CmUC10G188360 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G188360
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	cytochrome c-type biogenesis ccda-like chloroplastic protein
Location	CmU531Chr10: 8302267 .. 8307871 (+)
RNA-Seq Expression	CmUC10G188360
Synteny	CmUC10G188360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAGAATCACTCTCTAACTTTCGTTACTTTCTTCTTCTTCGTGTTTGTGGGCAGAAGAAATCTTTGGCAACTACCAACTTCTCCACTACCTCTGCTCTCTATTCCAGATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCCGCATCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACTGCCCAACACGCCAGGTAATAATACCTTTCATTTGGTTCTATATCAAAGTCAATGACTGAAACACCACTTCAAGATGTAGACGAACTTTCGGTTGATTCCCACATCGTAATGAAGTATTGGGTATTGAATGGTTTATCTAGGGAGAACGTTTAGGGTACATTTTGTGAGATTAACTGTGGGGGGATGTTTTGATCATGATGTATTCAACTGTCTCATAGAGGGTCACTGGTTTCTTTAGGTAAATATGTCGTGCCTATGAAATTTCTTGGGAGAAAATCCGCAGCTGATGATCAAAATAAAGATGTTGAGTTGGTGGAGATTAAAAACAGCAGCAATTATTTTCAAGCCATGGCTTTTGTAAATGCCATTTCTGGTAATGCTTCTGCACTCTGCCTCAGGTGGAAGATTGTTCTACTTCAATCTTGTTATAATCATTTATCTATGTTCTGTTTCAATTGATAGTTTGTTCATTAGATGACTATGCTTGGTTATTTCATAAGTAGCCATAAGCAATCTGGTATATGGTATCAAGGCAACCTCTTACTCTCAAATCCTATGTTTTCACTCCTAGTAAAATAAAATACATCTTGGGCTTTATCCCTGCTGTGGTTTAGTATGAATGAATATTCTTAATTTTATTTCATTTTCAATATTCCAGCGACAAGTTTCCTTGCAGTAGATGCCGCGAAGGCTGAAACTTTAAAGCATATGTGGGTAAGAGTTTATAGTCCTCGTTTATTTTGTTTTCTAAAGCGACCTGAATCTATATCATTTTCAGACTTTAATTCCCTAAAACCCATTTATTTCATTACTTTTTAAGATTTTGAATATCATTTTTCACCATTTCCTTGAGAATCTTGATGAAATCTTGATGTATTTCTATTTCCCCTTGGACATAGTCGTGAGATGTTTCTTTATTTGGTGAGTTTCAATTGTTTGTGCTTTTATGATGGCAAAGATTTTGATTGTTTATTTATTTTACTATTTTTTGGGGTGAGGGTATGGGCGTGCCGGATAAGAATGGTTAATTCATCATGACTTCAACAGAAACCCGAAGCTTGGTAACAGGGCTGCTCTTTAGCATTTCTTAGGTTGCTTGCTTAAGATGTTGGTCTCTATCAATTGAATATCATGGTAACTAAATTAGTCTGCGTACATATTTTGCTTGGTGTATAACTGTACATTATATCAGGAACTAGAATTATTTTCCTTCAAGTCAGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTGTCTGCTCTTAGTTTTACAAGGTCCAGTCTTGTTTTTCTGCACTTTGCTTTTCATGTCTTTTAATGCCTTGAATTTGATAGTAAACGGCTCTTTATTATTTATCTGCCCTTGACTACTTATTCCTTTGTACAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGTCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGTAAGCATTTCATACACACGTTTTTGCAATCTCGGTATGTTATTTTCGGTCTTATGTTGATGTGGTGATCCAACGAAACTTTGTAGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTGAATTACTTTCTAAGCAAGTTCCAACTTTCTCCTCTTGCTCTGTGTGATCGTAGTATCAAATTATAGAAATCTTTTAATCATGTGAGCTCAACATTCAAGATCCTAGGCTCCGCCCTTTAGATGGAAACTTGGAAAGTTTAGGCCTGGTTTGATAACCTTTTTTTTTTTTTTCTTTAATTTTTAGTTTTTGAAAATTGAACTTGTAAACTCTATTTCCACCCATTGTTCGGTTCTCTACTTTCTACAAATATTTTCAATAGCAAGTCAAGTTTTCAAAAATAGAATAAAGTAGTTTTCAAAAACTAGTTATTTTTTTAAGAATTTGACTTGGAATTCAATTATTTCTTTAACAAAAGTTAACCATAATCGGAAAATTGAGAGAAACGAGCATAAATTTTAAAAACAGATAACTAAAAACCAAATCACTGAATCATTATCAAACAGAGCCTTGATAATTTATAACCCTTGTTATCTCTGTGAGTTGGGCTTGGTGTAGACAAATCCTTCATGAGATTAGTGGGGTAGGCCATGAGTATGTTGTAAGAAGTAGGGGCCTTCAACACCCTGGTTATAGAAAAATAATAATAATAAACTAGGACTAGAAAGAAATTATTCAATGGTTCTGTGATGCTAGAGTCTTATTATTCGGTCCAGATTTATCATCATTGTTACTGTATCTTCTAGTTGCTTTGAACTTGAGTGCATTTCTATCGAAATATATGAATCAATGCGAGGGTAGTAAGGGATATCTTGGTTGTAGTAATAGGATATTAGTAAGGGCATAGTGGTAATTAGTTAGTGCTGCTTTGGTTAAAATAAGGAAAGTTGGGCACCTTAGGGAATCATTTTGTTTAGTCAAGACTCAATCCTAAGTGGATTTGTTGTGGGAGAGAGATGGCGCTCTCACAAGACTATTGATATTGCAATATAGTTATCTTTACTTCTTTAATTTTTCATATTTTTTTCTGTTTGGTGTCCTAACAGAATCCTTCTAGGCTTCTACTGTTCGGGATGAATATACATGTTTATGTGATATAGATTTTATAGAAAGGCAGTTAATTGGAATTTGGTCTCTTTATATTTTCAGGTTGTTGGAAACTCCGTTGCTTTCTCATTAGGACTTGCTACGACCCTGGCGCTGTTAGGTATAGCAGCTTCTTTTGCTGGCAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCTTAAACCTACTGGAGGTACTTATTAAAGCAGGATTAGTTGTATGGACTACCAAGTTGCAAACTTGATTATTTATTTATTTTTGCGAGCAGAACACTTGAAATTGAAATGCTAATTTTGGGAGAAGGGTTGACGTTGGCCAATGTTTTTCCCATCTTTATCATTTAACACCTGAAATCTTTTCAACTGAAAGTTTTGCATAAATGTTCTATAATGTAATTTGTATCTTCGTAAGAACATGAACCCATGATATGGAACTGTCCTGGAGTTACTATCGTTGATTTATTTATTTATTTTTATTTCTTTTCATTTTGATGACTAAAAAAGGCATAAGGCACAAAGATTGAAGGGTACTCTGGTATATCATTACCTATTACTCGGAATCATCTTTCTTTTGTGGAAAGACTAATTAAATTTGTCTCATTATAAATGATATTAGTTTCACTTATTTGTATTTGTTAGTGGGTTGCAGAACCAGATAACTAAGTACTCAGACTGCTTTTTCACAATTTCATTTTGGTTTAGTCTTCTGATGGATTGATTCTACAATTTGTCATGAATTGCAGATAATTGAGTTGCGACTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCAGCTGCCAGCTTTCCATCAAGTAATTGGCCTCTCCATTTCTTTTTGTCCACTGGTTACTTTTCTGGATGCTCTAACATGGTTTTAAATCTGATGTATTAGGTGTGCAAGCGTATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCCACATCCAAGGTGCCTTAAATCGTTTCTTATGCTGATACGACTCTGATCTTAGTTTCAGTGGATTGAATCATATAAATAATTCTTTGGAAAAGAATCCAATAAAATTAAAAAAATGACCTGTCTATATGTTATCGACCAGTTGCAGGTTTTGATTTCATCTCATGGTTCTTACCATATATTTAAAATATATTCAACAAACTTGTTTGCCTCTCTCATACACATACTTCTATAAAATGAATGGAAAATAGAGGATACAATATACCCTTATTGGTTGTATGATGATAGGCTACTTTTCCAAGGGCTAGGGTTGGTTAGAGCTTCCCTCTTCAATCGAGGGGCATAATCCTAAGTTGAAAATTTGATCAATCAGAGGGTGTTTGGGCCACCAACTTCAAGTTGGTGGAGTGGACTATGTTTGGAGCTCCAATTATAATAGTTGGTATTTTCAATTATTATAACCTACAATTAACTAGAATATTATTATTTCAAATCCCTCTTTGTTGTAGTGTTTACTATTTCCTACTCATCTTATCTTTCCCTCTTTGTTACTATGTTTACTATTTCTTATATAGACTAAAATAATCTGGACTCCAAATACAGATTATAATAACCACTAATTATAATGACTAAGACTAACTTAGCGTCCTAAATATCCCCGCGAAGTTCTTGTTCTCTCTTAAAGCTGGCCTTGGAGCAAGTGAAACCTCTTAAGAGAATCAATAGGGTTGATAATGTAATTGTGGTAGAAGGAAATTGCAATCCTTTCCTTAGTGTTCCCTGTTAATGATTTTTTTTTATAACAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGCTACGTCGTGCCGTTGCTTCTGGCTGCCTCATTTGCTGGAGCATTGCAGGTATTGTGGTTATAGTAGGAAGAACTTACCTGCATATCGATATTTTGTTTGCAATGCAGTATAAGTTTATCAGGTGACTTATCAAAAGTTTTCCCCTATGTTATTTTCGACACTTTAGTTCATTGTAGACTGTAATCTCGTGTTTTGTTGTCTAATTGACTCTTGCATGCCTGCAGAGCCTTCTGTCGTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGGTAATTCCTTTAAACTCATCCTCACACCAATAAGATAACAGATAGATAAATATGTTTAATTTCAAAAGATTGGCCGTTGAACACAAGAAAAAAACATGAGGTTCAACTTCAAAACACAATCAATGATATTTTCTACAAATGCATATAAGAAATGTCACTCTTCTCAAAATTATTCTAAACTCACTGAAAACACATCCAAACAGTCAATTACATGTTAAAAGCATGTAGTTAATATAAATAAATTTACTGTCACTGGTTAGCCTAAGTTTTTGAGTTGGATTGTTGATTGACAGTTTGAAACTCGATTTGTTTGACTTCAGAATTTTGAAATAAGATGTTTGAAATGGGATTTGTTTGTTGTTTGATGCATGCAGTGGTGCATTACTGTTGAGTGGAGGTATTTATACATTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAAAGATATAACAAATGCTTACAAACTCCTTAGATAAATGATGAGGTTATAATGTTGCTCTCATTCAATGGCCCATATATTTCTGTGTTTCTTTTGGCTTCACTCTCTTTAATTTTATGTGGATAAGATCAACCGCCATAAATA

mRNA sequence

GCCAGAATCACTCTCTAACTTTCGTTACTTTCTTCTTCTTCGTGTTTGTGGGCAGAAGAAATCTTTGGCAACTACCAACTTCTCCACTACCTCTGCTCTCTATTCCAGATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCCGCATCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACTGCCCAACACGCCAGGTAAATATGTCGTGCCTATGAAATTTCTTGGGAGAAAATCCGCAGCTGATGATCAAAATAAAGATGTTGAGTTGGTGGAGATTAAAAACAGCAGCAATTATTTTCAAGCCATGGCTTTTGTAAATGCCATTTCTGCGACAAGTTTCCTTGCAGTAGATGCCGCGAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTGTCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGTCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCCGTTGCTTTCTCATTAGGACTTGCTACGACCCTGGCGCTGTTAGGTATAGCAGCTTCTTTTGCTGGCAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCTTAAACCTACTGGAGATAATTGAGTTGCGACTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCAGCTGCCAGCTTTCCATCAAGTGTGCAAGCGTATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCCACATCCAAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGCTACGTCGTGCCGTTGCTTCTGGCTGCCTCATTTGCTGGAGCATTGCAGAGCCTTCTGTCGTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGTGCATTACTGTTGAGTGGAGGTATTTATACATTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAAAGATATAACAAATGCTTACAAACTCCTTAGATAAATGATGAGGTTATAATGTTGCTCTCATTCAATGGCCCATATATTTCTGTGTTTCTTTTGGCTTCACTCTCTTTAATTTTATGTGGATAAGATCAACCGCCATAAATA

