CmUC10G184390 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G184390
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Vacuolar protein sorting 55 (VPS55) family protein
Location	CmU531Chr10: 2053728 .. 2056293 (+)
RNA-Seq Expression	CmUC10G184390
Synteny	CmUC10G184390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTTTGAGTAACAATGTAACTCAATGAAGAATCCTACATGAATTCTTTTGTATCGCTGTGTTAAGTTTAAGGACAGAGGAGTTGAATTCTTGTGGGAGGAGTTACTTCGATTTTCATTGTTCATGAAGCATTTCAGTTGTAAATGTTCATAAACCATATTTATATTCACTAGATTGGTTTGGTGATTTTGACGTTCGATTTGAAGCTGGAAATGTTTGCCATATTGGTTGTCAATATCAAAATTTTCAAGTCCCTTCTGCCAATTTTTACTCTGTCCTTGTGTAGATGGGTGTTTGAGTAACAATGCCACTCAATGAAGAATTATATAACTCAAAAATACCAATTTATATGTAAAACCGATGCACTTACGAAAATCAACTTTGTGTTCTTTGCCTCCCACTTATCCTCTTGTAGACTTCTCATTTGGAGTTCTTTTTTGTAGCTTTTGACCTAAATGAGGTGAGCATCCAACCAATGGCAGACTTACCAGGTTCTTTGCAGGCCTGTTTGAGTATGGGGAAAGTGGCATTCTTGGCAATTTTGGTTTCTGGAGGAATTGTGATGCAGATATTGGTCAGTAGAGTCTCTTCGGAAACATTTGATTCTTTGAACAATGTCTTTATACTTCTTGGCTTTAAAAGTCATTTTTGTTATCTCATTTATCATGTGCTATGACAGGCATGCGCCTTGTACAATAATTGGTGGCCAATGCTAAGTGGTATATGACTAAAATTTCTCCTGGATCCTCTTTTACCTTTTACAACATGACGTTTCTTTGCAGCTAAGTTTTTTTTATTTTTTTTTATTTCATATCTTATTTGCTGGACTTGCTATACTGATTTTATTTCTGCCTGTACTGTGGGTGTATGTTTTCCATCCACTTAACTTCTGTTTATATGCAGTATCTTTTAATAATGAGCTTTTTTAGTTACTTTGATTGAATTGCATGGCTAGCTAGAACTAGAAGTGCTTCTCATCTCCATTGTGCTCCACTTGAAACTCTCTTTCTAGTTTCTAGCATTTTTATTGGACATGACTCGCATAATGAAAGAGTAAGGGTTTTGAATTGTTCTTATACAACCAACCCCTCATCCAGAGATGGTTGAAAGGTTGAAATTCAAACCGTTGAATGATAACCAAAGGACAATCCATTTTATTTCCCTGTGTCTCTCTCCTTTTTTCTTTTCTTTTCTTTTTTTTTCTCTCTCTCTCTTTTTAATTATAAAATGATTTCCTATTAATTATACTAAAACAGTTCAATAAATTCTGAGACTAAACATTTATGGAGATCAAAATTTTAATCAAAATGATCCATACCATTTGACTGCTACTTGTTACCACAATTTTTATATAGTGATTGTATCGATGGTGTATCACTATAGGCCTTAGCCTCAATTTTATTTATCAACAGCAATGGCAAGATTCAAGAGCTCCCAACCTCCCAATTCTCATAAGAGAACCCAATTACAGAGCATAGCCAAAAAGATACCCCCTCAAAGCAAAACAGTTTGTATATTGTAAACGTTTCATATTTCTAACACTAAGGCCCCTAATAAACAATATTCTTAGGGCCCACACTAAACAAACCTACCTTACCTCACCTTTAGATTCTGTATAATGAGTATGACATAGTCTTTACTCTTTAGAATCTGACATCCCCTTAGTCTCACCAGTTTACATAGTGTATAATGATTTTGACATAATCATCCTGTTTCGATTCAAAAACCCAACTTGAATTTAATATGTTGAACATACATGGATGTTGTGTATATATAATATAGGTTAAATTGCAAATTTGGTCCATATGGTCAGGAGAAGTTGAAATTTAAGGTCTATGATTTGATAAAATATTCATAAATAGAGGACTATCAATGAGATTTTATAGAACCATAAGGTCTAAATTCTAACTTTTAAAATCATAGGGATTAAATCTAACTCTCTCCGAGCCAAGTTTGACCTATATATATATGTATTTTCTTTGTTATGCTTTAATCCAGGTCAGAAGATATATATTTTTCTTGACTAATTTCATGACATCATTCTTTGCAGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTATTCTTTGCGGGGTCAGATAGTTCTTCACTGTATTCTGATTCTAACGATAGGTTTGACTTTTGCCTCTGTAACCCATTTGATAAGTGTTTTTAATCAGTTGAAAACAGTAATTTTAAGATATTGAAAGATTGCCCAAAACAAACTTTTGTATTCATAAAATTCACGTACTCTTCCCCTTCTCCCCACATATCATTATCATTGAGACAGCTGGATCAACGCGACGAAATTCTTGACCGGAGCTTCGACTGTAGGAAGCATTGCCATCCCCATCATTCTGAAGCATGCCGGGATCATTGGCTGGGGGGCGATGGCAATGGACCTCTCATCGTTTGTGGTATTCGTGATTGCCATTTTGTGTTTCATGGGGATGAGCGAAGACAACGACTACACTATGTTCTGAGATACTCCATCTCCATGGCAATGAAGCTGTGCTATCTCCATCAGGTGAGGCTTCTGGCTCTGTTCATTCTTGTCTGA

mRNA sequence

ATGGCTTTTGACCTAAATGAGGTGAGCATCCAACCAATGGCAGACTTACCAGGTTCTTTGCAGGCCTGTTTGAGTATGGGGAAAGTGGCATTCTTGGCAATTTTGGTTTCTGGAGGAATTGTGATGCAGATATTGGTCAGTAGAGTCTCTTCGGAAACATTTGATTCTTTGAACAATGTCTTTATACTTCTTGGCTTTAAAAGTCATTTTTGTTATCTCATTTATCATGCATGCGCCTTGTACAATAATTGGTGGCCAATGCTAAGTGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTATTCTTTGCGGGGTCAGATAGTTCTTCACTGTATTCTGATTCTAACGATAGGTTTGACTTTTGCCTCTGTAACCCATTTGATAATAATTTTAAGATATTGAAAGATTGCCCAAAACAAACTTTTGTATTCATAAAATTCACGTACTCTTCCCCTTCTCCCCACATATCATTATCATTGAGACAGCTGGATCAACGCGACGAAATTCTTGACCGGAGCTTCGACTGTAGGAAGCATTGCCATCCCCATCATTCTGAAGCATGCCGGGATCATTGGCTGGGGGGCGATGGCAATGGACCTCTCATCGTTTGTGGTATTCGTGATTGCCATTTTGTGTTTCATGGGGATGAGCGAAGACAACGACTACACTATGTTCTGAGATACTCCATCTCCATGGCAATGAAGCTGTGCTATCTCCATCAGGTGAGGCTTCTGGCTCTGTTCATTCTTGTCTGA

Coding sequence (CDS)

ATGGCTTTTGACCTAAATGAGGTGAGCATCCAACCAATGGCAGACTTACCAGGTTCTTTGCAGGCCTGTTTGAGTATGGGGAAAGTGGCATTCTTGGCAATTTTGGTTTCTGGAGGAATTGTGATGCAGATATTGGTCAGTAGAGTCTCTTCGGAAACATTTGATTCTTTGAACAATGTCTTTATACTTCTTGGCTTTAAAAGTCATTTTTGTTATCTCATTTATCATGCATGCGCCTTGTACAATAATTGGTGGCCAATGCTAAGTGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTATTCTTTGCGGGGTCAGATAGTTCTTCACTGTATTCTGATTCTAACGATAGGTTTGACTTTTGCCTCTGTAACCCATTTGATAATAATTTTAAGATATTGAAAGATTGCCCAAAACAAACTTTTGTATTCATAAAATTCACGTACTCTTCCCCTTCTCCCCACATATCATTATCATTGAGACAGCTGGATCAACGCGACGAAATTCTTGACCGGAGCTTCGACTGTAGGAAGCATTGCCATCCCCATCATTCTGAAGCATGCCGGGATCATTGGCTGGGGGGCGATGGCAATGGACCTCTCATCGTTTGTGGTATTCGTGATTGCCATTTTGTGTTTCATGGGGATGAGCGAAGACAACGACTACACTATGTTCTGAGATACTCCATCTCCATGGCAATGAAGCTGTGCTATCTCCATCAGGTGAGGCTTCTGGCTCTGTTCATTCTTGTCTGA

Protein sequence

MAFDLNEVSIQPMADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCYLIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSNDRFDFCLCNPFDNNFKILKDCPKQTFVFIKFTYSSPSPHISLSLRQLDQRDEILDRSFDCRKHCHPHHSEACRDHWLGGDGNGPLIVCGIRDCHFVFHGDERRQRLHYVLRYSISMAMKLCYLHQVRLLALFILV

Homology

[Close]

BLAST of CmUC10G184390 vs. NCBI nr
Match: KAG7015678.1 (Vacuolar protein sorting-associated protein 55-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 3.9e-35
Identity = 107/241 (44.40%), Postives = 112/241 (46.47%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLPGSLQACLSMGKVAFLAILVSGGIV+QIL                           
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSNDRFDFCLCNPFDNNFK 132
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 133 ILKDCPKQTFVFIKFTYSSPSPHISLSLRQLDQRDEILDRSFDCRKHCHPHHSEACRDHW 192
                                         LDQ DEILDRS D RKHCHPHHSEAC DH 
Sbjct: 121 ------------------------------LDQCDEILDRSLDDRKHCHPHHSEACGDHR 124

Query: 193 LGGDGNGPLIVCGIRDCHFVFHGDERRQRLHYVLRYSISMAM--KLCYLHQVRLLALFIL 252
           LGG+GNGPL+V  IRDCHFVFHGDERR+RLH+VLRY ISMAM  KLCYLH VRLL LFIL
Sbjct: 181 LGGNGNGPLVVRSIRDCHFVFHGDERRRRLHHVLRYCISMAMKLKLCYLHLVRLLVLFIL 124

[Close]

BLAST of CmUC10G184390 vs. NCBI nr
Match: XP_038906097.1 (vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida] >XP_038906098.1 vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida])

HSP 1 Score: 127.1 bits (318), Expect = 2.1e-25
Identity = 72/105 (68.57%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLPGSLQACLSMGKVAFLAILVSGGIVMQIL                           
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVMQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLY+DSN+
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNN 74

[Close]

BLAST of CmUC10G184390 vs. NCBI nr
Match: XP_022923424.1 (vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata] >XP_022923425.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata] >XP_023553141.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita pepo subsp. pepo] >XP_023553142.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita pepo subsp. pepo] >XP_023553143.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.9 bits (315), Expect = 4.8e-25
Identity = 71/105 (67.62%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLPGSLQACLSMGKVAFLAILVSGGIV+QIL                           
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLY+DS+D
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSSD 74

[Close]

BLAST of CmUC10G184390 vs. NCBI nr
Match: XP_022965211.1 (vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima] >XP_022965212.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima] >XP_022965213.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima] >XP_022965214.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima])

HSP 1 Score: 125.6 bits (314), Expect = 6.2e-25
Identity = 71/105 (67.62%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLPGSLQACLSMGKVAFLAILVSGGIV+QIL                           
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLY+DS D
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSTD 74

[Close]

BLAST of CmUC10G184390 vs. NCBI nr
Match: XP_004150170.1 (vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031739448.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031739449.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >KGN55797.1 hypothetical protein Csa_009853 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 8.1e-25
Identity = 71/105 (67.62%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLP SLQACL MGKVAFLAILVSGGIVMQIL                           
Sbjct: 1   MADLPASLQACLGMGKVAFLAILVSGGIVMQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLY+DSND
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSND 74

[Close]

BLAST of CmUC10G184390 vs. ExPASy Swiss-Prot
Match: Q9AST6 (Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana OX=3702 GN=At1g32410 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MAD+PG L+ CL MGK+AFLAILVS GIV+QIL                           
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+++S++
Sbjct: 61  ----ACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDN 74

[Close]

BLAST of CmUC10G184390 vs. ExPASy TrEMBL
Match: A0A6J1E6D1 (vacuolar protein sorting-associated protein 55 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431123 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25
Identity = 71/105 (67.62%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLPGSLQACLSMGKVAFLAILVSGGIV+QIL                           
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLY+DS+D
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSSD 74

[Close]

BLAST of CmUC10G184390 vs. ExPASy TrEMBL
Match: A0A6J1HL31 (vacuolar protein sorting-associated protein 55 homolog OS=Cucurbita maxima OX=3661 GN=LOC111465136 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-25
Identity = 71/105 (67.62%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLPGSLQACLSMGKVAFLAILVSGGIV+QIL                           
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLY+DS D
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSTD 74

[Close]

BLAST of CmUC10G184390 vs. ExPASy TrEMBL
Match: A0A0A0L5B3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G016420 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.9e-25
Identity = 71/105 (67.62%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLP SLQACL MGKVAFLAILVSGGIVMQIL                           
Sbjct: 1   MADLPASLQACLGMGKVAFLAILVSGGIVMQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLY+DSND
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSND 74

[Close]

BLAST of CmUC10G184390 vs. ExPASy TrEMBL
Match: A0A1S3BJT4 (vacuolar protein sorting-associated protein 55 homolog OS=Cucumis melo OX=3656 GN=LOC103490815 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.7e-25
Identity = 71/105 (67.62%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLP SLQACL MGKVAFLAILVSGGIVMQIL                           
Sbjct: 1   MADLPPSLQACLGMGKVAFLAILVSGGIVMQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLY+DSND
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSND 74

[Close]

BLAST of CmUC10G184390 vs. ExPASy TrEMBL
Match: A0A6J1DML0 (vacuolar protein sorting-associated protein 55 homolog OS=Momordica charantia OX=3673 GN=LOC111022633 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.7e-25
Identity = 70/105 (66.67%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MADLPGSLQAC SMGKVAFLAILVSGGIVMQIL                           
Sbjct: 1   MADLPGSLQACFSMGKVAFLAILVSGGIVMQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACALYNNWWPMLSVIMYVLLPMPLLFF GSDSSSLY++SND
Sbjct: 61  ----ACALYNNWWPMLSVIMYVLLPMPLLFFGGSDSSSLYTESND 74

[Close]

BLAST of CmUC10G184390 vs. TAIR 10
Match: AT1G32410.1 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-23
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MAD+PG L+ CL MGK+AFLAILVS GIV+QIL                           
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+++S++
Sbjct: 61  ----ACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDN 74

[Close]

BLAST of CmUC10G184390 vs. TAIR 10
Match: AT1G32410.2 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-23
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MAD+PG L+ CL MGK+AFLAILVS GIV+QIL                           
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+++S++
Sbjct: 61  ----ACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDN 74

[Close]

BLAST of CmUC10G184390 vs. TAIR 10
Match: AT1G32410.3 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-23
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MAD+PG L+ CL MGK+AFLAILVS GIV+QIL                           
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+++S++
Sbjct: 61  ----ACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDN 74

[Close]

BLAST of CmUC10G184390 vs. TAIR 10
Match: AT1G32410.4 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-23
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MAD+PG L+ CL MGK+AFLAILVS GIV+QIL                           
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+++S++
Sbjct: 61  ----ACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDN 74

[Close]

BLAST of CmUC10G184390 vs. TAIR 10
Match: AT1G32410.5 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-23
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 13  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILVSRVSSETFDSLNNVFILLGFKSHFCY 72
           MAD+PG L+ CL MGK+AFLAILVS GIV+QIL                           
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQIL--------------------------- 60

Query: 73  LIYHACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYSDSND 118
               ACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+++S++
Sbjct: 61  ----ACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDN 74

The following BLAST results are available for this feature:

BLAST of CmUC10G184390 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015678.1	3.9e-35	44.40	Vacuolar protein sorting-associated protein 55-like protein [Cucurbita argyrospe...	[more]
XP_038906097.1	2.1e-25	68.57	vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida] >XP_0...	[more]
XP_022923424.1	4.8e-25	67.62	vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata] >XP_...	[more]
XP_022965211.1	6.2e-25	67.62	vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima] >XP_02...	[more]
XP_004150170.1	8.1e-25	67.62	vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031...	[more]

BLAST of CmUC10G184390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AST6	1.1e-21	55.24	Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana O...	[more]

BLAST of CmUC10G184390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6D1	2.3e-25	67.62	vacuolar protein sorting-associated protein 55 homolog OS=Cucurbita moschata OX=...	[more]
A0A6J1HL31	3.0e-25	67.62	vacuolar protein sorting-associated protein 55 homolog OS=Cucurbita maxima OX=36...	[more]
A0A0A0L5B3	3.9e-25	67.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G016420 PE=3 SV=1	[more]
A0A1S3BJT4	6.7e-25	67.62	vacuolar protein sorting-associated protein 55 homolog OS=Cucumis melo OX=3656 G...	[more]
A0A6J1DML0	6.7e-25	66.67	vacuolar protein sorting-associated protein 55 homolog OS=Momordica charantia OX...	[more]

BLAST of CmUC10G184390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32410.1	8.1e-23	55.24	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.2	8.1e-23	55.24	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.3	8.1e-23	55.24	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.4	8.1e-23	55.24	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.5	8.1e-23	55.24	Vacuolar protein sorting 55 (VPS55) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007262	Vps55/LEPROT	PFAM	PF04133	Vps55	coord: 73..114 e-value: 4.4E-10 score: 39.5
IPR007262	Vps55/LEPROT	PANTHER	PTHR12050	LEPTIN RECEPTOR-RELATED	coord: 76..119 coord: 13..52
None	No IPR available	PANTHER	PTHR12050:SF1	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG	coord: 76..119 coord: 13..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G184390.1	CmUC10G184390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity