CmUC10G197260 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G197260
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr10: 28981068 .. 28985083 (-)
RNA-Seq Expression	CmUC10G197260
Synteny	CmUC10G197260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAATCTAAGAATCTCCGGTTAGCCAATGTGAAAAGCGCCAATATCGCCAGTTCTGATGGAGGTGGCGACCTCGTCGGCGAAGGACAAACAAGAAGAAATACAGCCGCTAAAGGCAACCCAAACCATGTCGGCGATCCAGAACGCCAAGTGCAATGGTAATGTCATGGCCTTCGGTGTGTGTTTTTGGAGTTAAAAAAACGTTGGTTGGGAGTTTCAGAGGGAATCTAAAGAAGGAATGGAGAGCTTAGAGTTAGAGGAAGCCATTGGAGAAGAGAGATAGAGAGAGTTGGGCGGAGACAGAGTAGATAAAGCTGCAAGCTAAGATTGAAGAAATGTTACTCGTAGCTTGTAGCTAAAGCCGATTTGATCGGAATTTCTGTTTCCAGATTATCTTATGGGAAACTAGTTTTTCATTGGGATCTTTCAAATACGGTAAAACAGTAAAAAAATAATTATAAATATGGTAAAATTTCCATCACTCTAGGGATATACACTAAATTCTAATTTTAATTTAGTTTTATAAATTTTAAAATATTACAATTTTATCTTTGATGTTTAGGTATTTCTAAGATTATAATATTTGCATTTTTTAATTTTGATTCTTTTTACCAAATATTCACTTTAATCTTCGATGTAATATCTATAAATTAATCCAAAATAATAATAAATTTAATTTTATAGAAAGGAGTGAAATTTAATTAATTATAATTGTTTTAAATTAATTAAGTATATATTAACATTATATTAGCAACAAAAAAAAATTTGAGATAAAATTGCAACATTTTGAAACCAAATAACTAAATTGAAATCAAACTCAAAACTTAAAGAACTAAGAATATAACTTTTTGAATTCTAAGAAACAAATGAAAACTAGACCAAAATCTAAAGACAAAAATGTAATTTCTCTTATAAACTATAAGGAAAAACCAATTTTATAAGAAGTATCGGAAGAAAAAGAAAAAAAAAAACTTGTAGTCCCAAATTTTATGTTATATGGTTCATAGATATGCAATGGAATGTATAGGATTTATGTTAGCCAAACTATCTTCATTTTGACGTTGAATACATCAATGTTTACCCAATGCATTTATTAAGAATAAGTTTGTCCACACAATGGTGACTATCAAATAATTCAATTGCATTTTGTCCCCAATGCAATTGCTCTCAATAATGCACTTTGCAATATTCTTCACATTTTATCTACATCATAAACCAGCTTCACTTTCCATTTTGATTTATTTTCAAATATGTTTTAAGATGAAGTTTACATCAGATGAAAATCCACAAATCGTAATATAAAAAATAGGTCTTGGGTGATTACTTTTGTTGTTGTTTACCTACGTTTCGTAATCGTAATGAGTTCTAGAACCCACCCTGAAATTTGTAATCAGATATTGTTACTGAAAATTACAAATCTGTCACATTTATTGTTACCTTTACGGTTATTGGTATGATCAAGTAGTAACAATAACAAGTAACAATAAAATGTAACATATTCATAATTTTAGGTAAACGCAAAAAAAAACAATTCAATTATGTTTGCGCGATTTAGGCCTATTGCAATTCATTCATCAATGAAATCTCATTTGGATTACACCAATTTTCATTAAACGTAAGAGAATCGACCTGGTATGTTTTAATGCTTATAATCAATTGAACCTAGATAATTAAGTCTCACAATCCTTGATTTTATAATTGATCGCCATATTTCTAAAATCAATTAACGTAAATTTATGTCTAAATTTAATCCCCAACCCTTTTAGTATTAAACTATAACCAACAAGCTCACCTAAATGATCGGTTTAGATAGACATTAATCAATCAAACAACACTTCAACACTCTGAGCAAAAAATGCAAGTTATACAAAAGAAACAACTGCATTAAATCTATGTCATTAACCCACTTACATGCAATAAATAAATGGGTAATTTGATAGATTAACCTAAGAAACTAGACCAAAAATGATATTTGGCCTAGTTTCCAAAATAAAGGATTTATAACCTTTTTCAAACCTTTTTATATATATTTTTTCTTAGTTTCGTCCTCTATCTCATCTCTCGTTCTATTTCCTTCTATTATCTTCTTTTCACTTTCATGTATTTGACCTCCGATGATAGCAAGAATAACATTCACTTCATTGTATTTTGCCCACGACAACGGCTGTGGCAATAGGGAGCAAAGTTGTTTCTTCTTCCTCTAGTAATAGGCGACACCTGAAAACAACATGCGAAATTTTTCGAGATGAAAAAGGAACCAAGGACAGAAGGCAAGAGCGAAAAAGTGAACAAGAACGAGGGAAAAAAAAAAAAGAAAAAAAGCAATCCATGAATAAGCTTAGTGATGCCAACAAAAGGTTAGAAAGTTTTGTTTTGAAAAAGTCTAATAAAAATTCCATAAATGAGTGGCAGTCAGAAAGAGTAAAACCTGAAGCTAACTTCTATTGGCTTCAGGTTTCTTATGCCAATCTCAACCCACACCCCAACTCTCACTTGTCATTGTCTATTTCCAGTAGGAATCTACATGATTTCTTCCTGCATGAGAAACGTATGAATGTATACTGTAGCAATATGAAAAACAATTGAAATATGTTCTTAAAATCAAAAGCAAAAATCACATGAACAAAAAACAACGAATAGTGTTTATTACAGTAATTAAAGCACAAAAGTATATGCTTTAAACTAATACTTCGATTGTTTCTTCGCCATATCCATTTGTTTGGTCGAAATAACTTAAAATCAAAAGTAAGAAAGCACAAAAAGAAGAAAAAATGGATAGACTGTTCAGTTGCCAAAGTATAAAGATATGGTTTGCATGTTGAAATCAATAGTTTGTTTGCTTCCCACTACATCCCTTTTTCAAATAAAATAGTTTATAGACTAAAAGAAGACTGACCTGTAAAACAGAGGGCAGAAATTTAGGTTAGTTGTTGATGGTGGAAGTAATCTCATCCTTACAAGTTGTTTGCTTCCCTATTTGCCATTTGCCTGCGAATATGGTTGGGAAGGAGAGATGGAGTGGATATTATTGATAACAGGAAATTTTCTGTTAGTAAGGAAGCAATAATAAAAAGTTATAAACATACCAGATTACAAATCAAATGTGACTTTAACAAATTTCTATGACTCTAAAGATTAATTATGAACTGTCTTCTTGCAAATATTATATGATCTTACATAAACAAAGAATATAACACACAGCAGATTAATTGAAGAGAACTTGGACTTCCAAACAAGATTTTCCATCTCCAGAAGAAATTTTTATGTCTGTTTTTAGACATTTCTCCACTTTTTCTTTTGATTTCCTGGTTTAAATATAAGAAAATAAGAACCCACTTCTGAAAATCTCTACAACCAAGAAAACTACAAATTCATGGTTCTCATTTGAAAATGTATTTAGCCACTGAGTAACCAAATCTAAACAAGTAGAAGTATAATTAATACCTAGTTTTCTAGATCTAAAATACGTAAAAAATTTCAGATCTTTTAAATATATCTAAAATAATAAAGTAAAATTCTAACAATAAATTCTCTTTTACTTCTTTAACTATAAAGGAATAGTTGGCAGGGAACTCATGTTTAGCAGATCAAGGAGAGATTAAATCAACTCTAAAATAAAAGGAAACTACTGTTACACAAAATTCACAAGTCAAATTATGAATTCATCAGAAAAGGCAACTAGGAAGCAAATTGGGTGAAATTGCTATAATTGAAACAATCAAATAAGTGCAGTCCATGAATAATGTGTCGTTGAATGATTCTTGTATAATGAGCACAGGAATTGAACCAACCTCTGGGTGTCGTGTAGGAACAAGGAACGTATAAAGAGAACTCTATTCGTGAAGATCTCAGAAACCACAAGCAATCCGTTGCTACTAGTTCTCGCTGCAAAGCTGAGAAAGGACAAAAAAAGGGTTGGTTTATTGCTTTGGTTTAATATTCGTAAAAGCTGCATCCCAGTTTTGAAAGCCAACTGGAAGGCCAAGATGATGTACATTACATTGTTACTGTGA

mRNA sequence

ATGATGAAATCTAAGAATCTCCGGTTAGCCAATGTGAAAAGCGCCAATATCGCCAGTTCTGATGGAGGTGGCGACCTCGTCGGCGAAGGACAAACAAGAAGAAATACAGCCGCTAAAGGCAACCCAAACCATGTCGGCGATCCAGAACGCCAAGTGCAATGGAACAAGGAACGTATAAAGAGAACTCTATTCGTGAAGATCTCAGAAACCACAAGCAATCCGTTGCTACTAGTTCTCGCTGCAAAGCTGAGAAAGGACAAAAAAAGGGTTGGTTTATTGCTTTGGTTTAATATTCGTAAAAGCTGCATCCCAGTTTTGAAAGCCAACTGGAAGGCCAAGATGATGTACATTACATTGTTACTGTGA

Coding sequence (CDS)

ATGATGAAATCTAAGAATCTCCGGTTAGCCAATGTGAAAAGCGCCAATATCGCCAGTTCTGATGGAGGTGGCGACCTCGTCGGCGAAGGACAAACAAGAAGAAATACAGCCGCTAAAGGCAACCCAAACCATGTCGGCGATCCAGAACGCCAAGTGCAATGGAACAAGGAACGTATAAAGAGAACTCTATTCGTGAAGATCTCAGAAACCACAAGCAATCCGTTGCTACTAGTTCTCGCTGCAAAGCTGAGAAAGGACAAAAAAAGGGTTGGTTTATTGCTTTGGTTTAATATTCGTAAAAGCTGCATCCCAGTTTTGAAAGCCAACTGGAAGGCCAAGATGATGTACATTACATTGTTACTGTGA

Protein sequence

MMKSKNLRLANVKSANIASSDGGGDLVGEGQTRRNTAAKGNPNHVGDPERQVQWNKERIKRTLFVKISETTSNPLLLVLAAKLRKDKKRVGLLLWFNIRKSCIPVLKANWKAKMMYITLLL

Homology

[Close]

BLAST of CmUC10G197260 vs. NCBI nr
Match: KAA0053866.1 (hypothetical protein E6C27_scaffold135G002590 [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 5.9e-13
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 9  LANVKSANIASSDGGGDLVGEGQTRRNTAAKGNPNHVGDPERQVQW 55
          LANVKSANIASSDG GD VG+GQTRRNTAAKG PNH+GDPERQ+QW
Sbjct: 16 LANVKSANIASSDGTGDFVGKGQTRRNTAAKGTPNHIGDPERQMQW 61

[Close]

BLAST of CmUC10G197260 vs. ExPASy TrEMBL
Match: A0A5A7UHY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002590 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-13
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 9  LANVKSANIASSDGGGDLVGEGQTRRNTAAKGNPNHVGDPERQVQW 55
          LANVKSANIASSDG GD VG+GQTRRNTAAKG PNH+GDPERQ+QW
Sbjct: 16 LANVKSANIASSDGTGDFVGKGQTRRNTAAKGTPNHIGDPERQMQW 61

The following BLAST results are available for this feature:

BLAST of CmUC10G197260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053866.1	5.9e-13	86.96	hypothetical protein E6C27_scaffold135G002590 [Cucumis melo var. makuwa]	[more]

BLAST of CmUC10G197260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC10G197260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHY6	2.8e-13	86.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CmUC10G197260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G197260.1	CmUC10G197260.1	mRNA