
CmUC11G209580 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAACTCCAAACTATGACCAAATCTCTCAAAAATCCTTCCAAACCAAACATGAAGATAGATTATTCACTAGGGCTCTATCCAAAGAGCTCAATTCCACCATCAACTCCTCTTTTAGAGTCTATTACGGCGGAGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCAGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCACTTTGCATTCTGCTTCCAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCCATTTTTCCTCGGCTCACGCCAAGGAAATCTCGAACCTCCCCGTCTTTCTCCTCTTCCTCGGGCTCCTCCTCCTCCTCCTCTTCTTTAGCATCGTGGCCATCTTCTCGCTCATCGTCCTCCTCGTCTCCCTCGGCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCATTTCTCAGATTCTCCAAGCTTACCATTCGAGCATAGCTTCGACGATAACAACGACGGAGACGAGGTGGTGGCTGGGAGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTTCTTCAAGTAGAGCTTCATTGTTTGGAGGTTGTTACCAGTTAGTGAATGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGCAGAGGTACTCTTAATAATTAG ATGCAAACTCCAAACTATGACCAAATCTCTCAAAAATCCTTCCAAACCAAACATGAAGATAGATTATTCACTAGGGCTCTATCCAAAGAGCTCAATTCCACCATCAACTCCTCTTTTAGAGTCTATTACGGCGGAGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCAGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCACTTTGCATTCTGCTTCCAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCCATTTTTCCTCGGCTCACGCCAAGGAAATCTCGAACCTCCCCGTCTTTCTCCTCTTCCTCGGGCTCCTCCTCCTCCTCCTCTTCTTTAGCATCGTGGCCATCTTCTCGCTCATCGTCCTCCTCGTCTCCCTCGGCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCATTTCTCAGATTCTCCAAGCTTACCATTCGAGCATAGCTTCGACGATAACAACGACGGAGACGAGGTGGTGGCTGGGAGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTTCTTCAAGTAGAGCTTCATTGTTTGGAGGTTGTTACCAGTTAGTGAATGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGCAGAGGTACTCTTAATAATTAG ATGCAAACTCCAAACTATGACCAAATCTCTCAAAAATCCTTCCAAACCAAACATGAAGATAGATTATTCACTAGGGCTCTATCCAAAGAGCTCAATTCCACCATCAACTCCTCTTTTAGAGTCTATTACGGCGGAGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCAGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCACTTTGCATTCTGCTTCCAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCCATTTTTCCTCGGCTCACGCCAAGGAAATCTCGAACCTCCCCGTCTTTCTCCTCTTCCTCGGGCTCCTCCTCCTCCTCCTCTTCTTTAGCATCGTGGCCATCTTCTCGCTCATCGTCCTCCTCGTCTCCCTCGGCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCATTTCTCAGATTCTCCAAGCTTACCATTCGAGCATAGCTTCGACGATAACAACGACGGAGACGAGGTGGTGGCTGGGAGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTTCTTCAAGTAGAGCTTCATTGTTTGGAGGTTGTTACCAGTTAGTGAATGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGCAGAGGTACTCTTAATAATTAG MQTPNYDQISQKSFQTKHEDRLFTRALSKELNSTINSSFRVYYGGATGAIPFRWESRPGTPKHTFSETSIPPLTPPPSYYSTLHSASKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSSSSSSSLASWPSSRSSSSSSPSAFVRPKFFKRRRHFSDSPSLPFEHSFDDNNDGDEVVAGSPNSPTSTLCFGGSSSSRASLFGGCYQLVNVKNALLSIVGHGSASRGTLNN Homology
BLAST of CmUC11G209580 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052017.1 putative serine-rich protein [Cucumis melo var. makuwa]) HSP 1 Score: 372.5 bits (955), Expect = 2.7e-99 Identity = 209/234 (89.32%), Postives = 215/234 (91.88%), Query Frame = 0
BLAST of CmUC11G209580 vs. NCBI nr
Match: XP_011656432.1 (putative protein TPRXL [Cucumis sativus]) HSP 1 Score: 370.5 bits (950), Expect = 1.0e-98 Identity = 207/233 (88.84%), Postives = 216/233 (92.70%), Query Frame = 0
BLAST of CmUC11G209580 vs. NCBI nr
Match: XP_038885974.1 (putative protein TPRXL [Benincasa hispida]) HSP 1 Score: 368.2 bits (944), Expect = 5.1e-98 Identity = 209/233 (89.70%), Postives = 215/233 (92.27%), Query Frame = 0
BLAST of CmUC11G209580 vs. NCBI nr
Match: KAE8646577.1 (hypothetical protein Csa_005771 [Cucumis sativus]) HSP 1 Score: 364.8 bits (935), Expect = 5.6e-97 Identity = 204/229 (89.08%), Postives = 212/229 (92.58%), Query Frame = 0
BLAST of CmUC11G209580 vs. NCBI nr
Match: XP_022134140.1 (putative protein TPRXL [Momordica charantia]) HSP 1 Score: 291.2 bits (744), Expect = 7.9e-75 Identity = 174/234 (74.36%), Postives = 191/234 (81.62%), Query Frame = 0
BLAST of CmUC11G209580 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99 Identity = 209/234 (89.32%), Postives = 215/234 (91.88%), Query Frame = 0
BLAST of CmUC11G209580 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99 Identity = 209/234 (89.32%), Postives = 215/234 (91.88%), Query Frame = 0
BLAST of CmUC11G209580 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 4.9e-99 Identity = 207/233 (88.84%), Postives = 216/233 (92.70%), Query Frame = 0
BLAST of CmUC11G209580 vs. ExPASy TrEMBL
Match: A0A6J1BX95 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 3.8e-75 Identity = 174/234 (74.36%), Postives = 191/234 (81.62%), Query Frame = 0
BLAST of CmUC11G209580 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 1.2e-68 Identity = 159/201 (79.10%), Postives = 168/201 (83.58%), Query Frame = 0
BLAST of CmUC11G209580 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17 Identity = 83/199 (41.71%), Postives = 115/199 (57.79%), Query Frame = 0
BLAST of CmUC11G209580 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11 Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CmUC11G209580 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 58.9 bits (141), Expect = 6.1e-09 Identity = 73/172 (42.44%), Postives = 87/172 (50.58%), Query Frame = 0
BLAST of CmUC11G209580 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06 Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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