CmUC11G210320 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G210320
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr11: 6912668 .. 6915964 (+)
RNA-Seq Expression	CmUC11G210320
Synteny	CmUC11G210320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGATCCTACTCAGACTTCAGATCCAACGCGTTGCCTACCACAATTGTTGAATCTGCCAGTTGCAAATTCAACAGAATTGCAATCGAATTCACTCGATTTGCAATTGAATCCATATCTTCTACATCACTCCTTTGCTCCGACTTCTTGTTCTTGTTTCTTAATTAATGAGAAAATCAGTGAGAGTATTCTCTCTCTCTTTATTTCATTGGTTGTTATACTAAACTTACCTGGCAGTAGACAATGAATGTTGAAATTGTTGTTCTCCTTCCAAATTAAATCTGGAGATCTGTTTCCCCTTCCCCTCATGGATCCTACAACGTTATCAATAAATGAAGGTAGATGCTTCCAGTTCTAAAATTAGACCACTTACAATTTGTTTAATTCACATTGAGGCACGAAGATACCTCCAGTTCTGTGATTAGACCACTTACAATTTGTTTGATTCACATTGAGGCATGAAGATGCCTTCAGTTCTTTGATTAAACCATTTAGACTTGGTTTGATTCTCATTGGGGGGGTACCTCTATCAATTAGGTACCTATAAGGTTTTTCTTCATGGAACTCTTCAAAATGATGTTTATATGCATCAATCTCTAAGTTATCAAGAGCCGTCCAAGCCACACAACATGGTACTAAGTGGCCTGGTAATTAAGAGGTTTTGCTGTCACAATATCAAACATTTACAGTAATTACTTAAACTTCTGTTTGCTCATTTATTGATATGTTATAGTCTTCTATGAATTCTGAAAGATGGTGTAATCCTTCTTTCTCCTCAAATGACACAATCTTGGTGGTACCACTGGGCAAAGATTAAGCAAGCCTATTCCCATCCCCGTTCAAAGATTAGGTGAGGTTGGTACGAAGTAATCTTCAGAAACAGAAACTAACTACAGTTTTTGGTTGACCATATTGCCTACCTGAAACTTGACATGGACTTTGACTGAATCCAAACTAAGTTCATAGGTGGACTGGGTAATTAGATTTCAAATTTAAAATATCACTTTTGGTGCTAACTTTTACTTAGATTTTTCACAGAACCAGTTTTGAAACATACAAATGCAAAAAGTTCCCTCAATATTCCATGAGTACTACAACTATTTATCTCTTGAAACTTTATAAAATTAGCTCAAAATAGGAGTTTGTAGAATACTAGAAAGATAAACAAATAGCAAAAGAACAAACACGGCAGAGACAGAAGGCAAAGCAAATTAGGCTACAACCGCTAGCAATGTATTATAACGCACATGAATGTAGCTGCAGCAGAAACTAGTAACCAGAAAATACATTCTACAGCCCCTGCCAATGTAATTTGTACACCTAAAAGCTAAGAAAGCAACATAAATAATGTGTTCTTTCTTGTAAATGAAACAACCGCATTCATTGAAAATAAATGAAAAAATACAAAATGCTAAGCCCACAAAAACCAACTATCCAATTAAGTAAAATGTTACCTATAGAATGATTACAAAAATCTCCAAGCCCAAAGAGAAATATGAAAGCTCATCAAGAACCAAACATCAGGGCCCTCTCCATTCCTCTAAAAACTCTTCACTTCTCTCACCCTAAAGATCCCATAACAAAGTACGCACCCTATCAAACCATAAATAACGTCATAGCAACAAGCAAAGATGAACGTGGGAGACACACAAACTAGTCAATTGCAGCAGCAAGTTGAAACCAGAAACTTACATTAAACTATTCACCAAGAAATTAACATTAGAAAAAAGGAAGGAAAAAAAAAAAAGAAAACACCTTAAGCCCTCTGTTTGGAAATCTCGGATTTGGAAGGATATCAAATCACAATGGATTTGAAAACATTTCTGGTGTAGATTTCAAATCAAAATAGATTTGAGATCATTTTCGCTTGTTTGGTTTGAATAAAAAATATGTGATTTGAACTTCAATCTGATTTGAAATCACATTTTGTCCCAAAAAATTTCCTCCCAAAATAGGTGGGATTTGGCAAGATTTTAGATCAAATTCGACTGCAATCCAATTTTACCCTGTTCTGGAATTGATTGAACTGAAGGGGGAAACAAAGGATCTTAGAGAACTCACATACGAGCAACTTGAGGGTTGCGAAAAAGCGGAGTGGGGGGTCACCGACAGTAATAGAATACGGGAGCAACGGGCAGCGTTCAGCGCAGAAGAGAGTGAGAGAAGAAAGAAGAAAGTGGTAGATGCGGGCGGCGTGCGGCTATGTCAGAGAGGATGTGCCGGCGGAGAGGGGTCGCAGTTGGAAGATAAGGGAGGAAAAGTGGAATGGCTGCTAAAGCCTAACGATGCGGGCAGTACTGCGGTGAGAGGGGAAAGAAAGAAAAGGGTGGGGAAAGTGAAGATCGGATCGGGATCGTGGGTGATACGAACACGGTTAAATTGCAAATTTAATCTCTATAAATTAGAAAAGTTTAAAATATAGTACTTGTAATTTATAATTAGAACTCTTATAATTTAATATTTTTCTTCCTCTATTTATTGAAGTCATCCATGAGCCACAACCCTTCTTTTGTTTGAAGAGCATTATGGGTCGTAGCTTGTTTCAAAGGGAATTAGAAGATGGATGAATACGATTAAGGACACCTTGTTTTTTCTTCCTGAGTGGCTTCTGAGGGAGTGGCCTTTCAAACTAGTCACCCTTTTCCTCGGGAGGTTGAGCCTTTACATGTGAGTGATCACATCATGGAAGAGGGAGCTTGGAATAAGCCTAAGATGGAGAGGGTCTTGTGGGAGGAGGATAGACGAATTATTCAATCAATTCCAATTATACAAACTCTAGTTCCTCATTCTTGGTGTTGGCAATATTCAAGGATTGGCTCTTTCACCACAAAAAGTGCTTACAAACTCTACATTTTTGCTAATTTGGAGGCTTTCTCCTCTTCTTTGGGTATGCATGAGGTTTGGTGGAAACAGGTGTGGGGCTCTTCTCTTTCATCGAAGATCAAAATTTTCTTTGACGTGTTTATAATCATATTCTACCTACATCCCAAAATCTTGTTTATAGAAAATTGTCTCTCATGGTGAATGAATGTGTTGTGCTAAGGAAGTAGAATCTGAAACCCATGCTTTATTTCTATGTAAAAGGGTTAGAAATGTTTGGATCGGGACCTTCCCTTCCATTATGGAGTTGGTAGATCTTTATTTATCTTTGCATGATATGTTGTCCCTTGTTGCTGACAAACTCAATACTAATGGTTGCTTACTTTTTGGTGTCTCTTGTTGGGCGATTTGGGAGGACAGAAACCAGATGCTTCATAGAATTAAGGTCGATAGCCCCTTTGCATTCCAAGTTTGA

mRNA sequence

ATGCAAGATCCTACTCAGACTTCAGATCCAACGCGTTGCCTACCACAATTGTTGAATCTGCCAGTTGCAAATTCAACAGAATTGCAATCGAATTCACTCGATTTGCAATTGAATCCATATCTTCTACATCACTCCTTTGCTCCGACTTCTTGTTCTTGTTTCTTAATTAATGAGAAAATCAGTACCTATAAGGTTTTTCTTCATGGAACTCTTCAAAATGATGTTTATATGCATCAATCTCTAAGTTATCAAGAGCCGTCCAAGCCACACAACATGGTACTAAGTGGCCTGGGGGAAACAAAGGATCTTAGAGAACTCACATACGAGCAACTTGAGGGTTGCGAAAAAGCGGAGTGGGGGGTCACCGACAGTAATAGAATACGGGAGCAACGGGCAGCGTTCAGCGCAGAAGAGAGTGAGAGAAGAAAGAAGAAAGTGGTAGATGCGGGCGGCGTGCGGCTATGTCAGAGAGGATGTGCCGGCGGAGAGGGGTCGCAGTTGGAAGATAAGGGAGGAAAAGTGGAATGGCTGCTAAAGCCTAACGATGCGGGCAGTACTGCGGAAGTAGAATCTGAAACCCATGCTTTATTTCTATGTAAAAGGGTTAGAAATGTTTGGATCGGGACCTTCCCTTCCATTATGGAGTTGGTAGATCTTTATTTATCTTTGCATGATATGTTGTCCCTTGTTGCTGACAAACTCAATACTAATGGTTGCTTACTTTTTGGTGTCTCTTGTTGGGCGATTTGGGAGGACAGAAACCAGATGCTTCATAGAATTAAGGTCGATAGCCCCTTTGCATTCCAAGTTTGA

Coding sequence (CDS)

ATGCAAGATCCTACTCAGACTTCAGATCCAACGCGTTGCCTACCACAATTGTTGAATCTGCCAGTTGCAAATTCAACAGAATTGCAATCGAATTCACTCGATTTGCAATTGAATCCATATCTTCTACATCACTCCTTTGCTCCGACTTCTTGTTCTTGTTTCTTAATTAATGAGAAAATCAGTACCTATAAGGTTTTTCTTCATGGAACTCTTCAAAATGATGTTTATATGCATCAATCTCTAAGTTATCAAGAGCCGTCCAAGCCACACAACATGGTACTAAGTGGCCTGGGGGAAACAAAGGATCTTAGAGAACTCACATACGAGCAACTTGAGGGTTGCGAAAAAGCGGAGTGGGGGGTCACCGACAGTAATAGAATACGGGAGCAACGGGCAGCGTTCAGCGCAGAAGAGAGTGAGAGAAGAAAGAAGAAAGTGGTAGATGCGGGCGGCGTGCGGCTATGTCAGAGAGGATGTGCCGGCGGAGAGGGGTCGCAGTTGGAAGATAAGGGAGGAAAAGTGGAATGGCTGCTAAAGCCTAACGATGCGGGCAGTACTGCGGAAGTAGAATCTGAAACCCATGCTTTATTTCTATGTAAAAGGGTTAGAAATGTTTGGATCGGGACCTTCCCTTCCATTATGGAGTTGGTAGATCTTTATTTATCTTTGCATGATATGTTGTCCCTTGTTGCTGACAAACTCAATACTAATGGTTGCTTACTTTTTGGTGTCTCTTGTTGGGCGATTTGGGAGGACAGAAACCAGATGCTTCATAGAATTAAGGTCGATAGCCCCTTTGCATTCCAAGTTTGA

Protein sequence

MQDPTQTSDPTRCLPQLLNLPVANSTELQSNSLDLQLNPYLLHHSFAPTSCSCFLINEKISTYKVFLHGTLQNDVYMHQSLSYQEPSKPHNMVLSGLGETKDLRELTYEQLEGCEKAEWGVTDSNRIREQRAAFSAEESERRKKKVVDAGGVRLCQRGCAGGEGSQLEDKGGKVEWLLKPNDAGSTAEVESETHALFLCKRVRNVWIGTFPSIMELVDLYLSLHDMLSLVADKLNTNGCLLFGVSCWAIWEDRNQMLHRIKVDSPFAFQV

Homology

[Close]

BLAST of CmUC11G210320 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia])

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-04
Identity = 29/75 (38.67%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 180 PNDAGSTAEVESETHALFLCKRVRNVWIGTFPSIMELVDLYLSLHDMLSLVADKLNTNGC 239
           PN      ++E+  HALF CKR + VW    P      D   S+ D L  + + L+T   
Sbjct: 26  PNCLVCGKQIETTDHALFKCKRAKEVWNILLPQAFPQCDFNNSVQDGLLYLVESLSTPDF 85

Query: 240 LLFGVSCWAIWEDRN 255
            L GV  WAIW DRN
Sbjct: 86  DLVGVGVWAIWNDRN 100

[Close]

