CmUC11G216230 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G216230
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RING-H2 finger protein ATL56
Location	CmU531Chr11: 24487272 .. 24487808 (-)
RNA-Seq Expression	CmUC11G216230
Synteny	CmUC11G216230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTTTCAAGATTCCGCCGCCGTGAGCGGCGACCCACTTCCCCACCCACCGCCACCGCCGAAGCCAGAAACTCAACTCCTCTCCCTGCTCCTCAAGGTCGCCATCATGATTCTCTTAACCACTCTCTTCTTTGTCTTCCTCGGCCTCGCCACAGCCCTTCTTCTAATCCACCTCTGCGTCGCCAGCGCCGTCCACCGTCGTCGCCGCTTCCACCGTCGCCGTGCTCAATTCCCCGATTCCTCATCTGGTTTCTCCAATCGTGACCTCAAAAAGCTCCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCCCAAATTGACTGCTCTATTTGCCTCGATGGGTTTAGAAAAGGCCAGTGGTGTAGGAAACTTGGTGGGTGTGGCCATGTTTATCATCGGAAGTGTATCGATTCGTGGTTAGTTAGGGTTTCTGCTTGCCCCCTTTGCCGACGATGTGTTCGATTGGATATGGAAGAACGTGAAATTGATTGTGTAAGTTCTCAGAACTATGAGCTTTTGTATGCTCTGTAA

mRNA sequence

ATGCCCTTTCAAGATTCCGCCGCCGTGAGCGGCGACCCACTTCCCCACCCACCGCCACCGCCGAAGCCAGAAACTCAACTCCTCTCCCTGCTCCTCAAGGTCGCCATCATGATTCTCTTAACCACTCTCTTCTTTGTCTTCCTCGGCCTCGCCACAGCCCTTCTTCTAATCCACCTCTGCGTCGCCAGCGCCGTCCACCGTCGTCGCCGCTTCCACCGTCGCCGTGCTCAATTCCCCGATTCCTCATCTGGTTTCTCCAATCGTGACCTCAAAAAGCTCCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCCCAAATTGACTGCTCTATTTGCCTCGATGGGTTTAGAAAAGGCCAGTGGTGTAGGAAACTTGGTGGGTGTGGCCATGTTTATCATCGGAAGTGTATCGATTCGTGGTTAGTTAGGGTTTCTGCTTGCCCCCTTTGCCGACGATGTGTTCGATTGGATATGGAAGAACGTGAAATTGATTGTGTAAGTTCTCAGAACTATGAGCTTTTGTATGCTCTGTAA

Coding sequence (CDS)

ATGCCCTTTCAAGATTCCGCCGCCGTGAGCGGCGACCCACTTCCCCACCCACCGCCACCGCCGAAGCCAGAAACTCAACTCCTCTCCCTGCTCCTCAAGGTCGCCATCATGATTCTCTTAACCACTCTCTTCTTTGTCTTCCTCGGCCTCGCCACAGCCCTTCTTCTAATCCACCTCTGCGTCGCCAGCGCCGTCCACCGTCGTCGCCGCTTCCACCGTCGCCGTGCTCAATTCCCCGATTCCTCATCTGGTTTCTCCAATCGTGACCTCAAAAAGCTCCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCCCAAATTGACTGCTCTATTTGCCTCGATGGGTTTAGAAAAGGCCAGTGGTGTAGGAAACTTGGTGGGTGTGGCCATGTTTATCATCGGAAGTGTATCGATTCGTGGTTAGTTAGGGTTTCTGCTTGCCCCCTTTGCCGACGATGTGTTCGATTGGATATGGAAGAACGTGAAATTGATTGTGTAAGTTCTCAGAACTATGAGCTTTTGTATGCTCTGTAA

Protein sequence

MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLCVASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL

Homology

[Close]

BLAST of CmUC11G216230 vs. NCBI nr
Match: XP_038889631.1 (RING-H2 finger protein ATL56-like [Benincasa hispida])

HSP 1 Score: 347.1 bits (889), Expect = 9.3e-92
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLK+AIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           VASA+HR RRFHRRRAQF DSS+GFS+RDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRHRRFHRRRAQFSDSSTGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLD EE EIDCVSS NYELLYAL
Sbjct: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDKEELEIDCVSSPNYELLYAL 178

[Close]

BLAST of CmUC11G216230 vs. NCBI nr
Match: XP_008452306.1 (PREDICTED: RING-H2 finger protein ATL56 [Cucumis melo] >KAA0048646.1 RING-H2 finger protein ATL56 [Cucumis melo var. makuwa] >TYK10847.1 RING-H2 finger protein ATL56 [Cucumis melo var. makuwa])

HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 165/178 (92.70%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MPFQ SAAVSGDPLPHPPPPPKPETQLLSLLLK+AIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQHSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           VASA+HRRRRFH RR+Q+ DSSSGFS+RDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCR+LGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEE EIDCVSS+N+EL YAL
Sbjct: 121 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 178

[Close]

BLAST of CmUC11G216230 vs. NCBI nr
Match: XP_004149098.1 (RING-H2 finger protein ATL56 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 5.7e-89
Identity = 163/178 (91.57%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MPFQ SAAVSG PLPHPPPPPKPETQLLSLLLK+AIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           VASA+HRRRRFH R +Q+ DSSSGFS+RDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCR+LGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEE EIDCVSS+N+EL YAL
Sbjct: 121 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 178

[Close]

BLAST of CmUC11G216230 vs. NCBI nr
Match: XP_022929717.1 (RING-H2 finger protein ATL56-like [Cucurbita moschata])

HSP 1 Score: 308.5 bits (789), Expect = 3.7e-80
Identity = 150/178 (84.27%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MP QDSAA SGDPLPHPPPPPKPE +LLSLLLKVA+MI  TTLFF+FLGLATALLL HLC
Sbjct: 1   MPLQDSAAGSGDPLPHPPPPPKPEAKLLSLLLKVAVMIFFTTLFFIFLGLATALLLFHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           +ASA+      HRRRAQ+PDSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKG
Sbjct: 61  IASAL------HRRRAQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCRKLGGCGHVYHRKCIDSWLVRVS CPLCRRCVRLDMEE +I+CVS +NYE+LYAL
Sbjct: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSTCPLCRRCVRLDMEEHKINCVSPRNYEILYAL 172

[Close]

BLAST of CmUC11G216230 vs. NCBI nr
Match: XP_023546946.1 (RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.1 bits (788), Expect = 4.8e-80
Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MP QDSAA SGD LPHPPPPPKPE +LLSLLLKVA+MI  TTLFFVFLGLATALLL HLC
Sbjct: 1   MPLQDSAAASGDSLPHPPPPPKPEGKLLSLLLKVAVMIFFTTLFFVFLGLATALLLFHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           +ASA+      HRRRAQ+PDSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKG
Sbjct: 61  IASAL------HRRRAQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCRKLGGCGHVYHRKCIDSWLVRVS CPLCRRCVRLDMEE +I+CVSS+NYE+LYAL
Sbjct: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSTCPLCRRCVRLDMEEHKINCVSSRNYEILYAL 172

[Close]

BLAST of CmUC11G216230 vs. ExPASy Swiss-Prot
Match: Q9ZV51 (RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-32
Identity = 81/170 (47.65%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPP--PPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIH 60
           MP  ++  +SG+P    P  PPPKP+T++LSL L   IM  +  LF V +G+A+ L+L  
Sbjct: 1   MPPTNNYRISGEPPSTTPSHPPPKPKTRILSLFLVGVIMFSIFFLFLVLIGIASVLILPL 60

Query: 61  LCVASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSN-WVNPHSQIDCSICLDGF 120
           L   S++HR  R  RRR +  +SS G S+R +KKL QF+FS        + DC +C DGF
Sbjct: 61  L--LSSLHRHHR-RRRRNRRQESSDGLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGF 120

Query: 121 RKGQWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRL---DMEEREI 165
           R+GQWCR L GCGHV+HRKC+D+WL++ S CP+CR  VRL   D +E E+
Sbjct: 121 RQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARVRLWEEDPQEGEL 167

[Close]

BLAST of CmUC11G216230 vs. ExPASy Swiss-Prot
Match: Q9M0C3 (RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22
Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 8   AVSGDPLPHPPPP----PKPETQLLSLLLKVAIMILLTTLFFVF----LGLATALLLIHL 67
           ++S +P P PPPP        T++LS  L   IMI +    F+F    LG          
Sbjct: 10  SISREPSPSPPPPKANTKNLPTKILSNFLIGLIMIPVAITAFIFILTSLGFTFFFAFYWF 69

Query: 68  CVASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRK 127
              +  HR RR HRR     + S G S R +K+L QF++    + +   DC +C+DGFR+
Sbjct: 70  LQRNYRHRLRR-HRRH----EYSDGLSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQ 129

Query: 128 GQWCRKLGGCGHVYHRKCIDSWLVRVSACPLCR 153
           GQWCRKL  CGHV+HRKC+D WL++VS CP+CR
Sbjct: 130 GQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICR 157

[Close]

BLAST of CmUC11G216230 vs. ExPASy Swiss-Prot
Match: Q9FKX5 (NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 82  SSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRKLGGCGHVYHRKCIDSW 141
           S G +   L ++ + R ++  +P   + CS+CL  F+ G+  R L  C H++H  CID W
Sbjct: 150 SKGLTGDSLNRIPKVRITD-TSPEI-VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKW 209

Query: 142 LVRVSACPLCRR 154
           L R ++CPLCRR
Sbjct: 210 LRRHASCPLCRR 219

[Close]

BLAST of CmUC11G216230 vs. ExPASy Swiss-Prot
Match: Q8LBA0 (NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 26/73 (35.62%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 84  GFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRKLGGCGHVYHRKCIDSWLV 143
           G S   L+KL  +  S+ +       C+ICL   + G+  R L  C H +H  C+D WL+
Sbjct: 150 GLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLI 209

Query: 144 RVSACPLCRRCVR 157
           R  +CP+CR+ V+
Sbjct: 210 RHGSCPICRQAVK 222

[Close]

BLAST of CmUC11G216230 vs. ExPASy Swiss-Prot
Match: Q5EAE9 (RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 6.6e-08
Identity = 51/174 (29.31%), Postives = 74/174 (42.53%), Query Frame = 0


Query: 10  SGDPLPHPPPPPKPETQLLSLLLK-VAIMILLTTLFFVFLGLATALLLIHLCVASAVHRR 69
           S  P P PPP P P     S L+  +A++I + T FF      T LLL+++      H +
Sbjct: 33  SDTPPPLPPPSPPPRHNFTSSLMPGIAVVIAVLTAFFSL----TFLLLLYV-----KHCK 92

Query: 70  RRFHRRRAQFPD---------------------SSSGFSNRDLKKLLQFRFSNWVNPHSQ 129
           RR        P                       +SG     ++ L  FRF         
Sbjct: 93  RRNGSVYVNHPQRFAITRYGGGYYNGGGVVGGRKNSGIDRSVIESLPVFRFGALSGHKDG 152

Query: 130 IDCSICLDGFRKGQWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEE 162
           ++C++CL  F   +  R L  C H +H +C+D+WL   S CPLCR   R+D E+
Sbjct: 153 LECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR--YRVDPED 195

[Close]

BLAST of CmUC11G216230 vs. ExPASy TrEMBL
Match: A0A5D3CFV1 (RING-H2 finger protein ATL56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00160 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 165/178 (92.70%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MPFQ SAAVSGDPLPHPPPPPKPETQLLSLLLK+AIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQHSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           VASA+HRRRRFH RR+Q+ DSSSGFS+RDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCR+LGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEE EIDCVSS+N+EL YAL
Sbjct: 121 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 178

[Close]

BLAST of CmUC11G216230 vs. ExPASy TrEMBL
Match: A0A1S3BTK8 (RING-H2 finger protein ATL56 OS=Cucumis melo OX=3656 GN=LOC103493368 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 165/178 (92.70%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MPFQ SAAVSGDPLPHPPPPPKPETQLLSLLLK+AIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQHSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           VASA+HRRRRFH RR+Q+ DSSSGFS+RDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCR+LGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEE EIDCVSS+N+EL YAL
Sbjct: 121 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 178

[Close]

BLAST of CmUC11G216230 vs. ExPASy TrEMBL
Match: A0A0A0LJ61 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047820 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.7e-89
Identity = 163/178 (91.57%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MPFQ SAAVSG PLPHPPPPPKPETQLLSLLLK+AIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           VASA+HRRRRFH R +Q+ DSSSGFS+RDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCR+LGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEE EIDCVSS+N+EL YAL
Sbjct: 176 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 233

[Close]

BLAST of CmUC11G216230 vs. ExPASy TrEMBL
Match: A0A6J1ENH8 (RING-H2 finger protein ATL56-like OS=Cucurbita moschata OX=3662 GN=LOC111436213 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.8e-80
Identity = 150/178 (84.27%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MP QDSAA SGDPLPHPPPPPKPE +LLSLLLKVA+MI  TTLFF+FLGLATALLL HLC
Sbjct: 1   MPLQDSAAGSGDPLPHPPPPPKPEAKLLSLLLKVAVMIFFTTLFFIFLGLATALLLFHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           +ASA+      HRRRAQ+PDSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKG
Sbjct: 61  IASAL------HRRRAQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCRKLGGCGHVYHRKCIDSWLVRVS CPLCRRCVRLDMEE +I+CVS +NYE+LYAL
Sbjct: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSTCPLCRRCVRLDMEEHKINCVSPRNYEILYAL 172

[Close]

BLAST of CmUC11G216230 vs. ExPASy TrEMBL
Match: A0A6J1K548 (RING-H2 finger protein ATL56-like OS=Cucurbita maxima OX=3661 GN=LOC111492378 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78
Identity = 148/178 (83.15%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIHLC 60
           MP QDSAA SG PLPHPPPPPKPE +LLSLLLKV +MI  TTLFFVFLGLATALLL HLC
Sbjct: 1   MPLQDSAAGSGYPLPHPPPPPKPEAKLLSLLLKVTVMIFFTTLFFVFLGLATALLLFHLC 60

Query: 61  VASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120
           +ASA+      HRRRAQ+PDSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKG
Sbjct: 61  IASAL------HRRRAQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKG 120

Query: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEREIDCVSSQNYELLYAL 179
           QWCRKLGGCGHVYHRKCIDSWLVRVS CPLCRRCVRLDMEE +I+CVS +NYE+ YAL
Sbjct: 121 QWCRKLGGCGHVYHRKCIDSWLVRVSTCPLCRRCVRLDMEEHKINCVSPRNYEIFYAL 172

[Close]

BLAST of CmUC11G216230 vs. TAIR 10
Match: AT2G18670.1 (RING/U-box superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 81/170 (47.65%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 1   MPFQDSAAVSGDPLPHPP--PPPKPETQLLSLLLKVAIMILLTTLFFVFLGLATALLLIH 60
           MP  ++  +SG+P    P  PPPKP+T++LSL L   IM  +  LF V +G+A+ L+L  
Sbjct: 1   MPPTNNYRISGEPPSTTPSHPPPKPKTRILSLFLVGVIMFSIFFLFLVLIGIASVLILPL 60

Query: 61  LCVASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSN-WVNPHSQIDCSICLDGF 120
           L   S++HR  R  RRR +  +SS G S+R +KKL QF+FS        + DC +C DGF
Sbjct: 61  L--LSSLHRHHR-RRRRNRRQESSDGLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGF 120

Query: 121 RKGQWCRKLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRL---DMEEREI 165
           R+GQWCR L GCGHV+HRKC+D+WL++ S CP+CR  VRL   D +E E+
Sbjct: 121 RQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARVRLWEEDPQEGEL 167

[Close]

BLAST of CmUC11G216230 vs. TAIR 10
Match: AT4G30370.1 (RING/U-box superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-23
Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 8   AVSGDPLPHPPPP----PKPETQLLSLLLKVAIMILLTTLFFVF----LGLATALLLIHL 67
           ++S +P P PPPP        T++LS  L   IMI +    F+F    LG          
Sbjct: 10  SISREPSPSPPPPKANTKNLPTKILSNFLIGLIMIPVAITAFIFILTSLGFTFFFAFYWF 69

Query: 68  CVASAVHRRRRFHRRRAQFPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRK 127
              +  HR RR HRR     + S G S R +K+L QF++    + +   DC +C+DGFR+
Sbjct: 70  LQRNYRHRLRR-HRRH----EYSDGLSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQ 129

Query: 128 GQWCRKLGGCGHVYHRKCIDSWLVRVSACPLCR 153
           GQWCRKL  CGHV+HRKC+D WL++VS CP+CR
Sbjct: 130 GQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICR 157

