CmUC11G210310 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G210310
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr11: 6910538 .. 6911036 (+)
RNA-Seq Expression	CmUC11G210310
Synteny	CmUC11G210310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTCCCCACAAATTCCGAAGTTAAAGCAGCCATCGTTACATTACAATAGAGAAAACAAGAATGATATGGTAGATATATTTTTCCAGAGTTCATCACCTCAGCAGAGCTCATCATCCAGATACTAACTTTACAAAGATACAGATTGCATTTAGCATTATGAGAGGAACTCTTAAATATTGTGTTGCGTAGATAAGGCCAATAAGCTGCCCCTTGAAGGACTTTGTTCTGCCTCCTGAGAATTCAGAGAAGTTCAATCCTCGAGGAGCAAGAAAGCGATCTTCATTCAGAATTGCCAGCGCGTTAGCAAGAAGCAGACAACCCTCTAGTAGTGTCCACAGACCCATTTACCTCGGCTACTTGAAACACACTTCAGAGGGTTTTGACTCTAGGGATTCCTTTGTACTGGAAGTGTTCTTGTCTGCTCTCTGCTGTGTTTTGATCATAGAAGATAAGGGATTGTGTCAAGAATGTTGTAAAGAAGGATTAAGGGCATGA

mRNA sequence

ATGCGTTCCCCACAAATTCCGAAGTTAAAGCAGCCATCGTTACATTACAATAGAGAAAACAAGAATGATATGATAAGGCCAATAAGCTGCCCCTTGAAGGACTTTGTTCTGCCTCCTGAGAATTCAGAGAAGTTCAATCCTCGAGGAGCAAGAAAGCGATCTTCATTCAGAATTGCCAGCGCGTTAGCAAGAAGCAGACAACCCTCTAGTAGTGTCCACAGACCCATTTACCTCGGCTACTTGAAACACACTTCAGAGGGTTTTGACTCTAGGGATTCCTTTGTACTGGAAGTGTTCTTGTCTGCTCTCTGCTGTGTTTTGATCATAGAAGATAAGGGATTGTGTCAAGAATGTTGTAAAGAAGGATTAAGGGCATGA

Coding sequence (CDS)

ATGCGTTCCCCACAAATTCCGAAGTTAAAGCAGCCATCGTTACATTACAATAGAGAAAACAAGAATGATATGATAAGGCCAATAAGCTGCCCCTTGAAGGACTTTGTTCTGCCTCCTGAGAATTCAGAGAAGTTCAATCCTCGAGGAGCAAGAAAGCGATCTTCATTCAGAATTGCCAGCGCGTTAGCAAGAAGCAGACAACCCTCTAGTAGTGTCCACAGACCCATTTACCTCGGCTACTTGAAACACACTTCAGAGGGTTTTGACTCTAGGGATTCCTTTGTACTGGAAGTGTTCTTGTCTGCTCTCTGCTGTGTTTTGATCATAGAAGATAAGGGATTGTGTCAAGAATGTTGTAAAGAAGGATTAAGGGCATGA

Protein sequence

MRSPQIPKLKQPSLHYNRENKNDMIRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPIYLGYLKHTSEGFDSRDSFVLEVFLSALCCVLIIEDKGLCQECCKEGLRA

Homology

[Close]

BLAST of CmUC11G210310 vs. NCBI nr
Match: KAG7033319.1 (L-type lectin-domain containing receptor kinase S.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-12
Identity = 41/55 (74.55%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 23  DMIRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPIY 78
           + I PISCPL D VLPPE SEK +P GAR RSSFRIA ALA SRQPS SVH PIY
Sbjct: 163 EKISPISCPLNDLVLPPEKSEKLHPLGARNRSSFRIARALASSRQPSRSVHNPIY 217

[Close]

BLAST of CmUC11G210310 vs. NCBI nr
Match: KAG6763733.1 (hypothetical protein POTOM_031172 [Populus tomentosa])

HSP 1 Score: 80.9 bits (198), Expect = 8.7e-12
Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPI 77
          +RPISCP KDFV P ENSEK +P GARKRSSF IA+A ARSR PS++VH+PI
Sbjct: 1  MRPISCPFKDFVRPTENSEKLHPLGARKRSSFNIANAFARSRNPSNNVHKPI 52

[Close]

BLAST of CmUC11G210310 vs. NCBI nr
Match: KAF5742451.1 (hypothetical protein HS088_TW09G00499 [Tripterygium wilfordii])

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-11
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPI 77
          +RPISCP  DFVLPPENS K  P GAR RSSF IA+A A SR PSSSVH+PI
Sbjct: 19 MRPISCPFNDFVLPPENSWKLQPFGARNRSSFNIANAFASSRNPSSSVHKPI 70

[Close]

BLAST of CmUC11G210310 vs. NCBI nr
Match: KAB5544326.1 (hypothetical protein DKX38_012438 [Salix brachista])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPI 77
          +RPISCP  DFV P ENSEK +P GARKRSSF IA+A A SR PS++VH+PI
Sbjct: 1  MRPISCPFTDFVRPTENSEKLHPLGARKRSSFNIANAFASSRNPSNNVHKPI 52

[Close]

BLAST of CmUC11G210310 vs. NCBI nr
Match: ACU14371.1 (unknown, partial [Glycine max])

HSP 1 Score: 74.3 bits (181), Expect = 8.2e-10
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPIYL 79
          +RPIS PL D VLPPE S K +P GARKRSSF IASA AR R PSS VHRPI L
Sbjct: 1  MRPISWPLNDLVLPPEKSWKPHPLGARKRSSFNIASAFARRRNPSSKVHRPISL 54

[Close]

BLAST of CmUC11G210310 vs. ExPASy TrEMBL
Match: A0A6M2EQ11 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.2e-12
Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPI 77
          +RPISCP KDFV P ENSEK +P GARKRSSF IA+A ARSR PS++VH+PI
Sbjct: 1  MRPISCPFKDFVRPTENSEKLHPLGARKRSSFNIANAFARSRNPSNNVHKPI 52

[Close]

BLAST of CmUC11G210310 vs. ExPASy TrEMBL
Match: A0A7J7D808 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW09G00499 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPI 77
          +RPISCP  DFVLPPENS K  P GAR RSSF IA+A A SR PSSSVH+PI
Sbjct: 19 MRPISCPFNDFVLPPENSWKLQPFGARNRSSFNIANAFASSRNPSSSVHKPI 70

[Close]

BLAST of CmUC11G210310 vs. ExPASy TrEMBL
Match: A0A5N5LQU8 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_012438 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPI 77
          +RPISCP  DFV P ENSEK +P GARKRSSF IA+A A SR PS++VH+PI
Sbjct: 1  MRPISCPFTDFVRPTENSEKLHPLGARKRSSFNIANAFASSRNPSNNVHKPI 52

[Close]

BLAST of CmUC11G210310 vs. ExPASy TrEMBL
Match: C6SYP8 (Uncharacterized protein (Fragment) OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.0e-10
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPIYL 79
          +RPIS PL D VLPPE S K +P GARKRSSF IASA AR R PSS VHRPI L
Sbjct: 1  MRPISWPLNDLVLPPEKSWKPHPLGARKRSSFNIASAFARRRNPSSKVHRPISL 54

[Close]

BLAST of CmUC11G210310 vs. ExPASy TrEMBL
Match: C6T5P5 (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.8e-10
Identity = 38/54 (70.37%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 25 IRPISCPLKDFVLPPENSEKFNPRGARKRSSFRIASALARSRQPSSSVHRPIYL 79
          +RPIS PLKDFV P E S+K +P G RKRSSF IASA ARSR PSS VH PI L
Sbjct: 1  MRPISWPLKDFVCPAEKSDKPHPLGVRKRSSFSIASAFARSRNPSSKVHNPISL 54

The following BLAST results are available for this feature:

BLAST of CmUC11G210310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033319.1	1.8e-12	74.55	L-type lectin-domain containing receptor kinase S.4, partial [Cucurbita argyrosp...	[more]
KAG6763733.1	8.7e-12	73.08	hypothetical protein POTOM_031172 [Populus tomentosa]	[more]
KAF5742451.1	4.3e-11	73.08	hypothetical protein HS088_TW09G00499 [Tripterygium wilfordii]	[more]
KAB5544326.1	2.2e-10	69.23	hypothetical protein DKX38_012438 [Salix brachista]	[more]
ACU14371.1	8.2e-10	72.22	unknown, partial [Glycine max]	[more]

BLAST of CmUC11G210310 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC11G210310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M2EQ11	4.2e-12	73.08	Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1	[more]
A0A7J7D808	2.1e-11	73.08	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW09G00499 ...	[more]
A0A5N5LQU8	1.0e-10	69.23	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_012438 PE=4 SV=1	[more]
C6SYP8	4.0e-10	72.22	Uncharacterized protein (Fragment) OS=Glycine max OX=3847 PE=2 SV=1	[more]
C6T5P5	6.8e-10	70.37	Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmUC11G210310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G210310.1	CmUC11G210310.1	mRNA