Coding sequence (CDS)

ATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCCGCATCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACTGCCCAACACGCCAGGTAAATATGTCGTGCCTATGAAATTTCTTGGGAGAAAATCCGCAGCTGATGATCAAAATAAAGATGTTGAGTTGGTGGAGATTAAAAACAGCAGCAATTATTTTCAAGCCATGGCTTTTGTAAATGCCATTTCTGCGACAAGTTTCCTTGCAGTAGATGCCGCGAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTGTCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGTCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCCGTTGCTTTCTCATTAGGACTTGCTACGACCCTGGCGCTGTTAGGTATAGCAGCTTCTTTTGCTGGCAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCTTAAACCTACTGGAGATAATTGAGTTGCGACTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCAGCTGCCAGCTTTCCATCAAGTGTGCAAGCGTATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCCACATCCAAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGCTACGTCGTGCCGTTGCTTCTGGCTGCCTCATTTGCTGGAGCATTGCAGAGCCTTCTGTCGTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGTGCATTACTGTTGAGTGGAGGTATTTATACATTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAA

Protein sequence

MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKNSSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM

Homology

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BLAST of CmUC10G188360 vs. NCBI nr
Match: XP_038903027.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Benincasa hispida])

HSP 1 Score: 641.7 bits (1654), Expect = 3.7e-180
Identity = 339/359 (94.43%), Postives = 352/359 (98.05%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKN 60
           MSLLMSHSGGF INS KI +SKRLQ  +TPGKYV+P+KFLGR+SAADDQ+KD+ELVE KN
Sbjct: 1   MSLLMSHSGGFSINSFKIKSSKRLQQSSTPGKYVMPIKFLGRQSAADDQSKDIELVENKN 60

Query: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAA+VYTLADGGIGDWFGGFLYSAG
Sbjct: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAAAVYTLADGGIGDWFGGFLYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+AEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240
           NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240

Query: 241 FDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           FDNFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLAT+LGYVATSKDP+IGGSLLLT
Sbjct: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATILGYVATSKDPIIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CmUC10G188360 vs. NCBI nr
Match: TYK03271.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 636.3 bits (1640), Expect = 1.6e-178
Identity = 339/359 (94.43%), Postives = 351/359 (97.77%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+SAADDQ KD+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           S NYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CmUC10G188360 vs. NCBI nr
Match: XP_008452288.1 (PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo])

HSP 1 Score: 634.8 bits (1636), Expect = 4.5e-178
Identity = 338/359 (94.15%), Postives = 351/359 (97.77%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+SAADDQ +D+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCEDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           S NYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CmUC10G188360 vs. NCBI nr
Match: XP_038903026.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Benincasa hispida])

HSP 1 Score: 634.8 bits (1636), Expect = 4.5e-178
Identity = 339/366 (92.62%), Postives = 352/366 (96.17%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKN 60
           MSLLMSHSGGF INS KI +SKRLQ  +TPGKYV+P+KFLGR+SAADDQ+KD+ELVE KN
Sbjct: 1   MSLLMSHSGGFSINSFKIKSSKRLQQSSTPGKYVMPIKFLGRQSAADDQSKDIELVENKN 60

Query: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMW-------EGAASVYTLADGGIGDWFG 120
           SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMW       EGAA+VYTLADGGIGDWFG
Sbjct: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWNYFPSSQEGAAAVYTLADGGIGDWFG 120

Query: 121 GFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGK 180
           GFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGK
Sbjct: 121 GFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGK 180

Query: 181 SKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEII 240
           S+AEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEII
Sbjct: 181 SRAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEII 240

Query: 241 ELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVI 300
           ELRLPSFFDNFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLAT+LGYVATSKDP+I
Sbjct: 241 ELRLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATILGYVATSKDPII 300

Query: 301 GGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLF 360
           GGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLF
Sbjct: 301 GGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRLF 360

[Close]

BLAST of CmUC10G188360 vs. NCBI nr
Match: XP_011650559.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X4 [Cucumis sativus] >KGN56224.2 hypothetical protein Csa_010801 [Cucumis sativus])

HSP 1 Score: 611.7 bits (1576), Expect = 4.1e-171
Identity = 328/359 (91.36%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKN 60
           MS L+S+SG F INSI+ISTSK    PNTPGK+V+PMKFLG +S ADDQ K +ELV+ +N
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKH---PNTPGKHVMPMKFLGTQSVADDQCKHIELVKNRN 60

Query: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           S NYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 356

[Close]

BLAST of CmUC10G188360 vs. ExPASy Swiss-Prot
Match: Q2QY07 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA2 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 4.2e-118
Identity = 226/283 (79.86%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 74  ISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSA 133
           ++  S +A  AA A  +     G++ +  LAD  IGDWFG  LYSAGQQAN AVQDQLSA
Sbjct: 77  VAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSA 136

Query: 134 LSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTL 193
           LSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFSLGLATTL
Sbjct: 137 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTL 196

Query: 194 ALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASF 253
           A+LG+AASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IEL+LPSFF ++DPR+AAA+ 
Sbjct: 197 AILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANL 256

Query: 254 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAA 313
           PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGYV PLL+AA
Sbjct: 257 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAA 316

Query: 314 SFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVT 357
           SFAGALQSLLSFR++S+WINPISGA LL GG+YT LDRLFP T
Sbjct: 317 SFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 358

[Close]

BLAST of CmUC10G188360 vs. ExPASy Swiss-Prot
Match: Q2RAR6 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA1 PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 5.5e-118
Identity = 225/283 (79.51%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 74  ISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSA 133
           ++  S +A  AA A  +     G++ +  LAD  +GDWFG  LYSAGQQAN AVQDQLSA
Sbjct: 82  VAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSVGDWFGNLLYSAGQQANEAVQDQLSA 141

Query: 134 LSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTL 193
           LSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFSLGLATTL
Sbjct: 142 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTL 201

Query: 194 ALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASF 253
           A+LG+AASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IEL+LPSFF ++DPR+AAA+ 
Sbjct: 202 AILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANL 261

Query: 254 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAA 313
           PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGYV PLL+AA
Sbjct: 262 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAA 321

Query: 314 SFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVT 357
           SFAGALQSLLSFR++S+WINPISGA LL GG+YT LDRLFP T
Sbjct: 322 SFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 363

[Close]

BLAST of CmUC10G188360 vs. ExPASy Swiss-Prot
Match: Q9M5P3 (Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thaliana OX=3702 GN=CCDA PE=1 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.6e-117
Identity = 229/290 (78.97%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 72  NAISATSFLAVDAAKAETLKH-MWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQ 131
           + +   + + + +AKA  LK  + + A S+Y LA+G +GD  G FLYSA QQAN AVQDQ
Sbjct: 65  SGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQ 124

Query: 132 LSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLA 191
           LSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLA
Sbjct: 125 LSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLA 184

Query: 192 TTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAA 251
           TTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIEL+LPSFF+NFDPR+AA
Sbjct: 185 TTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAA 244

Query: 252 ASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLL 311
           A+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL+
Sbjct: 245 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLI 304

Query: 312 LAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFP-VTMAM 360
           +AASFAGALQSLLS RK S+WINPISGALLL GG+YTFLDRLFP  TM M
Sbjct: 305 VAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354

[Close]

BLAST of CmUC10G188360 vs. ExPASy Swiss-Prot
Match: P51364 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=2787 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.6e-23
Identity = 70/237 (29.54%), Postives = 126/237 (53.16%), Query Frame = 0


Query: 116 LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSK 175
           LY++    N     QL+ ++  S + +F +G  TS SPC +S+LP+ + YI   G   S+
Sbjct: 7   LYNSQHLINNITLYQLNHINIASFSFVFFSGLFTSFSPCLISILPICIMYISGEGQKLSQ 66

Query: 176 AEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL 235
            + + N   F LG  ++   LG+ A+   K Y Q+  G+P+ ++ + + MG +LL I+  
Sbjct: 67  IDKLKNLFFFCLGAISSFTTLGLIATLLAKTYSQLFNGIPVISALVIIYMGFSLLNIV-- 126

Query: 236 RLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGG 295
             P   +N + R    +   +++ YL+G+   LA S CSTP+  TLL +V ++ +  IG 
Sbjct: 127 --PLSTNNLNTRINNTN--QNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIGL 186

Query: 296 SLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRL 353
             +L Y+ GY+ P+++ + F+    +  S    ++   P SG +LLS G ++    +
Sbjct: 187 IFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFSLFSSI 237

[Close]

BLAST of CmUC10G188360 vs. ExPASy Swiss-Prot
Match: Q1XDC3 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=2788 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.6e-19
Identity = 64/208 (30.77%), Postives = 107/208 (51.44%), Query Frame = 0


Query: 115 FLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 174
           F+Y++    N     QL+ L+ TS + IF +G  TSLSPC +S+LP+ + YI       +
Sbjct: 6   FVYNSQHFVNNITLYQLNHLNSTSFSFIFLSGLFTSLSPCIISILPVCILYIAGETQKLN 65

Query: 175 KAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 234
                 N   F LG  ++   LGI A+   K Y Q   G+P  ++ + + MGLNLL I+ 
Sbjct: 66  PINKTKNLFLFCLGTISSFITLGILATLITKTYSQFFNGIPTISAVVIIYMGLNLLNIVH 125

Query: 235 LRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 294
           +  P F           +   + + YL+G+   +A S CSTP+  TLL ++ +++    G
Sbjct: 126 INSPKF------NGLVTNNNYNFKMYLSGVGIGIAISSCSTPIFVTLLVWINSTQKIFTG 185

Query: 295 GSLLLTYTTGYVVPLLLAASFAGALQSL 323
              +L Y+ GY+ P+++ + F+ +   L
Sbjct: 186 LIFILIYSIGYIFPIIIGSIFSTSFLKL 207

[Close]

BLAST of CmUC10G188360 vs. ExPASy TrEMBL
Match: A0A5D3BU70 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00980 PE=3 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.5e-179
Identity = 339/359 (94.43%), Postives = 351/359 (97.77%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+SAADDQ KD+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           S NYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CmUC10G188360 vs. ExPASy TrEMBL
Match: A0A1S3BSW3 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493358 PE=3 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.2e-178
Identity = 338/359 (94.15%), Postives = 351/359 (97.77%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+SAADDQ +D+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCEDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           S NYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CmUC10G188360 vs. ExPASy TrEMBL
Match: A0A5A7TZQ7 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00300 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.3e-170
Identity = 329/359 (91.64%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+SAADDQ KD+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           S NYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYI  +    S  +VVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIVNWNI-SSYFQVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 358

[Close]

BLAST of CmUC10G188360 vs. ExPASy TrEMBL
Match: A0A6J1JAT1 (cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita maxima OX=3661 GN=LOC111483292 PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.7e-170
Identity = 327/360 (90.83%), Postives = 342/360 (95.00%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSAADDQNKDV-ELVEIK 60
           M  LM+HSGGF INSIKISTSKRL L   PGKYV P+ FLG +SAA DQ KD+ E VE  
Sbjct: 1   MGFLMTHSGGFGINSIKISTSKRL-LGRPPGKYVAPLNFLGGQSAALDQTKDIDEFVEST 60

Query: 61  NSSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSA 120
           NSSN+F AMAFVNAISATSFLAVDAAKAE+L+HMWEGAASVYTLADGGIGDWFGGFLYSA
Sbjct: 61  NSSNHFHAMAFVNAISATSFLAVDAAKAESLEHMWEGAASVYTLADGGIGDWFGGFLYSA 120

Query: 121 GQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVV 180
           GQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+AEVV
Sbjct: 121 GQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVV 180

Query: 181 GNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPS 240
           GNSVAF+LGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPS
Sbjct: 181 GNSVAFALGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPS 240

Query: 241 FFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLL 300
           FFDNFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP++GGSLLL
Sbjct: 241 FFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIVGGSLLL 300

Query: 301 TYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 360
           TYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+Y+FLDRLFPVTMAM
Sbjct: 301 TYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYSFLDRLFPVTMAM 359

[Close]

BLAST of CmUC10G188360 vs. ExPASy TrEMBL
Match: A0A0A0L5A0 (DsbD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099700 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.9e-169
Identity = 328/365 (89.86%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTP------GKYVVPMKFLGRKSAADDQNKDVE 60
           MS L+S+SG F INSI+ISTSK    PNTP      GK+V+PMKFLG +S ADDQ K +E
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKH---PNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIE 60

Query: 61  LVEIKNSSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGG 120
           LV+ +NS NYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGG+GDWFGG
Sbjct: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 FLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
            LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
           KAEVVGNSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300
           L+LPSFF+NFDPRSAAA+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP 360

[Close]

BLAST of CmUC10G188360 vs. TAIR 10
Match: AT5G54290.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 424.1 bits (1089), Expect = 1.1e-118
Identity = 229/290 (78.97%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 72  NAISATSFLAVDAAKAETLKH-MWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQ 131
           + +   + + + +AKA  LK  + + A S+Y LA+G +GD  G FLYSA QQAN AVQDQ
Sbjct: 65  SGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQ 124

Query: 132 LSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLA 191
           LSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLA
Sbjct: 125 LSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLA 184

Query: 192 TTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAA 251
           TTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIEL+LPSFF+NFDPR+AA
Sbjct: 185 TTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAA 244

Query: 252 ASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLL 311
           A+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL+
Sbjct: 245 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLI 304

Query: 312 LAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFP-VTMAM 360
           +AASFAGALQSLLS RK S+WINPISGALLL GG+YTFLDRLFP  TM M
Sbjct: 305 VAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354

[Close]

BLAST of CmUC10G188360 vs. TAIR 10
Match: AT5G54290.2 (cytochrome c biogenesis protein family )

HSP 1 Score: 424.1 bits (1089), Expect = 1.1e-118
Identity = 229/290 (78.97%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 72  NAISATSFLAVDAAKAETLKH-MWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQ 131
           + +   + + + +AKA  LK  + + A S+Y LA+G +GD  G FLYSA QQAN AVQDQ
Sbjct: 66  SGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQ 125

Query: 132 LSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLA 191
           LSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLA
Sbjct: 126 LSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLA 185

Query: 192 TTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAA 251
           TTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIEL+LPSFF+NFDPR+AA
Sbjct: 186 TTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAA 245

Query: 252 ASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLL 311
           A+FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL+
Sbjct: 246 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLI 305

Query: 312 LAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFP-VTMAM 360
           +AASFAGALQSLLS RK S+WINPISGALLL GG+YTFLDRLFP  TM M
Sbjct: 306 VAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 355

The following BLAST results are available for this feature:

BLAST of CmUC10G188360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903027.1	3.7e-180	94.43	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Beninca...	[more]
TYK03271.1	1.6e-178	94.43	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis...	[more]
XP_008452288.1	4.5e-178	94.15	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform ...	[more]
XP_038903026.1	4.5e-178	92.62	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Beninca...	[more]
XP_011650559.1	4.1e-171	91.36	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X4 [Cucumis...	[more]

BLAST of CmUC10G188360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QY07	4.2e-118	79.86	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa s...	[more]
Q2RAR6	5.5e-118	79.51	Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa s...	[more]
Q9M5P3	1.6e-117	78.97	Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thal...	[more]
P51364	6.6e-23	29.54	Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=...	[more]
Q1XDC3	2.6e-19	30.77	Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=...	[more]

BLAST of CmUC10G188360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BU70	7.5e-179	94.43	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A1S3BSW3	2.2e-178	94.15	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A5A7TZQ7	1.3e-170	91.64	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A6J1JAT1	3.7e-170	90.83	cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita maxima...	[more]
A0A0A0L5A0	1.9e-169	89.86	DsbD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099700 PE=3 S...	[more]

BLAST of CmUC10G188360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54290.1	1.1e-118	78.97	cytochrome c biogenesis protein family	[more]
AT5G54290.2	1.1e-118	78.97	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003834	Cytochrome C biogenesis protein, transmembrane domain	PFAM	PF02683	DsbD	coord: 142..349 e-value: 1.7E-44 score: 152.3
None	No IPR available	PANTHER	PTHR31272	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	coord: 61..359
None	No IPR available	PANTHER	PTHR31272:SF6	CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN	coord: 61..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G188360.1	CmUC10G188360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0017004	cytochrome complex assembly
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane