CmUC10G191790 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G191790
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr10: 21686249 .. 21686557 (-)
RNA-Seq Expression	CmUC10G191790
Synteny	CmUC10G191790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGAAGAGCAAGAAACTCGTCGTGTTAGCAATGGTGGCTATCGTGCTACTCACGCCCAATTCAGTCGGAGCCACCAACTCCGTGTCCATTGGTGAAGTGATCGAAATCAGTTCCGATGAGGGAAACCAAGTTGGTTCGAACATGATCTTTATCCCAAGAAAAATGTTGAAAAATGGAGGGGTTAGAGTTGAAGCAATATGCCTGATTTCAGGGCAGCCATGCTCGAGTGATGCAGACTGTCCTCCTAGGTGCCTGTGCAATCCTATTCTGAAAACTTGTGGTGCCTGTGCAATCCTATTCTGA

mRNA sequence

ATGGAGATGAAGAGCAAGAAACTCGTCGTGTTAGCAATGGTGGCTATCGTGCTACTCACGCCCAATTCAGTCGGAGCCACCAACTCCGTGTCCATTGGTGAAGTGATCGAAATCAGTTCCGATGAGGGAAACCAAGTTGGTTCGAACATGATCTTTATCCCAAGAAAAATGTTGAAAAATGGAGGGGTTAGAGTTGAAGCAATATGCCTGATTTCAGGGCAGCCATGCTCGAGTGATGCAGACTGTCCTCCTAGGTGCCTGTGCAATCCTATTCTGAAAACTTGTGGTGCCTGTGCAATCCTATTCTGA

Coding sequence (CDS)

ATGGAGATGAAGAGCAAGAAACTCGTCGTGTTAGCAATGGTGGCTATCGTGCTACTCACGCCCAATTCAGTCGGAGCCACCAACTCCGTGTCCATTGGTGAAGTGATCGAAATCAGTTCCGATGAGGGAAACCAAGTTGGTTCGAACATGATCTTTATCCCAAGAAAAATGTTGAAAAATGGAGGGGTTAGAGTTGAAGCAATATGCCTGATTTCAGGGCAGCCATGCTCGAGTGATGCAGACTGTCCTCCTAGGTGCCTGTGCAATCCTATTCTGAAAACTTGTGGTGCCTGTGCAATCCTATTCTGA

Protein sequence

MEMKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVIEISSDEGNQVGSNMIFIPRKMLKNGGVRVEAICLISGQPCSSDADCPPRCLCNPILKTCGACAILF

Homology

[Close]

BLAST of CmUC10G191790 vs. NCBI nr
Match: KGN52756.1 (hypothetical protein Csa_014977 [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-14
Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 3   MKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVIEISSDEGNQVGSNMIFIPRKM-LKNG 62
           M  K LVVLAMV  VLL  NSV AT+ ++I E  E++SDE N+ G  MIF PRK+ L+NG
Sbjct: 1   MSKKTLVVLAMV-FVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNG 60

Query: 63  GVRVEAICLISGQPCSSDADCPPRCLCNPI-LKTCGACAIL 102
           G R+  +CL+ G+PC SDADCP  C C P+ L   G C  L
Sbjct: 61  GSRL-GVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL 99

[Close]

BLAST of CmUC10G191790 vs. NCBI nr
Match: TYK29460.1 (hypothetical protein E5676_scaffold655G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-13
Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 3  MKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVI-EISSDEGNQVGSNMIFIPRKM-LKN 62
          M  K LVVLAM A VLL  NSV AT+ ++I EVI E++SDE N+ G   IF PRK+ LKN
Sbjct: 1  MSKKALVVLAM-AFVLLVANSVRATDIITIDEVIEEVNSDEVNRAGLEKIFAPRKLKLKN 60

Query: 63 GGVRVEAICLISGQPCSSDADCPPRCLCNPI 92
          GG R+  +CL+ G+PC SDADCP  C C P+
Sbjct: 61 GGPRL-GVCLLVGKPCMSDADCPSGCYCKPV 89

[Close]

BLAST of CmUC10G191790 vs. NCBI nr
Match: KAA0044331.1 (hypothetical protein E6C27_scaffold46G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 4.2e-12
Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 14  VAIVLLTPNSVGATNSVSIGEVI-EISSDEGNQVGSNMIFIPRKM-LKNGGVRVEAICLI 73
           +A VLL  NSV AT+ ++I EVI E++SDE N+ G   IF PRK+ LKNGG R+  +CL+
Sbjct: 1   MAFVLLVANSVRATDIITIDEVIEEVNSDEVNRAGLEKIFAPRKLKLKNGGPRL-GVCLL 60

Query: 74  SGQPCSSDADCPPRCLCNPI-LKTCGACAIL 102
            G+PC SDADCP  C C P+ L   G C  L
Sbjct: 61  VGKPCMSDADCPSGCYCKPVPLLDIGYCGFL 90

[Close]

BLAST of CmUC10G191790 vs. NCBI nr
Match: TYK29461.1 (hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-06
Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 1   MEMKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVIEISSDEGNQ-VGSNMIFIPRKMLK 60
           ME+ SKK+ +LAM A+++L   S GAT+S  + EVIE+ SDE N  V +NM    RKM+K
Sbjct: 2   MEIMSKKVGLLAM-AVLMLMAISAGATSS-EVDEVIELPSDEANMVVATNMEMWSRKMMK 61

Query: 61  NGGVR--VEAICLISGQPCSSDADCPPRCLC--NPILKTCGACA 100
            G  +     +CLI G PC+SD +C   C C   PILK  G C+
Sbjct: 62  EGDRKGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILK-LGICS 102

[Close]

BLAST of CmUC10G191790 vs. NCBI nr
Match: KAA0044332.1 (hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-06
Identity = 48/104 (46.15%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 1   MEMKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVIEISSDEGNQ-VGSNMIFIPRKMLK 60
           ME+ SKK+  LAM A+++L   S GAT+S  + EVIE+ SDE N  V +NM    RKM+K
Sbjct: 2   MEIMSKKVGFLAM-AVLMLMAISAGATSS-EVDEVIELPSDEANMVVATNMEMWSRKMMK 61

Query: 61  NGGVR--VEAICLISGQPCSSDADCPPRCLC--NPILKTCGACA 100
            G  +     +CLI G PC+SD +C   C C   PILK  G C+
Sbjct: 62  EGDRKGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILK-LGICS 102

[Close]

BLAST of CmUC10G191790 vs. ExPASy TrEMBL
Match: A0A0A0KY29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000770 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.7e-15
Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 3   MKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVIEISSDEGNQVGSNMIFIPRKM-LKNG 62
           M  K LVVLAMV  VLL  NSV AT+ ++I E  E++SDE N+ G  MIF PRK+ L+NG
Sbjct: 1   MSKKTLVVLAMV-FVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNG 60

Query: 63  GVRVEAICLISGQPCSSDADCPPRCLCNPI-LKTCGACAIL 102
           G R+  +CL+ G+PC SDADCP  C C P+ L   G C  L
Sbjct: 61  GSRL-GVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL 99

[Close]

BLAST of CmUC10G191790 vs. ExPASy TrEMBL
Match: A0A5D3E1P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00540 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.8e-14
Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 3  MKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVI-EISSDEGNQVGSNMIFIPRKM-LKN 62
          M  K LVVLAM A VLL  NSV AT+ ++I EVI E++SDE N+ G   IF PRK+ LKN
Sbjct: 1  MSKKALVVLAM-AFVLLVANSVRATDIITIDEVIEEVNSDEVNRAGLEKIFAPRKLKLKN 60

Query: 63 GGVRVEAICLISGQPCSSDADCPPRCLCNPI 92
          GG R+  +CL+ G+PC SDADCP  C C P+
Sbjct: 61 GGPRL-GVCLLVGKPCMSDADCPSGCYCKPV 89

[Close]

BLAST of CmUC10G191790 vs. ExPASy TrEMBL
Match: A0A5A7TRX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00540 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.0e-12
Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 14  VAIVLLTPNSVGATNSVSIGEVI-EISSDEGNQVGSNMIFIPRKM-LKNGGVRVEAICLI 73
           +A VLL  NSV AT+ ++I EVI E++SDE N+ G   IF PRK+ LKNGG R+  +CL+
Sbjct: 1   MAFVLLVANSVRATDIITIDEVIEEVNSDEVNRAGLEKIFAPRKLKLKNGGPRL-GVCLL 60

Query: 74  SGQPCSSDADCPPRCLCNPI-LKTCGACAIL 102
            G+PC SDADCP  C C P+ L   G C  L
Sbjct: 61  VGKPCMSDADCPSGCYCKPVPLLDIGYCGFL 90

[Close]

BLAST of CmUC10G191790 vs. ExPASy TrEMBL
Match: A0A5D3E1J3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00550 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.7e-07
Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 1   MEMKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVIEISSDEGNQ-VGSNMIFIPRKMLK 60
           ME+ SKK+ +LAM A+++L   S GAT+S  + EVIE+ SDE N  V +NM    RKM+K
Sbjct: 2   MEIMSKKVGLLAM-AVLMLMAISAGATSS-EVDEVIELPSDEANMVVATNMEMWSRKMMK 61

Query: 61  NGGVR--VEAICLISGQPCSSDADCPPRCLC--NPILKTCGACA 100
            G  +     +CLI G PC+SD +C   C C   PILK  G C+
Sbjct: 62  EGDRKGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILK-LGICS 102

[Close]

BLAST of CmUC10G191790 vs. ExPASy TrEMBL
Match: A0A5A7TM06 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00550 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.7e-07
Identity = 48/104 (46.15%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 1   MEMKSKKLVVLAMVAIVLLTPNSVGATNSVSIGEVIEISSDEGNQ-VGSNMIFIPRKMLK 60
           ME+ SKK+  LAM A+++L   S GAT+S  + EVIE+ SDE N  V +NM    RKM+K
Sbjct: 2   MEIMSKKVGFLAM-AVLMLMAISAGATSS-EVDEVIELPSDEANMVVATNMEMWSRKMMK 61

Query: 61  NGGVR--VEAICLISGQPCSSDADCPPRCLC--NPILKTCGACA 100
            G  +     +CLI G PC+SD +C   C C   PILK  G C+
Sbjct: 62  EGDRKGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILK-LGICS 102

The following BLAST results are available for this feature:

BLAST of CmUC10G191790 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52756.1	1.2e-14	53.47	hypothetical protein Csa_014977 [Cucumis sativus]	[more]
TYK29460.1	1.0e-13	57.14	hypothetical protein E5676_scaffold655G00540 [Cucumis melo var. makuwa]	[more]
KAA0044331.1	4.2e-12	52.75	hypothetical protein E6C27_scaffold46G00540 [Cucumis melo var. makuwa]	[more]
TYK29461.1	1.2e-06	46.15	hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa]	[more]
KAA0044332.1	2.0e-06	46.15	hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa]	[more]

BLAST of CmUC10G191790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC10G191790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY29	5.7e-15	53.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000770 PE=4 SV=1	[more]
A0A5D3E1P7	4.8e-14	57.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TRX6	2.0e-12	52.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E1J3	5.7e-07	46.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TM06	9.7e-07	46.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CmUC10G191790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G191790.1	CmUC10G191790.1	mRNA