CmUC10G187400 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G187400
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	protein translation factor SUI1 homolog
Location	CmU531Chr10: 5992079 .. 5995109 (-)
RNA-Seq Expression	CmUC10G187400
Synteny	CmUC10G187400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCCTCTCACAACTTCAACATAGGTTCCTGAAGATTTTTGCCAGAGAACATTTTTTTTTTTTTTTACTGGTGAATTGGACAAACCGACTACATCTTCACAACCCCTATTTGTATCCCTCGGCAGCCCAACCGTGCTTTCTTACTAATAGACAACTTCTCCCACTAAACTTGCCAAACTTCTTCTTAATTTGCCACCTAAGCACACATTAAAATATTAAGAAAATAATCAATTAAAAACTTAAAGAATTAAATACCTCAACTCTCGACTACTGCCTTTTCAACGCCTAGACTTCTCTTCTAGCCCACTTCTTTCCTCACTCGAGTTCAACGCCTAGCTCAAGCCCTATTGCCACCAAATTCGTCTAAGTCAACTATTACTAACTTATAATTCAAATAACAATGAGAAAAAGTTGAGGGCTTACAATATTTCTCCTAAAAAAATGAAAAATTGCCTTTTTAGTCCCCAAATTTTGAATAATATGTGCCTTTGGTCCCTAAGTTTTAAAAATGTACCTTTTTAGTCCCCAAGTTTTGAACAATATGTGTGTTTAGTTCCTGAGTTTTAAAAATGTACCTTTTTAGCCCCCAAGTTTATAAGAATGGATCCATTTGGTTCCTAAGTTTTCAAAATATACATTTCAGTTCCTAAGTTTTTAAAAATAGATTTAAAAGGTCCTTCAATTTTTTTAAAAATAATTATATGATATTTAAAATTAGAAAAAAAAAAGTTTTAAATAGGAGATGGTTTTTAAAAATTATTCTTCTACTTTAATGGCATATAATTATTTAAAATAATAATAAAAAATTATTTGATGGACTTTTTAATCCTATTTTTAAAAACTTAGGGACTGAAAAGTTACATTTTGAAAATATAGAGACTAAATAGGTTTATTCTTATAAACTTGAGGACTAAAAGGATACATTTTTTAAATTTAGGAATCAAACGCACATATTATTTAAAACTTGGGATTAAAAAGGTACAATTTTTTAAACTCAAAGACCAAATACACATATTATCAAAACGTGTAGACTAAAAAAATAATTTTTCTTTAAAGAAAAAAAAAACATACAACGTACAAGCAATCCTTTTCATTTTAAAAAATTCCCATAAGCGTCGTGTGTGGATTGGAGTGTTCGGTGCGTTCATTGTACGCGTCCCTTATGATGAATAAGGATTCCCTTTTCCACATCGAGAATATGTTATCCAGATAACCATACACCTCCAAATCATCGTGGCCGTATATCCTTCCCAACAAAACTCCATCCTCACCGTCCATTCTCACAAACACCCACCTCTATATAAACTCTCCTCAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGGTACAATTCTCCTCTTCTTCTTCCTTTTCAATTTTTCAATCTATTACTCTCTTTCTGGTTTCTGTATTATGTGATTGTTTGTTTTTTCTGTTCAGTCTTGAATTTTGATCTTCGTAATTGATCACTGTTTGTTCGCTGAGGAGTCTACTTCTTGCTGTTTTCCCTGAGTTTGTTTGTTTGTTGAGGAGTCTACTTCTGTATTATGTGATGCTTTTGAATGTGGGAATTCATCTCGATCACAAATTTTACTGATATCTAAAGTATTCTAATCTTATGAGAAACATCCTTTTGGGTTAAATCTTATTTTTCGTCTTTGGTCTATGAACTTTCAACTTGTCTGTTCTTTCGACCATTCTTTTTAATCTCTTGGTTTCGTTAAAGTATTGGTTATAGTTAAATTTACCATGTTTATGTTATATGAATAATATCCAATAATATCATAACTTTTAAAATGGAATGAAAGCTTTATGAGAGAAGAACGAAGACTGTTGATGGAAAGGCTAAGTTTTAATTTGGAGAAGAGACATATTTATAAACTAATTCATTGTTGTGTTTCTTCCTTAAGTTGGTTAATAATTGAAAAGATGCACTCATGGAATTGAAAAGATGCAACCCTAAAGGAAGATTCATATACCATTTATTCCAACCGTTTAAGCTTTTGGGTGGATGAGATCATGTGTTCAAACCTCTATAGTTGGAATTTCATTTCCTCACAATTAATACTGATTTGATTTCTACTTATTGGCCTTCTACAAATTTTCAAGACCAAAGATATAAGCCCATCAAGCTTTTAGTGATTTAACAAATCTTTCCTTCATCGTTTCTAAATTGATTTGGAAATTTGATAGCTAACTGATGACAAGTGGTCTCTAATATTTATCTTCTTATACATTTTTTGATCAGCTAAGTAAATAAAAAATGCGTTAGTGTCAAGTTTCTACTGTATAATTTCCTGAAAAATTAAGAGTAAGGACTGGTTTTATTTTTAAAATTTGGGGATTAAAATAGAATTATTGAAAGCTTAGGCATCCAAATTGAATAAGCATGAAGTCTGGGATTAGAATACAATACGAACCAATATTTTATCTTGAATTACTGGTTCACCCGTTTCCATCAAGAAAACTACATTGCATGGTTTCCCACATTCTTTTTGACTTATCAGTTTTAAAATATATTTTCTCTATCAACCAAAGTATCTGCTGATGACCAATCTTGCTGGTTAAACTTTCAAAGGTGAATGTTAAATAATTTTTTTCTTTATGTGGGTGTTGGAAACAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA

mRNA sequence

ATGGCAGCCCTCTCACAACTTCAACATAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA

Coding sequence (CDS)

ATGGCAGCCCTCTCACAACTTCAACATAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA

Protein sequence

MAALSQLQHSLLILLKLSIFAFCFDFSFSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF

Homology

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BLAST of CmUC10G187400 vs. NCBI nr
Match: XP_016903023.1 (PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >XP_031739416.1 protein translation factor SUI1 homolog 2 [Cucumis sativus] >KAA0033974.1 SUI1 domain-containing protein [Cucumis melo var. makuwa] >KGN56126.1 hypothetical protein Csa_011317 [Cucumis sativus] >TYK02572.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 3.2e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CmUC10G187400 vs. NCBI nr
Match: XP_038903171.1 (protein translation factor SUI1 homolog 2-like [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 7.1e-56
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIP+AFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPTAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CmUC10G187400 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 3.5e-55
Identity = 108/116 (93.10%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 38  QANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYD 97
           Q+ +MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+
Sbjct: 35  QSRFMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYE 94

Query: 98  KILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 95  KILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

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BLAST of CmUC10G187400 vs. NCBI nr
Match: PON51499.1 (Eukaryotic translation initiation factor SUI [Parasponia andersonii])

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 107/128 (83.59%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 27  SFSFLGAFRY-HQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLT 86
           +F+F+ +F++  QA YMV+LD+Q+PSAFDPFA+AKDSDAPG KEYVHIRVQQRNGKKCLT
Sbjct: 19  NFAFVASFQFSKQAKYMVELDVQLPSAFDPFAEAKDSDAPGAKEYVHIRVQQRNGKKCLT 78

Query: 87  TVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK 146
           TVQGLK+E+SY+KILKDLKK FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQAGLVKK
Sbjct: 79  TVQGLKQEYSYEKILKDLKKVFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQAGLVKK 138

Query: 147 DQIKIHGF 154
           D IKIHGF
Sbjct: 139 DHIKIHGF 146

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BLAST of CmUC10G187400 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CmUC10G187400 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-46
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M DL++Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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BLAST of CmUC10G187400 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-46
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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BLAST of CmUC10G187400 vs. ExPASy Swiss-Prot
Match: O82569 (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa OX=45043 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.9e-46
Identity = 90/113 (79.65%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPG-TKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           MVD DIQIP++FDPFA+A+ +DA G TKEYVHIR+QQRNG+K LTTVQGLKKE SYDKIL
Sbjct: 1   MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK  CCNG VV DKELGK+IQLQGDQRKNVS F+VQAG+VKKDQIK+H F
Sbjct: 61  KDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113

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BLAST of CmUC10G187400 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.0e-46
Identity = 89/115 (77.39%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 101
           M DLDIQIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 102 ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of CmUC10G187400 vs. ExPASy Swiss-Prot
Match: Q0D5W6 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GOS2 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.0e-46
Identity = 89/115 (77.39%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 101
           M DLDIQIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 102 ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of CmUC10G187400 vs. ExPASy TrEMBL
Match: A0A5D3BUS5 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00240 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CmUC10G187400 vs. ExPASy TrEMBL
Match: A0A0A0L7M8 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CmUC10G187400 vs. ExPASy TrEMBL
Match: A0A1S4E468 (protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC103501585 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CmUC10G187400 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 108/116 (93.10%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 38  QANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYD 97
           Q+ +MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+
Sbjct: 35  QSRFMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYE 94

Query: 98  KILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 95  KILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of CmUC10G187400 vs. ExPASy TrEMBL
Match: A0A2P5BRS0 (Eukaryotic translation initiation factor SUI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_215810 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 107/128 (83.59%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 27  SFSFLGAFRY-HQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLT 86
           +F+F+ +F++  QA YMV+LD+Q+PSAFDPFA+AKDSDAPG KEYVHIRVQQRNGKKCLT
Sbjct: 19  NFAFVASFQFSKQAKYMVELDVQLPSAFDPFAEAKDSDAPGAKEYVHIRVQQRNGKKCLT 78

Query: 87  TVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK 146
           TVQGLK+E+SY+KILKDLKK FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQAGLVKK
Sbjct: 79  TVQGLKQEYSYEKILKDLKKVFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQAGLVKK 138

Query: 147 DQIKIHGF 154
           D IKIHGF
Sbjct: 139 DHIKIHGF 146

[Close]

BLAST of CmUC10G187400 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 204.9 bits (520), Expect = 4.6e-53
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MV+LDIQIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of CmUC10G187400 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 204.9 bits (520), Expect = 4.6e-53
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MV+LDIQIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of CmUC10G187400 vs. TAIR 10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 187.6 bits (475), Expect = 7.6e-48
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M DL++Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CmUC10G187400 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 3.8e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CmUC10G187400 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 184.9 bits (468), Expect = 4.9e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of CmUC10G187400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903023.1	3.2e-56	99.11	PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >XP_03173941...	[more]
XP_038903171.1	7.1e-56	98.21	protein translation factor SUI1 homolog 2-like [Benincasa hispida]	[more]
KAA0025154.1	3.5e-55	93.10	SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai...	[more]
PON51499.1	3.9e-54	83.59	Eukaryotic translation initiation factor SUI [Parasponia andersonii]	[more]
XP_004139787.1	3.9e-54	95.54	protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PRED...	[more]

BLAST of CmUC10G187400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JV4	1.1e-46	80.53	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P41568	5.3e-46	80.53	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
O82569	6.9e-46	79.65	Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa OX=45043 PE=3 ...	[more]
A6MZM2	9.0e-46	77.39	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]
Q0D5W6	9.0e-46	77.39	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of CmUC10G187400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUS5	1.5e-56	99.11	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L7M8	1.5e-56	99.11	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=3 S...	[more]
A0A1S4E468	1.5e-56	99.11	protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC10350158...	[more]
A0A5D3DHR8	1.7e-55	93.10	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A2P5BRS0	1.9e-54	83.59	Eukaryotic translation initiation factor SUI OS=Parasponia andersonii OX=3476 GN...	[more]

BLAST of CmUC10G187400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54940.1	4.6e-53	86.61	Translation initiation factor SUI1 family protein	[more]
AT5G54940.2	4.6e-53	86.61	Translation initiation factor SUI1 family protein	[more]
AT1G54290.1	7.6e-48	80.53	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	3.8e-47	80.53	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	4.9e-47	80.53	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 46..153 e-value: 8.5E-53 score: 175.6
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 69..152 e-value: 3.26102E-50 score: 153.845
None	No IPR available	GENE3D	3.30.780.10		coord: 32..153 e-value: 1.6E-46 score: 159.7
None	No IPR available	PANTHER	PTHR10388:SF56	BNAA10G09260D PROTEIN	coord: 42..153
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 42..153
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 68..142 e-value: 2.5E-24 score: 85.5
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 71..141 score: 23.002235
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 40..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G187400.1	CmUC10G187400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity