGAGAGCGAGCGAGTACGCTTTCAAGAAACTGAAATTAATTGGGTTTATAGCGACGCAGCCGTTTATCGGGGCAGAGGAAAGAACAGAGTCGGAGATTCGGCTATGCAATCAGCCGCCGTTGAGTCTGAAACTTACGGATTGGTTTTGGAAGGCGTTTTTGCCAGTTGGGTCAGACCGAGACCACGCGGCGGCGAATGTTTTCGGGCCGAACGGAAGGGATATTTCGGGAGTGGAGAAGTTTCCGGCGACGGTGGTGTTAGTGGGAGGGTTTGATTTGCTGCAGGATGGGCAGAGGAGGTATTATGAGGGGCTGAAGAGAATGGGAAAGGAAGTGAAGATGGTGGAGCTTCCAAACGCCATTCATGGCTTCTTTTGCTTCCCCGATCTGCCGGAATATTCCTCCATGATTCAGGCGGTGAGGGATTTCATCGCCGCCCAATGGCAAAACTGTAAAAAGAAAGGACTCGTAGTTTAA
mRNA sequence
ATGTCGTCTTCCCCTAAAATTCCAACCTCAACGCTCCGTCTTCCATGGAAGCACCGTCTAATGCTTCGTCTCGGTACTATAGCCACCAACACCTTTTGCCGATCCGATTTCACCATCAACCGTTGGCTCACCGGAATCCTTGACCGGAGAACCCCCCCCTCTTCCAAACCAATAGACGGCGTCTCCTCTTCCGATCTCCTCATCGACAAATCCCGCAACCTCTGGGTTCGAATCTTCACCCCCATCGACGATGTTCAATCCCTGCCGGTGATTTTCTATTACCATGGCGGCGGCTTCGCTTTCTCTTACGCTGATTCATCTCTTTACCACACCACCGCTCACCAATTTGCCAAACAACTACGCGCCGTCGTGATCTCCGTTAACTACCGCCTCGCTCCGGAGTTCCGATTCCCGTGCCAATACGACGACGGATTCGACGCATTGAAATTCATAGACGAAATCGATGATGGGACATTACCGGCGAGCGCAGATTTGGGGCGTAGCTTCATTTTGGGGGAAAGCGCCGGGGGGAATCTGGGGCACCACGTGGCAGTGAGAGCGAGCGAGTACGCTTTCAAGAAACTGAAATTAATTGGGTTTATAGCGACGCAGCCGTTTATCGGGGCAGAGGAAAGAACAGAGTCGGAGATTCGGCTATGCAATCAGCCGCCGTTGAGTCTGAAACTTACGGATTGGTTTTGGAAGGCGTTTTTGCCAGTTGGGTCAGACCGAGACCACGCGGCGGCGAATGTTTTCGGGCCGAACGGAAGGGATATTTCGGGAGTGGAGAAGTTTCCGGCGACGGTGGTGTTAGTGGGAGGGTTTGATTTGCTGCAGGATGGGCAGAGGAGGTATTATGAGGGGCTGAAGAGAATGGGAAAGGAAGTGAAGATGGTGGAGCTTCCAAACGCCATTCATGGCTTCTTTTGCTTCCCCGATCTGCCGGAATATTCCTCCATGATTCAGGCGGTGAGGGATTTCATCGCCGCCCAATGGCAAAACTGTAAAAAGAAAGGACTCGTAGTTTAA
Coding sequence (CDS)
ATGTCGTCTTCCCCTAAAATTCCAACCTCAACGCTCCGTCTTCCATGGAAGCACCGTCTAATGCTTCGTCTCGGTACTATAGCCACCAACACCTTTTGCCGATCCGATTTCACCATCAACCGTTGGCTCACCGGAATCCTTGACCGGAGAACCCCCCCCTCTTCCAAACCAATAGACGGCGTCTCCTCTTCCGATCTCCTCATCGACAAATCCCGCAACCTCTGGGTTCGAATCTTCACCCCCATCGACGATGTTCAATCCCTGCCGGTGATTTTCTATTACCATGGCGGCGGCTTCGCTTTCTCTTACGCTGATTCATCTCTTTACCACACCACCGCTCACCAATTTGCCAAACAACTACGCGCCGTCGTGATCTCCGTTAACTACCGCCTCGCTCCGGAGTTCCGATTCCCGTGCCAATACGACGACGGATTCGACGCATTGAAATTCATAGACGAAATCGATGATGGGACATTACCGGCGAGCGCAGATTTGGGGCGTAGCTTCATTTTGGGGGAAAGCGCCGGGGGGAATCTGGGGCACCACGTGGCAGTGAGAGCGAGCGAGTACGCTTTCAAGAAACTGAAATTAATTGGGTTTATAGCGACGCAGCCGTTTATCGGGGCAGAGGAAAGAACAGAGTCGGAGATTCGGCTATGCAATCAGCCGCCGTTGAGTCTGAAACTTACGGATTGGTTTTGGAAGGCGTTTTTGCCAGTTGGGTCAGACCGAGACCACGCGGCGGCGAATGTTTTCGGGCCGAACGGAAGGGATATTTCGGGAGTGGAGAAGTTTCCGGCGACGGTGGTGTTAGTGGGAGGGTTTGATTTGCTGCAGGATGGGCAGAGGAGGTATTATGAGGGGCTGAAGAGAATGGGAAAGGAAGTGAAGATGGTGGAGCTTCCAAACGCCATTCATGGCTTCTTTTGCTTCCCCGATCTGCCGGAATATTCCTCCATGATTCAGGCGGTGAGGGATTTCATCGCCGCCCAATGGCAAAACTGTAAAAAGAAAGGACTCGTAGTTTAA
Protein sequence
MSSSPKIPTSTLRLPWKHRLMLRLGTIATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIFTPIDDVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISVNYRLAPEFRFPCQYDDGFDALKFIDEIDDGTLPASADLGRSFILGESAGGNLGHHVAVRASEYAFKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDRDHAAANVFGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNAIHGFFCFPDLPEYSSMIQAVRDFIAAQWQNCKKKGLVV
Homology
BLAST of CmaCh01G008790 vs. ExPASy Swiss-Prot
Match:
Q9LT10 (Probable carboxylesterase 18 OS=Arabidopsis thaliana OX=3702 GN=CXE18 PE=1 SV=1)
HSP 1 Score: 320.5 bits (820), Expect = 2.4e-86
Identity = 159/324 (49.07%), Postives = 214/324 (66.05%), Query Frame = 0
Query: 8 PTSTLRLPWKHRLMLRLGTIATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLL 67
P L LP K R+ L + + T+ R D TINR + D R PP+ KP++ VS+SD +
Sbjct: 7 PNQKLTLPLKTRIALTVISTMTDNAQRPDGTINRRFLRLFDFRAPPNPKPVNIVSTSDFV 66
Query: 68 IDKSRNLWVRIFTPIDDVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISV 127
+D+SR+LW R++TP +PV+ ++HGGGFAF ++ Y +FA++L A VISV
Sbjct: 67 VDQSRDLWFRLYTPHVSGDKIPVVVFFHGGGFAFLSPNAYPYDNVCRRFARKLPAYVISV 126
Query: 128 NYRLAPEFRFPCQYDDGFDALKFIDEIDDGTLPASADLGRSFILGESAGGNLGHHVAV-- 187
NYRLAPE R+P QYDDGFDALK+I+E LPA+ADL R F G+SAGGN+ H+VA+
Sbjct: 127 NYRLAPEHRYPAQYDDGFDALKYIEENHGSILPANADLSRCFFAGDSAGGNIAHNVAIRI 186
Query: 188 -RASEYAFKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDR 247
R +F +KLIG I+ QPF G EERTE+E +L P +S TDW WKA +G +R
Sbjct: 187 CREPRSSFTAVKLIGLISIQPFFGGEERTEAEKQLVGAPLVSPDRTDWCWKA---MGLNR 246
Query: 248 DHAAANVFGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNA 307
DH A NV GPN DISG++ +P T+V+V GFD L+D QR YYE LK GK+ ++E PN
Sbjct: 247 DHEAVNVGGPNAVDISGLD-YPETMVVVAGFDPLKDWQRSYYEWLKLCGKKATLIEYPNM 306
Query: 308 IHGFFCFPDLPEYSSMIQAVRDFI 329
H F+ FP+LPE +I ++DF+
Sbjct: 307 FHAFYIFPELPEAGQLIMRIKDFV 326
BLAST of CmaCh01G008790 vs. ExPASy Swiss-Prot
Match:
Q940G6 (Gibberellin receptor GID1C OS=Arabidopsis thaliana OX=3702 GN=GID1C PE=1 SV=1)
HSP 1 Score: 247.7 bits (631), Expect = 1.9e-64
Identity = 129/322 (40.06%), Postives = 194/322 (60.25%), Query Frame = 0
Query: 27 IATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIFTPID--- 86
+A N R D T NR L LDR+ P ++ P++GV S D++ID+ NL R++ P D
Sbjct: 29 LAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGT 88
Query: 87 -----------DVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISVNYRLA 146
D + +PVI ++HGG FA S A+S++Y T + AVV+SVNYR A
Sbjct: 89 SPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRA 148
Query: 147 PEFRFPCQYDDGFDALKFIDEIDDGTLPASADLG-RSFILGESAGGNLGHHVAVRASEYA 206
PE R+PC YDDG+ LK+++ L + D R F+ G+S+GGN+ H+VAVRA E
Sbjct: 149 PENRYPCAYDDGWAVLKWVN--SSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE-- 208
Query: 207 FKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDRDHAAANV 266
++ ++G I P G ERTESE RL + ++++ DW+W+AFLP G DR+H A +
Sbjct: 209 -SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSP 268
Query: 267 FGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNAIHGFFCF 326
FGP + + G+ FP ++V+V G DL+QD Q +Y EGLK+ G+EVK++ L A GF+
Sbjct: 269 FGPRSKSLEGL-SFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYLL 328
Query: 327 PDLPEYSSMIQAVRDFIAAQWQ 334
P+ + +++ + F+ A+ Q
Sbjct: 329 PNNNHFHTVMDEIAAFVNAECQ 344
BLAST of CmaCh01G008790 vs. ExPASy Swiss-Prot
Match:
Q6L545 (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica OX=39947 GN=GID1 PE=1 SV=1)
HSP 1 Score: 237.3 bits (604), Expect = 2.6e-61
Identity = 128/328 (39.02%), Postives = 188/328 (57.32%), Query Frame = 0
Query: 27 IATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIF------- 86
++ N R+D T R L LDRR P +++P++GVSS D +ID+S L VRI+
Sbjct: 29 LSYNILRRADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGD 88
Query: 87 ----------------TPIDDVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAV 146
T + PVI ++HGG F S A S++Y + +F K + V
Sbjct: 89 AEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGV 148
Query: 147 VISVNYRLAPEFRFPCQYDDGFDALKFIDEIDDGTLPASADL-GRSFILGESAGGNLGHH 206
V+SVNYR APE R+PC YDDG+ ALK++ + + + D R F+ G+S+GGN+ HH
Sbjct: 149 VVSVNYRRAPEHRYPCAYDDGWTALKWV--MSQPFMRSGGDAQARVFLSGDSSGGNIAHH 208
Query: 207 VAVRASEYAFKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGS 266
VAVRA++ + +K+ G I G ERTESE RL + ++L+ DW+WKA+LP +
Sbjct: 209 VAVRAAD---EGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDA 268
Query: 267 DRDHAAANVFGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELP 326
DRDH A N FGPNGR + G+ F ++++V G DL D Q Y + L+ G VK+V+
Sbjct: 269 DRDHPACNPFGPNGRRLGGL-PFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCE 328
Query: 327 NAIHGFFCFPDLPEYSSMIQAVRDFIAA 331
NA GF+ P+ Y +++ + DF+ A
Sbjct: 329 NATVGFYLLPNTVHYHEVMEEISDFLNA 350
BLAST of CmaCh01G008790 vs. ExPASy Swiss-Prot
Match:
Q9MAA7 (Gibberellin receptor GID1A OS=Arabidopsis thaliana OX=3702 GN=GID1A PE=1 SV=1)
HSP 1 Score: 234.6 bits (597), Expect = 1.7e-60
Identity = 126/322 (39.13%), Postives = 187/322 (58.07%), Query Frame = 0
Query: 27 IATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIFTP----- 86
+A N R D T NR L LDR+ ++ P+DGV S D+LID+ NL R++ P
Sbjct: 29 VAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQ 88
Query: 87 ------ID-----DVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISVNYR 146
+D D +PVI ++HGG FA S A+S++Y T + + VV+SVNYR
Sbjct: 89 EQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYR 148
Query: 147 LAPEFRFPCQYDDGFDALKFIDEIDDGTLPASADLG-RSFILGESAGGNLGHHVAVRASE 206
APE +PC YDDG+ AL +++ L + D F+ G+S+GGN+ H+VA+RA E
Sbjct: 149 RAPENPYPCAYDDGWIALNWVN--SRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE 208
Query: 207 YAFKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDRDHAAA 266
+ ++G I P G ERTESE L + ++++ DW+WKAFLP G DR+H A
Sbjct: 209 ---SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPAC 268
Query: 267 NVFGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNAIHGFF 326
N F P G+ + GV FP ++V+V G DL++D Q Y EGLK+ G+EVK++ L A GF+
Sbjct: 269 NPFSPRGKSLEGV-SFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFY 328
Query: 327 CFPDLPEYSSMIQAVRDFIAAQ 332
P+ + +++ + F+ A+
Sbjct: 329 LLPNNNHFHNVMDEISAFVNAE 344
BLAST of CmaCh01G008790 vs. ExPASy Swiss-Prot
Match:
Q9LYC1 (Gibberellin receptor GID1B OS=Arabidopsis thaliana OX=3702 GN=GID1B PE=1 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 4.3e-56
Identity = 117/320 (36.56%), Postives = 183/320 (57.19%), Query Frame = 0
Query: 27 IATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIF------- 86
+A R D + NR L LDR+ P +S P+DGV S D +D + NL RI+
Sbjct: 29 LAYKVLRRPDGSFNRDLAEFLDRKVPANSFPLDGVFSFD-HVDSTTNLLTRIYQPASLLH 88
Query: 87 ----------TPIDDVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISVNY 146
P+ + +PV+ ++HGG F S A+S++Y T + VV+SV+Y
Sbjct: 89 QTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDY 148
Query: 147 RLAPEFRFPCQYDDGFDALKFIDEIDDGTLPASADLG-RSFILGESAGGNLGHHVAVRAS 206
R +PE R+PC YDDG++AL ++ L + D ++ G+S+GGN+ H+VAVRA+
Sbjct: 149 RRSPEHRYPCAYDDGWNALNWVK--SRVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRAT 208
Query: 207 EYAFKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDRDHAA 266
+ +K++G I P G +ERT+SE L + ++++ DW+W+A+LP G DRDH A
Sbjct: 209 N---EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPA 268
Query: 267 ANVFGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNAIHGF 326
N FGP G+ + GV FP ++V+V G DL+QD Q Y +GLK+ G EV ++ L A GF
Sbjct: 269 CNPFGPRGQSLKGV-NFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGF 328
Query: 327 FCFPDLPEYSSMIQAVRDFI 329
+ P+ + +++ + F+
Sbjct: 329 YFLPNNDHFHCLMEELNKFV 341
BLAST of CmaCh01G008790 vs. TAIR 10
Match:
AT5G23530.1 (carboxyesterase 18 )
HSP 1 Score: 320.5 bits (820), Expect = 1.7e-87
Identity = 159/324 (49.07%), Postives = 214/324 (66.05%), Query Frame = 0
Query: 8 PTSTLRLPWKHRLMLRLGTIATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLL 67
P L LP K R+ L + + T+ R D TINR + D R PP+ KP++ VS+SD +
Sbjct: 7 PNQKLTLPLKTRIALTVISTMTDNAQRPDGTINRRFLRLFDFRAPPNPKPVNIVSTSDFV 66
Query: 68 IDKSRNLWVRIFTPIDDVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISV 127
+D+SR+LW R++TP +PV+ ++HGGGFAF ++ Y +FA++L A VISV
Sbjct: 67 VDQSRDLWFRLYTPHVSGDKIPVVVFFHGGGFAFLSPNAYPYDNVCRRFARKLPAYVISV 126
Query: 128 NYRLAPEFRFPCQYDDGFDALKFIDEIDDGTLPASADLGRSFILGESAGGNLGHHVAV-- 187
NYRLAPE R+P QYDDGFDALK+I+E LPA+ADL R F G+SAGGN+ H+VA+
Sbjct: 127 NYRLAPEHRYPAQYDDGFDALKYIEENHGSILPANADLSRCFFAGDSAGGNIAHNVAIRI 186
Query: 188 -RASEYAFKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDR 247
R +F +KLIG I+ QPF G EERTE+E +L P +S TDW WKA +G +R
Sbjct: 187 CREPRSSFTAVKLIGLISIQPFFGGEERTEAEKQLVGAPLVSPDRTDWCWKA---MGLNR 246
Query: 248 DHAAANVFGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNA 307
DH A NV GPN DISG++ +P T+V+V GFD L+D QR YYE LK GK+ ++E PN
Sbjct: 247 DHEAVNVGGPNAVDISGLD-YPETMVVVAGFDPLKDWQRSYYEWLKLCGKKATLIEYPNM 306
Query: 308 IHGFFCFPDLPEYSSMIQAVRDFI 329
H F+ FP+LPE +I ++DF+
Sbjct: 307 FHAFYIFPELPEAGQLIMRIKDFV 326
BLAST of CmaCh01G008790 vs. TAIR 10
Match:
AT5G27320.1 (alpha/beta-Hydrolases superfamily protein )
HSP 1 Score: 247.7 bits (631), Expect = 1.4e-65
Identity = 129/322 (40.06%), Postives = 194/322 (60.25%), Query Frame = 0
Query: 27 IATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIFTPID--- 86
+A N R D T NR L LDR+ P ++ P++GV S D++ID+ NL R++ P D
Sbjct: 29 LAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGT 88
Query: 87 -----------DVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISVNYRLA 146
D + +PVI ++HGG FA S A+S++Y T + AVV+SVNYR A
Sbjct: 89 SPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRA 148
Query: 147 PEFRFPCQYDDGFDALKFIDEIDDGTLPASADLG-RSFILGESAGGNLGHHVAVRASEYA 206
PE R+PC YDDG+ LK+++ L + D R F+ G+S+GGN+ H+VAVRA E
Sbjct: 149 PENRYPCAYDDGWAVLKWVN--SSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE-- 208
Query: 207 FKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDRDHAAANV 266
++ ++G I P G ERTESE RL + ++++ DW+W+AFLP G DR+H A +
Sbjct: 209 -SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSP 268
Query: 267 FGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNAIHGFFCF 326
FGP + + G+ FP ++V+V G DL+QD Q +Y EGLK+ G+EVK++ L A GF+
Sbjct: 269 FGPRSKSLEGL-SFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYLL 328
Query: 327 PDLPEYSSMIQAVRDFIAAQWQ 334
P+ + +++ + F+ A+ Q
Sbjct: 329 PNNNHFHTVMDEIAAFVNAECQ 344
BLAST of CmaCh01G008790 vs. TAIR 10
Match:
AT3G05120.1 (alpha/beta-Hydrolases superfamily protein )
HSP 1 Score: 234.6 bits (597), Expect = 1.2e-61
Identity = 126/322 (39.13%), Postives = 187/322 (58.07%), Query Frame = 0
Query: 27 IATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIFTP----- 86
+A N R D T NR L LDR+ ++ P+DGV S D+LID+ NL R++ P
Sbjct: 29 VAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQ 88
Query: 87 ------ID-----DVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISVNYR 146
+D D +PVI ++HGG FA S A+S++Y T + + VV+SVNYR
Sbjct: 89 EQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYR 148
Query: 147 LAPEFRFPCQYDDGFDALKFIDEIDDGTLPASADLG-RSFILGESAGGNLGHHVAVRASE 206
APE +PC YDDG+ AL +++ L + D F+ G+S+GGN+ H+VA+RA E
Sbjct: 149 RAPENPYPCAYDDGWIALNWVN--SRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE 208
Query: 207 YAFKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDRDHAAA 266
+ ++G I P G ERTESE L + ++++ DW+WKAFLP G DR+H A
Sbjct: 209 ---SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPAC 268
Query: 267 NVFGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNAIHGFF 326
N F P G+ + GV FP ++V+V G DL++D Q Y EGLK+ G+EVK++ L A GF+
Sbjct: 269 NPFSPRGKSLEGV-SFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFY 328
Query: 327 CFPDLPEYSSMIQAVRDFIAAQ 332
P+ + +++ + F+ A+
Sbjct: 329 LLPNNNHFHNVMDEISAFVNAE 344
BLAST of CmaCh01G008790 vs. TAIR 10
Match:
AT3G63010.1 (alpha/beta-Hydrolases superfamily protein )
HSP 1 Score: 219.9 bits (559), Expect = 3.1e-57
Identity = 117/320 (36.56%), Postives = 183/320 (57.19%), Query Frame = 0
Query: 27 IATNTFCRSDFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIF------- 86
+A R D + NR L LDR+ P +S P+DGV S D +D + NL RI+
Sbjct: 29 LAYKVLRRPDGSFNRDLAEFLDRKVPANSFPLDGVFSFD-HVDSTTNLLTRIYQPASLLH 88
Query: 87 ----------TPIDDVQSLPVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISVNY 146
P+ + +PV+ ++HGG F S A+S++Y T + VV+SV+Y
Sbjct: 89 QTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDY 148
Query: 147 RLAPEFRFPCQYDDGFDALKFIDEIDDGTLPASADLG-RSFILGESAGGNLGHHVAVRAS 206
R +PE R+PC YDDG++AL ++ L + D ++ G+S+GGN+ H+VAVRA+
Sbjct: 149 RRSPEHRYPCAYDDGWNALNWVK--SRVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRAT 208
Query: 207 EYAFKKLKLIGFIATQPFIGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDRDHAA 266
+ +K++G I P G +ERT+SE L + ++++ DW+W+A+LP G DRDH A
Sbjct: 209 N---EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPA 268
Query: 267 ANVFGPNGRDISGVEKFPATVVLVGGFDLLQDGQRRYYEGLKRMGKEVKMVELPNAIHGF 326
N FGP G+ + GV FP ++V+V G DL+QD Q Y +GLK+ G EV ++ L A GF
Sbjct: 269 CNPFGPRGQSLKGV-NFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGF 328
Query: 327 FCFPDLPEYSSMIQAVRDFI 329
+ P+ + +++ + F+
Sbjct: 329 YFLPNNDHFHCLMEELNKFV 341
BLAST of CmaCh01G008790 vs. TAIR 10
Match:
AT5G62180.1 (carboxyesterase 20 )
HSP 1 Score: 181.4 bits (459), Expect = 1.2e-45
Identity = 102/283 (36.04%), Postives = 149/283 (52.65%), Query Frame = 0
Query: 36 DFTINRWLTGILDRRTPPSSKPIDGVSSSDLLIDKSRNLWVRIFTPIDDV-------QSL 95
D +I R L+ P P++ S DL +++ ++ W+R++ P V Q L
Sbjct: 21 DGSITRDLSNFPCTAATPDPSPLNPAVSKDLPVNQLKSTWLRLYLPSSAVNEGNVSSQKL 80
Query: 96 PVIFYYHGGGFAFSYADSSLYHTTAHQFAKQLRAVVISVNYRLAPEFRFPCQYDDGFDAL 155
P++ YYHGGGF D L+H + A+ L A+V+S +YRLAPE R P YDDG +AL
Sbjct: 81 PIVVYYHGGGFILCSVDMQLFHDFCSEVARDLNAIVVSPSYRLAPEHRLPAAYDDGVEAL 140
Query: 156 KFIDEIDDGTLPASADLGRSFILGESAGGNLGHHVAVRA--SEYAFKKLKLIGFIATQPF 215
+I DD + + AD F++G SAGGNL ++V +R+ S L++ G I PF
Sbjct: 141 DWIKTSDDEWIKSHADFSNVFLMGTSAGGNLAYNVGLRSVDSVSDLSPLQIRGLILHHPF 200
Query: 216 IGAEERTESEIRLCNQPPLSLKLTDWFWKAFLPVGSDRDHAAAN-VFGPNGRDISGVEKF 275
G EER+ESEIRL N +TD W LPVG DRDH +N G + + +
Sbjct: 201 FGGEERSESEIRLMNDQVCPPIVTDVMWDLSLPVGVDRDHEYSNPTVGDGSEKLEKIGRL 260
Query: 276 PATVVLVGG-FDLLQDGQRRYYEGLKRMGKEVKMVELPNAIHG 308
V+++GG D + D Q+ + +K+ G EV +HG
Sbjct: 261 RWKVMMIGGEDDPMIDLQKDVAKLMKKKGVEVVEHYTGGHVHG 303
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LT10 | 2.4e-86 | 49.07 | Probable carboxylesterase 18 OS=Arabidopsis thaliana OX=3702 GN=CXE18 PE=1 SV=1 | [more] |
Q940G6 | 1.9e-64 | 40.06 | Gibberellin receptor GID1C OS=Arabidopsis thaliana OX=3702 GN=GID1C PE=1 SV=1 | [more] |
Q6L545 | 2.6e-61 | 39.02 | Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica OX=39947 GN=GID1 PE=1 ... | [more] |
Q9MAA7 | 1.7e-60 | 39.13 | Gibberellin receptor GID1A OS=Arabidopsis thaliana OX=3702 GN=GID1A PE=1 SV=1 | [more] |
Q9LYC1 | 4.3e-56 | 36.56 | Gibberellin receptor GID1B OS=Arabidopsis thaliana OX=3702 GN=GID1B PE=1 SV=1 | [more] |