CmUC11G219890 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G219890
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 7
LocationCmU531Chr11: 28296631 .. 28304397 (+)
RNA-Seq ExpressionCmUC11G219890
SyntenyCmUC11G219890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCCTCAACGCCTCCTATCTTCAGCGCATACCACAACCAACTACACTACTGCCTCCAACGCATAGAAGCCACAGCTCATGACAACCTTACCAACGCATGGTAAGCTAAGAACGTTCCTTCCCCCGCCAACGCGGCGACTGCTTCAGCTCACACCACCATTCGTGATTTCACCTTCAACGCATAGCCGCACTATTATAAACCAGTGCTTACATATGCCACTAGGCGTCAATGACAAACGCGCAATACTATGCGTTTATACCTCATCGCATCATACCATGCGTCCAACTCTCATGTTCATAACGATAAATCCTTCTCAAGTTCTTCCTCTATGCGTTGGTCCTATTGCGTTTACCTTCATCCTGCGTCCATGACCATCTTCCTATCCTTGGACATTCCTTGATTATTCCCAAGGTTATTCTTTTAACCTTTTCCTTGCACTTAAACTATTTCTCTTAAGATAGATTAGCATGCGTCCACCACATGCTCCAGTTTTTATGTTTACTTCACAACCTTCTACTTTCCAACACTTGAAAATATCCTATGATAGAAGTCTATGCGTCTTACTTCTTTCCCTTCAAGTTCTCGGGTACTTCCTATGCGTCCACCTTTACTATGCGTTACCTCAGTCTTGACCATGCGTCCAACATGGTCTTTTATTCCTTTCCTTCAGACTTTTCAACGCATCGGTTGTTAAAAGTTGGATGTCACAATGAGTGTCTTGGGCGACAGGGTCGGACGGTGTGCCCCTTCCCATGGGTTGAAGGTTCTATATAGTACTCGATATGCCATTTTGGCTCGGCATCGACTGGGCATGGACATAGGAGGATTCATGCCTAGATATGTTTGAATGGATGGATGTCCGGAAGTCTCGAGTTGGAAAAGTATCCATGGGTGAATGTGATGTTTCTCAACAAGCCGATTTGAGCAAGGGAGAGAAAACTAATGTTGTCCTGACACTCAGGATGACATTTAGAAGCATATGTAGGACTCGATAGTACCCAGTTGACACGACATTTACCCGAGTTAACTCGGTAAGCATTATGATATCTTGGAAAGCCCCGGTAAGTGTTTGAATGGCTCCGTAAGGCTCGAGTATTATAAGCCTGTTTTGGCCCAATGAAGGGTTCGAACTCATCCCGACATGGTTCTGAAGCAACGTAGAATTACGGAGGTTGTGTTGTTGAGGATCACAATGACGAAGAGAGTTGCAAAGGAGGGAAGTCGAAGAGAGTCGTGAAGGAGGGAAGTCGCACGTACAAGGGACGGGTGGGGCCGAATGAAGTCATTAGGTTAGTTCGGTTAAGGAAAGAAGAACCTTGCCTAAGGTCCGACGAAGCTTAAAAAAGAATAGGCAAAAAGTAGATTGAAACTTGTGTTTCCCTTAAGACTGACCATGATTAAGCGTGAAGCATGGTGCCACACGGTTGGAGAAGTATGTCCGTGCATAGCAAATGGTTTCAAAAGTTTTTCATTTCATTACGGCCTAACCTTAGTATACTTTCACTATATGTAGGTAAATTTATCAAAAACCCAAGGAGAGACCAAAAAGAAAAAACAAATTTCTCAATGAAAACCTTATAATCATGGTTTGAATAATAATAATAATTTCTTCAATTTTCTCCTTGATGAGTTATAGCTATTCACCACTTGGTTTATAATGTCCTTTGTTTTAGTTATAGCCATCTGCAGATTATTAATGAACTTTTTTATGAAATCAATGTGAAGGTAAACTAAGATTTTGATTCATTGAATTAGCATTTTGATCAAACAGAGTTGGTAGGTTTTCATTTTCGTCGTTCAACAACATATTCAAAAAAAGGAGACCTAATTATGAAGGTAAAGTTGTCCCACCTCCGTGAATTGCTCATTCTGTCATTGCGGTGGTCATCTTCGTTAAACAAATTGCACTTTGGTTGTCACATAAAATATTAACTATTTTCTGAGTAAACCCAAGGTCTTGAATTAAACTTTGTAACCAAATTGCCTTTGGTTGTCACATAAAATATTAACTATTTTCTGAGTAAACCCAAACTCTTGAATTAAACTTTGTAACCAGATTGCTTCCTAAACCCAAGGTCTTGAATTAAACCTTGTAACCAAATTGTTCCTTTACAACTTTTGAAGTTGTAATGAATTAGAGTGCAACAACTAATTGAAAGTTTAATTTCCAGGATATTGTGTTTCCTCCAAATGTATATGTATATCCAGTTAATGATCTTCTATCCAAATCACTTGCAAAATCGGAATCTACAAATCCAAGTAGTTCCATATTAGTTGTATTGGGTAGTTTAAACCATAATCTTCTATTGGTAGTGCCATTTAGTACCTATTTGGTTGCTTACAAATGAACAACCCTTGTTTTTTCTCAACATATCCTTTGAGCTTACAAACGAACAACCCTTGTTTTTTCTTTAACATATTCTTCAGGTTGATTCATATATATGTTTTAAGGACATTTTAAGAACTTGTTTGGATTAACTGACAGAATAAATGTTTTTTAAGAATTCATTTTCATTTAAACACCCTTGATAAAAAGTGTTCAAAATAATACCTATACTTTCAAAATCTATTTTGAGTGCTTTTAAACACTTGAAAAGCATCACAAGCGAAAACGAGGAAGAAAAAGAAGTCGATTGAAGTTACTCACGTGAACTCACCGAAGAAGATGGGAAAAAAGGAAAGAAAAAGAAAACAACTTCATAGAAAAAGGTTCAGGTAGAAGAAAAAAGAGAATGAAAAAAAAAACCCCGAAGATGAAAGAAGAGAAAAAAATAAAATGAGAGCTCGTAAATGCTTAAAAATGATATAAGCAATGGGTAAAAAATTTTAAGTTTTAAAAAGTGGACAAAACTCATTTTAGATTTTTGGTTGTTTTAATCAATTATCTCCTCTTCTTCTCTTTTTTCCTCTGTCTTTTATTTTATTTCAGGTGTGTTGCCGAATTTAGATTTAGGGAAAACTCAAGCGTTGGGTCGCCGGACTGTTCGCATCGCTCGCCGGAAGTCGAGAATCCGTGGGTGTCGGATTTTCTGTGCCGTGTGGTTCACCGGAAGCTGCCACGCGTGATTCGCCGGGGGGAGTCCGTTCGCCGGGCGTTGCTGAGTTGTGGAGCTCGCTGGAGCGGTGAGGTATTCTCCGGAATTGGGTTTTGCTATAATTTTCCTTTTGTACCTCACTGTGTGTAAATATTTCTGCTCACTTCTCACTTTAATCTCTTCTCCATTTCTGCTCACCACCTCTCTAATTCCATTGTGTATCCTTGCAAATAAAATGGCCTAAATTGGCTTATTAGAGAGTGAATTGTTGAAATCTTTTTCCTTTTTCCCTTTTTAGATTTTTTAAAAAAGAAATCTTACAAAATATATACAATTGATGTTAATTACAATTGCTTTATGCTACTAACTAACGAACTCATATGTATCCGGAGAAAGACGGGCGGTTATTAAAGATTGTAAATATAGTTTGTTTGTTTATGGTAATACGATGATAAACTTTGTGGTGTTTCTTTCAGAATTTGGCTGAGATGCACAGTCCGGAGAAATTGGATGGCGATTATTCTGCCACCGCGGACAGCAACGTCTCGGCTGAATTGGAGACTTCCATTAGTCCCAATGGTGATCTCCAGGAAGGAAATGATGGTGAAAATAAGAACATAGGAAACTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTCGACTCCAAAGCTGATGATACTCTTACAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCGTCTTACTACAGGTAAAATAGAATTGATTCCTTCTAGTTTGACTAATTATAATATAGCTATGAACCTCCTGCTAGCGAGTCATTCTTTGATGTGCTTTGGAGGATTAAGATCCCTAAGAAAGTTAACATCTTTACCTGGCAAGTTTTACTTGGCCATGTGCTATGCTTATGGGGTTTTTTTAATTGTATTCTTTGTTGGAAGACGTGAATCACCTTTTCTTGAGTTGTTAGTTTGTGAGATCCGTGTGGAACTATTTCTTACAAGAGTTTGATCTTGAGGTAGCTCGCCAAAGAGATGTTTGGAAGACAATCAAGGAGTTCCTTCTCCATCCGCCTTTCAAAGAGAAAGGCCGGTTTATATGGTTTGCTGGGGGGTGTGCTTTATTGTTGGATATTTGGGGGGAGAGGAATAACAAAGTTTTTAGAGGTGTAGAGAGGGACCATGATGATGTATGGTCCTTGGTTAGTTTCTATGCTTCTCTTTGGACATCGGTTTTGAAAGACTTTTTGTAATTATCCTCTAGGTAGTATCTTACTTAGCTAGAAACCTTGTTTTTAGAGGAGTTTCGTGGGCTTGTTTTTTGTGACCCTTGAATTTTTTCATTTTTCTCAATGAGAGCGGTTGTTTCTATAAAAAAGAAAAGTATAGCTTTGAAGATTCTGTCACTTGCTAGGTCTAAGAGAAGTTTATGCATCATAAATGACATTCTCTCATAGTTACCTTTTTTCCCGTCTTGGATGCAAAAAATGCAGCTTCTGAATTTCATTTCTTTTCAATGTTGTGAAAAGTTATTATTTTAACTGTTAGCAGAATTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAACGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGAACCATACAGCGAAGAGTGGATAACATAGATCGGGCAATCTCGATGGGCAATCTACCAGGTGATTGACTTCTCTCTTCAATGGCCTCAATTTTACTGTCTTTTTTTATTGCTTTTAGTTTAATACAAACTTATTGGATAATATCATTGGTTGTTAAGTTTTGTTCAAGAACAATCCTTTTTCTTGTTTATAAAAGAACACATGTAGATTATAACGACCTGTGTTTCTTATTCTCTCCATTTTATTGGGAAAGAAAGGTGTTATCATATTTGTTTTGTGTTTTCTGTCTTTTTATTTATTCAACATAAAAGTTACAAGAGTGAGAGTTGCCCTTTGTTCTTCCTGGCATTCCCTATATAATTGATTTTGTAGCTATACGTTTTTTTATAATGAACTCTAATTGGGTTGTTTCTGTAAGCACCCAATAGTTAACTGTTAATTCAGGTTTGATTTGTAACTATTCACTTCATTAATGAACTGCGTTGGAGTCTTTTGCTCTTCAGATAGCAAGATAGAATCAAGATATTCATTGGAAAACCTCAGTTCCTTCTTATGGAAGATTTTAAACCTTCACATTAGCATGTGGATCATGAAAATTTTTAATCATGGTCTTAAACATACCAAGAAGGATCTTTCCCTCTTGTATAGAGAGATGGAATTGAGATCATCATTGCAAAACCTCTGTTCTTCCTTCTCAGGATTTATTATTCAAATATCATGTCTTCCCCCCTCTTTGATACATGTGCATTTGGACGTGTAACTAATGTACGCTACATTGGACCATAAGATTTGAGAAGTATTTACCAAAAGAGGGCCCACCAAGAGCTGAAGAATATTATCCCAAAAAGACATGGCAAAGATCCACTGAAGATGGAAAAAAGAGAAACATTTCTCCCAGCTGATTTAGGGAAGTTACACTCAAAGAACAAATGTTGCAAGTCTTTCACTTTGAGCCAAACATTAAGAGAACCAAGTAGGATAGTCCAAATGAGAACATTAATTCTTTTTGAACTTTTGGACTTCCAAAGTGCTTGATAAACAACTTTATCTAATGGGAAGGCCGCCATTAGATGCTTAAATAAAGAATTAACCATGAAGCATCCAGAGGGAGGGAACGCCCAACATCTTGAGTCTTGAGAAGAAGAAGGTTGTAAGGAGTCCAAACAACACAATAGTTGCTGAAAATCAGAAATTTCCTCTTTCTTTTAGAAGCCTTCTGAAAGTAATATGCTAAGGATTAATATTTGCATCCCAATGATCAAAGACAGAACCATCGGAATCATTAGGTTAAGGATCTATTCTCTTGTGTTCAAATAGTAGGTTCATGATTTGTTATAACCATGCTTTTTCGGTTGTAAATCATGATTTTGTTTTGCTTTCTGGATGTTTAAGCTTACGTCTGGTAATGCAGCCATGGGACGAATCATTTTGCATCTGAACATGCTAGTTTCAATTTTGACAACTTGAATTCTTTCTTCTTTGTGCAGTTTGTGATGTTAATGACATATACTTTCATGAGAGGCAGATAAAAAAAAAAATCCATTTATTAAAATATAGTTTTTTTAAACCATCATGGGTTGACCAAGTGATAAAAAAGGAGACATAGCCTCAATAAATTGCTAAGAGGTCATGGGTTCAATCCATGGTGACCACTTACGGAGGATTTAATATTCTACGAGTTTTTTTGACACCCAAATGTTGTAGGGTATGGCAGGTTGTCTTGTGAGATTAGTCGATGTGCGCGTAAGTTAGCCCAGACACTCATGGATATAAAAAGAAAAATATATATATAGCTTTTAATTGAATTTCCTTTAGTTTCCAAGCAATTAAACATCTAGGTATGTAGGATAGTGAATGTTCACATGTATCCACCATGACCCAGCGGTTAGAGATTGATAATTTGTTTGAAGCTTCTAGTATCTTTTTAACCATAATAAGTGAAGTAAATTTACTTGTAATGTCTTCTTCCTTATCCTTGTAATTGATGTGTACTTCTTAAGGTTGGAGATTTAAATCCCCATGCCCAAAATTTATTGTACTGAAAGGAAAAAAAAAAAAAGAATAATGAAGTAAAATTTTAGAGTGGCTCCTAACAGAAGCTTATATATGAACTCTTATACCATCTCTAGATGTTAAGGTCCTAGTGTACTATTTAAGAGATATTACTCTACTAGAATCAATGCCTTGTGTTTTCATGACTTTTATGGATATGCATAAATATTCATTTATCTTTTCCTTTCCTTCAGGCCTTCCCTTCTCATTATTTTAGTCTGCATCAATGTGATATAAGTTATAGTCTTTATAGGCAAAGAAATTACTTACTCAGTATTCACTTTTACCAATTACCATGGAATGAAAGATTCCTTCAGATTAAGGTCTTATGATTTGGATCCTCACCAAAGGTTTCTAGATTAATTGCATATTTTCTGATTGACAGTCCATAACCAATGGGGGTACGCATTCATTTTGTGGTTCATTTAATTAGCGTGAGTATTTAGATATCTCCATGTTATTTATTTCCTTGACTCATTGTGTGAGTACTAATTAGGGTTATATTGGAAATATTAGTATAATATTAGCAAGGGCATTGTGGTAATTAGATAAGTGTGCTTTGGTTTTAAATAGAGGGTGTTAGGAATCTTAGAAGGGAAGAGTGATTTTGGTATTGTCCAGTGTTGAGGATCGCACATTGGATAAATAAAGAGACCTCACACTTTTTATAAGATAGATAGACTACTCTAATTGTCAATTGGTTTTGAGATGGAACCTCATGTTATTTAAACTTTGGGAGAAAGATAGCCCTCTCGAAAGACTATTACTATATTGTAGTTTTCTTTTATATTATACATTATGATCTTAGTGAACTAGGGCTTGGAAGAGATCTCAAGAGAGGAAAAGTGCAAGTGCAACTACCTCGAATTACTTGTTTATCTTGTAGTTCTTCTTAATATTGCAATATGTTCGTTATCTATATATTTTCTTTATTTGAATACCTAACACATTTGACACTAATATATTTGTTGTTACATCTACAGATACTCGTTCCTCTCAAAATTCCTCCCAGCTTTAA

mRNA sequence

ATGGCGCCCTCAACGCCTCCTATCTTCAGCGCATACCACAACCAACTACACTACTGCCTCCAACGCATAGAAGCCACAGCTCATGACAACCTTACCAACGCATGGGTCGGACGGTGTGCCCCTTCCCATGGGTTGAAGGTTCTATATAGTACTCGATATGCCATTTTGGCTCGGCATCGACTGGGCATGGACATAGGAGGATTCATGCCTAGATATTACCCAGTTGACACGACATTTACCCGAGTTAACTCGGTAAGCATTATGATATCTTGGAAAGCCCCGAATTACGGAGGTTGTGTTGTTGAGGATCACAATGACGAAGAGAGTTGCAAAGGAGGGAAGTCGAAGAGAGTCGTGAAGGAGGGAAGTCGCACGTACAAGGGACGGGTGGGGCCGAATGAAGTCATTAGGTTAGTTCGGTTAAGGAAAGAAGAACCTTGCCTAAGGTGTGTTGCCGAATTTAGATTTAGGGAAAACTCAAGCGTTGGGTCGCCGGACTGTTCGCATCGCTCGCCGGAAGTCGAGAATCCGTGGGTGTCGGATTTTCTGTGCCGTGTGGTTCACCGGAAGCTGCCACGCGTGATTCGCCGGGGGGAGTCCGTTCGCCGGGCGTTGCTGAGTTGTGGAGCTCGCTGGAGCGGTGAGAATTTGGCTGAGATGCACAGTCCGGAGAAATTGGATGGCGATTATTCTGCCACCGCGGACAGCAACGTCTCGGCTGAATTGGAGACTTCCATTAGTCCCAATGGTGATCTCCAGGAAGGAAATGATGGTGAAAATAAGAACATAGGAAACTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTCGACTCCAAAGCTGATGATACTCTTACAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCGTCTTACTACAGAATTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAACGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGAACCATACAGCGAAGAGTGGATAACATAGATCGGGCAATCTCGATGGGCAATCTACCAGATACTCGTTCCTCTCAAAATTCCTCCCAGCTTTAA

Coding sequence (CDS)

ATGGCGCCCTCAACGCCTCCTATCTTCAGCGCATACCACAACCAACTACACTACTGCCTCCAACGCATAGAAGCCACAGCTCATGACAACCTTACCAACGCATGGGTCGGACGGTGTGCCCCTTCCCATGGGTTGAAGGTTCTATATAGTACTCGATATGCCATTTTGGCTCGGCATCGACTGGGCATGGACATAGGAGGATTCATGCCTAGATATTACCCAGTTGACACGACATTTACCCGAGTTAACTCGGTAAGCATTATGATATCTTGGAAAGCCCCGAATTACGGAGGTTGTGTTGTTGAGGATCACAATGACGAAGAGAGTTGCAAAGGAGGGAAGTCGAAGAGAGTCGTGAAGGAGGGAAGTCGCACGTACAAGGGACGGGTGGGGCCGAATGAAGTCATTAGGTTAGTTCGGTTAAGGAAAGAAGAACCTTGCCTAAGGTGTGTTGCCGAATTTAGATTTAGGGAAAACTCAAGCGTTGGGTCGCCGGACTGTTCGCATCGCTCGCCGGAAGTCGAGAATCCGTGGGTGTCGGATTTTCTGTGCCGTGTGGTTCACCGGAAGCTGCCACGCGTGATTCGCCGGGGGGAGTCCGTTCGCCGGGCGTTGCTGAGTTGTGGAGCTCGCTGGAGCGGTGAGAATTTGGCTGAGATGCACAGTCCGGAGAAATTGGATGGCGATTATTCTGCCACCGCGGACAGCAACGTCTCGGCTGAATTGGAGACTTCCATTAGTCCCAATGGTGATCTCCAGGAAGGAAATGATGGTGAAAATAAGAACATAGGAAACTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTCGACTCCAAAGCTGATGATACTCTTACAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCGTCTTACTACAGAATTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAACGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGAACCATACAGCGAAGAGTGGATAACATAGATCGGGCAATCTCGATGGGCAATCTACCAGATACTCGTTCCTCTCAAAATTCCTCCCAGCTTTAA

Protein sequence

MAPSTPPIFSAYHNQLHYCLQRIEATAHDNLTNAWVGRCAPSHGLKVLYSTRYAILARHRLGMDIGGFMPRYYPVDTTFTRVNSVSIMISWKAPNYGGCVVEDHNDEESCKGGKSKRVVKEGSRTYKGRVGPNEVIRLVRLRKEEPCLRCVAEFRFRENSSVGSPDCSHRSPEVENPWVSDFLCRVVHRKLPRVIRRGESVRRALLSCGARWSGENLAEMHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLINIIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAISMGNLPDTRSSQNSSQL
Homology
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BLAST of CmUC11G219890 vs. NCBI nr
Match: XP_008444284.1 (PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444285.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444286.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo])

HSP 1 Score: 263.1 bits (671), Expect = 3.7e-66
Identity = 142/153 (92.81%), Postives = 145/153 (94.77%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MH PEKLD DYSA  DSNVSAELETSISP GDLQEGNDGENKN+GNSNALANGLSSMLIN
Sbjct: 1   MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           IIRDFDSKADDTL SQ+ LSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPDTRSSQNSSQ 373
           SILRTIQRRVDNIDRAI+MGNLPDTRSS NSSQ
Sbjct: 121 SILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQ 153

[Close]
BLAST of CmUC11G219890 vs. NCBI nr
Match: XP_004144641.1 (uncharacterized protein LOC101218072 [Cucumis sativus] >XP_031740504.1 uncharacterized protein LOC101218072 [Cucumis sativus] >KAE8649780.1 hypothetical protein Csa_012268 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 9.1e-65
Identity = 139/153 (90.85%), Postives = 145/153 (94.77%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MHSPEKLD DYSA  DSNVSAELETSI+ NGDLQEGND ENKN+GNSNALANGLSSMLIN
Sbjct: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           IIRDFDSKADDTL SQ+ LSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPDTRSSQNSSQ 373
           SILRTIQRR+DNIDRAI+MGNLPDTRSS +SSQ
Sbjct: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQ 153

[Close]
BLAST of CmUC11G219890 vs. NCBI nr
Match: XP_038897517.1 (uncharacterized protein LOC120085558 isoform X2 [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 4.5e-64
Identity = 136/144 (94.44%), Postives = 139/144 (96.53%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MHSPEKLDGDYSA  +SNV +ELETSISPNGDLQEGND ENKN+GNSNALANGLSSMLIN
Sbjct: 1   MHSPEKLDGDYSANEESNVLSELETSISPNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           IIRDFDSKADDTL SQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPD 364
           SILRTIQRRVDNIDRAISMGNLPD
Sbjct: 121 SILRTIQRRVDNIDRAISMGNLPD 144

[Close]
BLAST of CmUC11G219890 vs. NCBI nr
Match: XP_038897521.1 (uncharacterized protein LOC120085558 isoform X5 [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 4.5e-64
Identity = 136/144 (94.44%), Postives = 139/144 (96.53%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MHSPEKLDGDYSA  +SNV +ELETSISPNGDLQEGND ENKN+GNSNALANGLSSMLIN
Sbjct: 1   MHSPEKLDGDYSANEESNVLSELETSISPNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           IIRDFDSKADDTL SQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPD 364
           SILRTIQRRVDNIDRAISMGNLPD
Sbjct: 121 SILRTIQRRVDNIDRAISMGNLPD 144

[Close]
BLAST of CmUC11G219890 vs. NCBI nr
Match: XP_038897515.1 (uncharacterized protein LOC120085558 isoform X1 [Benincasa hispida] >XP_038897516.1 uncharacterized protein LOC120085558 isoform X1 [Benincasa hispida])

HSP 1 Score: 254.6 bits (649), Expect = 1.3e-63
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MHSPEKLDGDYSA  +SNV +ELETSISPNGDLQEGND ENKN+GNSNALANGLSSMLIN
Sbjct: 1   MHSPEKLDGDYSANEESNVLSELETSISPNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           IIRDFDSKADDTL SQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPD 364
           SILRTIQRRVDNIDRAISMGNLP+
Sbjct: 121 SILRTIQRRVDNIDRAISMGNLPE 144

[Close]
BLAST of CmUC11G219890 vs. ExPASy TrEMBL
Match: A0A1S3BAU4 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucumis melo OX=3656 GN=LOC103487651 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-66
Identity = 142/153 (92.81%), Postives = 145/153 (94.77%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MH PEKLD DYSA  DSNVSAELETSISP GDLQEGNDGENKN+GNSNALANGLSSMLIN
Sbjct: 1   MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           IIRDFDSKADDTL SQ+ LSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPDTRSSQNSSQ 373
           SILRTIQRRVDNIDRAI+MGNLPDTRSS NSSQ
Sbjct: 121 SILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQ 153

[Close]
BLAST of CmUC11G219890 vs. ExPASy TrEMBL
Match: A0A6J1IKP2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111477110 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.3e-53
Identity = 125/153 (81.70%), Postives = 135/153 (88.24%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MHSPEK+  D  A  DS+ S ELETSIS NG+L+E ND  N N+ NSNALANGLSSMLIN
Sbjct: 1   MHSPEKVLDD-PANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           IIRDFDSKADDTL SQSQLSSSLDR+TTELDQLLEDAPFPFIMQHASRIS+VRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPDTRSSQNSSQ 373
           SILR+IQRR+DNIDRAISMGN PDT SSQ+ SQ
Sbjct: 121 SILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQ 152

[Close]
BLAST of CmUC11G219890 vs. ExPASy TrEMBL
Match: A0A6J1FEP4 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.3e-53
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MHSPEK+  D  A  DS+VS ELETSIS NGDL+E ND  N N+ NSNALANGLSSMLIN
Sbjct: 1   MHSPEKVLDD-PANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           IIRDFDSKADDTL SQSQLSSSLDR+TTELDQLLE APFPFIMQHASRIS+VRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEAAPFPFIMQHASRISSVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPDTRSSQNSSQ 373
           SIL +IQRR+DNIDRAISMGN PDT SSQ+SSQ
Sbjct: 121 SILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQ 152

[Close]
BLAST of CmUC11G219890 vs. ExPASy TrEMBL
Match: A0A6J1FIR1 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111445840 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.3e-53
Identity = 123/153 (80.39%), Postives = 135/153 (88.24%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MHS EK+  D SA  DS VSAELE SISPNGD++E ND  N N+G+SNALANGLSSML+N
Sbjct: 1   MHSLEKVHDD-SANKDSKVSAELEPSISPNGDIEEENDIANMNLGDSNALANGLSSMLMN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 339
           I+RDFDSKADDTL SQSQLS SLDRLT+ELDQLLEDAPFPFIMQHA RIS+VRKRVLSLN
Sbjct: 61  IMRDFDSKADDTLKSQSQLSFSLDRLTSELDQLLEDAPFPFIMQHALRISSVRKRVLSLN 120

Query: 340 SILRTIQRRVDNIDRAISMGNLPDTRSSQNSSQ 373
           SILR++QRRVDNIDR ISM NLPD RSSQ+SSQ
Sbjct: 121 SILRSVQRRVDNIDRVISMSNLPDIRSSQSSSQ 152

