CmUC10G188760 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCAAGTTAATTTGGAATTTAAGTTCGAGTTGGGTACAAGTACAAGATCCAAATCCAAATCCGACTTACGACGTAAATAATGGGAGGACGGCACCTGTCACCCACGTGCTAGAGTTCTATTGGTCTGTGTTTGAACTTGTATCAACGTCACGGTACGCCAGTCCCCAGCATCCTCATCCATTCGTCCTCCATTCATTGCCACATCAAACCAAAACCCCGAACTTCCCCAATTTTGCCCAAACTTCTCACTCGCAAGTCGCAACCACCATCACCCATCAATCCCTTCCTCCGATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTGGCTTCCACCGCTTTCTCCGGCCGTCGGAGTTCCGTCGCTCTCCCGCAGTGCAGAGGCTTGAAGATCGCTCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCTAATGCTAGATTTACTCAGCGTTCGGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGGTTCGGATTCTGTTCTGCTATTTTCTTTTACTGTCTTTTTCTCTTGTTGGGATAAGTGAGGAATGGATTTTTCTTTTTTTTTTTTATTACGATACTTAGTATCTGTTGATGTTTGGTTTTGTTTGGTTTTGATACGCATGAAACTCAACAGGTGTGCAATTAGTAAATAATATGTTAAAGCGCCTCTAGAATTATAACTTATAAGCGTCAGCTTAAGACAAGTTTAACTTTTTCAGTATACGCTTAATATAAAATTAGAGAGAAACTAATGAAAAAATAAACATAGAAATCGCTTTGGTGGAGTGATGTTGACATGGTATAACAAATCATTTCCTGTTTGAATTTATGTACATGTCATATTCTTTCCCCATCCTTGCATTTGCTTGGATCTGAATGTAAATTACAGTGACACTAAGTTGGGATGTATCTGATGGATTGTTTGGAATGACTACCTAAGTGCTGTTTTTAAATACTTGAAAAGTCATTTCAAATAGCCACTTAATTGGACTGTAGAAATGTATTTCTAGTTCGAAGTGAAAGCTCGAGCATTAAAATTTCAAACGAATGACTACATTGATCATATAATATTACCTGAGATGATGCATTAGGCAATCAGTGGACACCCCATGGGTGAGTGATAAACCAATTCCGTCAATGCACCTTTGAGAGGGATAAGAGAGGGTCTCTGGGAGGGAGGTTGGCACTAAGCATTAGGAGTGTTAGTTGTTAATTGAGAAGATGGTTTCTACTGTGCCTGGGCCTTAATGATGCTACAAAGAGTGATCTGTAGGGAGCTGGTCTGATATTGGCTCAATATGTTGGGGGAAAGTGCCCCAGTTGTCTTTCTCTCTTGGTTCTGCCCAGTTCTCGTGTCCCGCTCTTTTTTGTGTGTATGAGTGAGCTTGTTTCTGTATGCATCTTGATTTGATTTGCATAGGAGCCACTGTTTACCTTGCATGACATCAGATTCTGAATCTTTTACAATAGGTATAAGTGTAACATTGAAATGATAACGCGTGTGTTGGTGGTTGTCGTTCCTGCACATTGTATTTTGATTGTTATTCTGCATGATTTCTATGAAATAACAGCTCTCTAACCATCTAAACGGTTATGAAATGGTGCAATTCAGCTACCTTTATAGTCCATTGTATACACATGCGCACATACAAACAATTTGCATGTAATGTATATGGTTCATAATATTTGTCCAGTTTGGTCAAATTTTAAAAAAAAATTAATTCAATTAGAGAGTTCCATCTGTTCTTATATTGGGGAGTTTACTTGTATCAAAATTTTCCCTACTGTCATGTACCAGCATTTATTTTATTTATGAGATCATGGGAAGAGGACATCGGAAATTTCTGTTTTAACTTTAAGAATTGTGACACTTTCAACTGACTTTGAGTTTAGTTCTCTGTATCATTGATTGTACTAATTCTTCATCACTTGCTGTGATGTTCATATTAATCCTGGAAGGTCACAGTACTCAGTTCATGTTAGTATGTTCTCTTTTGACTCTTACTCTGCTGCCTGCCCAATTCGCGGGTCAATGATGTCACCTGCACCTACTTTTTCTCTCCTCGAAAAGCCCTTGTTGAGTTTAATTGAAATCGCTTGTTTCTTGAATGTTGCAGTACCTGCTGCTTCAGAAGCTACCTGGAAGTCACTGGTTATAGAATCTAAATTACCCGTACTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCAATCATTGATGACCTATCTAAAGAGTACGCTGGAAAGTTCAAATTTTACAAGGTGGATACCGATAACAACTCTTCAATTGCATCCCAATATGGTATTAGAAGCATACCTACAGTCATTATCTTCAAAGATGGTGAGAAGAAGGAGGCAATAATAGGTGCAGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAGAGATGGCTGATATAAAGTATGAATTGAAAGATTTAAGCTGCTTTCCCATTATTTCCTTAATTTTAGCCTCTAATATGTGAAGATGAATTCTCTACTTTGGAAATAAACTCTCTTCTTTTGTTACATATAGTTCTTGATGCCTCTGTATCTTCTTTAGGTTGTATTTATTGCTGCAATACTTTTACTATGAATGCATCTTTCTTTACAGAATTATTTACTTTAGTAATTTTAATATACATGAAATTCTTCTATGTTCTGTTATTTGTATTAATCAATACTTGCTTGCAAATCTTCTGCTGGAATGCATGAATTGCTTGCCACTTGGTATTGAAGAGAGAGAACTTTTGGTGCATATTTTAAAGGAATTCTCTACATGTAATCTTTGTTTTGAGTCATTTTTAGTTGATTGAAAGCAGTAAAACAAAAAGTATTTGACGTATTGTGCAGATTAGGCAAGTTTCTGAAGCAGCTGCATTAGAATTAGAGGGGCCTTGGAACTCTGCATTTTTCACTCTTAACTTCATCACAAAGGATATAGGGCGGCGTAGCTTGTTGCATGGAAGGAATAGGTTTCAAGTTTGGCTTTATGTACATAGGGGAAATTTGCCACTCCTACCGAACATCTTTCATACCTTCCTTCTATAGTGACATGTGTCAGTATTATACATTTTTATTTATTTAACTTTTTTACATTGGTCCCGCCATGATTTTAAACACGTTTTTATTTTATTTTATTT ATGGTCAAGTTAATTTGGAATTTAAGTTCGAGTTGGGTACAAGTACAAGATCCAAATCCAAATCCGACTTACGACGTAAATAATGGGAGGACGGCACCTGTCACCCACGTGCTAGAGTTCTATTGGTCTGTGTTTGAACTTGTATCAACGTCACGGTACGCCAGTCCCCAGCATCCTCATCCATTCGTCCTCCATTCATTGCCACATCAAACCAAAACCCCGAACTTCCCCAATTTTGCCCAAACTTCTCACTCGCAAGTCGCAACCACCATCACCCATCAATCCCTTCCTCCGATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTGGCTTCCACCGCTTTCTCCGGCCGTCGGAGTTCCGTCGCTCTCCCGCAGTGCAGAGGCTTGAAGATCGCTCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCTAATGCTAGATTTACTCAGCGTTCGGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGGTTCGGATTCTGTTCTGCTATTTTCTTTTACTGTCTTTTTCTCTTGTTGGGATAAGAGCCACTGTTTACCTTGCATGACATCAGATTCTGAATCTTTTACAATAGTACCTGCTGCTTCAGAAGCTACCTGGAAGTCACTGGTTATAGAATCTAAATTACCCGTACTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCAATCATTGATGACCTATCTAAAGAGTACGCTGGAAAGTTCAAATTTTACAAGGTGGATACCGATAACAACTCTTCAATTGCATCCCAATATGGTATTAGAAGCATACCTACAGTCATTATCTTCAAAGATGGTGAGAAGAAGGAGGCAATAATAGGTGCAGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAGAGATGGCTGATATAAAATTAGGCAAGTTTCTGAAGCAGCTGCATTAGAATTAGAGGGGCCTTGGAACTCTGCATTTTTCACTCTTAACTTCATCACAAAGGATATAGGGCGGCGTAGCTTGTTGCATGGAAGGAATAGGTTTCAAGTTTGGCTTTATGTACATAGGGGAAATTTGCCACTCCTACCGAACATCTTTCATACCTTCCTTCTATAGTGACATGTGTCAGTATTATACATTTTTATTTATTTAACTTTTTTACATTGGTCCCGCCATGATTTTAAACACGTTTTTATTTTATTTTATTT ATGGTCAAGTTAATTTGGAATTTAAGTTCGAGTTGGGTACAAGTACAAGATCCAAATCCAAATCCGACTTACGACGTAAATAATGGGAGGACGGCACCTGTCACCCACGTGCTAGAGTTCTATTGGTCTGTGTTTGAACTTGTATCAACGTCACGGTACGCCAGTCCCCAGCATCCTCATCCATTCGTCCTCCATTCATTGCCACATCAAACCAAAACCCCGAACTTCCCCAATTTTGCCCAAACTTCTCACTCGCAAGTCGCAACCACCATCACCCATCAATCCCTTCCTCCGATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTGGCTTCCACCGCTTTCTCCGGCCGTCGGAGTTCCGTCGCTCTCCCGCAGTGCAGAGGCTTGAAGATCGCTCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCTAATGCTAGATTTACTCAGCGTTCGGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGGTTCGGATTCTGTTCTGCTATTTTCTTTTACTGTCTTTTTCTCTTGTTGGGATAAGAGCCACTGTTTACCTTGCATGACATCAGATTCTGAATCTTTTACAATAGTACCTGCTGCTTCAGAAGCTACCTGGAAGTCACTGGTTATAGAATCTAAATTACCCGTACTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCAATCATTGATGACCTATCTAAAGAGTACGCTGGAAAGTTCAAATTTTACAAGGTGGATACCGATAACAACTCTTCAATTGCATCCCAATATGGTATTAGAAGCATACCTACAGTCATTATCTTCAAAGATGGTGAGAAGAAGGAGGCAATAATAGGTGCAGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAG MVKLIWNLSSSWVQVQDPNPNPTYDVNNGRTAPVTHVLEFYWSVFELVSTSRYASPQHPHPFVLHSLPHQTKTPNFPNFAQTSHSQVATTITHQSLPPMATVLDSLTLPCSSALASTAFSGRRSSVALPQCRGLKIAHSFTSHSIRSARSNARFTQRSATIVCEAQETAAIGSDSVLLFSFTVFFSCWDKSHCLPCMTSDSESFTIVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL Homology
BLAST of CmUC10G188760 vs. NCBI nr
Match: XP_038905006.1 (thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benincasa hispida]) HSP 1 Score: 320.1 bits (819), Expect = 2.1e-83 Identity = 171/212 (80.66%), Postives = 174/212 (82.08%), Query Frame = 0
BLAST of CmUC10G188760 vs. NCBI nr
Match: XP_004133707.1 (uncharacterized protein LOC101204508 [Cucumis sativus] >KGN56239.1 hypothetical protein Csa_010560 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 6.6e-77 Identity = 159/211 (75.36%), Postives = 167/211 (79.15%), Query Frame = 0
BLAST of CmUC10G188760 vs. NCBI nr
Match: XP_022984702.1 (uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharacterized protein LOC111810091 [Cucurbita pepo subsp. pepo] >KAG6577376.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 298.5 bits (763), Expect = 6.6e-77 Identity = 159/212 (75.00%), Postives = 169/212 (79.72%), Query Frame = 0
BLAST of CmUC10G188760 vs. NCBI nr
Match: XP_022929416.1 (uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 296.2 bits (757), Expect = 3.3e-76 Identity = 158/212 (74.53%), Postives = 168/212 (79.25%), Query Frame = 0
BLAST of CmUC10G188760 vs. NCBI nr
Match: XP_022142885.1 (uncharacterized protein LOC111012890 [Momordica charantia]) HSP 1 Score: 270.8 bits (691), Expect = 1.5e-68 Identity = 143/213 (67.14%), Postives = 166/213 (77.93%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2) HSP 1 Score: 168.3 bits (425), Expect = 1.4e-40 Identity = 96/223 (43.05%), Postives = 132/223 (59.19%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-37 Identity = 93/214 (43.46%), Postives = 126/214 (58.88%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy Swiss-Prot
Match: Q9SEU8 (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2) HSP 1 Score: 157.5 bits (397), Expect = 2.4e-37 Identity = 88/219 (40.18%), Postives = 128/219 (58.45%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy Swiss-Prot
Match: Q6H7E4 (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639900 PE=2 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 9.1e-37 Identity = 68/115 (59.13%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy Swiss-Prot
Match: O48737 (Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35 Identity = 78/193 (40.41%), Postives = 115/193 (59.59%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy TrEMBL
Match: A0A6J1J2W9 (uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 3.2e-77 Identity = 159/212 (75.00%), Postives = 169/212 (79.72%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy TrEMBL
Match: A0A0A0L5C6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 3.2e-77 Identity = 159/211 (75.36%), Postives = 167/211 (79.15%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy TrEMBL
Match: A0A6J1EN29 (uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC111435994 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76 Identity = 158/212 (74.53%), Postives = 168/212 (79.25%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy TrEMBL
Match: A0A6J1CM67 (uncharacterized protein LOC111012890 OS=Momordica charantia OX=3673 GN=LOC111012890 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 7.2e-69 Identity = 143/213 (67.14%), Postives = 166/213 (77.93%), Query Frame = 0
BLAST of CmUC10G188760 vs. ExPASy TrEMBL
Match: A0A6J1FMY5 (uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446910 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 4.3e-66 Identity = 138/212 (65.09%), Postives = 156/212 (73.58%), Query Frame = 0
BLAST of CmUC10G188760 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 ) HSP 1 Score: 168.3 bits (425), Expect = 9.6e-42 Identity = 96/223 (43.05%), Postives = 132/223 (59.19%), Query Frame = 0
BLAST of CmUC10G188760 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein ) HSP 1 Score: 157.5 bits (397), Expect = 1.7e-38 Identity = 88/219 (40.18%), Postives = 128/219 (58.45%), Query Frame = 0
BLAST of CmUC10G188760 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 ) HSP 1 Score: 151.0 bits (380), Expect = 1.6e-36 Identity = 78/193 (40.41%), Postives = 115/193 (59.59%), Query Frame = 0
BLAST of CmUC10G188760 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-25 Identity = 48/105 (45.71%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of CmUC10G188760 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein ) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-25 Identity = 44/100 (44.00%), Postives = 76/100 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|