CmaCh00G003360 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATCTCTCTCTTTCTCTCTCTTCTTCATCATTTCTTCCACAGATTTGTTTCTTTGGAGAGGGACAGCAACAATGGCGTCGTCCTCCGATTCTACTCCTACGGCCTTCTCTGGCTTCTTCACATGCTTCGCTCTCATCTTCTTCATTCTATTGCCACTCGTTCACGCGCACTCTTCGGCTTCTGCTCCCGCTCCCGCTCCCGCTAGCGACGGTAATCTACGCATCTGATTTCTAAACTCCATCAGCTTTTGTGTCTGCTTTGTCCTTTTTGTTGATTGATGATGATGATGATGATGAATGTAGGTCTTTTCAAATTTTTTATTTGGAAGTGATTTGTTGACAATTTTGTGTAAAATCAGGGACCTCCATAGACCAGGGGATTGCGTACGTGTTGATGCTGATGGCGTTGGTTCTCACATATCTCATCCATCCTCTCGATGCATCTTCCTACCAATTTTTTCTGAATTGA GATCTCTCTCTTTCTCTCTCTTCTTCATCATTTCTTCCACAGATTTGTTTCTTTGGAGAGGGACAGCAACAATGGCGTCGTCCTCCGATTCTACTCCTACGGCCTTCTCTGGCTTCTTCACATGCTTCGCTCTCATCTTCTTCATTCTATTGCCACTCGTTCACGCGCACTCTTCGGCTTCTGCTCCCGCTCCCGCTCCCGCTAGCGACGGGACCTCCATAGACCAGGGGATTGCGTACGTGTTGATGCTGATGGCGTTGGTTCTCACATATCTCATCCATCCTCTCGATGCATCTTCCTACCAATTTTTTCTGAATTGA ATGGCGTCGTCCTCCGATTCTACTCCTACGGCCTTCTCTGGCTTCTTCACATGCTTCGCTCTCATCTTCTTCATTCTATTGCCACTCGTTCACGCGCACTCTTCGGCTTCTGCTCCCGCTCCCGCTCCCGCTAGCGACGGGACCTCCATAGACCAGGGGATTGCGTACGTGTTGATGCTGATGGCGTTGGTTCTCACATATCTCATCCATCCTCTCGATGCATCTTCCTACCAATTTTTTCTGAATTGA MASSSDSTPTAFSGFFTCFALIFFILLPLVHAHSSASAPAPAPASDGTSIDQGIAYVLMLMALVLTYLIHPLDASSYQFFLN Homology
BLAST of CmaCh00G003360 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 9.8e-15 Identity = 45/66 (68.18%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of CmaCh00G003360 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 8.3e-14 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of CmaCh00G003360 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.4e-13 Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of CmaCh00G003360 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.0e-11 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of CmaCh00G003360 vs. TAIR 10
Match: AT2G46330.1 (arabinogalactan protein 16 ) HSP 1 Score: 80.5 bits (197), Expect = 7.0e-16 Identity = 45/66 (68.18%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of CmaCh00G003360 vs. TAIR 10
Match: AT3G61640.1 (arabinogalactan protein 20 ) HSP 1 Score: 77.4 bits (189), Expect = 5.9e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of CmaCh00G003360 vs. TAIR 10
Match: AT5G24105.1 (arabinogalactan protein 41 ) HSP 1 Score: 75.9 bits (185), Expect = 1.7e-14 Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of CmaCh00G003360 vs. TAIR 10
Match: AT5G53250.1 (arabinogalactan protein 22 ) HSP 1 Score: 68.9 bits (167), Expect = 2.1e-12 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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