CmUC10G184730 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGAATTTACGAATATCATTACAGTATCCATAAATATTAAAGAATTAAAATTTATAGTGAAAATGCAAAATGTTCAGTACCATCCTCTGAAAATAGAGTGACGTGTCCAATTTTATGTAGTGTAAGGGTAGGTAGCATGGAAAAATGAATACACTCACAGGTAAGACTAGATTAGCCCTAAAACTTTCTCTCTTCTTTCCCTTTATATATGAATCCTCTTCCCCAATCTTTTCCCTCGCTTCAATCTTTCTCCTTCTTCTGCTTCAATTTCTTCCAGCTATGGCTGCCGCACGTGCCATGCTCGTGCTCGCCCTATCTCTTCTTGCTCTTTCTTCCTCTTCCATTGCTCAATCTCCCTCCCCTGCTCCAGGTCCCGCCTCCGCCGCCGCACCGCCGCCTTCAACCCCTCCGCCGGTTGCACCTCCCCCGATGACACCGCCCCCTGTAGCCTCACCGCCGCCAAGCATCTCAAATCCACCGGCGGCGGCTCCTCCCGCCATCCCACCGATGATAGCTTCTCCACCGCCTATGGAATCAAGCCCAGGCCCAGGCCCAATGCCCGACAGCCCACCATCACCTCCAGGCCCAAGTTCAAGCCCAATGTCTCCGCCGTCTCCAGCGTCAGCTCCGTCGCCGCCATCACCTCCGCCGCCGGGCGGGGGATTTTCTATCCACCAGGGTGGGTACAAGGCGGCTGTTGCGGCGGTGTTGGGTGGCCTGGCCGTCGTCCTGGTTTAACACTTGAATTTGGTGTAGATTATTATTATTATGAGCTCCATACTCATTTGTGTATTCTTTTTTCTTTTTATTTCTTCATCATTTCCATCTCTTGAGAGCAGCCTGAGTGATATTTGTGGGATTTGTTAGCATTTTCATTTTTTTTCTAGCTGAATAAGAGAGACTTGTTTCTTGTTCATGGTTTCATAATAATTTAGTCAATTATACATTTAATCCTAATACCCATCTATTAAGAGAGAAAATAAATAAATAAATAAATAAATAAATAAA CTGGAATTTACGAATATCATTACAGTATCCATAAATATTAAAGAATTAAAATTTATAGTGAAAATGCAAAATGTTCAGTACCATCCTCTGAAAATAGAGTGACGTGTCCAATTTTATGTAGTGTAAGGGTAGGTAGCATGGAAAAATGAATACACTCACAGGTAAGACTAGATTAGCCCTAAAACTTTCTCTCTTCTTTCCCTTTATATATGAATCCTCTTCCCCAATCTTTTCCCTCGCTTCAATCTTTCTCCTTCTTCTGCTTCAATTTCTTCCAGCTATGGCTGCCGCACGTGCCATGCTCGTGCTCGCCCTATCTCTTCTTGCTCTTTCTTCCTCTTCCATTGCTCAATCTCCCTCCCCTGCTCCAGGTCCCGCCTCCGCCGCCGCACCGCCGCCTTCAACCCCTCCGCCGGTTGCACCTCCCCCGATGACACCGCCCCCTGTAGCCTCACCGCCGCCAAGCATCTCAAATCCACCGGCGGCGGCTCCTCCCGCCATCCCACCGATGATAGCTTCTCCACCGCCTATGGAATCAAGCCCAGGCCCAGGCCCAATGCCCGACAGCCCACCATCACCTCCAGGCCCAAGTTCAAGCCCAATGTCTCCGCCGTCTCCAGCGTCAGCTCCGTCGCCGCCATCACCTCCGCCGCCGGGCGGGGGATTTTCTATCCACCAGGGTGGGTACAAGGCGGCTGTTGCGGCGGTGTTGGGTGGCCTGGCCGTCGTCCTGGTTTAACACTTGAATTTGGTGTAGATTATTATTATTATGAGCTCCATACTCATTTGTGTATTCTTTTTTCTTTTTATTTCTTCATCATTTCCATCTCTTGAGAGCAGCCTGAGTGATATTTGTGGGATTTGTTAGCATTTTCATTTTTTTTCTAGCTGAATAAGAGAGACTTGTTTCTTGTTCATGGTTTCATAATAATTTAGTCAATTATACATTTAATCCTAATACCCATCTATTAAGAGAGAAAATAAATAAATAAATAAATAAATAAATAAA ATGAATACACTCACAGGTAAGACTAGATTAGCCCTAAAACTTTCTCTCTTCTTTCCCTTTATATATGAATCCTCTTCCCCAATCTTTTCCCTCGCTTCAATCTTTCTCCTTCTTCTGCTTCAATTTCTTCCAGCTATGGCTGCCGCACGTGCCATGCTCGTGCTCGCCCTATCTCTTCTTGCTCTTTCTTCCTCTTCCATTGCTCAATCTCCCTCCCCTGCTCCAGGTCCCGCCTCCGCCGCCGCACCGCCGCCTTCAACCCCTCCGCCGGTTGCACCTCCCCCGATGACACCGCCCCCTGTAGCCTCACCGCCGCCAAGCATCTCAAATCCACCGGCGGCGGCTCCTCCCGCCATCCCACCGATGATAGCTTCTCCACCGCCTATGGAATCAAGCCCAGGCCCAGGCCCAATGCCCGACAGCCCACCATCACCTCCAGGCCCAAGTTCAAGCCCAATGTCTCCGCCGTCTCCAGCGTCAGCTCCGTCGCCGCCATCACCTCCGCCGCCGGGCGGGGGATTTTCTATCCACCAGGGTGGGTACAAGGCGGCTGTTGCGGCGGTGTTGGGTGGCCTGGCCGTCGTCCTGGTTTAA MNTLTGKTRLALKLSLFFPFIYESSSPIFSLASIFLLLLLQFLPAMAAARAMLVLALSLLALSSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGPMPDSPPSPPGPSSSPMSPPSPASAPSPPSPPPPGGGFSIHQGGYKAAVAAVLGGLAVVLV Homology
BLAST of CmUC10G184730 vs. NCBI nr
Match: XP_038903480.1 (classical arabinogalactan protein 9-like [Benincasa hispida]) HSP 1 Score: 198.7 bits (504), Expect = 4.5e-47 Identity = 135/154 (87.66%), Postives = 140/154 (90.91%), Query Frame = 0
BLAST of CmUC10G184730 vs. NCBI nr
Match: XP_022923372.1 (classical arabinogalactan protein 9-like [Cucurbita moschata]) HSP 1 Score: 154.5 bits (389), Expect = 9.8e-34 Identity = 119/161 (73.91%), Postives = 128/161 (79.50%), Query Frame = 0
BLAST of CmUC10G184730 vs. NCBI nr
Match: XP_023553563.1 (classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154.5 bits (389), Expect = 9.8e-34 Identity = 122/162 (75.31%), Postives = 130/162 (80.25%), Query Frame = 0
BLAST of CmUC10G184730 vs. NCBI nr
Match: KAG6596882.1 (hypothetical protein SDJN03_10062, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 78.2 bits (191), Expect = 8.9e-11 Identity = 84/151 (55.63%), Postives = 90/151 (59.60%), Query Frame = 0
BLAST of CmUC10G184730 vs. NCBI nr
Match: KAG6599445.1 (Leucine-rich repeat extensin-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 56.6 bits (135), Expect = 2.8e-04 Identity = 56/101 (55.45%), Postives = 64/101 (63.37%), Query Frame = 0
BLAST of CmUC10G184730 vs. ExPASy TrEMBL
Match: A0A0A0L458 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017230 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35 Identity = 123/157 (78.34%), Postives = 130/157 (82.80%), Query Frame = 0
BLAST of CmUC10G184730 vs. ExPASy TrEMBL
Match: A0A6J1E5X6 (classical arabinogalactan protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111431090 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 4.8e-34 Identity = 119/161 (73.91%), Postives = 128/161 (79.50%), Query Frame = 0
BLAST of CmUC10G184730 vs. ExPASy TrEMBL
Match: A0A6P9F4J7 (basic proline-rich protein-like OS=Zalophus californianus OX=9704 GN=LOC118356431 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-04 Identity = 62/118 (52.54%), Postives = 74/118 (62.71%), Query Frame = 0
BLAST of CmUC10G184730 vs. ExPASy TrEMBL
Match: A0A7S2C4D7 (Hypothetical protein (Fragment) OS=Haptolina brevifila OX=156173 GN=CBRE1094_LOCUS6081 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 5.1e-04 Identity = 56/103 (54.37%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of CmUC10G184730 vs. ExPASy TrEMBL
Match: Q4A2B5 (Putative membrane protein OS=Emiliania huxleyi virus 86 (isolate United Kingdom/English Channel/1999) OX=654925 GN=EhV364 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 6.7e-04 Identity = 56/108 (51.85%), Postives = 65/108 (60.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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