CmaCh00G003410 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCTTCCACATGGCTTCAACTGCTGCAACTCCATTACCATCTCCATCTCCAAATCCTCTTCAATGTCCTCTTCCACCGCTTCTTCCTCCAATTACTCCTTCGCCAAGCTTGGTTTCGGCTACGCCATTGCCATAGCACTCNTCCGCCCTCCTCCTCGCCTTCTACGTCTGCTGCCGCGCCTCCCGCTCCCGCAACCTCCGTCTCTCTTCTTCCAGGCCGCCTCCCTCGCGCTCCGATGCCGGTATCATTCTCCCGCAAATCATTTTTGTCGCCGAGGACGACGGCGCTCCAGATCGCGACGATGACAACGGCGTCGTTGGGCTCGATCAAGCTGTGATTAACTCTTACCCTAAATTCCCCTTCTCCAAGGACAAATCTATGGCCGGGGCTAATTGCGTTTGTTCTATTTGTCTATGTGAGTATAAGGAGGCGGAGATGCTGAGGATGATGCCCGAGTGTAGACATTACTTTCATCTCTGTTGCATCGACGCTTGGTTGAAGCTTAATGGCTCTTGCCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTGCAGGAGGTTGTGCCGCTCTCACAATACATGGCGGATCGGAGAAGGAGATGATCGGTCGCTCGATCGATTGATTGATATCGACAACACTCCAATAGGTTCTTCTATTACTTCTACTTTCTCTTAGTTCCATATTCTCTGTTTGTTTTACCTGTTTTTTCTCCTAGGAAATTGTAAATTCTTTGGTTAAGGTGCTGAGTTTTCTCCTATTTTTGAATGTTCTTGGAACTGTTCGACCTATACATGAATTTTTCAATTTACTTTTTGAGTAATTC ATGTCCTCTTCCACATGGCTTCAACTGCTGCAACTCCATTACCATCTCCATCTCCAAATCCTCTTCAATCACTCNTCCGCCCTCCTCCTCGCCTTCTACGTCTGCTGCCGCGCCTCCCGCTCCCGCAACCTCCGTCTCTCTTCTTCCAGGCCGCCTCCCTCGCGCTCCGATGCCGGTATCATTCTCCCGCAAATCATTTTTGTCGCCGAGGACGACGGCGCTCCAGATCGCGACGATGACAACGGCGTCGTTGGGCTCGATCAAGCTGAGGCGGAGATGCTGAGGATGATGCCCGAGTGTAGACATTACTTTCATCTCTGTTGCATCGACGCTTGGTTGAAGCTTAATGGCTCTTGCCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTGCAGGAGGTTGTGCCGCTCTCACAATACATGGCGGATCGGAGAAGGAGATGATCGGTCGCTCGATCGATTGATTGATATCGACAACACTCCAATAGGTTCTTCTATTACTTCTACTTTCTCTTAGTTCCATATTCTCTGTTTGTTTTACCTGTTTTTTCTCCTAGGAAATTGTAAATTCTTTGGTTAAGGTGCTGAGTTTTCTCCTATTTTTGAATGTTCTTGGAACTGTTCGACCTATACATGAATTTTTCAATTTACTTTTTGAGTAATTC ATGTCCTCTTCCACATGGCTTCAACTGCTGCAACTCCATTACCATCTCCATCTCCAAATCCTCTTCAATCACTCNTCCGCCCTCCTCCTCGCCTTCTACGTCTGCTGCCGCGCCTCCCGCTCCCGCAACCTCCGTCTCTCTTCTTCCAGGCCGCCTCCCTCGCGCTCCGATGCCGGTATCATTCTCCCGCAAATCATTTTTGTCGCCGAGGACGACGGCGCTCCAGATCGCGACGATGACAACGGCGTCGTTGGGCTCGATCAAGCTGAGGCGGAGATGCTGAGGATGATGCCCGAGTGTAGACATTACTTTCATCTCTGTTGCATCGACGCTTGGTTGAAGCTTAATGGCTCTTGCCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTGCAGGAGGTTGTGCCGCTCTCACAATACATGGCGGATCGGAGAAGGAGATGA MSSSTWLQLLQLHYHLHLQILFNHSSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRRR Homology
BLAST of CmaCh00G003410 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 4.1e-35 Identity = 86/167 (51.50%), Postives = 98/167 (58.68%), Query Frame = 0
BLAST of CmaCh00G003410 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-31 Identity = 89/194 (45.88%), Postives = 110/194 (56.70%), Query Frame = 0
BLAST of CmaCh00G003410 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.0e-17 Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of CmaCh00G003410 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.6e-13 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CmaCh00G003410 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12 Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0
BLAST of CmaCh00G003410 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein ) HSP 1 Score: 149.1 bits (375), Expect = 2.9e-36 Identity = 86/167 (51.50%), Postives = 98/167 (58.68%), Query Frame = 0
BLAST of CmaCh00G003410 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein ) HSP 1 Score: 137.5 bits (345), Expect = 8.9e-33 Identity = 89/194 (45.88%), Postives = 110/194 (56.70%), Query Frame = 0
BLAST of CmaCh00G003410 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18 Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of CmaCh00G003410 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CmaCh00G003410 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein ) HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13 Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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