[Close]
BLAST of CmUC11G219890 vs. ExPASy TrEMBL
Match: A0A6J1F9C2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-51
Identity = 126/160 (78.75%), Postives = 135/160 (84.38%), Query Frame = 0 

Query: 220 MHSPEKLDGDYSATADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLIN 279
           MHSPEK+  D  A  DS+VS ELETSIS NGDL+E ND  N N+ NSNALANGLSSMLIN
Sbjct: 1   MHSPEKVLDD-PANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLIN 60

Query: 280 IIRDFDSKADDTLTSQSQLSSSLDRLT-------TELDQLLEDAPFPFIMQHASRISNVR 339
           IIRDFDSKADDTL SQSQLSSSLDR+T       TELDQLLE APFPFIMQHASRIS+VR
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRITTVITSTFTELDQLLEAAPFPFIMQHASRISSVR 120

Query: 340 KRVLSLNSILRTIQRRVDNIDRAISMGNLPDTRSSQNSSQ 373
           KRVLSLNSIL +IQRR+DNIDRAISMGN PDT SSQ+SSQ
Sbjct: 121 KRVLSLNSILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQ 159

[Close]
BLAST of CmUC11G219890 vs. TAIR 10
Match: AT1G79070.1 (SNARE-associated protein-related )

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-27
Identity = 70/137 (51.09%), Postives = 95/137 (69.34%), Query Frame = 0 

Query: 234 ADSNVSAELETSISPNGDLQEGNDGENKNIGNSNALANGLSSMLINIIRDFDSKADDTLT 293
           +D   SA+  TS   +   ++G  G     G   A+A GLS+ML ++I+DFDSKA DTL 
Sbjct: 7   SDHRDSADATTSSCQSTTAEDGQCG-----GGGEAMARGLSAMLESVIKDFDSKALDTLN 66

Query: 294 SQSQLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRVDNID 353
           SQ +LS SLDRL  ELDQLLE+AP PFI+QHASRIS+V++RV SLN +L+++QRR+DNID
Sbjct: 67  SQDELSGSLDRLVQELDQLLENAPLPFIVQHASRISSVKQRVSSLNLVLKSVQRRIDNID 126

Query: 354 RAISMGNLPDTRSSQNS 371
             +S     +  SS+ +
Sbjct: 127 HMLSANTTQEKASSETT 138

The following BLAST results are available for this feature:
BLAST of CmUC11G219890 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008444284.13.7e-6692.81PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444285.1 P... [more]
XP_004144641.19.1e-6590.85uncharacterized protein LOC101218072 [Cucumis sativus] >XP_031740504.1 uncharact... [more]
XP_038897517.14.5e-6494.44uncharacterized protein LOC120085558 isoform X2 [Benincasa hispida][more]
XP_038897521.14.5e-6494.44uncharacterized protein LOC120085558 isoform X5 [Benincasa hispida][more]
XP_038897515.11.3e-6393.75uncharacterized protein LOC120085558 isoform X1 [Benincasa hispida] >XP_03889751... [more]
BLAST of CmUC11G219890 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC11G219890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BAU41.8e-6692.81Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucumis melo OX... [more]
A0A6J1IKP22.3e-5381.70Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxim... [more]
A0A6J1FEP42.3e-5382.35Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch... [more]
A0A6J1FIR12.3e-5380.39Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch... [more]
A0A6J1F9C22.8e-5178.75Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch... [more]
BLAST of CmUC11G219890 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G79070.11.2e-2751.09SNARE-associated protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 295..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..263
IPR028119Snapin/Pallidin/Snn1PFAMPF14712Snapin_Pallidincoord: 268..352
e-value: 9.1E-21
score: 74.1
IPR017246SnapinPANTHERPTHR31305SNARE-ASSOCIATED PROTEIN SNAPINcoord: 240..371

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G219890.1CmUC11G219890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0031083 BLOC-1 complex