CmUC10G192660 (gene) Watermelon (USVL531) v1

Overview
NameCmUC10G192660
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr10: 23310186 .. 23310527 (-)
RNA-Seq ExpressionCmUC10G192660
SyntenyCmUC10G192660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGATCTGAAAAGAAAAGGTCTATTCACTCTACCACTTTGTGCGTCTGCAGCTTTGTCTTCTTCCATTGCTCTGCAACCGACAGAGTAATAGAGGGAGAAGAAGAAGAGACACAATCGTACTGCAGACCGGCCGCCGGTGAAACTCCCCTCTCCGGCGTTTGTGTTGAGGTCCGATTTTTCTTCAATGCCCACCTCTACATCCTTATCACCATCATCTTCTTCTGCTTCTTCTTCTTTTGCCTTTTTATCCTCTCTGCTTGCTTTGTTCCCACGGCATACTTTTTCGCTTTGATACGCACTCCCAGGGAGGAAAAAGATCGATTCGATCTCGTTTAG

mRNA sequence

ATGTGGAGATCTGAAAAGAAAAGGTCTATTCACTCTACCACTTTGTGCGTCTGCAGCTTTGTCTTCTTCCATTGCTCTGCAACCGACAGAGTAATAGAGGGAGAAGAAGAAGAGACACAATCGTACTGCAGACCGGCCGCCGGTGAAACTCCCCTCTCCGGCGTTTGTGTTGAGGTCCGATTTTTCTTCAATGCCCACCTCTACATCCTTATCACCATCATCTTCTTCTGCTTCTTCTTCTTTTGCCTTTTTATCCTCTCTGCTTGCTTTGTTCCCACGGCATACTTTTTCGCTTTGATACGCACTCCCAGGGAGGAAAAAGATCGATTCGATCTCGTTTAG

Coding sequence (CDS)

ATGTGGAGATCTGAAAAGAAAAGGTCTATTCACTCTACCACTTTGTGCGTCTGCAGCTTTGTCTTCTTCCATTGCTCTGCAACCGACAGAGTAATAGAGGGAGAAGAAGAAGAGACACAATCGTACTGCAGACCGGCCGCCGGTGAAACTCCCCTCTCCGGCGTTTGTGTTGAGGTCCGATTTTTCTTCAATGCCCACCTCTACATCCTTATCACCATCATCTTCTTCTGCTTCTTCTTCTTTTGCCTTTTTATCCTCTCTGCTTGCTTTGTTCCCACGGCATACTTTTTCGCTTTGATACGCACTCCCAGGGAGGAAAAAGATCGATTCGATCTCGTTTAG

Protein sequence

MWRSEKKRSIHSTTLCVCSFVFFHCSATDRVIEGEEEETQSYCRPAAGETPLSGVCVEVRFFFNAHLYILITIIFFCFFFFCLFILSACFVPTAYFFALIRTPREEKDRFDLV
Homology
BLAST of CmUC10G192660 vs. NCBI nr
Match: XP_038903937.1 (probable galacturonosyltransferase-like 7 isoform X1 [Benincasa hispida])

HSP 1 Score: 87.8 bits (216), Expect = 6.5e-14
Identity = 45/61 (73.77%), Postives = 45/61 (73.77%), Query Frame = 0

Query: 1  MWRSEKKRSIHSTTLCVCSFVFFHCSATDRVI------------EGEEEETQSYCRPAAG 50
          MWRSEKKRSI STTLCVCSFVFFHCSATDRVI            EGEEEE  SYCR AAG
Sbjct: 1  MWRSEKKRSIRSTTLCVCSFVFFHCSATDRVIEGEGEGEGEGEGEGEEEERVSYCRLAAG 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038903937.16.5e-1473.77probable galacturonosyltransferase-like 7 isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC10G192660.1CmUC10G192660.1mRNA