CmUC10G186170 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G186170
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	serine-rich protein-related
Location	CmU531Chr10: 4586133 .. 4586699 (+)
RNA-Seq Expression	CmUC10G186170
Synteny	CmUC10G186170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCAAATCCCTAATCCAAACTCTTCTGTTCCAATTCTCAGAGGGAACCAGAACAGAACGCCCACCAGAGAAATCCGCCATTGAAGCTTCTCCTCTGCCGTCTCCCCCATCTCTTCCGGCAGTCGCAAATCCAGACAACACTCCCCGGCCGCCCATCACCGATGTGATCGCGTCACCGGCCTCTAACCTAAAACAGAAAAATAAAAAAAGCCCTAATTAATCCTCCTCCACACATTTTCCACCGGATAATAGCAAAATGTATTCAATCAGAGCAGAGCCGAAACAAACGAAGACGAATTGCAAGACACCGACCTCGAAAACCGCGGTGGCGGAATCGGAACTCGACGATCTGAAGAAGACAGCGCATATGCTAATGTCTCCGACGGCGTTGTCGAGGATGACGAAGTCGCCGAGCGTTAAATTGAATTGCCTCTGTTCTCCGACCACTCACATTGGATCTTTCCGGTGCCGACGCCACCGGAGCGCCGCTATCTCCCGCGGCGGTTCCGTCGGCTCCAATCTCTCCGATCTGGCTCAGAAATCAGGGGCGATGGACGATTAA

mRNA sequence

ATGTCTTCCAAATCCCTAATCCAAACTCTTCTGTTCCAATTCTCAGAGGGAACCAGAACAGAACGCCCACCAGAGAAATCCGCCATTGAAGCTTCTCCTCTGCCGTCTCCCCCATCTCTTCCGGCAGTCGCAAATCCAGACAACACTCCCCGGCCGCCCATCACCGATGTGATCGCAGCAGAGCCGAAACAAACGAAGACGAATTGCAAGACACCGACCTCGAAAACCGCGGTGGCGGAATCGGAACTCGACGATCTGAAGAAGACAGCGCATATGCTAATGTCTCCGACGGCGTTGTCGAGGATGACGAAGTCGCCGAGCGTTAAATTGAATTGCCTCTGTTCTCCGACCACTCACATTGGATCTTTCCGGTGCCGACGCCACCGGAGCGCCGCTATCTCCCGCGGCGGTTCCGTCGGCTCCAATCTCTCCGATCTGGCTCAGAAATCAGGGGCGATGGACGATTAA

Coding sequence (CDS)

ATGTCTTCCAAATCCCTAATCCAAACTCTTCTGTTCCAATTCTCAGAGGGAACCAGAACAGAACGCCCACCAGAGAAATCCGCCATTGAAGCTTCTCCTCTGCCGTCTCCCCCATCTCTTCCGGCAGTCGCAAATCCAGACAACACTCCCCGGCCGCCCATCACCGATGTGATCGCAGCAGAGCCGAAACAAACGAAGACGAATTGCAAGACACCGACCTCGAAAACCGCGGTGGCGGAATCGGAACTCGACGATCTGAAGAAGACAGCGCATATGCTAATGTCTCCGACGGCGTTGTCGAGGATGACGAAGTCGCCGAGCGTTAAATTGAATTGCCTCTGTTCTCCGACCACTCACATTGGATCTTTCCGGTGCCGACGCCACCGGAGCGCCGCTATCTCCCGCGGCGGTTCCGTCGGCTCCAATCTCTCCGATCTGGCTCAGAAATCAGGGGCGATGGACGATTAA

Protein sequence

MSSKSLIQTLLFQFSEGTRTERPPEKSAIEASPLPSPPSLPAVANPDNTPRPPITDVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

Homology

[Close]

BLAST of CmUC10G186170 vs. NCBI nr
Match: KGN55991.1 (hypothetical protein Csa_011649 [Cucumis sativus])

HSP 1 Score: 158.3 bits (399), Expect = 5.3e-35
Identity = 80/100 (80.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 56  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCS 115
           D I  +PKQTKTNCKTPTSK+A+ E+E DDLKK A++LMSPTALSRMTKS S+K NCLCS
Sbjct: 2   DPIRTQPKQTKTNCKTPTSKSAMVETEFDDLKKNANLLMSPTALSRMTKSRSIKSNCLCS 61

Query: 116 PTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           PTTHIGSFRCRRHRS +ISRGGSVGSNLSDL QKS AM+D
Sbjct: 62  PTTHIGSFRCRRHRSTSISRGGSVGSNLSDLVQKSEAMED 101

[Close]

BLAST of CmUC10G186170 vs. NCBI nr
Match: TYK19387.1 (putative PGPS/D10 protein [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 9.1e-35
Identity = 79/100 (79.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 56  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCS 115
           D I  + KQTKTNCKTPTSK+A+ E+E DDLKK AH+LMSPTALSRMTKSPS+K NCLCS
Sbjct: 2   DPIRTDSKQTKTNCKTPTSKSAMVETEFDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCS 61

Query: 116 PTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           PTTHIGSFRCRRHRS A+SRG SVGSNLSDL QKS  M+D
Sbjct: 62  PTTHIGSFRCRRHRSTAMSRGASVGSNLSDLGQKSETMED 101

[Close]

BLAST of CmUC10G186170 vs. NCBI nr
Match: XP_022143490.1 (uncharacterized protein LOC111013367 [Momordica charantia])

HSP 1 Score: 152.5 bits (384), Expect = 2.9e-33
Identity = 78/101 (77.23%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 56  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAH-MLMSPTALSRMTKSPSVKLNCLC 115
           D + AEPKQ K NCKTPT+K+A+ E +LD+LKK++H ++MSPTALSRM+KSPS K NCLC
Sbjct: 2   DHVGAEPKQPKMNCKTPTAKSALPELDLDELKKSSHNLVMSPTALSRMSKSPSTKSNCLC 61

Query: 116 SPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           SPTTHIGSFRCRRHRS AISRGGSVGSNLSDLAQKS AM+D
Sbjct: 62  SPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSAAMED 102

[Close]

BLAST of CmUC10G186170 vs. NCBI nr
Match: KAG7015599.1 (hypothetical protein SDJN02_23235, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-22
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 58  IAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPT 117
           I+AEPKQ  TNC +PTSK+A  E ELDD KK A          +MT+SPS +  CLCSPT
Sbjct: 4   ISAEPKQVTTNCNSPTSKSAQPELELDDQKKNA----------QMTRSPSARSTCLCSPT 63

Query: 118 THIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           TH+GSFRCR HR  AISRGGS GSNLSDLAQKS A++D
Sbjct: 64  THVGSFRCRLHRGTAISRGGSEGSNLSDLAQKSAAVED 91

[Close]

BLAST of CmUC10G186170 vs. NCBI nr
Match: KAG6577543.1 (hypothetical protein SDJN03_25117, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-22
Identity = 63/98 (64.29%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 58  IAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPT 117
           I AEPKQ  TNC +PTSK+A  E ELDD KK A          +MT+SPS +  CLCSPT
Sbjct: 4   IIAEPKQVTTNCNSPTSKSAQPELELDDQKKNA----------QMTRSPSARSTCLCSPT 63

Query: 118 THIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           TH+GSFRCR HR  AISRGGS GSNLSDLAQKS A++D
Sbjct: 64  THVGSFRCRLHRGTAISRGGSEGSNLSDLAQKSAAVED 91

[Close]

BLAST of CmUC10G186170 vs. ExPASy TrEMBL
Match: A0A0A0L7C7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045050 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.6e-35
Identity = 80/100 (80.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 56  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCS 115
           D I  +PKQTKTNCKTPTSK+A+ E+E DDLKK A++LMSPTALSRMTKS S+K NCLCS
Sbjct: 2   DPIRTQPKQTKTNCKTPTSKSAMVETEFDDLKKNANLLMSPTALSRMTKSRSIKSNCLCS 61

Query: 116 PTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           PTTHIGSFRCRRHRS +ISRGGSVGSNLSDL QKS AM+D
Sbjct: 62  PTTHIGSFRCRRHRSTSISRGGSVGSNLSDLVQKSEAMED 101

[Close]

BLAST of CmUC10G186170 vs. ExPASy TrEMBL
Match: A0A5D3D753 (Putative PGPS/D10 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00180 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.4e-35
Identity = 79/100 (79.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 56  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCS 115
           D I  + KQTKTNCKTPTSK+A+ E+E DDLKK AH+LMSPTALSRMTKSPS+K NCLCS
Sbjct: 2   DPIRTDSKQTKTNCKTPTSKSAMVETEFDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCS 61

Query: 116 PTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           PTTHIGSFRCRRHRS A+SRG SVGSNLSDL QKS  M+D
Sbjct: 62  PTTHIGSFRCRRHRSTAMSRGASVGSNLSDLGQKSETMED 101

[Close]

BLAST of CmUC10G186170 vs. ExPASy TrEMBL
Match: A0A6J1CNY2 (uncharacterized protein LOC111013367 OS=Momordica charantia OX=3673 GN=LOC111013367 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 78/101 (77.23%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 56  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAH-MLMSPTALSRMTKSPSVKLNCLC 115
           D + AEPKQ K NCKTPT+K+A+ E +LD+LKK++H ++MSPTALSRM+KSPS K NCLC
Sbjct: 2   DHVGAEPKQPKMNCKTPTAKSALPELDLDELKKSSHNLVMSPTALSRMSKSPSTKSNCLC 61

Query: 116 SPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           SPTTHIGSFRCRRHRS AISRGGSVGSNLSDLAQKS AM+D
Sbjct: 62  SPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSAAMED 102

[Close]

BLAST of CmUC10G186170 vs. ExPASy TrEMBL
Match: A0A5N6L3X1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_026425 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-16
Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 61  EPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHI 120
           E K  K N K    K  + E  LDD+KK  H+L+SP+      K      NCLCSPTTH+
Sbjct: 5   EQKPPKINLKPVNPKINIPEINLDDIKKHPHLLVSPSLKETKAKQSGRWKNCLCSPTTHV 64

Query: 121 GSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           GSFRCR HR++++ RGGSVGS LS+LA KSGA+ D
Sbjct: 65  GSFRCRHHRNSSMHRGGSVGSKLSELAHKSGAVSD 99

[Close]

BLAST of CmUC10G186170 vs. ExPASy TrEMBL
Match: W9SBP1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_020205 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-16
Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 62  PKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIG 121
           P++ K N      K  + +  L++LKK  H+L SP A   +TKS S + NCLCSPTTH G
Sbjct: 10  PQKIKEN--NMNFKLKIPDINLNELKKQTHLLASPRAQRAVTKSSSTRWNCLCSPTTHAG 69

Query: 122 SFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD 156
           SFRCR HRS+ + RGGSVGSNLS+LA+K GA+ D
Sbjct: 70  SFRCRHHRSSCMLRGGSVGSNLSELARKPGAISD 101

[Close]

BLAST of CmUC10G186170 vs. TAIR 10
Match: AT5G55980.1 (serine-rich protein-related )

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-10
Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 101 RMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSD-LAQKSGAMDD 156
           R +   S +LNCLCSPTTH GSFRCR HR  +++R GS+GSNL+  L+ KS    D
Sbjct: 53  RSSSGKSTRLNCLCSPTTHAGSFRCRYHRVDSLTRAGSIGSNLAVLLSSKSSRFSD 108

[Close]

BLAST of CmUC10G186170 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 41/85 (48.24%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 75  KTAVAESELDDLKKTAHMLMSPTALS---------RMTKSPSVKLNCLCSPTTHIGSFRC 134
           K   A+   DD+K+     MSP              M+KS SV+ NCLC+PTTH GSFRC
Sbjct: 19  KETEADVSQDDIKRQEAYNMSPRVRRGGGGGGGSVGMSKSSSVRQNCLCAPTTHPGSFRC 78

Query: 135 RRHRSAA---ISRGGSVGSNLSDLA 148
           R HR  A   +SRG SV SNLS LA
Sbjct: 79  RYHRRNAGLGMSRGTSVPSNLSMLA 103

[Close]

BLAST of CmUC10G186170 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 4.3e-06
Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 0


Query: 99  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSV 140
           LSR T     K NCLCSPTTH GSFRCR HRS ++ R  S+
Sbjct: 33  LSRQTS--MTKTNCLCSPTTHPGSFRCRIHRSLSLQRTKSI 71

[Close]

BLAST of CmUC10G186170 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 48.9 bits (115), Expect = 4.3e-06
Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 0


Query: 99  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSV 140
           LSR T     K NCLCSPTTH GSFRCR HRS ++ R  S+
Sbjct: 33  LSRQTS--MTKTNCLCSPTTHPGSFRCRIHRSLSLQRTKSI 71

[Close]

BLAST of CmUC10G186170 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 8.0e-05
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 99  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNL 144
           LSR T     K  C+CSPTTH GSF+C+ HR+ ++ R  SV +N+
Sbjct: 21  LSRQTS--ITKTICICSPTTHPGSFKCKLHRTPSLQRNKSVETNI 63

The following BLAST results are available for this feature:

BLAST of CmUC10G186170 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55991.1	5.3e-35	80.00	hypothetical protein Csa_011649 [Cucumis sativus]	[more]
TYK19387.1	9.1e-35	79.00	putative PGPS/D10 protein [Cucumis melo var. makuwa]	[more]
XP_022143490.1	2.9e-33	77.23	uncharacterized protein LOC111013367 [Momordica charantia]	[more]
KAG7015599.1	1.0e-22	64.29	hypothetical protein SDJN02_23235, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6577543.1	1.8e-22	64.29	hypothetical protein SDJN03_25117, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmUC10G186170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC10G186170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7C7	2.6e-35	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045050 PE=4 SV=1	[more]
A0A5D3D753	4.4e-35	79.00	Putative PGPS/D10 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1CNY2	1.4e-33	77.23	uncharacterized protein LOC111013367 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A5N6L3X1	2.7e-16	52.63	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_026425 PE=4 SV=1	[more]
W9SBP1	2.7e-16	54.26	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_020205 PE=4 SV=1	[more]

BLAST of CmUC10G186170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55980.1	4.9e-10	55.36	serine-rich protein-related	[more]
AT3G13227.1	2.4e-09	48.24	serine-rich protein-related	[more]
AT1G67910.1	4.3e-06	60.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67910.2	4.3e-06	60.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G24577.1	8.0e-05	48.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	PANTHER	PTHR33132:SF48	BNACNNG68960D PROTEIN	coord: 75..151
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 75..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G186170.1	CmUC10G186170.1	mRNA