CmUC11G211200 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G211200
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr11: 7714737 .. 7715314 (-)
RNA-Seq Expression	CmUC11G211200
Synteny	CmUC11G211200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCGCCAGCGATTATGATTTCAGTTACGACGACAAGGCTCTCTTTGAGAAGACCTACTGCTACTCCGCATACGAGGCTTTTGGTGTGCCTTCTCCTCTTAGGGGGGATCCTGGAAACTAGTTCCCAGTTTGGATAAGAGACGAGATTGAGAAATTCTAGTCGTCGGCCGCCGAGCGACAAGAACAAGCAGGAGTCGTCCTATCTGCCTAGAAAGATTCTCGAAGACTTTCTACTATTATCAAAATCAAGCCCCAGCCAACTTGACTTATTTAAAACCCCCAATCGGTATGAGATACCCGGAATGGGGGGTACTGGCATAGACACCTTACTCCTCGCCTTTTAGTAAACCTTCTAATCGGAGAGGCCAGACGCCAAAGCAAAAGAACTTGTGGAGTTGGAATCAAACTAAAGGGATCCCGCTTAGTGACGTGGACAAACTGACCCAGTTGCTTCTTTTTCGGCCAAATCCGAATTTCGTTTTGCTTTTCCCGGTCGTCGAGCCTGATCGACTCGACTCTTTTCTCTGCCTCCCGGCCTCTCACTTCGTTTCGTTCTTCTTCTGTATCGTCGCTTGA

mRNA sequence

ATGCGCGCCAGCGATTATGATTTCAGTTACGACGACAAGGCTCTCTTTGAGAAGACCTACTGCTACTCCGCATACGAGGCTTTTGAGACGAGATTGAGAAATTCTAGTCGTCGGCCGCCGAGCGACAAGAACAAGCAGGAGTCGTCCTATCTGCCTAGAAAGATTCTCGAAGACTTTCTACTATTATCAAAATCAAGCCCCAGCCAACTTGACTTATTTAAAACCCCCAATCGGTATGAGATACCCGGAATGGGGACACCTTACTCCTCGCCTTTTAGTAAACCTTCTAATCGGAGAGGCCAGACGCCAAAGCAAAAGAACTTGTGGAGTTGGAATCAAACTAAAGGGATCCCGCTTAGTGACGTGGACAAACTGACCCAGTTGCTTCTTTTTCGGCCAAATCCGAATTTCGTTTTGCTTTTCCCGGTCGTCGAGCCTGATCGACTCGACTCTTTTCTCTGCCTCCCGGCCTCTCACTTCGTTTCGTTCTTCTTCTGTATCGTCGCTTGA

Coding sequence (CDS)

ATGCGCGCCAGCGATTATGATTTCAGTTACGACGACAAGGCTCTCTTTGAGAAGACCTACTGCTACTCCGCATACGAGGCTTTTGAGACGAGATTGAGAAATTCTAGTCGTCGGCCGCCGAGCGACAAGAACAAGCAGGAGTCGTCCTATCTGCCTAGAAAGATTCTCGAAGACTTTCTACTATTATCAAAATCAAGCCCCAGCCAACTTGACTTATTTAAAACCCCCAATCGGTATGAGATACCCGGAATGGGGACACCTTACTCCTCGCCTTTTAGTAAACCTTCTAATCGGAGAGGCCAGACGCCAAAGCAAAAGAACTTGTGGAGTTGGAATCAAACTAAAGGGATCCCGCTTAGTGACGTGGACAAACTGACCCAGTTGCTTCTTTTTCGGCCAAATCCGAATTTCGTTTTGCTTTTCCCGGTCGTCGAGCCTGATCGACTCGACTCTTTTCTCTGCCTCCCGGCCTCTCACTTCGTTTCGTTCTTCTTCTGTATCGTCGCTTGA

Protein sequence

MRASDYDFSYDDKALFEKTYCYSAYEAFETRLRNSSRRPPSDKNKQESSYLPRKILEDFLLLSKSSPSQLDLFKTPNRYEIPGMGTPYSSPFSKPSNRRGQTPKQKNLWSWNQTKGIPLSDVDKLTQLLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA

Homology

[Close]

BLAST of CmUC11G211200 vs. NCBI nr
Match: YP_009430396.1 (orf107 [Bupleurum falcatum] >ARR27528.1 orf107 [Bupleurum falcatum])

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-12
Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           LLLFRPNPNFVLL PVVEPDRLDSF C PASHFVSFFFCIVA
Sbjct: 6   LLLFRPNPNFVLLLPVVEPDRLDSFPCPPASHFVSFFFCIVA 47

[Close]

BLAST of CmUC11G211200 vs. NCBI nr
Match: RDY14266.1 (hypothetical protein CR513_00680, partial [Mucuna pruriens])

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-12
Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           LLLFRPNPNFVLL PVVEPDRLDSF C PASHFVSFFFCIVA
Sbjct: 6   LLLFRPNPNFVLLLPVVEPDRLDSFPCPPASHFVSFFFCIVA 47

[Close]

BLAST of CmUC11G211200 vs. NCBI nr
Match: AGC78895.1 (hypothetical protein [Vicia faba] >AGC79008.1 hypothetical protein [Vicia faba])

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-10
Identity = 37/42 (88.10%), Postives = 38/42 (90.48%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           LLLFRPNPNFVLL PVVEPDRLDSF C PASHFVSFFF +VA
Sbjct: 6   LLLFRPNPNFVLLLPVVEPDRLDSFPCPPASHFVSFFFFLVA 47

[Close]

BLAST of CmUC11G211200 vs. NCBI nr
Match: PNX98413.1 (hypothetical protein L195_g021660 [Trifolium pratense])

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-09
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           LLLFRPNPNFVLL PVVEPDRLDSF   PASHFVSFFF +VA
Sbjct: 6   LLLFRPNPNFVLLLPVVEPDRLDSFPSPPASHFVSFFFFLVA 47

[Close]

BLAST of CmUC11G211200 vs. NCBI nr
Match: PKU82546.1 (hypothetical protein MA16_Dca020109 [Dendrobium catenatum])

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-09
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           L LFRPNP+FVLL PVVEPD+LDSF C PASHFVSFF C VA
Sbjct: 51  LHLFRPNPDFVLLLPVVEPDQLDSFPCPPASHFVSFFLCTVA 92

[Close]

BLAST of CmUC11G211200 vs. ExPASy TrEMBL
Match: A0A371IGQ8 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00680 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.0e-12
Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           LLLFRPNPNFVLL PVVEPDRLDSF C PASHFVSFFFCIVA
Sbjct: 6   LLLFRPNPNFVLLLPVVEPDRLDSFPCPPASHFVSFFFCIVA 47

[Close]

BLAST of CmUC11G211200 vs. ExPASy TrEMBL
Match: A0A288W740 (Orf107 OS=Bupleurum falcatum OX=46367 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.0e-12
Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           LLLFRPNPNFVLL PVVEPDRLDSF C PASHFVSFFFCIVA
Sbjct: 6   LLLFRPNPNFVLLLPVVEPDRLDSFPCPPASHFVSFFFCIVA 47

[Close]

BLAST of CmUC11G211200 vs. ExPASy TrEMBL
Match: R4ITV7 (Uncharacterized protein OS=Vicia faba OX=3906 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.3e-11
Identity = 37/42 (88.10%), Postives = 38/42 (90.48%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           LLLFRPNPNFVLL PVVEPDRLDSF C PASHFVSFFF +VA
Sbjct: 6   LLLFRPNPNFVLLLPVVEPDRLDSFPCPPASHFVSFFFFLVA 47

[Close]

BLAST of CmUC11G211200 vs. ExPASy TrEMBL
Match: A0A2K3N5T8 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g021660 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.1e-10
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           LLLFRPNPNFVLL PVVEPDRLDSF   PASHFVSFFF +VA
Sbjct: 6   LLLFRPNPNFVLLLPVVEPDRLDSFPSPPASHFVSFFFFLVA 47

[Close]

BLAST of CmUC11G211200 vs. ExPASy TrEMBL
Match: A0A2I0X3R0 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca020109 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.7e-09
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 128 LLLFRPNPNFVLLFPVVEPDRLDSFLCLPASHFVSFFFCIVA 170
           L LFRPNP+FVLL PVVEPD+LDSF C PASHFVSFF C VA
Sbjct: 51  LHLFRPNPDFVLLLPVVEPDQLDSFPCPPASHFVSFFLCTVA 92

The following BLAST results are available for this feature:

BLAST of CmUC11G211200 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009430396.1	4.1e-12	92.86	orf107 [Bupleurum falcatum] >ARR27528.1 orf107 [Bupleurum falcatum]	[more]
RDY14266.1	4.1e-12	92.86	hypothetical protein CR513_00680, partial [Mucuna pruriens]	[more]
AGC78895.1	1.3e-10	88.10	hypothetical protein [Vicia faba] >AGC79008.1 hypothetical protein [Vicia faba]	[more]
PNX98413.1	1.9e-09	85.71	hypothetical protein L195_g021660 [Trifolium pratense]	[more]
PKU82546.1	5.5e-09	80.95	hypothetical protein MA16_Dca020109 [Dendrobium catenatum]	[more]

BLAST of CmUC11G211200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC11G211200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A371IGQ8	2.0e-12	92.86	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00680 P...	[more]
A0A288W740	2.0e-12	92.86	Orf107 OS=Bupleurum falcatum OX=46367 PE=4 SV=1	[more]
R4ITV7	6.3e-11	88.10	Uncharacterized protein OS=Vicia faba OX=3906 PE=4 SV=1	[more]
A0A2K3N5T8	9.1e-10	85.71	Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g021660 PE=4 SV=1	[more]
A0A2I0X3R0	2.7e-09	80.95	Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca020109 PE=4...	[more]

BLAST of CmUC11G211200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G211200.1	CmUC11G211200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion