CmaCh01G007310 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh01G007310
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr01: 3846217 .. 3846744 (-)
RNA-Seq ExpressionCmaCh01G007310
SyntenyCmaCh01G007310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTTGGTGTCAAGTTTATTATTGTTTATAGCTCGACTTCTAGAGGCCATTTGGTGCGCTGGTTTGGAATCAGAAACACATAGGGTGGGTTGATTTGTTGGAATCCTTGAGTTTGATTAGTCTGTTCTTTGTTTTGATTTTTTTAGACTGGTTTTTCTTATCTCCATTTTTTGTGACTTGCTAATTGTTTTTGAATTGCGTAACATTATTTTGACCTATGAATCAATTGTCCCAACCTTATTCAAATCAGAATTATACTATGAATTAGTAGTTGTTCAAACATATTATTAGATTCATCATACAAAAAATTTCTATAACATATATGAAGAGAAAGGGAAGGAGTGTGTGCTTTACTTGATCTTGTAGGGAACAGTGGCGCCGCATTTCTCCGAGATCGTAGTTGATTCCAGGCATTGCGGAAATGCCATTCTTAATGCAGTTCTCCGGTCAGCGGTGGTGGTGGAACCGATCGAAATCAGGCTCTTTATGGCAGAGCCGCATTCCGGCGCCACCTCCCCTCCCTAA

mRNA sequence

ATGAGCTTGGTGTCAAGTTTATTATTGTTTATAGCTCGACTTCTAGAGGCCATTTGGTGCGCTGGTTTGGAATCAGAAACACATAGGGGAACAGTGGCGCCGCATTTCTCCGAGATCGTAGTTGATTCCAGGCATTGCGGAAATGCCATTCTTAATGCAGTTCTCCGGTCAGCGGTGGTGGTGGAACCGATCGAAATCAGGCTCTTTATGGCAGAGCCGCATTCCGGCGCCACCTCCCCTCCCTAA

Coding sequence (CDS)

ATGAGCTTGGTGTCAAGTTTATTATTGTTTATAGCTCGACTTCTAGAGGCCATTTGGTGCGCTGGTTTGGAATCAGAAACACATAGGGGAACAGTGGCGCCGCATTTCTCCGAGATCGTAGTTGATTCCAGGCATTGCGGAAATGCCATTCTTAATGCAGTTCTCCGGTCAGCGGTGGTGGTGGAACCGATCGAAATCAGGCTCTTTATGGCAGAGCCGCATTCCGGCGCCACCTCCCCTCCCTAA

Protein sequence

MSLVSSLLLFIARLLEAIWCAGLESETHRGTVAPHFSEIVVDSRHCGNAILNAVLRSAVVVEPIEIRLFMAEPHSGATSPP
Homology
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BLAST of CmaCh01G007310 vs. NCBI nr
Match: KAG7037041.1 (hypothetical protein SDJN02_00662, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 103.6 bits (257), Expect = 8.2e-19
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 29 RGTVAPHFSEIVVDSRHCGNAILNAVLRSAVVVEPIEIRLFMAEPHSGATSPP 82
          RGTVAPHFSEIVVDSRHCGNAI NAVLRSAVVVEPIEIRLFMAE HSGATSPP
Sbjct: 18 RGTVAPHFSEIVVDSRHCGNAIRNAVLRSAVVVEPIEIRLFMAEQHSGATSPP 70

The following BLAST results are available for this feature:
BLAST of CmaCh01G007310 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh01G007310 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh01G007310 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7037041.18.2e-1996.23hypothetical protein SDJN02_00662, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh01G007310 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G007310.1CmaCh01G007310.1mRNA