[Close]

BLAST of CmUC11G216230 vs. TAIR 10
Match: AT3G20395.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-11
Identity = 28/75 (37.33%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 78  FPDSSSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRKLGGCGHVYHRKC 137
           F     G S   ++ +    F N     ++  CSICL  + +G+  RKL  CGH +H  C
Sbjct: 141 FNHEKKGLSKSSIQNIPM--FYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNC 200

Query: 138 IDSWLVRVSACPLCR 153
           ID WL+R   CP+CR
Sbjct: 201 IDEWLLRQETCPICR 213

[Close]

BLAST of CmUC11G216230 vs. TAIR 10
Match: AT1G74410.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 26/73 (35.62%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 84  GFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRKLGGCGHVYHRKCIDSWLV 143
           G S   L+KL  +  S+ +       C+ICL   + G+  R L  C H +H  C+D WL+
Sbjct: 150 GLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLI 209

Query: 144 RVSACPLCRRCVR 157
           R  +CP+CR+ V+
Sbjct: 210 RHGSCPICRQAVK 222

[Close]

BLAST of CmUC11G216230 vs. TAIR 10
Match: AT5G66070.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 82  SSGFSNRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRKLGGCGHVYHRKCIDSW 141
           S G +   L ++ + R ++  +P   + CS+CL  F+ G+  R L  C H++H  CID W
Sbjct: 150 SKGLTGDSLNRIPKVRITD-TSPEI-VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKW 209

Query: 142 LVRVSACPLCRR 154
           L R ++CPLCRR
Sbjct: 210 LRRHASCPLCRR 219

The following BLAST results are available for this feature:

BLAST of CmUC11G216230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889631.1	9.3e-92	94.94	RING-H2 finger protein ATL56-like [Benincasa hispida]	[more]
XP_008452306.1	2.3e-90	92.70	PREDICTED: RING-H2 finger protein ATL56 [Cucumis melo] >KAA0048646.1 RING-H2 fin...	[more]
XP_004149098.1	5.7e-89	91.57	RING-H2 finger protein ATL56 [Cucumis sativus]	[more]
XP_022929717.1	3.7e-80	84.27	RING-H2 finger protein ATL56-like [Cucurbita moschata]	[more]
XP_023546946.1	4.8e-80	84.83	RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC11G216230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZV51	2.3e-32	47.65	RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1	[more]
Q9M0C3	2.1e-22	41.83	RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1	[more]
Q9FKX5	3.5e-09	38.89	NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV...	[more]
Q8LBA0	3.5e-09	35.62	NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV...	[more]
Q5EAE9	6.6e-08	29.31	RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2	[more]

BLAST of CmUC11G216230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFV1	1.1e-90	92.70	RING-H2 finger protein ATL56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BTK8	1.1e-90	92.70	RING-H2 finger protein ATL56 OS=Cucumis melo OX=3656 GN=LOC103493368 PE=4 SV=1	[more]
A0A0A0LJ61	2.7e-89	91.57	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047820 P...	[more]
A0A6J1ENH8	1.8e-80	84.27	RING-H2 finger protein ATL56-like OS=Cucurbita moschata OX=3662 GN=LOC111436213 ...	[more]
A0A6J1K548	1.3e-78	83.15	RING-H2 finger protein ATL56-like OS=Cucurbita maxima OX=3661 GN=LOC111492378 PE...	[more]

BLAST of CmUC11G216230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18670.1	1.6e-33	47.65	RING/U-box superfamily protein	[more]
AT4G30370.1	1.5e-23	41.83	RING/U-box superfamily protein	[more]
AT3G20395.1	5.0e-11	37.33	RING/U-box superfamily protein	[more]
AT1G74410.1	2.5e-10	35.62	RING/U-box superfamily protein	[more]
AT5G66070.1	2.5e-10	38.89	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 110..151 e-value: 5.5E-7 score: 39.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 109..152 e-value: 2.7E-12 score: 46.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 110..152 score: 12.282736
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 85..161 e-value: 1.8E-18 score: 67.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR46539	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 4..177
None	No IPR available	PANTHER	PTHR46539:SF9	RING-H2 FINGER PROTEIN ATL56	coord: 4..177
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 90..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G216230.1	CmUC11G216230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane