CmUC10G191690 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAAGGTCAACTGGTTGTTTGGAACCAACTAGATGTTTGGACGTGGAAGAGATGGTTGCGATATTCCTACACATTCTTGCACACAATGTTAAGAATCAAGTGATACACATAAACTTTTCGAGGTCTAACGAGACTGTTTTGAGATATTTCAACACAGTTCTTAGAGCAGTCTTTCAAATTTGCACCGCTTTATTGAAAAAACTAGAACCAATCACAAGTACATGCATTGATGGATGATGGAAATGGTTTCAAGTACAAAAAGTACTCAATTTTTTTATATGAATATGTCATAAGTATGCATGCAATGATAGATATTTTTTTAATTTATTATGATCACTTGAGGAGAACAGAATTGTCTAGGTGCGTCAGATGACACATACATTAAAGTGAATGTTAGTGCATTCGATCCACCTGGATATAGGACGAGAAATAGAGAGATCACCATAAACGTTCTTGCGATCTGTAACCAAAATGGGGAGTTCGTCTTCGTTCTGCTAGGGTGGGAAGAGTCTGCAGCTAATTCAAGGGTTTTTAGGGATGCAATTTTGCGATCGTACAGATTGAGGGTTCTGAAGGGTATTATAATGAACGTATACGTTATTTAAACATGTGTGAATGCCACAACACCTATGCATGATATTTCAAAACGTGTATAAGATACTATTACCTGCGTAATGTTGGATACCGTAACACTGAAGGAATCTTGGCTCAGTATAGAGGGGAATGATACTATCTCTTAGATTGGTGTGGAGCAGGAAACGCACTGACAATTGCAAGCGAATTTTTCAACATGAAATATTCTTCAGCAAGGAATATTATTGAGCGGGCATTTAGGTTGCTCAAGGGGTGATGGGATATTCTTAGGGGCAAATCATTCTACCCAATACAAGTCCAATGTCGAACAATAACTACATGTTGCCTTATTCACAACTTGATCACAAGGGAGATGGGAATCGATGCAATGCTTGATGTGCCTGTTGAGGAGAATTCTGCATTAGTTGGTCTTGATGAGGATCATAATGAATTTGTTGAATCCTCGAAGGAATAGACCAAGTTTAGGGTTGACTTGGCAGTCAAAATCTTTACTCAATGGCAGGGAGCCTGATTATTCATTGCTTACTTTTGTTTAAGTATTGAATGGAATTTAATTATGGAACATTTTAAGTATGTTGTGAACATGTTTTGTGTCCAGACTGTATGTGAACATGTTAAATTGGAACATATAATTTCAGCAGTATATCCTTCGTTTGTGCATGTGTTTAATTTAGAACATCTTTTCATTCAACAAATGTATGCATGCAGCATAATGACATTTAATGGTAGGAGATCTAAACACGTATGGTCGAAGGTGGAGAACGCTAAGTTGGTGGAAGGCTTATTGTACTTGGTGGAAACCGGTTGAAGGTCCAACAATGGAACGTTTGAACCAGGATACCTACATCACTCGGAGCGAATTCTACATGAGAAAGTGCCCAGGTGCACACTAAACCAGAACACCATTGAGTGCAAGGTGAGGAGTTTGAAGAAACAATACAACACAGTATCATAGATGTTAAGTCAGTCGGGGTTCAGATGAAATGAGGAGTTCAAATGTGTCCAAGTGGAGAGAGATTTTCGATCTTTGGGTTTGGGTAAGATTCTAAAAAAAGAATAAAAAAGGAACTAGTACATGTTATCATATGATTATTAATAATGTTTATGTGTATTAATGCAGAGTCATCCCACTGCGAAGGAAATGTGGAACAAGTCATTCTCTCTACCGTATTTGGGAAAGACAGAGCAGTAGGACAATCAAGTGAGGCCCTGCACGTGATGGCAATGAATGCATTTAGAGAGTTTGAAGATGAGATTCAGCTTGGATCACAGGAATATCACACACATGAGGTTCGCGAGACAGAATAA ATGCTAAGGTCAACTGGTTGTTTGGAACCAACTAGATGTTTGGACGTGGAAGAGATGGTTGCGATATTCCTACACATTCTTGCACACAATGTTAAGAATCAAGTGATACACATAAACTTTTCGAGGTCTAACGAGACTGTTTTGAGATATTTCAACACAGTTCTTAGAGCAGTCTTTCAAATTTGCACCGCTTTATTGAAAAAACTAGAACCAATCACAAGTGCGTCAGATGACACATACATTAAAGTGAATGTTAGTGCATTCGATCCACCTGGATATAGGACGAGAAATAGAGAGATCACCATAAACGTTCTTGCGATCTGTAACCAAAATGGGGAGTTCGTCTTCGTTCTGCTAGGGTGGGAAGAGTCTGCAGCTAATTCAAGGGTTTTTAGGGATGCAATTTTGCGATCGTACAGATTGAGGGTTCTGAAGGGAGATCTAAACACGTATGGTCGAAGGTGGAGAACGCTAAGTTGGTGGAAGGCTTATTGTACTTGGTGGAAACCGGTTGAAGGTCCAACAATGGAACGTTTGAACCAGGATACCTACATCACTCGGAGCGAATTCTACATGAGAAAGTGCCCAGAGTCATCCCACTGCGAAGGAAATGTGGAACAAGTCATTCTCTCTACCGTATTTGGGAAAGACAGAGCAGTAGGACAATCAAGTGAGGCCCTGCACGTGATGGCAATGAATGCATTTAGAGAGTTTGAAGATGAGATTCAGCTTGGATCACAGGAATATCACACACATGAGGTTCGCGAGACAGAATAA ATGCTAAGGTCAACTGGTTGTTTGGAACCAACTAGATGTTTGGACGTGGAAGAGATGGTTGCGATATTCCTACACATTCTTGCACACAATGTTAAGAATCAAGTGATACACATAAACTTTTCGAGGTCTAACGAGACTGTTTTGAGATATTTCAACACAGTTCTTAGAGCAGTCTTTCAAATTTGCACCGCTTTATTGAAAAAACTAGAACCAATCACAAGTGCGTCAGATGACACATACATTAAAGTGAATGTTAGTGCATTCGATCCACCTGGATATAGGACGAGAAATAGAGAGATCACCATAAACGTTCTTGCGATCTGTAACCAAAATGGGGAGTTCGTCTTCGTTCTGCTAGGGTGGGAAGAGTCTGCAGCTAATTCAAGGGTTTTTAGGGATGCAATTTTGCGATCGTACAGATTGAGGGTTCTGAAGGGAGATCTAAACACGTATGGTCGAAGGTGGAGAACGCTAAGTTGGTGGAAGGCTTATTGTACTTGGTGGAAACCGGTTGAAGGTCCAACAATGGAACGTTTGAACCAGGATACCTACATCACTCGGAGCGAATTCTACATGAGAAAGTGCCCAGAGTCATCCCACTGCGAAGGAAATGTGGAACAAGTCATTCTCTCTACCGTATTTGGGAAAGACAGAGCAGTAGGACAATCAAGTGAGGCCCTGCACGTGATGGCAATGAATGCATTTAGAGAGTTTGAAGATGAGATTCAGCTTGGATCACAGGAATATCACACACATGAGGTTCGCGAGACAGAATAA MLRSTGCLEPTRCLDVEEMVAIFLHILAHNVKNQVIHINFSRSNETVLRYFNTVLRAVFQICTALLKKLEPITSASDDTYIKVNVSAFDPPGYRTRNREITINVLAICNQNGEFVFVLLGWEESAANSRVFRDAILRSYRLRVLKGDLNTYGRRWRTLSWWKAYCTWWKPVEGPTMERLNQDTYITRSEFYMRKCPESSHCEGNVEQVILSTVFGKDRAVGQSSEALHVMAMNAFREFEDEIQLGSQEYHTHEVRETE Homology
BLAST of CmUC10G191690 vs. NCBI nr
Match: XP_038875111.1 (uncharacterized protein LOC120067643 [Benincasa hispida]) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-34 Identity = 89/161 (55.28%), Postives = 104/161 (64.60%), Query Frame = 0
BLAST of CmUC10G191690 vs. NCBI nr
Match: TYK08067.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 157.1 bits (396), Expect = 2.0e-34 Identity = 83/148 (56.08%), Postives = 108/148 (72.97%), Query Frame = 0
BLAST of CmUC10G191690 vs. NCBI nr
Match: KAA0050107.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 156.8 bits (395), Expect = 2.6e-34 Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 0
BLAST of CmUC10G191690 vs. NCBI nr
Match: XP_008455792.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo]) HSP 1 Score: 156.0 bits (393), Expect = 4.4e-34 Identity = 87/161 (54.04%), Postives = 106/161 (65.84%), Query Frame = 0
BLAST of CmUC10G191690 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 154.1 bits (388), Expect = 1.7e-33 Identity = 85/161 (52.80%), Postives = 107/161 (66.46%), Query Frame = 0
BLAST of CmUC10G191690 vs. ExPASy TrEMBL
Match: A0A5D3C7X6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002160 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 9.6e-35 Identity = 83/148 (56.08%), Postives = 108/148 (72.97%), Query Frame = 0
BLAST of CmUC10G191690 vs. ExPASy TrEMBL
Match: A0A5A7U6W3 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001210 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.3e-34 Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 0
BLAST of CmUC10G191690 vs. ExPASy TrEMBL
Match: A0A1S3C1U8 (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 2.1e-34 Identity = 87/161 (54.04%), Postives = 106/161 (65.84%), Query Frame = 0
BLAST of CmUC10G191690 vs. ExPASy TrEMBL
Match: A0A5A7SQU2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00070 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 8.1e-34 Identity = 85/161 (52.80%), Postives = 107/161 (66.46%), Query Frame = 0
BLAST of CmUC10G191690 vs. ExPASy TrEMBL
Match: A0A5D3BXH4 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00290 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33 Identity = 87/173 (50.29%), Postives = 109/173 (63.01%), Query Frame = 0
BLAST of CmUC10G191690 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 79.0 bits (193), Expect = 6.4e-15 Identity = 52/159 (32.70%), Postives = 80/159 (50.31%), Query Frame = 0
BLAST of CmUC10G191690 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 3.6e-10 Identity = 37/86 (43.02%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of CmUC10G191690 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 3.8e-07 Identity = 41/156 (26.28%), Postives = 65/156 (41.67%), Query Frame = 0
BLAST of CmUC10G191690 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 3.5e-05 Identity = 40/134 (29.85%), Postives = 67/134 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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