BLAST of CmUC11G210320 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-04
Identity = 29/78 (37.18%), Postives = 41/78 (52.56%), Query Frame = 0


Query: 189 VESETHALFLCKRVRNVWIGTFPSIM-ELVDLYLSLHDMLSLVADKLNTNGCLLFGVSCW 248
           +E  +H + LCKR + +W   FPS+    ++  LS  D+  L+ DKLN     L   + W
Sbjct: 1   MEXTSHXIXLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXW 60

Query: 249 AIWEDRNQMLHRIKVDSP 266
           AIW DRN   H   V +P
Sbjct: 61  AIWCDRNSXAHGSSVSTP 78

[Close]

BLAST of CmUC11G210320 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-05
Identity = 29/75 (38.67%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 180 PNDAGSTAEVESETHALFLCKRVRNVWIGTFPSIMELVDLYLSLHDMLSLVADKLNTNGC 239
           PN      ++E+  HALF CKR + VW    P      D   S+ D L  + + L+T   
Sbjct: 26  PNCLVCGKQIETTDHALFKCKRAKEVWNILLPQAFPQCDFNNSVQDGLLYLVESLSTPDF 85

Query: 240 LLFGVSCWAIWEDRN 255
            L GV  WAIW DRN
Sbjct: 86  DLVGVGVWAIWNDRN 100

[Close]

BLAST of CmUC11G210320 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-04
Identity = 29/78 (37.18%), Postives = 41/78 (52.56%), Query Frame = 0


Query: 189 VESETHALFLCKRVRNVWIGTFPSIM-ELVDLYLSLHDMLSLVADKLNTNGCLLFGVSCW 248
           +E  +H + LCKR + +W   FPS+    ++  LS  D+  L+ DKLN     L   + W
Sbjct: 1   MEXTSHXIXLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXW 60

Query: 249 AIWEDRNQMLHRIKVDSP 266
           AIW DRN   H   V +P
Sbjct: 61  AIWCDRNSXAHGSSVSTP 78

[Close]

BLAST of CmUC11G210320 vs. ExPASy TrEMBL
Match: A0A803P9P5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-04
Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 189 VESETHALFLCKRVRNVWIGTFPSIMELVDLYLSLHDMLSLVADKLNTNGCLLFGVSCWA 248
           +ES THALF CKR R +W  +  SI + V   +SL D+L  ++   ++     F    W+
Sbjct: 566 IESTTHALFWCKRPRKIWQLSSFSISDFVTHNMSLMDVLQNMSQIWSSKQIEQFACILWS 625

Query: 249 IWEDRNQMLHRIKVDSP 266
           IW +RN+  H  K   P
Sbjct: 626 IWNERNKERHGSKTKPP 642

[Close]

BLAST of CmUC11G210320 vs. ExPASy TrEMBL
Match: A0A803Q027 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.0e-04
Identity = 25/81 (30.86%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 181 NDAGSTAEVESETHALFLCKRVRNVWIGTFPSIMELVDLYLSLHDMLSLVADKLNTNGCL 240
           N +    + ES THALF CKR R VW  +   + +++  ++SL++++  +A   +++   
Sbjct: 855 NSSICNRDKESITHALFFCKRARQVWQLSAFGLDKIISPHMSLNEIILHLAATWSSSKLE 914

Query: 241 LFGVSCWAIWEDRNQMLHRIK 262
            F    W+IW +RN+ +H  K
Sbjct: 915 QFATLLWSIWNERNREIHGSK 935

The following BLAST results are available for this feature:

BLAST of CmUC11G210320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145060.1	1.3e-04	38.67	uncharacterized protein LOC111014578 [Momordica charantia]	[more]
XP_022131661.1	3.8e-04	37.18	uncharacterized protein LOC111004786 [Momordica charantia]	[more]

BLAST of CmUC11G210320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC11G210320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTE3	6.4e-05	38.67	uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1BQ49	1.8e-04	37.18	uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A803P9P5	1.8e-04	36.36	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803Q027	7.0e-04	30.86	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of CmUC11G210320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G210320.1	CmUC11G210320.1	mRNA